Cmc05g0125461 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0125461
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr05: 2535224 .. 2536746 (-)
RNA-Seq Expression	Cmc05g0125461
Synteny	Cmc05g0125461

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAAAAGGATATTCCAAAAACAGCATTTAGAACTCATGAGGGACATTATGAGTTCCTCATCATGCCATTTGGTTTGACTAATGCATCGGCCACATTCCAAGCTTTGATGAATGTTGTTTTCAAACCTTACTTGAGGAAGTTTGTTTTGGTGTTTTTTGATGATATATTGGTCTACAGCAAGAACGAAGATGAGCATGTAGTTCACTTGGGGAAAGTTCTTTCTTCGTTGAGGGAACATTCGTTATATGCTAATAAGAAGTGCAGCTTTGCACAACCGAAGATTGAGTATCTGGGACACATTATATCAGGAGGGGGAGTTGAGGTAGACCCAGAGAAGATTCGTTCTATTGTTGATTGGCCCACACCAACGAATGTTAGAGAAATCCGTGGATTTCTTGGCTTAACTGGTTATTATAGGCGATTTGTTAAGCATTATGGTTCTATAGCAGCACCATTGATCCAATTGCTCAAGAAAGGAGGATTTGTGTGGAATAAAGAGGCTGAAGAGGCGTTTGAAAGATTGAAGAGTGCCATGATCTCATTGCCAGTGTTAGCTCTTCCAAACTTTGAACAACCCTTCGAGATAGAAACAGATGCTTTAGGGGTTGGAGTGGATGCTGTTTTAACACGGATGAACAAGCCTATTGCGTTTTATAGTCATACATTGGCTATGTGGGATAGGGCAAAACCAGTTTACGAAAGGGAACTGATGGCTGTCATACTTGTCCAATGCTGGCGTCCTTACTTGTTCGGGACGAGATTTATGGTTAAAATTGATCAGAAATCACTCAAGTTTCTCTTAGAACAGAGAACAATTCAACCACAATATCAGAAATGGGTAGCCAAGTTGCTTGGATATTCGTTTGAAGTAATATATAAACCGGGTTTGGAAAATAAGGTAGCTGACGCATTGTCCAGGAAACTGATGGAGATTTAGGGTTTAGGGTTTAGGGTTCAGTTCCTATCCTAGTAGATCTCATTATTATTAAAGAAGAAGTACAGAAGGATGAGGAATTACAAAAGGCTTTTGAGAATGAGCAAACAGATACTATTAAGAAGAATACAAAATTTTCACAGAAAAATAGTATATGGCATTATAAGGATCGCTTGGTCTTATCAAGGACCTCAAAATTAATTCCAACTATGCTAAATACTTTTCACGACTTGGTTGTGGGAGGACATTCTGGTTTCTTGCGTACTTATAAGCGATTAGCAAGTGAGTTATATTGGCCGGGAATGAAGAAAGATGTTCAGAAGTATTGTGAGGAATGTGTAGTTTGTCAACGAAACAAGACCGTGGCTTTATCTCCAGCTGGTCTTTTAATTCCTCTGGAAATTCCTCAGCAGGTTTGGAATGACATCTCTATGGATTTTGTTAAGGGATTTGAAGTGGTGTTAGTGGTGGTGGATCGGCTAAGTAAATACAACCACTTTATACCGCTCAAACATCCTTATACAGCCAAAACAGTAGCTGAAGTGTTTGTCAGAGAGATAGTTCGATTGCATGGTTTTCCTTAA

mRNA sequence

ATGGTGGAAAAGGATATTCCAAAAACAGCATTTAGAACTCATGAGGGACATTATGAGTTCCTCATCATGCCATTTGGTTTGACTAATGCATCGGCCACATTCCAAGCTTTGATGAATGTTGTTTTCAAACCTTACTTGAGGAAGTTTGTTTTGGTGTTTTTTGATGATATATTGGTCTACAGCAAGAACGAAGATGAGCATGTAGTTCACTTGGGGAAAGTTCTTTCTTCGTTGAGGGAACATTCGTTATATGCTAATAAGAAGTGCAGCTTTGCACAACCGAAGATTGAGTATCTGGGACACATTATATCAGGAGGGGGAGTTGAGGTAGACCCAGAGAAGATTCGTTCTATTGTTGATTGGCCCACACCAACGAATGTTAGAGAAATCCGTGGATTTCTTGGCTTAACTGGTTATTATAGGCGATTTGTTAAGCATTATGGTTCTATAGCAGCACCATTGATCCAATTGCTCAAGAAAGGAGGATTTGTGTGGAATAAAGAGGCTGAAGAGGCGTTTGAAAGATTGAAGAGTGCCATGATCTCATTGCCAGTGTTAGCTCTTCCAAACTTTGAACAACCCTTCGAGATAGAAACAGATGCTTTAGGGGTTGGAGTGGATGCTGTTTTAACACGGATGAACAAGCCTATTGCGTTTTATAGTCATACATTGGCTATGTGGGATAGGGCAAAACCAGTTTACGAAAGGGAACTGATGGCTGTCATACTTGTCCAATGCTGGCGTCCTTACTTGTTCGGGACGAGATTTATGGTTAAAATTGATCAGAAATCACTCAAGTTTCTCTTAGAACAGAGAACAATTCAACCACAATATCAGAAATGGGTAGCCAAGTTGCTTGGATATTCGTTTGAAGTAATATATAAACCGGGTTTGGAAAATAAGAAGGATGAGGAATTACAAAAGGCTTTTGAGAATGAGCAAACAGATACTATTAAGAAGAATACAAAATTTTCACAGAAAAATAGTATATGGCATTATAAGGATCGCTTGGTCTTATCAAGGACCTCAAAATTAATTCCAACTATGCTAAATACTTTTCACGACTTGGTTGTGGGAGGACATTCTGGTTTCTTGCGTACTTATAAGCGATTAGCAAGTGAGTTATATTGGCCGGGAATGAAGAAAGATGTTCAGAAGTATTGTGAGGAATGTGTAGTTTGTCAACGAAACAAGACCGTGGCTTTATCTCCAGCTGGTCTTTTAATTCCTCTGGAAATTCCTCAGCAGGTTTGGAATGACATCTCTATGGATTTTGTTAAGGGATTTGAAGTGGTGTTAGTGGTGGTGGATCGGCTAAGTAAATACAACCACTTTATACCGCTCAAACATCCTTATACAGCCAAAACAGTAGCTGAAGTGTTTGTCAGAGAGATAGTTCGATTGCATGGTTTTCCTTAA

Coding sequence (CDS)

