Cmc05g0124341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0124341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Poly(A)-specific ribonuclease
Location	CMiso1.1chr05: 1772678 .. 1773475 (-)
RNA-Seq Expression	Cmc05g0124341
Synteny	Cmc05g0124341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAATCCAAACCCGTCAGGTCTGGGATCTCAATCTCCTTCATGAATTCAATCTCATCACTCAACTCCTCCATCGCTACCCTTTCATCTCCATCGACACTGAATTCCCCGGCGTCCTCATCCGCCCCACCCTCCACCGCCACCCTCTCCACCCTTCCGATCACTACCTCCTCCTCAAGTCCAACGTCGACGCTCTCAACCTAATCCAACTCGGTCTCACTCTCTCCGACGCCGACGGCAACCTCCCCACACTTGGCACCAAAAACTCCTTCATCTGGGAGTTCAATTTTAGAGATTTCGACGTTGCACGCCACCCCCACAACCCGGCTTCCATCGAGCTCTTAAAACAACAAGGGATCGATTTCCACCGCAACAGAACTCATGGGGTTTGCTCCTCCCAGTTCGCCGACTTGCTGATGTCATCCGGTCTTTTATGTAACAACTCCCTTACTTGGGTTACCTTTCACAGCGCCTACGACTTTGGTTACTTAGTTAAGATTCTCACTCGGACCAAACTCCCCTCACGGCTACACGATTTCTTGAACATTCTGGGGAAGTTGTTCGGGAATAAAGTTTACGACGTGAAGCACATGATGCGGTTCTGCGATGGGCTATACGGGGGTTTGGATCGGGTTGCTAAGACGCTTGATTTGGAGCGGGCGGTTGGGAAATCCCATCAGGCCGGTTCCGATTCCCTCCTCACATGGCAAGCTTTTAAGAAGATGAGGGATGTTTATTTCTCAAAGGATGGCCCGGAGAAGCACGCCGGCGTCTTGTTTGGTTTAGAAATTTATTAA

mRNA sequence

ATGTTAATCCAAACCCGTCAGGTCTGGGATCTCAATCTCCTTCATGAATTCAATCTCATCACTCAACTCCTCCATCGCTACCCTTTCATCTCCATCGACACTGAATTCCCCGGCGTCCTCATCCGCCCCACCCTCCACCGCCACCCTCTCCACCCTTCCGATCACTACCTCCTCCTCAAGTCCAACGTCGACGCTCTCAACCTAATCCAACTCGGTCTCACTCTCTCCGACGCCGACGGCAACCTCCCCACACTTGGCACCAAAAACTCCTTCATCTGGGAGTTCAATTTTAGAGATTTCGACGTTGCACGCCACCCCCACAACCCGGCTTCCATCGAGCTCTTAAAACAACAAGGGATCGATTTCCACCGCAACAGAACTCATGGGGTTTGCTCCTCCCAGTTCGCCGACTTGCTGATGTCATCCGGTCTTTTATGTAACAACTCCCTTACTTGGGTTACCTTTCACAGCGCCTACGACTTTGGTTACTTAGTTAAGATTCTCACTCGGACCAAACTCCCCTCACGGCTACACGATTTCTTGAACATTCTGGGGAAGTTGTTCGGGAATAAAGTTTACGACGTGAAGCACATGATGCGGTTCTGCGATGGGCTATACGGGGGTTTGGATCGGGTTGCTAAGACGCTTGATTTGGAGCGGGCGGTTGGGAAATCCCATCAGGCCGGTTCCGATTCCCTCCTCACATGGCAAGCTTTTAAGAAGATGAGGGATGTTTATTTCTCAAAGGATGGCCCGGAGAAGCACGCCGGCGTCTTGTTTGGTTTAGAAATTTATTAA

Coding sequence (CDS)

