Cmc05g0125141 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0125141
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	protein Mpv17
Location	CMiso1.1chr05: 2290820 .. 2293211 (+)
RNA-Seq Expression	Cmc05g0125141
Synteny	Cmc05g0125141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGATAGCGTAAGATATTTTTGGGGAACCAAATATAGAAGGGGTCACGTTTATCGATTAAAGCTGCGATGGGTTAGCTTAGTACACGAAAAACACATGTGTTGCCGCTGCACAACAAAGCAGCCGGACTCTTCTTCACCTTTGACGGTTAAATAGTTTCCTCTGTCGTCACATATTTGGTAGGCTCTCTCTCTTTCCGGCATGGATGCTTTGAGCGGAGGCAATGGCGGACTCTGGGGCTGGAACTTCCTCCTTCCTCATTCCAAATCTTCTCGTAACAACAAGAGAAGATCATTCGAGCCCAAATCCTCTAATTCCTTGGAAGCGACTGGTGGATCTGGTTTTCGTTTTCCTATAAAGCAGTACGTGACTGCAGGCTGTCTCACTCTCTCCGGCGACACTATTGCTCAGTTCTTTAGCCGATATCGTAAGGGAATCGCTTTGAATCCCACTTCTCTCTCTGATTCTGCCTCTGCCGACAAGGTTAGCTTCCCTCTCTTTGATTCTTCTCTTTAATTGATTGTTTTCTTGTAATTTTGAATTTTGAAAATTGTTCTGTATTCGGTAACTTAGGGCATGCTTGTTTCTTTGTTCGTAATTTGTATTGTGCATGTTTGTGGCTGCTCAAGTTTTCTGGGCCATCACTGTCGATTTTACCTGTTTGAACTTGAACGGGCCAATTTTCTTGGACTGAACTGTGGAATTGTAACTGTTGCTATTAAATATATTTGTTTTTCATTCTGTCTACAGTAGATTTTCTTTTTGTTGTGATGCATTTCTGATGTGGTCTTTAACCGTTTTTTTTTTCTTGGATCAAAATTCTTTTTCCAGATGAACATATTTTTAGAACATGATTGGATTCGGTCTTTGCGGATGGCTTCTTATGGATTTCTACTCTATGGTCCTGGATCCTTTGCATGGTACAACTATCTTGATCATGTTTTGCCTAAGAAATCGGTGGAGAATCTTATTCTTAAGGTACAGATGATTGTGAGTTTGGTGTTAGTAATTCTTATCTTAGCGGCTGAAGTTGAGCATGAAGCATATACAAGTTCTATGAAATATTTTCATAATCGTTTTTTCTTCAGGTTATCTTGAACCAAATTGTTCTTGGTCCAGCAGTTATTGGTGTTGTATTTGCATGGAACAGTCTCTGGCTAGGAAAACTCTCCCAGCTTCCTGAAATGTACCGAAAAGATGCTCTTCCTACATTGTCTTATGGTAAAGAAAAACGTCTCTGATTAGGGCCTTTTGTTGCCTAAGAACACAAGTGTAATGTAATCACTTTTATCTCTTTTGCAGGGGTTAGGTTCTGGATTCCTGTCAGCATATTGAATTTTTGGTAATTGTTCTTATTTAGTTACCCCCATGTGGGTTCCCTTCCAATTACTCAATCTACTTTTTCATTATAAAAAATGGCTAACCTTAAAAAAATGGTCGTTTGTTCTTGTATTCTTTCTCATCTTTTGATAGATTTTTTGGATGTTGTTTTGTCTACTGCTTTTTCCGGAACATGGCCTTTACTCAATTACATTGTCCAGAATTTTGTTAATCTAGTTAACCTATAGCAAATGAGTCAAAACAGTAACACGATATCATCTTTTAAAAATCTGTACATATAATAAGACATCACTGATCTACAATGTTTCAAATCTTTGAACCACAAAATTATTCATCTGATCTCTTTCTGATGGGCCCGATGAACCTGGTACATGTTTTTTTCTCACAAAGAGTAAAAACTTGAGGATTTGAGAGTGAGCCGTTCTCTGTTTATAACTCTTGCAACTGCATATTCGTGTTTTGAATTAGGGAGGACATGATCCTGAATTTGACCAAACCATTTGTGACATCTTACAGGGTCGTACCACTCCAAGGTCGGGTGGCATTCATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGCAAGTGACTCGATCTAGGAAAATTCTTAAGCTCCATGTGCAAGAGCAAGACTGCACTTAGGAGATTTTACAATAAGTTATGCGTTATGCCATTTATTATCTGTAGTTCTATTTATGAACTCAATTCCCAGTTAGCTGTGGTAGATCAGAAACACATTAAATAGCAAATGGAAAATGCTATCATTTCCAACTGCTTTTGCATTTAATGGATTGTGCTTCAGATCTACTAAACAGAATTTTGTTTCCTAAATGTAGACAATAATTGCTTTGCTCTTCCCGAAGAGCATTGCAAATATATCTCCTCTCACCCTTTTTTACCTTCTTCCACCCCCATTGTACCCATCCTCATTCTCTGTAGTGATTGGATATTATTCTGATGTAATATTTTGGCTGTGAAGTTCTCTGTTAGTACTTCAATTGAATGGCATTTTATATCTATCAGCTTCAACGCTAAGG