ATGGTGGAAAAGGATATTCCAAAAACAGCATTTAGAACTCATGAGGGACATTATGAGTTCCTCATCATGCCATTTGGTTTGACTAATGCATCGGCCACATTCCAAGCTTTGATGAATGTTGTTTTCAAACCTTACTTGAGGAAGTTTGTTTTGGTGTTTTTTGATGATATATTGGTCTACAGCAAGAACGAAGATGAGCATGTAGTTCACTTGGGGAAAGTTCTTTCTTCGTTGAGGGAACATTCGTTATATGCTAATAAGAAGTGCAGCTTTGCACAACCGAAGATTGAGTATCTGGGACACATTATATCAGGAGGGGGAGTTGAGGTAGACCCAGAGAAGATTCGTTCTATTGTTGATTGGCCCACACCAACGAATGTTAGAGAAATCCGTGGATTTCTTGGCTTAACTGGTTATTATAGGCGATTTGTTAAGCATTATGGTTCTATAGCAGCACCATTGATCCAATTGCTCAAGAAAGGAGGATTTGTGTGGAATAAAGAGGCTGAAGAGGCGTTTGAAAGATTGAAGAGTGCCATGATCTCATTGCCAGTGTTAGCTCTTCCAAACTTTGAACAACCCTTCGAGATAGAAACAGATGCTTTAGGGGTTGGAGTGGATGCTGTTTTAACACGGATGAACAAGCCTATTGCGTTTTATAGTCATACATTGGCTATGTGGGATAGGGCAAAACCAGTTTACGAAAGGGAACTGATGGCTGTCATACTTGTCCAATGCTGGCGTCCTTACTTGTTCGGGACGAGATTTATGGTTAAAATTGATCAGAAATCACTCAAGTTTCTCTTAGAACAGAGAACAATTCAACCACAATATCAGAAATGGGTAGCCAAGTTGCTTGGATATTCGTTTGAAGTAATATATAAACCGGGTTTGGAAAATAAGAAGGATGAGGAATTACAAAAGGCTTTTGAGAATGAGCAAACAGATACTATTAAGAAGAATACAAAATTTTCACAGAAAAATAGTATATGGCATTATAAGGATCGCTTGGTCTTATCAAGGACCTCAAAATTAATTCCAACTATGCTAAATACTTTTCACGACTTGGTTGTGGGAGGACATTCTGGTTTCTTGCGTACTTATAAGCGATTAGCAAGTGAGTTATATTGGCCGGGAATGAAGAAAGATGTTCAGAAGTATTGTGAGGAATGTGTAGTTTGTCAACGAAACAAGACCGTGGCTTTATCTCCAGCTGGTCTTTTAATTCCTCTGGAAATTCCTCAGCAGGTTTGGAATGACATCTCTATGGATTTTGTTAAGGGATTTGAAGTGGTGTTAGTGGTGGTGGATCGGCTAAGTAAATACAACCACTTTATACCGCTCAAACATCCTTATACAGCCAAAACAGTAGCTGAAGTGTTTGTCAGAGAGATAGTTCGATTGCATGGTTTTCCTTAA

Protein sequence

MVEKDIPKTAFRTHEGHYEFLIMPFGLTNASATFQALMNVVFKPYLRKFVLVFFDDILVYSKNEDEHVVHLGKVLSSLREHSLYANKKCSFAQPKIEYLGHIISGGGVEVDPEKIRSIVDWPTPTNVREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVLALPNFEQPFEIETDALGVGVDAVLTRMNKPIAFYSHTLAMWDRAKPVYERELMAVILVQCWRPYLFGTRFMVKIDQKSLKFLLEQRTIQPQYQKWVAKLLGYSFEVIYKPGLENKKDEELQKAFENEQTDTIKKNTKFSQKNSIWHYKDRLVLSRTSKLIPTMLNTFHDLVVGGHSGFLRTYKRLASELYWPGMKKDVQKYCEECVVCQRNKTVALSPAGLLIPLEIPQQVWNDISMDFVKGFEVVLVVVDRLSKYNHFIPLKHPYTAKTVAEVFVREIVRLHGFP

Homology

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BLAST of Cmc05g0125461 vs. NCBI nr
Match: TYK24006.1 (Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 817.8 bits (2111), Expect = 4.9e-233
Identity = 416/513 (81.09%), Postives = 438/513 (85.38%), Query Frame = 0


Query: 1    MVEKDIPKTAFRTHEGHYEFLIMPFGLTNASATFQALMNVVFKPYLRKFVLVFFDDILVY 60
            MVEKDIPKTAFRTHEGHYEFL+MPFGLTNA ATFQ LMN VFKPYLRKFVLVFFDDILVY
Sbjct: 507  MVEKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQTLMNAVFKPYLRKFVLVFFDDILVY 566

Query: 61   SKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYLGHIISGGGVEVDPEKIRSIV 120
            SKNE++HVVHLGKVLSSLREHSLYAN KK SFAQ K+EYL HII GGGVEVDP+KIRSI 
Sbjct: 567  SKNEEDHVVHLGKVLSSLREHSLYANKKKGSFAQLKVEYLEHIILGGGVEVDPQKIRSIA 626

Query: 121  DWPTPTNVREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKGGFVWNKEAEEAFERLKSA 180
            DWPTPTNVRE RGFLGLT YYRRFVKHYGSIAAPL QLLKKGGFVWNKEA+EAFE+LKSA
Sbjct: 627  DWPTPTNVRETRGFLGLTSYYRRFVKHYGSIAAPLTQLLKKGGFVWNKEADEAFEQLKSA 686

Query: 181  MISLPVLALPNFEQPFEIETDALGVGVDAVLTRMNKPIAFYSHTLAMWDRAKPVYERELM 240
            MISLPVLALPNFE+PFEIETDA GVGV A+LT+MNKPIAFYSH LAM DRAKPVYERELM
Sbjct: 687  MISLPVLALPNFERPFEIETDASGVGVGALLTQMNKPIAFYSHKLAMRDRAKPVYERELM 746

Query: 241  AVIL-VQCWRPYLFGTRFMVKIDQKSLKFLLEQRTIQPQYQKWVAKLLGYSFEVIYKPGL 300
            AV+L VQ WRPYL G RF+VK DQKSLKFLLEQRTIQPQYQ WV KLLGYSFEVIYKPGL
Sbjct: 747  AVVLAVQRWRPYLLGARFVVKTDQKSLKFLLEQRTIQPQYQNWVTKLLGYSFEVIYKPGL 806

Query: 301  ENK---------------------------------KDEELQKAFENEQTDTIKKNTKFS 360
            ENK                                 KDE LQKA   EQT T K+N KFS
Sbjct: 807  ENKAADALLRKPIEIMNCRMTVSTLVDLATIKEEVEKDEILQKAIAKEQTYTNKRNIKFS 866

Query: 361  QKNSIWHYKDRLVLSRTSKLIPTMLNTFHDLVVGGHSGFLRTYKRLASELYWPGMKKDVQ 420
            QKN +W YK+RLVLS+TSKLIPTML+TFHD +VGGHSGFL+TYKRLASELYWPGMKKDVQ
Sbjct: 867  QKNDMWRYKNRLVLSKTSKLIPTMLHTFHDSMVGGHSGFLQTYKRLASELYWPGMKKDVQ 926

Query: 421  KYCEECVVCQRNKTVALSPAGLLIPLEIPQQVWNDISMDFV------KGFEVVLVVVDRL 473
            +YCEECVVCQRNKTVALSPAGLL PLE PQQVW+ ISMDFV      KGFEVVLVVVDRL
Sbjct: 927  EYCEECVVCQRNKTVALSPAGLLTPLETPQQVWSYISMDFVEGLPKAKGFEVVLVVVDRL 986