ATGTTAATCCAAACCCGTCAGGTCTGGGATCTCAATCTCCTTCATGAATTCAATCTCATCACTCAACTCCTCCATCGCTACCCTTTCATCTCCATCGACACTGAATTCCCCGGCGTCCTCATCCGCCCCACCCTCCACCGCCACCCTCTCCACCCTTCCGATCACTACCTCCTCCTCAAGTCCAACGTCGACGCTCTCAACCTAATCCAACTCGGTCTCACTCTCTCCGACGCCGACGGCAACCTCCCCACACTTGGCACCAAAAACTCCTTCATCTGGGAGTTCAATTTTAGAGATTTCGACGTTGCACGCCACCCCCACAACCCGGCTTCCATCGAGCTCTTAAAACAACAAGGGATCGATTTCCACCGCAACAGAACTCATGGGGTTTGCTCCTCCCAGTTCGCCGACTTGCTGATGTCATCCGGTCTTTTATGTAACAACTCCCTTACTTGGGTTACCTTTCACAGCGCCTACGACTTTGGTTACTTAGTTAAGATTCTCACTCGGACCAAACTCCCCTCACGGCTACACGATTTCTTGAACATTCTGGGGAAGTTGTTCGGGAATAAAGTTTACGACGTGAAGCACATGATGCGGTTCTGCGATGGGCTATACGGGGGTTTGGATCGGGTTGCTAAGACGCTTGATTTGGAGCGGGCGGTTGGGAAATCCCATCAGGCCGGTTCCGATTCCCTCCTCACATGGCAAGCTTTTAAGAAGATGAGGGATGTTTATTTCTCAAAGGATGGCCCGGAGAAGCACGCCGGCGTCTTGTTTGGTTTAGAAATTTATTAA

Protein sequence

MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDVYFSKDGPEKHAGVLFGLEIY

Homology

[Close]

BLAST of Cmc05g0124341 vs. NCBI nr
Match: KAA0061726.1 (putative CCR4-associated factor 1-like protein 11 [Cucumis melo var. makuwa] >TYJ96062.1 putative CCR4-associated factor 1-like protein 11 [Cucumis melo var. makuwa])

HSP 1 Score: 554.3 bits (1427), Expect = 5.7e-154
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLK 60
           MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLK
Sbjct: 1   MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLK 60

Query: 61  SNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGI 120
           SNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGI
Sbjct: 61  SNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGI 120

Query: 121 DFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDF 180
           DFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDF
Sbjct: 121 DFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDF 180

Query: 181 LNILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFK 240
           LNILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFK
Sbjct: 181 LNILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFK 240

Query: 241 KMRDVYFSKDGPEKHAGVLFGLEIY 266
           KMRDVYFSKDGPEKHAGVLFGLEIY
Sbjct: 241 KMRDVYFSKDGPEKHAGVLFGLEIY 265

[Close]

BLAST of Cmc05g0124341 vs. NCBI nr
Match: XP_008449941.1 (PREDICTED: probable CCR4-associated factor 1 homolog 11, partial [Cucumis melo])

HSP 1 Score: 545.8 bits (1405), Expect = 2.0e-151
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 6   RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDA 65
           RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDA
Sbjct: 1   RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDA 60

Query: 66  LNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGIDFHRN 125
           LNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGIDFHRN
Sbjct: 61  LNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGIDFHRN 120

Query: 126 RTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILG 185
           RTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILG
Sbjct: 121 RTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILG 180

Query: 186 KLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDV 245
           KLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDV
Sbjct: 181 KLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDV 240

Query: 246 YFSKDGPEKHAGVLFGLEIY 266
           YFSKDGPEKHAGVLFGLEIY
Sbjct: 241 YFSKDGPEKHAGVLFGLEIY 260

[Close]

BLAST of Cmc05g0124341 vs. NCBI nr
Match: XP_004140166.1 (probable CCR4-associated factor 1 homolog 9 [Cucumis sativus] >KGN48042.1 hypothetical protein Csa_004151 [Cucumis sativus])

HSP 1 Score: 513.5 bits (1321), Expect = 1.1e-141
Identity = 247/265 (93.21%), Postives = 255/265 (96.23%), Query Frame = 0


Query: 1   MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLK 60
           MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPL PSDHYLLLK
Sbjct: 1   MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLK 60

Query: 61  SNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGI 120
           SNVDALNLIQLGLTLSDA GNLPTLGTKNSFIWEFNFRDFDVAR PH P SIELLKQQGI
Sbjct: 61  SNVDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGI 120

Query: 121 DFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDF 180
           DFHRNRTHGVCSS+FADL+MSSGLLCN+SLTWVTFHSAYDFGYLVKILTRTKLPSRL DF
Sbjct: 121 DFHRNRTHGVCSSRFADLVMSSGLLCNDSLTWVTFHSAYDFGYLVKILTRTKLPSRLQDF 180

Query: 181 LNILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFK 240
           LNIL  LFG KVYDVKHMMRFCDGLYGGLDR+AKTLDL+RAVGKSHQAGSDSLLT+QAFK
Sbjct: 181 LNILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFK 240

Query: 241 KMRDVYFSKDGPEKHAGVLFGLEIY 266
           KM DVYFSKDGP+KHAGVLFGLE+Y
Sbjct: 241 KMSDVYFSKDGPDKHAGVLFGLELY 265

[Close]