mRNA sequence

TTGATAGCGTAAGATATTTTTGGGGAACCAAATATAGAAGGGGTCACGTTTATCGATTAAAGCTGCGATGGGTTAGCTTAGTACACGAAAAACACATGTGTTGCCGCTGCACAACAAAGCAGCCGGACTCTTCTTCACCTTTGACGGTTAAATAGTTTCCTCTGTCGTCACATATTTGGTAGGCTCTCTCTCTTTCCGGCATGGATGCTTTGAGCGGAGGCAATGGCGGACTCTGGGGCTGGAACTTCCTCCTTCCTCATTCCAAATCTTCTCGTAACAACAAGAGAAGATCATTCGAGCCCAAATCCTCTAATTCCTTGGAAGCGACTGGTGGATCTGGTTTTCGTTTTCCTATAAAGCAGTACGTGACTGCAGGCTGTCTCACTCTCTCCGGCGACACTATTGCTCAGTTCTTTAGCCGATATCGTAAGGGAATCGCTTTGAATCCCACTTCTCTCTCTGATTCTGCCTCTGCCGACAAGATGAACATATTTTTAGAACATGATTGGATTCGGTCTTTGCGGATGGCTTCTTATGGATTTCTACTCTATGGTCCTGGATCCTTTGCATGGTACAACTATCTTGATCATGTTTTGCCTAAGAAATCGGTGGAGAATCTTATTCTTAAGGTTATCTTGAACCAAATTGTTCTTGGTCCAGCAGTTATTGGTGTTGTATTTGCATGGAACAGTCTCTGGCTAGGAAAACTCTCCCAGCTTCCTGAAATGTACCGAAAAGATGCTCTTCCTACATTGTCTTATGGGGTTAGGTTCTGGATTCCTGTCAGCATATTGAATTTTTGGGTCGTACCACTCCAAGGTCGGGTGGCATTCATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGCAAGTGACTCGATCTAGGAAAATTCTTAAGCTCCATGTGCAAGAGCAAGACTGCACTTAGGAGATTTTACAATAAGTTATGCGTTATGCCATTTATTATCTGTAGTTCTATTTATGAACTCAATTCCCAGTTAGCTGTGGTAGATCAGAAACACATTAAATAGCAAATGGAAAATGCTATCATTTCCAACTGCTTTTGCATTTAATGGATTGTGCTTCAGATCTACTAAACAGAATTTTGTTTCCTAAATGTAGACAATAATTGCTTTGCTCTTCCCGAAGAGCATTGCAAATATATCTCCTCTCACCCTTTTTTACCTTCTTCCACCCCCATTGTACCCATCCTCATTCTCTGTAGTGATTGGATATTATTCTGATGTAATATTTTGGCTGTGAAGTTCTCTGTTAGTACTTCAATTGAATGGCATTTTATATCTATCAGCTTCAACGCTAAGG

Coding sequence (CDS)