[Close]

BLAST of Cmc05g0125461 vs. NCBI nr
Match: KAA0061922.1 (Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 817.8 bits (2111), Expect = 4.9e-233
Identity = 416/513 (81.09%), Postives = 438/513 (85.38%), Query Frame = 0


Query: 1    MVEKDIPKTAFRTHEGHYEFLIMPFGLTNASATFQALMNVVFKPYLRKFVLVFFDDILVY 60
            MVEKDIPKTAFRTHEGHYEFL+MPFGLTNA ATFQ LMN VFKPYLRKFVLVFFDDILVY
Sbjct: 507  MVEKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQTLMNAVFKPYLRKFVLVFFDDILVY 566

Query: 61   SKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYLGHIISGGGVEVDPEKIRSIV 120
            SKNE++HVVHLGKVLSSLREHSLYAN KK SFAQ K+EYL HII GGGVEVDP+KIRSI 
Sbjct: 567  SKNEEDHVVHLGKVLSSLREHSLYANKKKGSFAQLKVEYLEHIILGGGVEVDPQKIRSIA 626

Query: 121  DWPTPTNVREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKGGFVWNKEAEEAFERLKSA 180
            DWPTPTNVRE RGFLGLT YYRRFVKHYGSIAAPL QLLKKGGFVWNKEA+EAFE+LKSA
Sbjct: 627  DWPTPTNVRETRGFLGLTSYYRRFVKHYGSIAAPLTQLLKKGGFVWNKEADEAFEQLKSA 686

Query: 181  MISLPVLALPNFEQPFEIETDALGVGVDAVLTRMNKPIAFYSHTLAMWDRAKPVYERELM 240
            MISLPVLALPNFE+PFEIETDA GVGV A+LT+MNKPIAFYSH LAM DRAKPVYERELM
Sbjct: 687  MISLPVLALPNFERPFEIETDASGVGVGALLTQMNKPIAFYSHKLAMRDRAKPVYERELM 746

Query: 241  AVIL-VQCWRPYLFGTRFMVKIDQKSLKFLLEQRTIQPQYQKWVAKLLGYSFEVIYKPGL 300
            AV+L VQ WRPYL G RF+VK DQKSLKFLLEQRTIQPQYQ WV KLLGYSFEVIYKPGL
Sbjct: 747  AVVLAVQRWRPYLLGARFVVKTDQKSLKFLLEQRTIQPQYQNWVTKLLGYSFEVIYKPGL 806

Query: 301  ENK---------------------------------KDEELQKAFENEQTDTIKKNTKFS 360
            ENK                                 KDE LQKA   EQT T K+N KFS
Sbjct: 807  ENKAADALLRKPIEIMNCRMTVSTLVDLATIKEEVEKDEILQKAIAKEQTYTNKRNIKFS 866

Query: 361  QKNSIWHYKDRLVLSRTSKLIPTMLNTFHDLVVGGHSGFLRTYKRLASELYWPGMKKDVQ 420
            QKN +W YK+RLVLS+TSKLIPTML+TFHD +VGGHSGFL+TYKRLASELYWPGMKKDVQ
Sbjct: 867  QKNDMWRYKNRLVLSKTSKLIPTMLHTFHDSMVGGHSGFLQTYKRLASELYWPGMKKDVQ 926

Query: 421  KYCEECVVCQRNKTVALSPAGLLIPLEIPQQVWNDISMDFV------KGFEVVLVVVDRL 473
            +YCEECVVCQRNKTVALSPAGLL PLE PQQVW+ ISMDFV      KGFEVVLVVVDRL
Sbjct: 927  EYCEECVVCQRNKTVALSPAGLLTPLETPQQVWSYISMDFVEGLPKAKGFEVVLVVVDRL 986

[Close]

BLAST of Cmc05g0125461 vs. NCBI nr
Match: TYK23779.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 724.5 bits (1869), Expect = 5.7e-205
Identity = 352/513 (68.62%), Postives = 415/513 (80.90%), Query Frame = 0


Query: 1    MVEKDIPKTAFRTHEGHYEFLIMPFGLTNASATFQALMNVVFKPYLRKFVLVFFDDILVY 60
            M++KDIPKTAFRTHEGHYEFL+MPFGLTNA  TFQALMN +F+P+LRKFVLVFFDDIL+Y
Sbjct: 648  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPTTFQALMNSIFRPFLRKFVLVFFDDILIY 707

Query: 61   SKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYLGHIISGGGVEVDPEKIRSIV 120
            SKNE +H+ H+ KV  +LR+HSL+AN KKC+F Q K+EYLGHIISG GVEVD EKI+ + 
Sbjct: 708  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEVDSEKIKVVA 767

Query: 121  DWPTPTNVREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKGGFVWNKEAEEAFERLKSA 180
            DWP PTN+RE+RGFLGLTGYYRRFV+HYGSIAAPL QLLKKGGF WN++AEE+F +LKSA
Sbjct: 768  DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSA 827

Query: 181  MISLPVLALPNFEQPFEIETDALGVGVDAVLTRMNKPIAFYSHTLAMWDRAKPVYERELM 240
            M+SLP LALPNF  PFEIETDA G GV AVL +  +PIAFYSHTL+M DRA+PVYERELM
Sbjct: 828  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELM 887

Query: 241  AVIL-VQCWRPYLFGTRFMVKIDQKSLKFLLEQRTIQPQYQKWVAKLLGYSFEVIYKPGL 300
            AV+L VQ WRPYL G +F+VK DQKSLKFLLEQR IQPQYQKW++KLLGYSFEV+YKPGL
Sbjct: 888  AVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 947

Query: 301  ENK---------------------------------KDEELQKAFENEQTDTIKKNTKFS 360
            ENK                                 KDE+L+K   +   +   + +KF+
Sbjct: 948  ENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFT 1007

Query: 361  QKNSIWHYKDRLVLSRTSKLIPTMLNTFHDLVVGGHSGFLRTYKRLASELYWPGMKKDVQ 420
             KNS+ HYK+RLV+S+ S LIP ++NTFHD VVGGHSGFLRTYKRLASELYW GMK DV+
Sbjct: 1008 IKNSLLHYKNRLVISKASSLIPAIMNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVK 1067

Query: 421  KYCEECVVCQRNKTVALSPAGLLIPLEIPQQVWNDISMDFV------KGFEVVLVVVDRL 473
            K+CE CV CQRNK++ALSP GLL+PL+IP Q+W+DISMDF+      KG++V+LVVVDRL
Sbjct: 1068 KHCEACVTCQRNKSLALSPVGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL 1127

[Close]

BLAST of Cmc05g0125461 vs. NCBI nr
Match: TYK02195.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 722.6 bits (1864), Expect = 2.2e-204
Identity = 354/513 (69.01%), Postives = 417/513 (81.29%), Query Frame = 0


Query: 1    MVEKDIPKTAFRTHEGHYEFLIMPFGLTNASATFQALMNVVFKPYLRKFVLVFFDDILVY 60
            M++KDIPKTAFRTHEGHYEFL+MPFGLTNA ATFQALMN +F+P+LRKFVLVFFDDIL+Y
Sbjct: 738  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 797