BLAST of Cmc05g0124341 vs. NCBI nr
Match: XP_038901771.1 (probable CCR4-associated factor 1 homolog 11 [Benincasa hispida])

HSP 1 Score: 464.5 bits (1194), Expect = 6.0e-127
Identity = 223/265 (84.15%), Postives = 239/265 (90.19%), Query Frame = 0


Query: 1   MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLK 60
           M IQ RQVWD NL +EFNLI  L HR+PFIS+DTEFPGV+IRP LHR  L PSDHYLLLK
Sbjct: 1   MFIQIRQVWDFNLDYEFNLINHLFHRFPFISMDTEFPGVVIRPALHRPRLRPSDHYLLLK 60

Query: 61  SNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGI 120
           SNVDALNLIQ+GLTLSDADGNLPTLGT N FIWEFNFRDFDV R  H P SIELLK+QGI
Sbjct: 61  SNVDALNLIQVGLTLSDADGNLPTLGTDNCFIWEFNFRDFDVVRDLHAPDSIELLKRQGI 120

Query: 121 DFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDF 180
           DF RNR HGV SS+FA+LLMSSGLLCN+S+TWVTFHSAYDFGYLVKILTRTKLP+RLHDF
Sbjct: 121 DFERNRIHGVPSSRFAELLMSSGLLCNDSVTWVTFHSAYDFGYLVKILTRTKLPARLHDF 180

Query: 181 LNILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFK 240
           L IL  LFGNKVYDVKHMMRFCDGLYGGLDRVAKTL ++RAVGKSHQAGSDSLLTWQAF+
Sbjct: 181 LKILRGLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLAVDRAVGKSHQAGSDSLLTWQAFQ 240

Query: 241 KMRDVYFSKDGPEKHAGVLFGLEIY 266
           KMRDVYF KDGPEKHAGVL+GLE+Y
Sbjct: 241 KMRDVYFFKDGPEKHAGVLYGLEVY 265

[Close]

BLAST of Cmc05g0124341 vs. NCBI nr
Match: XP_022957732.1 (probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata] >KAG6605970.1 putative CCR4-associated factor 1-like 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 430.3 bits (1105), Expect = 1.2e-116
Identity = 205/263 (77.95%), Postives = 227/263 (86.31%), Query Frame = 0


Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSN 62
           I  R+VWD NL HEF LI +L+ RYPFIS+DTEFPGV++RP    HP  PSDHYLLLKSN
Sbjct: 10  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAF--HPSRPSDHYLLLKSN 69

Query: 63  VDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGIDF 122
           VDALNLIQ+GLTLSDADGNLPTLGT   FIWEFNFRDFDV R  H P SI+LLK+QGIDF
Sbjct: 70  VDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDF 129

Query: 123 HRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLN 182
            RNR HGV S++F++LLMSSGLLCN S++WVTFHSAYDFGYLVKILTR KLPSRL +FL 
Sbjct: 130 ERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLK 189

Query: 183 ILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKM 242
           IL   FGNKVYDVKHMMRFCD LYGGL+RVAKTL ++RAVGK HQAGSDSLLTW AF+KM
Sbjct: 190 ILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKM 249

Query: 243 RDVYFSKDGPEKHAGVLFGLEIY 266
           RDVYF KDGPEKHAGVL+GLE+Y
Sbjct: 250 RDVYFGKDGPEKHAGVLYGLEVY 270

[Close]

BLAST of Cmc05g0124341 vs. ExPASy Swiss-Prot
Match: Q9FMS6 (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana OX=3702 GN=CAF1-11 PE=2 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.5e-96
Identity = 175/268 (65.30%), Postives = 215/268 (80.22%), Query Frame = 0


Query: 2   LIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLH-RHPLHPSDHYLLLK 61
           +I  R VW  NL  EF+LI  ++  YPFIS+DTEFPGV+ +  L      +P+  Y LLK
Sbjct: 11  VIVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNPNYLYNLLK 70

Query: 62  SNVDALNLIQLGLTLSDADGNLPTLGTKNS--FIWEFNFRDFDVARHPHNPASIELLKQQ 121
           SNVDAL+LIQ+GLTLSDADGNLP LG + +  +IWEFNFRDFDV R PH P SIELL++ 
Sbjct: 71  SNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRH 130

Query: 122 GIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLH 181
           GIDF RNR  GV S +FA+L+MSSGL+CN S++WVTFHSAYDFGYLVKILTR +LP  L 
Sbjct: 131 GIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALR 190