ATGGATGCTTTGAGCGGAGGCAATGGCGGACTCTGGGGCTGGAACTTCCTCCTTCCTCATTCCAAATCTTCTCGTAACAACAAGAGAAGATCATTCGAGCCCAAATCCTCTAATTCCTTGGAAGCGACTGGTGGATCTGGTTTTCGTTTTCCTATAAAGCAGTACGTGACTGCAGGCTGTCTCACTCTCTCCGGCGACACTATTGCTCAGTTCTTTAGCCGATATCGTAAGGGAATCGCTTTGAATCCCACTTCTCTCTCTGATTCTGCCTCTGCCGACAAGATGAACATATTTTTAGAACATGATTGGATTCGGTCTTTGCGGATGGCTTCTTATGGATTTCTACTCTATGGTCCTGGATCCTTTGCATGGTACAACTATCTTGATCATGTTTTGCCTAAGAAATCGGTGGAGAATCTTATTCTTAAGGTTATCTTGAACCAAATTGTTCTTGGTCCAGCAGTTATTGGTGTTGTATTTGCATGGAACAGTCTCTGGCTAGGAAAACTCTCCCAGCTTCCTGAAATGTACCGAAAAGATGCTCTTCCTACATTGTCTTATGGGGTTAGGTTCTGGATTCCTGTCAGCATATTGAATTTTTGGGTCGTACCACTCCAAGGTCGGGTGGCATTCATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGCAAGTGA

Protein sequence

MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGCLTLSGDTIAQFFSRYRKGIALNPTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPGSFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK

Homology

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BLAST of Cmc05g0125141 vs. NCBI nr
Match: XP_008449492.1 (PREDICTED: protein sym-1 [Cucumis melo])

HSP 1 Score: 464.9 bits (1195), Expect = 3.9e-127
Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60
           MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC
Sbjct: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60

Query: 61  LTLSGDTIAQFFSRYRKGIALNPTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQFFSRYRKGIALN TSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFFSRYRKGIALNSTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 230
           ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK
Sbjct: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229

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BLAST of Cmc05g0125141 vs. NCBI nr
Match: XP_004140132.1 (protein sym-1 [Cucumis sativus])

HSP 1 Score: 449.1 bits (1154), Expect = 2.2e-122
Identity = 218/229 (95.20%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60
           MDA SGGNGGLW WNFLL HSKSSRNNKRRSFEPKSSNSLEATGGSGFRFP+KQY+TAGC
Sbjct: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60

Query: 61  LTLSGDTIAQFFSRYRKGIALNPTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQF  RYRKGIALN T+LSDSASADKMNIF EHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKV+LNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 230
           ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK
Sbjct: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229

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BLAST of Cmc05g0125141 vs. NCBI nr
Match: XP_038887313.1 (protein SYM1 [Benincasa hispida])

HSP 1 Score: 422.9 bits (1086), Expect = 1.7e-114
Identity = 207/229 (90.39%), Postives = 216/229 (94.32%), Query Frame = 0


Query: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60
           MD L GGNGGLWGWNFLLP SK+SR NKRR F+PK SNSL+ATGGSGFR P+KQY+TAGC
Sbjct: 1   MDVLGGGNGGLWGWNFLLPDSKTSR-NKRRRFDPKCSNSLQATGGSGFRLPLKQYLTAGC 60

Query: 61  LTLSGDTIAQFFSRYRKGIALNPTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQF SR+R+GIALN TSLSDS SA KMNIF EHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFISRWREGIALNSTSLSDSDSAHKMNIFSEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWY YLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGK+SQLP+MYRKD
Sbjct: 121 SFAWYGYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKISQLPDMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 230
           ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK
Sbjct: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 228

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BLAST of Cmc05g0125141 vs. NCBI nr
Match: KAA0061662.1 (protein sym-1 [Cucumis melo var. makuwa] >TYK21137.1 protein sym-1 [Cucumis melo var. makuwa])

HSP 1 Score: 412.9 bits (1060), Expect = 1.8e-111
Identity = 206/224 (91.96%), Postives = 206/224 (91.96%), Query Frame = 0


Query: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60
           MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC
Sbjct: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60

Query: 61  LTLSGDTIAQFFSRYRKGIALNPTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQFFSRYRKGIALN TSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFFSRYRKGIALNSTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFW----------------VVPLQGR 209
           ALPTLSYGVRFWIPVSILNFW                VVPLQ R
Sbjct: 181 ALPTLSYGVRFWIPVSILNFWEDMILNLTKPFVTSYRVVPLQDR 224