Query: 61   SKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYLGHIISGGGVEVDPEKIRSIV 120
            SKNE +H+ H+ KV  +LR+HSL+AN KKC+F Q K+EYLGHIISG GVEVD EKI+++ 
Sbjct: 798  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEVDSEKIKAVA 857

Query: 121  DWPTPTNVREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKGGFVWNKEAEEAFERLKSA 180
            DWP PTN+RE+RGFLGLTGYYRRFV+HYGSIAAPL QLLKKGGF WN++AEE+F +LKSA
Sbjct: 858  DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSA 917

Query: 181  MISLPVLALPNFEQPFEIETDALGVGVDAVLTRMNKPIAFYSHTLAMWDRAKPVYERELM 240
            M+SLP LALPNF  PFEIETDA G GV AVL +  +PIAFYSHTL+M DRA+PVYERELM
Sbjct: 918  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELM 977

Query: 241  AVIL-VQCWRPYLFGTRFMVKIDQKSLKFLLEQRTIQPQYQKWVAKLLGYSFEVIYKPGL 300
            AV+L VQ WRPYL G +F+VK DQKSLKFLLEQR IQPQYQKW++KLLGYSFEV+YKPGL
Sbjct: 978  AVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 1037

Query: 301  ENK---------------------------------KDEELQKAFENEQTDTIKKNTKFS 360
            ENK                                 KDE+L+K   +   +   + +KF+
Sbjct: 1038 ENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFT 1097

Query: 361  QKNSIWHYKDRLVLSRTSKLIPTMLNTFHDLVVGGHSGFLRTYKRLASELYWPGMKKDVQ 420
             KNS+ HYK+RLV+S+ S LIP +LNTFHD VV GHSGFLRTYKRLASELYW GMK DV+
Sbjct: 1098 IKNSLLHYKNRLVISKASSLIPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVK 1157

Query: 421  KYCEECVVCQRNKTVALSPAGLLIPLEIPQQVWNDISMDFV------KGFEVVLVVVDRL 473
            K+CE CV CQRNK++ALSPAGLL+PL+IP Q+W+DISMDF+      KG++V+LVVVDRL
Sbjct: 1158 KHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL 1217

[Close]

BLAST of Cmc05g0125461 vs. NCBI nr
Match: KAA0047643.1 (putative retroelement pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 722.2 bits (1863), Expect = 2.8e-204
Identity = 351/512 (68.55%), Postives = 415/512 (81.05%), Query Frame = 0


Query: 1   MVEKDIPKTAFRTHEGHYEFLIMPFGLTNASATFQALMNVVFKPYLRKFVLVFFDDILVY 60
           M++KDIPKTAFRTHEGHYEFL+MPFGLTNA ATFQALMN +F+P+LRKFVLVFFDDIL+Y
Sbjct: 1   MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60

Query: 61  SKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYLGHIISGGGVEVDPEKIRSIV 120
           SKNE +H+ H+ KV  +LR+HSL+AN KKC+F Q K+EYLGHIISG GVE+D EKI+++ 
Sbjct: 61  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA 120

Query: 121 DWPTPTNVREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKGGFVWNKEAEEAFERLKSA 180
           DWP PTN+RE+RGFLGLTGYYRRFV+HYGSIAAPL QLLKK GF WN++AEE+F +LKSA
Sbjct: 121 DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA 180

Query: 181 MISLPVLALPNFEQPFEIETDALGVGVDAVLTRMNKPIAFYSHTLAMWDRAKPVYERELM 240
           M+SLP LALPNF  PFEIETD  G GV AVL +  +PIAFYSHTL+M DRA+PVYERELM
Sbjct: 181 MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM 240

Query: 241 AVIL-VQCWRPYLFGTRFMVKIDQKSLKFLLEQRTIQPQYQKWVAKLLGYSFEVIYKPGL 300
           AV+L VQ WRPYL G +F+VK DQKSLKFLLEQR IQPQYQKW++KLLGYSFEV+YKPGL
Sbjct: 241 AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300

Query: 301 ENK--------------------------------KDEELQKAFENEQTDTIKKNTKFSQ 360
           ENK                                +DE+L+K   +   +   +  KF+ 
Sbjct: 301 ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTI 360

Query: 361 KNSIWHYKDRLVLSRTSKLIPTMLNTFHDLVVGGHSGFLRTYKRLASELYWPGMKKDVQK 420
           KNS+ HYK+RLV+S+ S LIP +LNTFHD VVGGHSGFLRTYKRLASELYW GMK DV+K
Sbjct: 361 KNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKK 420

Query: 421 YCEECVVCQRNKTVALSPAGLLIPLEIPQQVWNDISMDFV------KGFEVVLVVVDRLS 473
           +CE CV CQRNK++ALSPAGLL+PL+IP Q+W+DISMDF+      KG++V+LVVVDRLS
Sbjct: 421 HCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS 480

[Close]

BLAST of Cmc05g0125461 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 241.1 bits (614), Expect = 2.5e-62
Identity = 169/542 (31.18%), Postives = 259/542 (47.79%), Query Frame = 0


Query: 1    MVEKDIPKTAFRTHEGHYEFLIMPFGLTNASATFQALMNVVFKPYLRKFVLVFFDDILVY 60
            M  KD  KTAF T  G YE+ +MPFGL NA +TF   M   F+    +FV V+ DDIL++
Sbjct: 722  MEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIF 781

Query: 61   SKNEDEHVVHLGKVLSSLR-EHSLYANKKCSFAQPKIEYLGHIISGGGVEVDPEKIRSIV 120
            S++ +EH  HL  VL  L+ E+ +   KKC FA  + E+LG+ I    +     K  +I 
Sbjct: 782  SESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIR 841

Query: 121  DWPTPTNVREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKGGFVWNKEAEEAFERLKSA 180
            D+PTP  V++ + FLG+  YYRRF+ +   IA P IQL       W ++ ++A E+LK+A
Sbjct: 842  DFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP-IQLFICDKSQWTEKQDKAIEKLKAA 901

Query: 181  MISLPVLALPNFEQPFEIETDALGVGVDAVLTRMNKP------IAFYSHTLAMWDRAKPV 240
            + + PVL   N +  + + TDA   G+ AVL  ++        + ++S +L    +  P 
Sbjct: 902  LCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPA 961

Query: 241  YERELMAVI-LVQCWRPYLFGTRFMVKIDQKSLKFLLEQRTIQPQYQKWVAKLLGYSFEV 300
             E EL+ +I  +  +R  L G  F ++ D  SL  L  +     + Q+W+  L  Y F +
Sbjct: 962  GELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTL 1021

Query: 301  IYKPGLENKKDEELQKAF------------------------------------------ 360
             Y  G +N   + + +A                                           
Sbjct: 1022 EYLAGPKNVVADAISRAIYTITPETSRPIDTESWKSYYKSDPLCSAVLIHMKELTQHNVT 1081

Query: 361  ------------ENEQTDTIKKNTKFSQKNSIWHYKDRLVLSRTSKLIPTMLNTFHD-LV 420
                        + E ++T +KN  +S ++ + +Y+DRLV+    K    ++  +HD  +
Sbjct: 1082 PEDMSAFRSYQKKLELSETFRKN--YSLEDEMIYYQDRLVV--PIKQQNAVMRLYHDHTL 1141