Query: 182 DFLNILGKLFGNKVYDVKHMMRFCD-GLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQ 241
           +FL +L   FG++VYDVKH+MRFC+  LYGGLDRVA++L++ RAVGK HQAGSDSLLTWQ
Sbjct: 191 EFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQ 250

Query: 242 AFKKMRDVYFSKDGPEKHAGVLFGLEIY 266
           AF++MRD+YF +DG EKHAGVL+GLE++
Sbjct: 251 AFQRMRDLYFVEDGAEKHAGVLYGLEVF 278

[Close]

BLAST of Cmc05g0124341 vs. ExPASy Swiss-Prot
Match: Q9LXM2 (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=CAF1-9 PE=2 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.5e-96
Identity = 171/266 (64.29%), Postives = 212/266 (79.70%), Query Frame = 0


Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSN 62
           + TR+VW  NL  EF LI++++  YPFIS+DTEFPGV+ +  L     +P D Y LLK+N
Sbjct: 17  VVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRF--TNPDDLYTLLKAN 76

Query: 63  VDALNLIQLGLTLSDADGNLPTLG--TKNSFIWEFNFRDFDVARHPHNPASIELLKQQGI 122
           VDAL+LIQ+GLTLSD +GNLP LG      FIWEFNFRDFDVAR  H P SIELL++QGI
Sbjct: 77  VDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGI 136

Query: 123 DFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDF 182
           DF RN   GV S +FA+L+MSSGL+CN  ++WVTFHSAYDFGYL+KILTR +LP  L +F
Sbjct: 137 DFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEF 196

Query: 183 LNILGKLFGNKVYDVKHMMRFCD-GLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAF 242
             ++  LFG +VYDVKHMM+FC+  L+GGLDRVA+TL++ RAVGK HQAGSDSLLTW AF
Sbjct: 197 KRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAF 256

Query: 243 KKMRDVYFSKDGPEKHAGVLFGLEIY 266
           ++MRD+YF +DGPEKHAGVL+GLE++
Sbjct: 257 QRMRDLYFVQDGPEKHAGVLYGLEVF 280

[Close]

BLAST of Cmc05g0124341 vs. ExPASy Swiss-Prot
Match: Q9LEU4 (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.3e-68
Identity = 129/262 (49.24%), Postives = 185/262 (70.61%), Query Frame = 0


Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSN 62
           I  R+VWD NL+ EF LI +++ ++ +I++DTEFPGV+++P +     +   +Y  LK N
Sbjct: 10  IMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKP-VATFKYNNDLNYRTLKEN 69

Query: 63  VDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGIDF 122
           VD L LIQ+GLT SD +GNLPT GT    IW+FNFR+F++    +   SIELL+Q GIDF
Sbjct: 70  VDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCGIDF 129

Query: 123 HRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLN 182
            +N   G+   +F +L+MSSG++ N++++WVTFH  YDFGYLVK+LT  +LP +  DF  
Sbjct: 130 KKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFK 189

Query: 183 ILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKM 242
           +L   F   VYD+KH+M FC+GL+GGL+R+A+ + +ER VG  HQAGSDSLLT  +F+K+
Sbjct: 190 LLYVYFPT-VYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSFRKL 249

Query: 243 RDVYFSKDGPEKHAGVLFGLEI 265
           ++ YF     EK+ GVL+GL +
Sbjct: 250 KERYF-PGSTEKYTGVLYGLGV 267

[Close]

BLAST of Cmc05g0124341 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 258.8 bits (660), Expect = 6.5e-68
Identity = 131/263 (49.81%), Postives = 185/263 (70.34%), Query Frame = 0


Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSN 62
           IQ R+VW+ NL  E  LI +++  +PF+++DTEFPG++ RP +     +   HY  LK+N
Sbjct: 10  IQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRP-VGTFKTNTEYHYETLKTN 69

Query: 63  VDALNLIQLGLTLSDADGNLPTLGTKNSF-IWEFNFRDFDVARHPHNPASIELLKQQGID 122
           V+ L +IQLGLT SD  GNLPT GT N + IW+FNFR+FD+    +   SIELL+Q GID
Sbjct: 70  VNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGID 129

Query: 123 FHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFL 182
           F +N   G+ S +FA+LLMSSG++ N ++ WVTFHS YDFGYL+K+LT   LP     F 
Sbjct: 130 FVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFF 189

Query: 183 NILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKK 242
            ++   F  +VYD+KH+M+FC+ L+GGL+++A+ LD+ER VG  HQAGSDSLLT   F+K
Sbjct: 190 EMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCTFRK 249