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BLAST of Cmc05g0125141 vs. NCBI nr
Match: KAE8647344.1 (hypothetical protein Csa_003113 [Cucumis sativus])

HSP 1 Score: 396.0 bits (1016), Expect = 2.3e-106
Identity = 190/201 (94.53%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60
           MDA SGGNGGLW WNFLL HSKSSRNNKRRSFEPKSSNSLEATGGSGFRFP+KQY+TAGC
Sbjct: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60

Query: 61  LTLSGDTIAQFFSRYRKGIALNPTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQF  RYRKGIALN T+LSDSASADKMNIF EHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKV+LNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFW 202
           ALPTLSYGVRFWIPVSILNFW
Sbjct: 181 ALPTLSYGVRFWIPVSILNFW 201

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BLAST of Cmc05g0125141 vs. ExPASy Swiss-Prot
Match: Q4P9K6 (Protein SYM1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=SYM1 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.8e-13
Identity = 54/177 (30.51%), Postives = 78/177 (44.07%), Query Frame = 0


Query: 50  FPIKQYVTAGCLTLSGDTIAQFFSRYRKGIALNPTSLSDSASADKMNIFLEHDWIRSLRM 109
           FP +Q +T G L  +GDTIAQ     R                        HD  R+ R+
Sbjct: 15  FP-RQCLTGGVLFATGDTIAQQLVEKRGS---------------------RHDLARTFRL 74

Query: 110 ASYGFLLYGPGSFAWY-NYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWL- 169
           + YG  ++ P +  W+   L+ V       N+  KV L+Q +  PA + + F   ++   
Sbjct: 75  SLYGGCVFSPLASIWFGRVLERVRFSSKAANIATKVALDQAIASPAFVALFFGATTIMEG 134

Query: 170 GKLSQLPEMYRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLS 225
           G   Q       +  PTL      WIPV  LN  +VP   R+ F++V SIFWN +LS
Sbjct: 135 GSPDQAKNKIIHNWWPTLKTAWGLWIPVQTLNMALVPPSQRLLFVNVVSIFWNTFLS 169

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BLAST of Cmc05g0125141 vs. ExPASy Swiss-Prot
Match: Q54FR4 (PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.7e-12
Identity = 42/130 (32.31%), Postives = 68/130 (52.31%), Query Frame = 0


Query: 100 EHDWIRSLRMASYGFLLYGPGSFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVV 159
           ++D+ RS+RMA +GF + GP    W+ YLD   PKKS  +  +K+ ++Q+V  P    + 
Sbjct: 54  KYDFKRSMRMAVFGFAVTGPLFHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLF 113

Query: 160 FAWNSLWLGK-LSQLPEMYRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIF 219
           F+   +  GK    + E  +KD L T       W  ++ +NF  +    RV FM+V +I 
Sbjct: 114 FSGMGILEGKSKDDIVEKLKKDWLTTYVSDCVVWPFINFVNFAYISSIHRVTFMNVCNIG 173

Query: 220 WNFYLSSTMS 229
           W  +L+   S
Sbjct: 174 WGAFLAKMNS 183

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BLAST of Cmc05g0125141 vs. ExPASy Swiss-Prot
Match: Q7SCY7 (Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=sym-1 PE=3 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 3.7e-11
Identity = 42/126 (33.33%), Postives = 67/126 (53.17%), Query Frame = 0


Query: 101 HDWIRSLRMASYGFLLYGPGSFAWYNYLDH--VLPKKSVENLILKVILNQIVLGPAVIGV 160
           HD  R+ RM  YG  ++GP +  W+ +L    V+P  + + ++ +V  +Q +  P  IG+
Sbjct: 44  HDLTRTGRMVLYGGAVFGPAATTWFRFLQKRVVVPGSTNKTILARVAADQGLFAPTFIGI 103

Query: 161 VFAWNSLWLGKLSQLPEMYRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIF 220
                ++  G  + + E  +K+    LS     W  V ++NF VVPL  RV F++V SI 
Sbjct: 104 FLGSMAVLEG--TDVKEKLQKNYWEALSTNWMVWPFVQMVNFKVVPLDHRVLFVNVISIG 163