Query: 421  VGGHSGFLRTYKRLASELYWPGMKKDVQKYCEECVVCQRNKTVALSPAGLLIPLEIPQQV 473
             GGH G   T  +++   YWP ++  + +Y   CV CQ  K+      GLL PL I +  
Sbjct: 1142 FGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGR 1201

[Close]

BLAST of Cmc05g0125461 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 239.2 bits (609), Expect = 9.5e-62
Identity = 168/542 (31.00%), Postives = 258/542 (47.60%), Query Frame = 0


Query: 1    MVEKDIPKTAFRTHEGHYEFLIMPFGLTNASATFQALMNVVFKPYLRKFVLVFFDDILVY 60
            M  KD  KTAF T  G YE+ +MPFGL NA +TF   M   F+    +FV V+ DDIL++
Sbjct: 696  MEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIF 755

Query: 61   SKNEDEHVVHLGKVLSSLR-EHSLYANKKCSFAQPKIEYLGHIISGGGVEVDPEKIRSIV 120
            S++ +EH  HL  VL  L+ E+ +   KKC FA  + E+LG+ I    +     K  +I 
Sbjct: 756  SESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIR 815

Query: 121  DWPTPTNVREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKGGFVWNKEAEEAFERLKSA 180
            D+PTP  V++ + FLG+  YYRRF+ +   IA P IQL       W ++ ++A ++LK A
Sbjct: 816  DFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP-IQLFICDKSQWTEKQDKAIDKLKDA 875

Query: 181  MISLPVLALPNFEQPFEIETDALGVGVDAVLTRMNKP------IAFYSHTLAMWDRAKPV 240
            + + PVL   N +  + + TDA   G+ AVL  ++        + ++S +L    +  P 
Sbjct: 876  LCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPA 935

Query: 241  YERELMAVI-LVQCWRPYLFGTRFMVKIDQKSLKFLLEQRTIQPQYQKWVAKLLGYSFEV 300
             E EL+ +I  +  +R  L G  F ++ D  SL  L  +     + Q+W+  L  Y F +
Sbjct: 936  GELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTL 995

Query: 301  IYKPGLENKKDEELQKAF------------------------------------------ 360
             Y  G +N   + + +A                                           
Sbjct: 996  EYLAGPKNVVADAISRAVYTITPETSRPIDTESWKSYYKSDPLCSAVLIHMKELTQHNVT 1055

Query: 361  ------------ENEQTDTIKKNTKFSQKNSIWHYKDRLVLSRTSKLIPTMLNTFHD-LV 420
                        + E ++T +KN  +S ++ + +Y+DRLV+    K    ++  +HD  +
Sbjct: 1056 PEDMSAFRSYQKKLELSETFRKN--YSLEDEMIYYQDRLVV--PIKQQNAVMRLYHDHTL 1115

Query: 421  VGGHSGFLRTYKRLASELYWPGMKKDVQKYCEECVVCQRNKTVALSPAGLLIPLEIPQQV 473
             GGH G   T  +++   YWP ++  + +Y   CV CQ  K+      GLL PL I +  
Sbjct: 1116 FGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGR 1175

[Close]

BLAST of Cmc05g0125461 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.1e-60
Identity = 130/357 (36.41%), Postives = 209/357 (58.54%), Query Frame = 0


Query: 1   MVEKDIPKTAFRTHEGHYEFLIMPFGLTNASATFQALMNVVFKPYLRKFVLVFFDDILVY 60
           M E+ I KTAF T  GHYE+L MPFGL NA ATFQ  MN + +P L K  LV+ DDI+++
Sbjct: 311 MDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIF 370

Query: 61  SKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYLGHIISGGGVEVDPEKIRSIV 120
           S +  EH+  +  V + L + +L     KC F + +  +LGHI++  G++ +P K+++IV
Sbjct: 371 STSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIV 430

Query: 121 DWPTPTNVREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKGGFVWNKEAE--EAFERLK 180
            +P PT  +EIR FLGLTGYYR+F+ +Y  IA P+   LKK   +  ++ E  EAFE+LK
Sbjct: 431 SYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLK 490

Query: 181 SAMISLPVLALPNFEQPFEIETDALGVGVDAVLTRMNKPIAFYSHTLAMWDRAKPVYERE 240
           + +I  P+L LP+FE+ F + TDA  + + AVL++   PI+F S TL   +      E+E
Sbjct: 491 ALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKE 550

Query: 241 LMAVI-LVQCWRPYLFGTRFMVKIDQKSLKFLLEQRTIQPQYQKWVAKLLGYSFEVIYKP 300
           L+A++   + +R YL G +F++  D + L++L   +    + ++W  +L  Y F++ Y  
Sbjct: 551 LLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIK 610

Query: 301 GLENKKDEELQ--KAFENEQTDTIKKNTKFSQKNSIW-------HYKDRLVLSRTSK 345
           G EN   + L   K  EN  ++  + + +    N I        ++K +++  ++ K
Sbjct: 611 GKENSVADALSRIKIEENHHSEATQHSAEEDNSNLIHLTEKPINYFKKQIIFIKSDK 667

[Close]

BLAST of Cmc05g0125461 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.8e-59
Identity = 151/529 (28.54%), Postives = 249/529 (47.07%), Query Frame = 0


Query: 5    DIPKTAFRTHEGHYEFLIMPFGLTNASATFQALMNVVFKPYLRKFVLVFFDDILVYSKNE 64
            D  K AFR   G +E+L+MP+G++ A A FQ  +N +        V+ + DDIL++SK+E
Sbjct: 516  DEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSE 575

Query: 65   DEHVVHLGKVLSSLREHSLYANK-KCSFAQPKIEYLGHIISGGGVEVDPEKIRSIVDWPT 124
             EHV H+  VL  L+  +L  N+ KC F Q +++++G+ IS  G     E I  ++ W  
Sbjct: 576  SEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQ 635

Query: 125  PTNVREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKG-GFVWNKEAEEAFERLKSAMIS 184
            P N +E+R FLG   Y R+F+     +  PL  LLKK   + W     +A E +K  ++S
Sbjct: 636  PKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVS 695

Query: 185  LPVLALPNFEQPFEIETDALGVGVDAVLTRMNK-----PIAFYSHTLAMWDRAKPVYERE 244
             PVL   +F +   +ETDA  V V AVL++ +      P+ +YS  ++       V ++E
Sbjct: 696  PPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKE 755

Query: 245  LMAVI-LVQCWRPYLFGT--RFMVKIDQKSL--KFLLEQRTIQPQYQKWVAKLLGYSFEV 304
            ++A+I  ++ WR YL  T   F +  D ++L  +   E      +  +W   L  ++FE+
Sbjct: 756  MLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEI 815

Query: 305  IYKPGLEN----------------KKDEE-----------LQKAFENEQTDTIKKNTKF- 364
             Y+PG  N                 KD E           +   F+N+       +TK  
Sbjct: 816  NYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLL 875