Query: 243 MRDVYFSKDGPEKHAGVLFGLEI 265
           +++ +F     EK++GVL+GL +
Sbjct: 250 LQENFFI-GSMEKYSGVLYGLGV 268

[Close]

BLAST of Cmc05g0124341 vs. ExPASy Swiss-Prot
Match: Q9SAI2 (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=1 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 9.4e-67
Identity = 129/263 (49.05%), Postives = 183/263 (69.58%), Query Frame = 0


Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSN 62
           IQ R+VW+ NL  E +LI  ++  +P++++DTEFPG+++RP +     +   HY  LK+N
Sbjct: 10  IQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRP-VGTFKSNADYHYETLKTN 69

Query: 63  VDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGIDF 122
           V+ L +IQLGLT S+  GNLPT GT    IW+FNFR+FD+        SIELLKQ GID 
Sbjct: 70  VNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDL 129

Query: 123 HRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLN 182
            +N   G+ S +FA+LLMSSG++ N ++ WVTFHS YDFGYL+K+LT   LP    DF  
Sbjct: 130 AKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFK 189

Query: 183 ILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKM 242
           ++   F   VYD+KH+M+FC+ L+GGL+++A+ L++ER VG  HQAGSDSLLT   F+K+
Sbjct: 190 LINVYFPT-VYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKL 249

Query: 243 RDVYFSKDGP-EKHAGVLFGLEI 265
           ++ +F   GP  K++GVL+GL +
Sbjct: 250 KENFFV--GPLHKYSGVLYGLGV 267

[Close]

BLAST of Cmc05g0124341 vs. ExPASy TrEMBL
Match: A0A5D3B887 (Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00210 PE=3 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 2.8e-154
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLK 60
           MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLK
Sbjct: 1   MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLK 60

Query: 61  SNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGI 120
           SNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGI
Sbjct: 61  SNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGI 120

Query: 121 DFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDF 180
           DFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDF
Sbjct: 121 DFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDF 180

Query: 181 LNILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFK 240
           LNILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFK
Sbjct: 181 LNILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFK 240

Query: 241 KMRDVYFSKDGPEKHAGVLFGLEIY 266
           KMRDVYFSKDGPEKHAGVLFGLEIY
Sbjct: 241 KMRDVYFSKDGPEKHAGVLFGLEIY 265

[Close]

BLAST of Cmc05g0124341 vs. ExPASy TrEMBL
Match: A0A1S3BNU2 (Poly(A)-specific ribonuclease OS=Cucumis melo OX=3656 GN=LOC103491668 PE=3 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 9.9e-152
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 6   RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDA 65
           RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDA
Sbjct: 1   RQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSNVDA 60

Query: 66  LNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGIDFHRN 125
           LNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGIDFHRN
Sbjct: 61  LNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGIDFHRN 120

Query: 126 RTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILG 185
           RTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILG
Sbjct: 121 RTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLNILG 180

Query: 186 KLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDV 245
           KLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDV
Sbjct: 181 KLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKMRDV 240

Query: 246 YFSKDGPEKHAGVLFGLEIY 266
           YFSKDGPEKHAGVLFGLEIY
Sbjct: 241 YFSKDGPEKHAGVLFGLEIY 260

[Close]

BLAST of Cmc05g0124341 vs. ExPASy TrEMBL
Match: A0A0A0KI60 (Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_6G425790 PE=3 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 5.4e-142
Identity = 247/265 (93.21%), Postives = 255/265 (96.23%), Query Frame = 0


Query: 1   MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLK 60
           MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPL PSDHYLLLK
Sbjct: 1   MLIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLRPSDHYLLLK 60

Query: 61  SNVDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGI 120
           SNVDALNLIQLGLTLSDA GNLPTLGTKNSFIWEFNFRDFDVAR PH P SIELLKQQGI
Sbjct: 61  SNVDALNLIQLGLTLSDAHGNLPTLGTKNSFIWEFNFRDFDVARDPHAPDSIELLKQQGI 120

Query: 121 DFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDF 180
           DFHRNRTHGVCSS+FADL+MSSGLLCN+SLTWVTFHSAYDFGYLVKILTRTKLPSRL DF
Sbjct: 121 DFHRNRTHGVCSSRFADLVMSSGLLCNDSLTWVTFHSAYDFGYLVKILTRTKLPSRLQDF 180