Query: 221 WNFYLS 225
           WN YLS
Sbjct: 164 WNCYLS 167

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BLAST of Cmc05g0125141 vs. ExPASy Swiss-Prot
Match: Q5TZ51 (Protein Mpv17 OS=Danio rerio OX=7955 GN=mpv17 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.3e-11
Identity = 47/177 (26.55%), Postives = 76/177 (42.94%), Query Frame = 0


Query: 54  QYVTAGCLTLSGDTIAQFFSRYRKGIALNPTSLSDSASADKMNIFLEHDWIRSLRMASYG 113
           Q +TAG L   GD I+Q     R+G+A                    H+  R+ +M S G
Sbjct: 20  QIITAGSLVGVGDVISQQLIE-RRGLA-------------------NHNARRTAKMMSIG 79

Query: 114 FLLYGPGSFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLG-KLSQ 173
           F   GP    WY  LD ++   +    + K++++Q+   P  +G          G  + +
Sbjct: 80  FFFVGPVVGGWYKVLDKLVTGGTKSAALKKMLVDQVGFAPCFLGAFLGITGTLNGLTVEE 139

Query: 174 LPEMYRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 230
                ++D    L      W PV I NF+ +PL  R+A + + ++ WN YLS   +K
Sbjct: 140 NVAKLQRDYTDALISNYYLWPPVQIANFYFIPLHHRLAVVQIVAVVWNSYLSWKANK 176

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BLAST of Cmc05g0125141 vs. ExPASy Swiss-Prot
Match: Q9NR77 (Peroxisomal membrane protein 2 OS=Homo sapiens OX=9606 GN=PXMP2 PE=1 SV=3)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 50/170 (29.41%), Postives = 80/170 (47.06%), Query Frame = 0


Query: 57  TAGCLTLSGDTIAQFFSRYRKGIALNPTSLSDSASADKMNIFLEHDWIRSLRMASYGFLL 116
           T+G L+  G+ +AQ   + RK          +S S D             LR A YGF  
Sbjct: 40  TSGILSALGNFLAQMIEKKRK--------KENSRSLDVGG---------PLRYAVYGFFF 99

Query: 117 YGPGSFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGK-LSQLPE 176
            GP S  +Y +++H +P +     + +++L+++V  PA + + F   +   GK  S    
Sbjct: 100 TGPLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDASAFAA 159

Query: 177 MYRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSS 226
             R    P L    R W P+  +N   VPL+ RV F ++A++FW  YL+S
Sbjct: 160 KMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLAS 192

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BLAST of Cmc05g0125141 vs. ExPASy TrEMBL
Match: A0A1S3BLI4 (protein sym-1 OS=Cucumis melo OX=3656 GN=LOC103491365 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 1.9e-127
Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60
           MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC
Sbjct: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60

Query: 61  LTLSGDTIAQFFSRYRKGIALNPTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQFFSRYRKGIALN TSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFFSRYRKGIALNSTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 230
           ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK
Sbjct: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229

[Close]

BLAST of Cmc05g0125141 vs. ExPASy TrEMBL
Match: A0A0A0KEM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421720 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.1e-122
Identity = 218/229 (95.20%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60
           MDA SGGNGGLW WNFLL HSKSSRNNKRRSFEPKSSNSLEATGGSGFRFP+KQY+TAGC
Sbjct: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60

Query: 61  LTLSGDTIAQFFSRYRKGIALNPTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQF  RYRKGIALN T+LSDSASADKMNIF EHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKV+LNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 230
           ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK
Sbjct: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229

[Close]

BLAST of Cmc05g0125141 vs. ExPASy TrEMBL
Match: A0A5D3DBV3 (Protein sym-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00040 PE=3 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 8.6e-112
Identity = 206/224 (91.96%), Postives = 206/224 (91.96%), Query Frame = 0


Query: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60
           MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC
Sbjct: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60

Query: 61  LTLSGDTIAQFFSRYRKGIALNPTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQFFSRYRKGIALN TSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFFSRYRKGIALNSTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFW----------------VVPLQGR 209
           ALPTLSYGVRFWIPVSILNFW                VVPLQ R
Sbjct: 181 ALPTLSYGVRFWIPVSILNFWEDMILNLTKPFVTSYRVVPLQDR 224

[Close]