Query: 365  ---------------SQKNSIWHYKDRLVLSRTSKLIPTMLNTFHDLVVGGHSGFLRTYK 424
                            +   + + KD+++L   ++L  T++  +H+     H G      
Sbjct: 876  NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 935

Query: 425  RLASELYWPGMKKDVQKYCEECVVCQRNKTVALSPAGLLIPLEIPQQVWNDISMDFV--- 473
             +     W G++K +Q+Y + C  CQ NK+    P G L P+   ++ W  +SMDF+   
Sbjct: 936  IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITAL 995

[Close]

BLAST of Cmc05g0125461 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.8e-59
Identity = 151/529 (28.54%), Postives = 249/529 (47.07%), Query Frame = 0


Query: 5    DIPKTAFRTHEGHYEFLIMPFGLTNASATFQALMNVVFKPYLRKFVLVFFDDILVYSKNE 64
            D  K AFR   G +E+L+MP+G++ A A FQ  +N +        V+ + DDIL++SK+E
Sbjct: 516  DEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSE 575

Query: 65   DEHVVHLGKVLSSLREHSLYANK-KCSFAQPKIEYLGHIISGGGVEVDPEKIRSIVDWPT 124
             EHV H+  VL  L+  +L  N+ KC F Q +++++G+ IS  G     E I  ++ W  
Sbjct: 576  SEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQ 635

Query: 125  PTNVREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKG-GFVWNKEAEEAFERLKSAMIS 184
            P N +E+R FLG   Y R+F+     +  PL  LLKK   + W     +A E +K  ++S
Sbjct: 636  PKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVS 695

Query: 185  LPVLALPNFEQPFEIETDALGVGVDAVLTRMNK-----PIAFYSHTLAMWDRAKPVYERE 244
             PVL   +F +   +ETDA  V V AVL++ +      P+ +YS  ++       V ++E
Sbjct: 696  PPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKE 755

Query: 245  LMAVI-LVQCWRPYLFGT--RFMVKIDQKSL--KFLLEQRTIQPQYQKWVAKLLGYSFEV 304
            ++A+I  ++ WR YL  T   F +  D ++L  +   E      +  +W   L  ++FE+
Sbjct: 756  MLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEI 815

Query: 305  IYKPGLEN----------------KKDEE-----------LQKAFENEQTDTIKKNTKF- 364
             Y+PG  N                 KD E           +   F+N+       +TK  
Sbjct: 816  NYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLL 875

Query: 365  ---------------SQKNSIWHYKDRLVLSRTSKLIPTMLNTFHDLVVGGHSGFLRTYK 424
                            +   + + KD+++L   ++L  T++  +H+     H G      
Sbjct: 876  NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTN 935

Query: 425  RLASELYWPGMKKDVQKYCEECVVCQRNKTVALSPAGLLIPLEIPQQVWNDISMDFV--- 473
             +     W G++K +Q+Y + C  CQ NK+    P G L P+   ++ W  +SMDF+   
Sbjct: 936  IILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITAL 995

[Close]

BLAST of Cmc05g0125461 vs. ExPASy TrEMBL
Match: A0A5D3DK67 (Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00980 PE=4 SV=1)

HSP 1 Score: 817.8 bits (2111), Expect = 2.4e-233
Identity = 416/513 (81.09%), Postives = 438/513 (85.38%), Query Frame = 0


Query: 1    MVEKDIPKTAFRTHEGHYEFLIMPFGLTNASATFQALMNVVFKPYLRKFVLVFFDDILVY 60
            MVEKDIPKTAFRTHEGHYEFL+MPFGLTNA ATFQ LMN VFKPYLRKFVLVFFDDILVY
Sbjct: 507  MVEKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQTLMNAVFKPYLRKFVLVFFDDILVY 566

Query: 61   SKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYLGHIISGGGVEVDPEKIRSIV 120
            SKNE++HVVHLGKVLSSLREHSLYAN KK SFAQ K+EYL HII GGGVEVDP+KIRSI 
Sbjct: 567  SKNEEDHVVHLGKVLSSLREHSLYANKKKGSFAQLKVEYLEHIILGGGVEVDPQKIRSIA 626

Query: 121  DWPTPTNVREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKGGFVWNKEAEEAFERLKSA 180
            DWPTPTNVRE RGFLGLT YYRRFVKHYGSIAAPL QLLKKGGFVWNKEA+EAFE+LKSA
Sbjct: 627  DWPTPTNVRETRGFLGLTSYYRRFVKHYGSIAAPLTQLLKKGGFVWNKEADEAFEQLKSA 686

Query: 181  MISLPVLALPNFEQPFEIETDALGVGVDAVLTRMNKPIAFYSHTLAMWDRAKPVYERELM 240
            MISLPVLALPNFE+PFEIETDA GVGV A+LT+MNKPIAFYSH LAM DRAKPVYERELM
Sbjct: 687  MISLPVLALPNFERPFEIETDASGVGVGALLTQMNKPIAFYSHKLAMRDRAKPVYERELM 746

Query: 241  AVIL-VQCWRPYLFGTRFMVKIDQKSLKFLLEQRTIQPQYQKWVAKLLGYSFEVIYKPGL 300
            AV+L VQ WRPYL G RF+VK DQKSLKFLLEQRTIQPQYQ WV KLLGYSFEVIYKPGL
Sbjct: 747  AVVLAVQRWRPYLLGARFVVKTDQKSLKFLLEQRTIQPQYQNWVTKLLGYSFEVIYKPGL 806

Query: 301  ENK---------------------------------KDEELQKAFENEQTDTIKKNTKFS 360
            ENK                                 KDE LQKA   EQT T K+N KFS
Sbjct: 807  ENKAADALLRKPIEIMNCRMTVSTLVDLATIKEEVEKDEILQKAIAKEQTYTNKRNIKFS 866

Query: 361  QKNSIWHYKDRLVLSRTSKLIPTMLNTFHDLVVGGHSGFLRTYKRLASELYWPGMKKDVQ 420
            QKN +W YK+RLVLS+TSKLIPTML+TFHD +VGGHSGFL+TYKRLASELYWPGMKKDVQ
Sbjct: 867  QKNDMWRYKNRLVLSKTSKLIPTMLHTFHDSMVGGHSGFLQTYKRLASELYWPGMKKDVQ 926

Query: 421  KYCEECVVCQRNKTVALSPAGLLIPLEIPQQVWNDISMDFV------KGFEVVLVVVDRL 473
            +YCEECVVCQRNKTVALSPAGLL PLE PQQVW+ ISMDFV      KGFEVVLVVVDRL
Sbjct: 927  EYCEECVVCQRNKTVALSPAGLLTPLETPQQVWSYISMDFVEGLPKAKGFEVVLVVVDRL 986

[Close]

BLAST of Cmc05g0125461 vs. ExPASy TrEMBL
Match: A0A5A7V139 (Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G001800 PE=4 SV=1)

HSP 1 Score: 817.8 bits (2111), Expect = 2.4e-233
Identity = 416/513 (81.09%), Postives = 438/513 (85.38%), Query Frame = 0