Query: 181 LNILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFK 240
           LNIL  LFG KVYDVKHMMRFCDGLYGGLDR+AKTLDL+RAVGKSHQAGSDSLLT+QAFK
Sbjct: 181 LNILKGLFGKKVYDVKHMMRFCDGLYGGLDRLAKTLDLDRAVGKSHQAGSDSLLTFQAFK 240

Query: 241 KMRDVYFSKDGPEKHAGVLFGLEIY 266
           KM DVYFSKDGP+KHAGVLFGLE+Y
Sbjct: 241 KMSDVYFSKDGPDKHAGVLFGLELY 265

[Close]

BLAST of Cmc05g0124341 vs. ExPASy TrEMBL
Match: A0A6J1GZY2 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111459188 PE=3 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 6.0e-117
Identity = 205/263 (77.95%), Postives = 227/263 (86.31%), Query Frame = 0


Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSN 62
           I  R+VWD NL HEF LI +L+ RYPFIS+DTEFPGV++RP    HP  PSDHYLLLKSN
Sbjct: 10  IHVREVWDFNLHHEFRLINRLVDRYPFISMDTEFPGVVVRPAF--HPSRPSDHYLLLKSN 69

Query: 63  VDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGIDF 122
           VDALNLIQ+GLTLSDADGNLPTLGT   FIWEFNFRDFDV R  H P SI+LLK+QGIDF
Sbjct: 70  VDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDF 129

Query: 123 HRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLN 182
            RNR HGV S++F++LLMSSGLLCN S++WVTFHSAYDFGYLVKILTR KLPSRL +FL 
Sbjct: 130 ERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLK 189

Query: 183 ILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKM 242
           IL   FGNKVYDVKHMMRFCD LYGGL+RVAKTL ++RAVGK HQAGSDSLLTW AF+KM
Sbjct: 190 ILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKM 249

Query: 243 RDVYFSKDGPEKHAGVLFGLEIY 266
           RDVYF KDGPEKHAGVL+GLE+Y
Sbjct: 250 RDVYFGKDGPEKHAGVLYGLEVY 270

[Close]

BLAST of Cmc05g0124341 vs. ExPASy TrEMBL
Match: A0A6J1K4S7 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111490755 PE=3 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 7.9e-117
Identity = 205/263 (77.95%), Postives = 226/263 (85.93%), Query Frame = 0


Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSN 62
           I  R+VWD NL HEF LI  L+ RYPFIS+DTEFPGV++RP    HP  PSDHYLLLKSN
Sbjct: 60  IHVREVWDFNLHHEFRLINHLVDRYPFISMDTEFPGVVVRPAF--HPSRPSDHYLLLKSN 119

Query: 63  VDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGIDF 122
           VDALNLIQ+GLTLSDADGNLPTLGT   FIWEFNFRDFDV R  H P SI+LLK+QGIDF
Sbjct: 120 VDALNLIQVGLTLSDADGNLPTLGTDKRFIWEFNFRDFDVTRDLHAPDSIDLLKRQGIDF 179

Query: 123 HRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLN 182
            RNR HGV S++F++LLMSSGLLCN S++WVTFHSAYDFGYLVKILTR KLPSRL +FL 
Sbjct: 180 ERNRAHGVDSARFSELLMSSGLLCNPSVSWVTFHSAYDFGYLVKILTRRKLPSRLDEFLK 239

Query: 183 ILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKM 242
           IL   FGNKVYDVKHMMRFCD LYGGL+RVAKTL ++RAVGK HQAGSDSLLTW AF+KM
Sbjct: 240 ILKAFFGNKVYDVKHMMRFCDSLYGGLERVAKTLAVDRAVGKCHQAGSDSLLTWHAFQKM 299

Query: 243 RDVYFSKDGPEKHAGVLFGLEIY 266
           RDVYF KDGPEKHAGVL+GLE+Y
Sbjct: 300 RDVYFGKDGPEKHAGVLYGLEVY 320

[Close]

BLAST of Cmc05g0124341 vs. TAIR 10
Match: AT5G22250.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 354.0 bits (907), Expect = 1.1e-97
Identity = 175/268 (65.30%), Postives = 215/268 (80.22%), Query Frame = 0


Query: 2   LIQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLH-RHPLHPSDHYLLLK 61
           +I  R VW  NL  EF+LI  ++  YPFIS+DTEFPGV+ +  L      +P+  Y LLK
Sbjct: 11  VIVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNPNYLYNLLK 70

Query: 62  SNVDALNLIQLGLTLSDADGNLPTLGTKNS--FIWEFNFRDFDVARHPHNPASIELLKQQ 121
           SNVDAL+LIQ+GLTLSDADGNLP LG + +  +IWEFNFRDFDV R PH P SIELL++ 
Sbjct: 71  SNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRH 130