BLAST of Cmc05g0125141 vs. ExPASy TrEMBL
Match: A0A6J1D1H6 (protein Mpv17 OS=Momordica charantia OX=3673 GN=LOC111016738 PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.4e-100
Identity = 185/233 (79.40%), Postives = 202/233 (86.70%), Query Frame = 0


Query: 1   MDALSGG-NGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAG 60
           MD L GG +GGLWGWNFLLP  K+SR NKRR FEPKSSNSLEAT GSGFRFP+KQ + AG
Sbjct: 1   MDLLGGGSHGGLWGWNFLLPDPKTSR-NKRRRFEPKSSNSLEATPGSGFRFPLKQSLIAG 60

Query: 61  CLTLSGDTIAQFFSRYRKGIALNPTSLSDSASADK---MNIFLEHDWIRSLRMASYGFLL 120
           CL+LSGDTIAQF  R+RKGIALN TSLS+SAS  +    NIF EHDWIR+LRM SYGFLL
Sbjct: 61  CLSLSGDTIAQFIGRWRKGIALNSTSLSNSASLSRDGFSNIFSEHDWIRALRMLSYGFLL 120

Query: 121 YGPGSFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEM 180
           YGPGSFAWYNYLDH LPK+SVENL+LKV+LNQ+VLGP VI VVFAWN++WLGK+SQLP+ 
Sbjct: 121 YGPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDK 180

Query: 181 YRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 230
           YRKDALPTL YG RFWIPV ILNFW VPLQ RV FMSVASIFWNFYLSSTMSK
Sbjct: 181 YRKDALPTLLYGFRFWIPVXILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK 232

[Close]

BLAST of Cmc05g0125141 vs. ExPASy TrEMBL
Match: A0A6J1EWS4 (protein Mpv17 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437238 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.4e-98
Identity = 180/229 (78.60%), Postives = 198/229 (86.46%), Query Frame = 0


Query: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60
           MD L GG+GGLWGWNF LP S +SR NKRRSFE KSSNSL+ATGGSG++FP+KQ +TAGC
Sbjct: 1   MDLLGGGHGGLWGWNFFLPDSNTSR-NKRRSFEAKSSNSLQATGGSGYQFPLKQSLTAGC 60

Query: 61  LTLSGDTIAQFFSRYRKGIALNPTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQ   R+RK IALN +SL     +   NIF EHDWIRSLRM SYG L+YGPG
Sbjct: 61  LTLSGDTIAQLVGRWRKEIALNSSSLEKDGVS---NIFSEHDWIRSLRMLSYGILIYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHV+PK+SV NL+LKV+LNQIVLGP VIG VFAWN++WLGK+SQLP MYRKD
Sbjct: 121 SFAWYNYLDHVMPKQSVGNLMLKVLLNQIVLGPCVIGAVFAWNNIWLGKISQLPAMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 230
           ALPTL YG RFWIPVSILNFWVVPLQ RVAFMSVASIFWNFYLSSTMSK
Sbjct: 181 ALPTLLYGFRFWIPVSILNFWVVPLQARVAFMSVASIFWNFYLSSTMSK 225

[Close]

BLAST of Cmc05g0125141 vs. TAIR 10
Match: AT2G42770.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 292.4 bits (747), Expect = 3.3e-79
Identity = 145/233 (62.23%), Postives = 177/233 (75.97%), Query Frame = 0


Query: 1   MDALS--GGNGGLWGWN-FLLPHSKSSRNNKRRSFEPKSSNSLEAT-GGSGFRFPIKQYV 60
           MDAL   GG GG WGWN F     K S  ++ +     SS+S++ +    G+RFP+KQ V
Sbjct: 1   MDALGGCGGAGGFWGWNGFDQRRKKKSSGDRGKKRNSGSSDSVDVSRDAGGYRFPLKQAV 60

Query: 61  TAGCLTLSGDTIAQFFSRYRKGIALNPTSLSDSASADKMNIFLEHDWIRSLRMASYGFLL 120
           TAG LT +GDTIAQ   R++K  AL  +S S+    +  NIF EHDWIR+LRM+SYGFLL
Sbjct: 61  TAGALTFTGDTIAQLSGRWKKRTALKQSS-SELDEGELWNIFSEHDWIRALRMSSYGFLL 120