Query: 1    MVEKDIPKTAFRTHEGHYEFLIMPFGLTNASATFQALMNVVFKPYLRKFVLVFFDDILVY 60
            MVEKDIPKTAFRTHEGHYEFL+MPFGLTNA ATFQ LMN VFKPYLRKFVLVFFDDILVY
Sbjct: 507  MVEKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQTLMNAVFKPYLRKFVLVFFDDILVY 566

Query: 61   SKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYLGHIISGGGVEVDPEKIRSIV 120
            SKNE++HVVHLGKVLSSLREHSLYAN KK SFAQ K+EYL HII GGGVEVDP+KIRSI 
Sbjct: 567  SKNEEDHVVHLGKVLSSLREHSLYANKKKGSFAQLKVEYLEHIILGGGVEVDPQKIRSIA 626

Query: 121  DWPTPTNVREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKGGFVWNKEAEEAFERLKSA 180
            DWPTPTNVRE RGFLGLT YYRRFVKHYGSIAAPL QLLKKGGFVWNKEA+EAFE+LKSA
Sbjct: 627  DWPTPTNVRETRGFLGLTSYYRRFVKHYGSIAAPLTQLLKKGGFVWNKEADEAFEQLKSA 686

Query: 181  MISLPVLALPNFEQPFEIETDALGVGVDAVLTRMNKPIAFYSHTLAMWDRAKPVYERELM 240
            MISLPVLALPNFE+PFEIETDA GVGV A+LT+MNKPIAFYSH LAM DRAKPVYERELM
Sbjct: 687  MISLPVLALPNFERPFEIETDASGVGVGALLTQMNKPIAFYSHKLAMRDRAKPVYERELM 746

Query: 241  AVIL-VQCWRPYLFGTRFMVKIDQKSLKFLLEQRTIQPQYQKWVAKLLGYSFEVIYKPGL 300
            AV+L VQ WRPYL G RF+VK DQKSLKFLLEQRTIQPQYQ WV KLLGYSFEVIYKPGL
Sbjct: 747  AVVLAVQRWRPYLLGARFVVKTDQKSLKFLLEQRTIQPQYQNWVTKLLGYSFEVIYKPGL 806

Query: 301  ENK---------------------------------KDEELQKAFENEQTDTIKKNTKFS 360
            ENK                                 KDE LQKA   EQT T K+N KFS
Sbjct: 807  ENKAADALLRKPIEIMNCRMTVSTLVDLATIKEEVEKDEILQKAIAKEQTYTNKRNIKFS 866

Query: 361  QKNSIWHYKDRLVLSRTSKLIPTMLNTFHDLVVGGHSGFLRTYKRLASELYWPGMKKDVQ 420
            QKN +W YK+RLVLS+TSKLIPTML+TFHD +VGGHSGFL+TYKRLASELYWPGMKKDVQ
Sbjct: 867  QKNDMWRYKNRLVLSKTSKLIPTMLHTFHDSMVGGHSGFLQTYKRLASELYWPGMKKDVQ 926

Query: 421  KYCEECVVCQRNKTVALSPAGLLIPLEIPQQVWNDISMDFV------KGFEVVLVVVDRL 473
            +YCEECVVCQRNKTVALSPAGLL PLE PQQVW+ ISMDFV      KGFEVVLVVVDRL
Sbjct: 927  EYCEECVVCQRNKTVALSPAGLLTPLETPQQVWSYISMDFVEGLPKAKGFEVVLVVVDRL 986

[Close]

BLAST of Cmc05g0125461 vs. ExPASy TrEMBL
Match: A0A5D3DKH5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001060 PE=4 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 2.8e-205
Identity = 352/513 (68.62%), Postives = 415/513 (80.90%), Query Frame = 0


Query: 1    MVEKDIPKTAFRTHEGHYEFLIMPFGLTNASATFQALMNVVFKPYLRKFVLVFFDDILVY 60
            M++KDIPKTAFRTHEGHYEFL+MPFGLTNA  TFQALMN +F+P+LRKFVLVFFDDIL+Y
Sbjct: 648  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPTTFQALMNSIFRPFLRKFVLVFFDDILIY 707

Query: 61   SKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYLGHIISGGGVEVDPEKIRSIV 120
            SKNE +H+ H+ KV  +LR+HSL+AN KKC+F Q K+EYLGHIISG GVEVD EKI+ + 
Sbjct: 708  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEVDSEKIKVVA 767

Query: 121  DWPTPTNVREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKGGFVWNKEAEEAFERLKSA 180
            DWP PTN+RE+RGFLGLTGYYRRFV+HYGSIAAPL QLLKKGGF WN++AEE+F +LKSA
Sbjct: 768  DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSA 827

Query: 181  MISLPVLALPNFEQPFEIETDALGVGVDAVLTRMNKPIAFYSHTLAMWDRAKPVYERELM 240
            M+SLP LALPNF  PFEIETDA G GV AVL +  +PIAFYSHTL+M DRA+PVYERELM
Sbjct: 828  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELM 887

Query: 241  AVIL-VQCWRPYLFGTRFMVKIDQKSLKFLLEQRTIQPQYQKWVAKLLGYSFEVIYKPGL 300
            AV+L VQ WRPYL G +F+VK DQKSLKFLLEQR IQPQYQKW++KLLGYSFEV+YKPGL
Sbjct: 888  AVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 947

Query: 301  ENK---------------------------------KDEELQKAFENEQTDTIKKNTKFS 360
            ENK                                 KDE+L+K   +   +   + +KF+
Sbjct: 948  ENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFT 1007

Query: 361  QKNSIWHYKDRLVLSRTSKLIPTMLNTFHDLVVGGHSGFLRTYKRLASELYWPGMKKDVQ 420
             KNS+ HYK+RLV+S+ S LIP ++NTFHD VVGGHSGFLRTYKRLASELYW GMK DV+
Sbjct: 1008 IKNSLLHYKNRLVISKASSLIPAIMNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVK 1067

Query: 421  KYCEECVVCQRNKTVALSPAGLLIPLEIPQQVWNDISMDFV------KGFEVVLVVVDRL 473
            K+CE CV CQRNK++ALSP GLL+PL+IP Q+W+DISMDF+      KG++V+LVVVDRL
Sbjct: 1068 KHCEACVTCQRNKSLALSPVGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL 1127

[Close]

BLAST of Cmc05g0125461 vs. ExPASy TrEMBL
Match: A0A5D3BSP2 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00980 PE=4 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 1.0e-204
Identity = 354/513 (69.01%), Postives = 417/513 (81.29%), Query Frame = 0


Query: 1    MVEKDIPKTAFRTHEGHYEFLIMPFGLTNASATFQALMNVVFKPYLRKFVLVFFDDILVY 60
            M++KDIPKTAFRTHEGHYEFL+MPFGLTNA ATFQALMN +F+P+LRKFVLVFFDDIL+Y
Sbjct: 738  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 797

Query: 61   SKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYLGHIISGGGVEVDPEKIRSIV 120
            SKNE +H+ H+ KV  +LR+HSL+AN KKC+F Q K+EYLGHIISG GVEVD EKI+++ 
Sbjct: 798  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEVDSEKIKAVA 857

Query: 121  DWPTPTNVREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKGGFVWNKEAEEAFERLKSA 180
            DWP PTN+RE+RGFLGLTGYYRRFV+HYGSIAAPL QLLKKGGF WN++AEE+F +LKSA
Sbjct: 858  DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSA 917

Query: 181  MISLPVLALPNFEQPFEIETDALGVGVDAVLTRMNKPIAFYSHTLAMWDRAKPVYERELM 240
            M+SLP LALPNF  PFEIETDA G GV AVL +  +PIAFYSHTL+M DRA+PVYERELM
Sbjct: 918  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELM 977

Query: 241  AVIL-VQCWRPYLFGTRFMVKIDQKSLKFLLEQRTIQPQYQKWVAKLLGYSFEVIYKPGL 300
            AV+L VQ WRPYL G +F+VK DQKSLKFLLEQR IQPQYQKW++KLLGYSFEV+YKPGL
Sbjct: 978  AVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 1037

Query: 301  ENK---------------------------------KDEELQKAFENEQTDTIKKNTKFS 360
            ENK                                 KDE+L+K   +   +   + +KF+
Sbjct: 1038 ENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFT 1097

Query: 361  QKNSIWHYKDRLVLSRTSKLIPTMLNTFHDLVVGGHSGFLRTYKRLASELYWPGMKKDVQ 420
             KNS+ HYK+RLV+S+ S LIP +LNTFHD VV GHSGFLRTYKRLASELYW GMK DV+
Sbjct: 1098 IKNSLLHYKNRLVISKASSLIPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVK 1157

Query: 421  KYCEECVVCQRNKTVALSPAGLLIPLEIPQQVWNDISMDFV------KGFEVVLVVVDRL 473
            K+CE CV CQRNK++ALSPAGLL+PL+IP Q+W+DISMDF+      KG++V+LVVVDRL
Sbjct: 1158 KHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL 1217

[Close]

BLAST of Cmc05g0125461 vs. ExPASy TrEMBL
Match: A0A5A7TVR3 (Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G001270 PE=4 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 1.4e-204
Identity = 351/512 (68.55%), Postives = 415/512 (81.05%), Query Frame = 0


Query: 1   MVEKDIPKTAFRTHEGHYEFLIMPFGLTNASATFQALMNVVFKPYLRKFVLVFFDDILVY 60
           M++KDIPKTAFRTHEGHYEFL+MPFGLTNA ATFQALMN +F+P+LRKFVLVFFDDIL+Y
Sbjct: 1   MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60

Query: 61  SKNEDEHVVHLGKVLSSLREHSLYAN-KKCSFAQPKIEYLGHIISGGGVEVDPEKIRSIV 120
           SKNE +H+ H+ KV  +LR+HSL+AN KKC+F Q K+EYLGHIISG GVE+D EKI+++ 
Sbjct: 61  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA 120

Query: 121 DWPTPTNVREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKGGFVWNKEAEEAFERLKSA 180
           DWP PTN+RE+RGFLGLTGYYRRFV+HYGSIAAPL QLLKK GF WN++AEE+F +LKSA
Sbjct: 121 DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA 180

Query: 181 MISLPVLALPNFEQPFEIETDALGVGVDAVLTRMNKPIAFYSHTLAMWDRAKPVYERELM 240
           M+SLP LALPNF  PFEIETD  G GV AVL +  +PIAFYSHTL+M DRA+PVYERELM
Sbjct: 181 MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM 240

Query: 241 AVIL-VQCWRPYLFGTRFMVKIDQKSLKFLLEQRTIQPQYQKWVAKLLGYSFEVIYKPGL 300
           AV+L VQ WRPYL G +F+VK DQKSLKFLLEQR IQPQYQKW++KLLGYSFEV+YKPGL
Sbjct: 241 AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300

Query: 301 ENK--------------------------------KDEELQKAFENEQTDTIKKNTKFSQ 360
           ENK                                +DE+L+K   +   +   +  KF+ 
Sbjct: 301 ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTI 360

Query: 361 KNSIWHYKDRLVLSRTSKLIPTMLNTFHDLVVGGHSGFLRTYKRLASELYWPGMKKDVQK 420
           KNS+ HYK+RLV+S+ S LIP +LNTFHD VVGGHSGFLRTYKRLASELYW GMK DV+K
Sbjct: 361 KNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKK 420

Query: 421 YCEECVVCQRNKTVALSPAGLLIPLEIPQQVWNDISMDFV------KGFEVVLVVVDRLS 473
           +CE CV CQRNK++ALSPAGLL+PL+IP Q+W+DISMDF+      KG++V+LVVVDRLS
Sbjct: 421 HCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS 480

[Close]

BLAST of Cmc05g0125461 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 5.8e-38
Identity = 75/129 (58.14%), Postives = 90/129 (69.77%), Query Frame = 0


Query: 70  HLGKVLSSLREHSLYAN-KKCSFAQPKIEYLG--HIISGGGVEVDPEKIRSIVDWPTPTN 129
           HLG VL    +H  YAN KKC+F QP+I YLG  HIISG GV  DP K+ ++V WP P N
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 130 VREIRGFLGLTGYYRRFVKHYGSIAAPLIQLLKKGGFVWNKEAEEAFERLKSAMISLPVL 189
             E+RGFLGLTGYYRRFVK+YG I  PL +LLKK    W + A  AF+ LK A+ +LPVL
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLPVL 122

Query: 190 ALPNFEQPF 196
           ALP+ + PF
Sbjct: 123 ALPDLKLPF 131

The following BLAST results are available for this feature:

BLAST of Cmc05g0125461 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK24006.1	4.9e-233	81.09	Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]	[more]
KAA0061922.1	4.9e-233	81.09	Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]	[more]
TYK23779.1	5.7e-205	68.62	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK02195.1	2.2e-204	69.01	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0047643.1	2.8e-204	68.55	putative retroelement pol polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0125461 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7LHG5	2.5e-62	31.18	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q99315	9.5e-62	31.00	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P20825	1.1e-60	36.41	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P0CT41	5.8e-59	28.54	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	5.8e-59	28.54	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc05g0125461 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DK67	2.4e-233	81.09	Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7V139	2.4e-233	81.09	Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5D3DKH5	2.8e-205	68.62	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BSP2	1.0e-204	69.01	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TVR3	1.4e-204	68.55	Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Cmc05g0125461 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	5.8e-38	58.14	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 306..398 e-value: 4.3E-18 score: 67.3
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 2..29 e-value: 8.4E-38 score: 131.8
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 1..299 coord: 324..472
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..103 e-value: 1.41169E-46 score: 157.372
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 196..300 e-value: 4.77525E-28 score: 106.038
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 112..202 e-value: 4.8E-29 score: 102.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 30..103 e-value: 8.4E-38 score: 131.8
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 408..472 e-value: 2.3E-8 score: 35.5
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 343..399 e-value: 1.4E-19 score: 69.8
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 165..258 e-value: 7.1E-23 score: 80.5
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 13..103 e-value: 2.3E-16 score: 60.0
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..103 score: 11.929968
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 411..472
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0125461.1	Cmc05g0125461.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0015074	DNA integration
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0047938	glucose-6-phosphate 1-epimerase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004601	peroxidase activity