Query: 122 GIDFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLH 181
           GIDF RNR  GV S +FA+L+MSSGL+CN S++WVTFHSAYDFGYLVKILTR +LP  L 
Sbjct: 131 GIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALR 190

Query: 182 DFLNILGKLFGNKVYDVKHMMRFCD-GLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQ 241
           +FL +L   FG++VYDVKH+MRFC+  LYGGLDRVA++L++ RAVGK HQAGSDSLLTWQ
Sbjct: 191 EFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQ 250

Query: 242 AFKKMRDVYFSKDGPEKHAGVLFGLEIY 266
           AF++MRD+YF +DG EKHAGVL+GLE++
Sbjct: 251 AFQRMRDLYFVEDGAEKHAGVLYGLEVF 278

[Close]

BLAST of Cmc05g0124341 vs. TAIR 10
Match: AT3G44260.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 353.2 bits (905), Expect = 1.8e-97
Identity = 171/266 (64.29%), Postives = 212/266 (79.70%), Query Frame = 0


Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSN 62
           + TR+VW  NL  EF LI++++  YPFIS+DTEFPGV+ +  L     +P D Y LLK+N
Sbjct: 17  VVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRF--TNPDDLYTLLKAN 76

Query: 63  VDALNLIQLGLTLSDADGNLPTLG--TKNSFIWEFNFRDFDVARHPHNPASIELLKQQGI 122
           VDAL+LIQ+GLTLSD +GNLP LG      FIWEFNFRDFDVAR  H P SIELL++QGI
Sbjct: 77  VDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGI 136

Query: 123 DFHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDF 182
           DF RN   GV S +FA+L+MSSGL+CN  ++WVTFHSAYDFGYL+KILTR +LP  L +F
Sbjct: 137 DFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEF 196

Query: 183 LNILGKLFGNKVYDVKHMMRFCD-GLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAF 242
             ++  LFG +VYDVKHMM+FC+  L+GGLDRVA+TL++ RAVGK HQAGSDSLLTW AF
Sbjct: 197 KRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAF 256

Query: 243 KKMRDVYFSKDGPEKHAGVLFGLEIY 266
           ++MRD+YF +DGPEKHAGVL+GLE++
Sbjct: 257 QRMRDLYFVQDGPEKHAGVLYGLEVF 280

[Close]

BLAST of Cmc05g0124341 vs. TAIR 10
Match: AT5G10960.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 261.2 bits (666), Expect = 9.3e-70
Identity = 129/262 (49.24%), Postives = 185/262 (70.61%), Query Frame = 0


Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSN 62
           I  R+VWD NL+ EF LI +++ ++ +I++DTEFPGV+++P +     +   +Y  LK N
Sbjct: 10  IMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKP-VATFKYNNDLNYRTLKEN 69

Query: 63  VDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGIDF 122
           VD L LIQ+GLT SD +GNLPT GT    IW+FNFR+F++    +   SIELL+Q GIDF
Sbjct: 70  VDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCGIDF 129

Query: 123 HRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLN 182
            +N   G+   +F +L+MSSG++ N++++WVTFH  YDFGYLVK+LT  +LP +  DF  
Sbjct: 130 KKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFK 189

Query: 183 ILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKM 242
           +L   F   VYD+KH+M FC+GL+GGL+R+A+ + +ER VG  HQAGSDSLLT  +F+K+
Sbjct: 190 LLYVYFPT-VYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSFRKL 249

Query: 243 RDVYFSKDGPEKHAGVLFGLEI 265
           ++ YF     EK+ GVL+GL +
Sbjct: 250 KERYF-PGSTEKYTGVLYGLGV 267

[Close]

BLAST of Cmc05g0124341 vs. TAIR 10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 258.8 bits (660), Expect = 4.6e-69
Identity = 131/263 (49.81%), Postives = 185/263 (70.34%), Query Frame = 0


Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSN 62
           IQ R+VW+ NL  E  LI +++  +PF+++DTEFPG++ RP +     +   HY  LK+N
Sbjct: 10  IQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRP-VGTFKTNTEYHYETLKTN 69

Query: 63  VDALNLIQLGLTLSDADGNLPTLGTKNSF-IWEFNFRDFDVARHPHNPASIELLKQQGID 122
           V+ L +IQLGLT SD  GNLPT GT N + IW+FNFR+FD+    +   SIELL+Q GID
Sbjct: 70  VNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGID 129

Query: 123 FHRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFL 182
           F +N   G+ S +FA+LLMSSG++ N ++ WVTFHS YDFGYL+K+LT   LP     F 
Sbjct: 130 FVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFF 189

Query: 183 NILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKK 242
            ++   F  +VYD+KH+M+FC+ L+GGL+++A+ LD+ER VG  HQAGSDSLLT   F+K
Sbjct: 190 EMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCTFRK 249

Query: 243 MRDVYFSKDGPEKHAGVLFGLEI 265
           +++ +F     EK++GVL+GL +
Sbjct: 250 LQENFFI-GSMEKYSGVLYGLGV 268

[Close]

BLAST of Cmc05g0124341 vs. TAIR 10
Match: AT1G80780.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 255.0 bits (650), Expect = 6.7e-68
Identity = 129/263 (49.05%), Postives = 183/263 (69.58%), Query Frame = 0


Query: 3   IQTRQVWDLNLLHEFNLITQLLHRYPFISIDTEFPGVLIRPTLHRHPLHPSDHYLLLKSN 62
           IQ R+VW+ NL  E +LI  ++  +P++++DTEFPG+++RP +     +   HY  LK+N
Sbjct: 10  IQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRP-VGTFKSNADYHYETLKTN 69

Query: 63  VDALNLIQLGLTLSDADGNLPTLGTKNSFIWEFNFRDFDVARHPHNPASIELLKQQGIDF 122
           V+ L +IQLGLT S+  GNLPT GT    IW+FNFR+FD+        SIELLKQ GID 
Sbjct: 70  VNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDL 129

Query: 123 HRNRTHGVCSSQFADLLMSSGLLCNNSLTWVTFHSAYDFGYLVKILTRTKLPSRLHDFLN 182
            +N   G+ S +FA+LLMSSG++ N ++ WVTFHS YDFGYL+K+LT   LP    DF  
Sbjct: 130 AKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFK 189

Query: 183 ILGKLFGNKVYDVKHMMRFCDGLYGGLDRVAKTLDLERAVGKSHQAGSDSLLTWQAFKKM 242
           ++   F   VYD+KH+M+FC+ L+GGL+++A+ L++ER VG  HQAGSDSLLT   F+K+
Sbjct: 190 LINVYFPT-VYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKL 249

Query: 243 RDVYFSKDGP-EKHAGVLFGLEI 265
           ++ +F   GP  K++GVL+GL +
Sbjct: 250 KENFFV--GPLHKYSGVLYGLGV 267

The following BLAST results are available for this feature:

BLAST of Cmc05g0124341 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061726.1	5.7e-154	100.00	putative CCR4-associated factor 1-like protein 11 [Cucumis melo var. makuwa] >TY...	[more]
XP_008449941.1	2.0e-151	100.00	PREDICTED: probable CCR4-associated factor 1 homolog 11, partial [Cucumis melo]	[more]
XP_004140166.1	1.1e-141	93.21	probable CCR4-associated factor 1 homolog 9 [Cucumis sativus] >KGN48042.1 hypoth...	[more]
XP_038901771.1	6.0e-127	84.15	probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]	[more]
XP_022957732.1	1.2e-116	77.95	probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata] >KAG6605970.1 ...	[more]

BLAST of Cmc05g0124341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMS6	1.5e-96	65.30	Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9LXM2	2.5e-96	64.29	Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LEU4	1.3e-68	49.24	Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9SKZ2	6.5e-68	49.81	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SAI2	9.4e-67	49.05	Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]

BLAST of Cmc05g0124341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3B887	2.8e-154	100.00	Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BNU2	9.9e-152	100.00	Poly(A)-specific ribonuclease OS=Cucumis melo OX=3656 GN=LOC103491668 PE=3 SV=1	[more]
A0A0A0KI60	5.4e-142	93.21	Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_6G425790 PE=3 SV...	[more]
A0A6J1GZY2	6.0e-117	77.95	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111459188 PE=3...	[more]
A0A6J1K4S7	7.9e-117	77.95	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111490755 PE=3 S...	[more]

BLAST of Cmc05g0124341 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22250.1	1.1e-97	65.30	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G44260.1	1.8e-97	64.29	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G10960.1	9.3e-70	49.24	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G32070.1	4.6e-69	49.81	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.1	6.7e-68	49.05	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..264 e-value: 1.5E-90 score: 305.0
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 11..130 e-value: 2.6E-8 score: 33.5
None	No IPR available	PANTHER	PTHR10797:SF48	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED	coord: 4..265
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 4..265
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 4..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0124341.1	Cmc05g0124341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000932	P-body
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity
molecular_function	GO:0016740	transferase activity