Query: 121 YGPGSFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEM 180
           YGPGS+AWY +LDH LPK +  NL+LKV+LNQ++LGP+VI V+FAWN+LWLGKLS+L   
Sbjct: 121 YGPGSYAWYQFLDHSLPKPTATNLVLKVLLNQVILGPSVIAVIFAWNNLWLGKLSELGNK 180

Query: 181 YRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 230
           Y+KDALPTL YG RFW+PVSILNFWVVPLQ RVAFMS+ S+FWNFYLSSTMSK
Sbjct: 181 YQKDALPTLLYGFRFWVPVSILNFWVVPLQARVAFMSMGSVFWNFYLSSTMSK 232

[Close]

BLAST of Cmc05g0125141 vs. TAIR 10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15
Identity = 39/124 (31.45%), Postives = 67/124 (54.03%), Query Frame = 0


Query: 102 DWIRSLRMASYGFLLYGPGSFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFA 161
           D IR+ RMAS+G +  GP    W++YL  +LPK+ V     K+++ Q++ GP    V ++
Sbjct: 121 DLIRTARMASFGLIFLGPSQHLWFSYLSKILPKRDVLTTFKKIMMGQVLFGPVSNTVFYS 180

Query: 162 WNSLWLGKLS-QLPEMYRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWN 221
           +N+   G+ S ++    ++D LPTL  G+ +W     + F  VP+  +    S  +  W 
Sbjct: 181 YNAALQGENSEEIVARLKRDLLPTLKNGLMYWPVCDFVTFKYVPVHLQPLMNSSCAYIWT 240

Query: 222 FYLS 225
            YL+
Sbjct: 241 IYLT 244

The following BLAST results are available for this feature:

BLAST of Cmc05g0125141 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449492.1	3.9e-127	99.56	PREDICTED: protein sym-1 [Cucumis melo]	[more]
XP_004140132.1	2.2e-122	95.20	protein sym-1 [Cucumis sativus]	[more]
XP_038887313.1	1.7e-114	90.39	protein SYM1 [Benincasa hispida]	[more]
KAA0061662.1	1.8e-111	91.96	protein sym-1 [Cucumis melo var. makuwa] >TYK21137.1 protein sym-1 [Cucumis melo...	[more]
KAE8647344.1	2.3e-106	94.53	hypothetical protein Csa_003113 [Cucumis sativus]	[more]

BLAST of Cmc05g0125141 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4P9K6	8.8e-13	30.51	Protein SYM1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=SYM1 PE=3 ...	[more]
Q54FR4	5.7e-12	32.31	PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE...	[more]
Q7SCY7	3.7e-11	33.33	Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 ...	[more]
Q5TZ51	6.3e-11	26.55	Protein Mpv17 OS=Danio rerio OX=7955 GN=mpv17 PE=2 SV=1	[more]
Q9NR77	1.1e-10	29.41	Peroxisomal membrane protein 2 OS=Homo sapiens OX=9606 GN=PXMP2 PE=1 SV=3	[more]

BLAST of Cmc05g0125141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BLI4	1.9e-127	99.56	protein sym-1 OS=Cucumis melo OX=3656 GN=LOC103491365 PE=3 SV=1	[more]
A0A0A0KEM8	1.1e-122	95.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421720 PE=3 SV=1	[more]
A0A5D3DBV3	8.6e-112	91.96	Protein sym-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G0004...	[more]
A0A6J1D1H6	3.4e-100	79.40	protein Mpv17 OS=Momordica charantia OX=3673 GN=LOC111016738 PE=3 SV=1	[more]
A0A6J1EWS4	2.4e-98	78.60	protein Mpv17 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437238 PE=3 SV=1	[more]

BLAST of Cmc05g0125141 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42770.1	3.3e-79	62.23	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT5G43140.1	1.1e-15	31.45	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007248	Mpv17/PMP22	PFAM	PF04117	Mpv17_PMP22	coord: 170..224 e-value: 1.8E-14 score: 53.6
IPR007248	Mpv17/PMP22	PANTHER	PTHR11266	PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17	coord: 1..229
None	No IPR available	PANTHER	PTHR11266:SF91	EXPRESSED PROTEIN	coord: 1..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0125141.1	Cmc05g0125141.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane