Cmc05g0123871 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCTAATTTGGATATCCCTATTTTGAAGTTGTTTGTATTAAGAACAGACATATATAGGTTTTTAATTAGAAGATGATTTCTCACCTTCATTTTCCCTCTCTGTTGTTTGTCTCCTCCTACCTCCACCTCTCCTCTTCGACACGCTATGGCTGCTCGGAAGGAGGTAATTTAATTTTTCTTTTTTCCCTCTCCATTATTTCATTAATTTCTTTTGTTATTGTGTAATGTTTATCCCATGAGTTTATTTATTTAAATTTTCAATGTTTGAAATCTGGAGTTCAATCTCCTATGAAAATTCTCTCATTTCCTTTTTTTTTTTTCCTTTTCTTTTTATCAAATCTCATTTTCGTGTTAAAATAGTATATTTGTAGTAATGTTATATTATTATTAAGAAAAAAGAAGCATTTAGAGGATGATTATGCTTTAAGTTGATTAATTAAATATTTTGGTCTTTGCTTGAAACTTTGGGAGTCTTTTTGTATCAAAATTAGGAAGTAGAATGAATTATAGATACAAAAATTAGGTAGTAGAATGAATTATAGAGACTCAATAGTTCAAAATTTTGATTAAGAGATTGTTAATCATCCAAAATTTTAGCTAAAAGTTAGAAACATTTCATCTCAAACGTCCGAACAATGATTAAGTGCATCTCCATGTTTCCCATTCTCTATACAAAAACAATACTTTTTTAGTAATTTTTTAAAAGAATAAATTTTCACGTGATAACTTTTAATTGAGTGTAGCCGAAGTTTTTTTCTTTTCTAAAATAGAAAATGGAAAAGTTATCATAAATTTTTTTTTATTTTCTTCTCCTAAATCAAGAGAATCCTTGTATTTGATTCTCTTGCATCTGGAACAATTCCTGGCAAAAACAACCATAATGGACAAATAAGAAAACAATCAAAATCATAAAAATTGGTGATGTGAGGAAGAAAAATATGATGAATCTCTTTGAATATGCAACTAAAAGTTTGGTTGGAATATTTGTGTGTTTATGCAGAATAATAGGTGGAGATCAGTTCCAGAATTTGGGGGTTGGGATCACAATGCGCCAGGAGCAAGCAATTATTCTGTTGTATTTACTCGAGCTCGAGCCGATAGAAAACAACAAAAAACTGACTTAACTGAGTTCAAAAAAACCAGCCTAGGGAATGAAAGGGAGTTAATGGAAGCCATGGATAAAAGTCATTGTCACCAAAAACATCGCCATCATCGCCATCGCCATCACCATGAACACCAACACCGCCACCATCACCACCAACATCATCATCAACCACCCCCAGATGACTCTGTTGGCCCAGTAAGTACTTTCGTCTATTCTCTTTTAAGTACAAAAAATAGGGAAAAAGAGGACTTGAGCCTCCGACCTCAAGAAAACAACTACTTTTTTCTTGTCAATTATTATAATGAGTTATGTTTATTTTTTGCCAGCATCAGTTGTTCTTTTCCCTCTTTAATCTCAAATGAGATCTACAACTAGCCTTTTTTTTTTTTTGGATAACCCTCCCGACAAGCAACAATTGGGTGTCAAAAAAAAAAAAACACACAAAATATTAAATCCCATTCAAGTTTAACCACATATTAAATCCATTATCTCTAAGCTCTTTATCAAACCCACGGTCCTCTTCAAAAGGCCAATCGGAACTTTAAACTTAATGAAGAAAACGAAACAAGAATTCAATGTAACATTTGATAACAGAAGCTGAAAAGAATTTGTATCGAAGAAAGTACCTGTTGGATACTAAGGCTGAGGAACAGATGCTGTATGATATCCCTTAATGGGTGATTACTTTTATGCTATTCATGATGGTGGCAACTTCATTTATAGCCTTCTGTGAAGTTGCTCTTCCAGTAATTAGAGCTTTTCCCGAAGTTTAACCACAGCTGTAACTTTAAAGTAATGCGCGATTATCTTAAAATAATAAGACTACAGTTCTTATCTTACTTAGTATCTTGTTCTACTATACAATGGACATAAGCATATTTGTAATAGCATTTATAATAGCAGGCTTTGTAACGATCATTTCAAGATGGATTCTGTATTGACCTAAAAATTGATAGTAAAATAGAGACCGAAGAAACGTGAGTGATTGCAACATAATTTTTGTAAAACATATAAATTAATATAAATATTGCAAATTTAATGCTTGTTCTTTTCTTTTTTCTTATCCAGCAGAAGAAAAAGAAGATTCTGACCTACATCAATTGTTGTATCAGGCCTTGATATGAGACAGAAGCCAACTCACTCCTCTATGTTTTTGTCACATCGTGCTGTTTTTCTCAATCCTTTTTTTTTCTTGCATGTAAATGTAGATGAGACAAGTTCATCATATGGATAATTGCACGAATTTCCCCTTCCCTGCATCTTGTTTAGGCTCTTTAGCTTATAAAACATGGAACCTTGAAATTTATTTTCTTACTTCATGGAGGAAAACAAGGTAAATAAACTAT GTCTAATTTGGATATCCCTATTTTGAAGTTGTTTGTATTAAGAACAGACATATATAGGTTTTTAATTAGAAGATGATTTCTCACCTTCATTTTCCCTCTCTGTTGTTTGTCTCCTCCTACCTCCACCTCTCCTCTTCGACACGCTATGGCTGCTCGGAAGGAGAATAATAGGTGGAGATCAGTTCCAGAATTTGGGGGTTGGGATCACAATGCGCCAGGAGCAAGCAATTATTCTGTTGTATTTACTCGAGCTCGAGCCGATAGAAAACAACAAAAAACTGACTTAACTGAGTTCAAAAAAACCAGCCTAGGGAATGAAAGGGAGTTAATGGAAGCCATGGATAAAAGTCATTGTCACCAAAAACATCGCCATCATCGCCATCGCCATCACCATGAACACCAACACCGCCACCATCACCACCAACATCATCATCAACCACCCCCAGATGACTCTGTTGGCCCAAAGAAAAAGAAGATTCTGACCTACATCAATTGTTGTATCAGGCCTTGATATGAGACAGAAGCCAACTCACTCCTCTATGTTTTTGTCACATCGTGCTGTTTTTCTCAATCCTTTTTTTTTCTTGCATGTAAATGTAGATGAGACAAGTTCATCATATGGATAATTGCACGAATTTCCCCTTCCCTGCATCTTGTTTAGGCTCTTTAGCTTATAAAACATGGAACCTTGAAATTTATTTTCTTACTTCATGGAGGAAAACAAGGTAAATAAACTAT ATGGCTGCTCGGAAGGAGAATAATAGGTGGAGATCAGTTCCAGAATTTGGGGGTTGGGATCACAATGCGCCAGGAGCAAGCAATTATTCTGTTGTATTTACTCGAGCTCGAGCCGATAGAAAACAACAAAAAACTGACTTAACTGAGTTCAAAAAAACCAGCCTAGGGAATGAAAGGGAGTTAATGGAAGCCATGGATAAAAGTCATTGTCACCAAAAACATCGCCATCATCGCCATCGCCATCACCATGAACACCAACACCGCCACCATCACCACCAACATCATCATCAACCACCCCCAGATGACTCTGTTGGCCCAAAGAAAAAGAAGATTCTGACCTACATCAATTGTTGTATCAGGCCTTGA MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTRARADRKQQKTDLTEFKKTSLGNERELMEAMDKSHCHQKHRHHRHRHHHEHQHRHHHHQHHHQPPPDDSVGPKKKKILTYINCCIRP Homology
BLAST of Cmc05g0123871 vs. NCBI nr
Match: XP_038901152.1 (lateral signaling target protein 2 homolog isoform X2 [Benincasa hispida]) HSP 1 Score: 196.1 bits (497), Expect = 1.8e-46 Identity = 103/126 (81.75%), Postives = 107/126 (84.92%), Query Frame = 0
BLAST of Cmc05g0123871 vs. NCBI nr
Match: XP_038901151.1 (lateral signaling target protein 2 homolog isoform X1 [Benincasa hispida]) HSP 1 Score: 191.4 bits (485), Expect = 4.4e-45 Identity = 103/127 (81.10%), Postives = 107/127 (84.25%), Query Frame = 0
BLAST of Cmc05g0123871 vs. NCBI nr
Match: KAE8647369.1 (hypothetical protein Csa_004264 [Cucumis sativus]) HSP 1 Score: 177.6 bits (449), Expect = 6.6e-41 Identity = 96/117 (82.05%), Postives = 102/117 (87.18%), Query Frame = 0
BLAST of Cmc05g0123871 vs. NCBI nr
Match: KAG6605945.1 (hypothetical protein SDJN03_03262, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035891.1 hypothetical protein SDJN02_02690, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145.6 bits (366), Expect = 2.8e-31 Identity = 83/121 (68.60%), Postives = 94/121 (77.69%), Query Frame = 0
BLAST of Cmc05g0123871 vs. NCBI nr
Match: XP_023512838.1 (dendritic arbor reduction protein 1 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 139.0 bits (349), Expect = 2.6e-29 Identity = 77/118 (65.25%), Postives = 91/118 (77.12%), Query Frame = 0
BLAST of Cmc05g0123871 vs. ExPASy TrEMBL
Match: A0A0A0KK09 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G430670 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 5.0e-50 Identity = 111/133 (83.46%), Postives = 117/133 (87.97%), Query Frame = 0
BLAST of Cmc05g0123871 vs. ExPASy TrEMBL
Match: A0A6J1JCC4 (dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483749 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 3.7e-29 Identity = 76/118 (64.41%), Postives = 90/118 (76.27%), Query Frame = 0
BLAST of Cmc05g0123871 vs. ExPASy TrEMBL
Match: A0A6J1DJD7 (lateral signaling target protein 2 homolog OS=Momordica charantia OX=3673 GN=LOC111020600 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 3.7e-29 Identity = 82/106 (77.36%), Postives = 89/106 (83.96%), Query Frame = 0
BLAST of Cmc05g0123871 vs. ExPASy TrEMBL
Match: A0A6J1JEB9 (dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483749 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 6.3e-29 Identity = 77/119 (64.71%), Postives = 91/119 (76.47%), Query Frame = 0
BLAST of Cmc05g0123871 vs. ExPASy TrEMBL
Match: A0A6J1FX29 (dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448272 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 7.0e-28 Identity = 75/118 (63.56%), Postives = 89/118 (75.42%), Query Frame = 0
BLAST of Cmc05g0123871 vs. TAIR 10
Match: AT5G19473.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 86.7 bits (213), Expect = 1.4e-17 Identity = 54/122 (44.26%), Postives = 69/122 (56.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
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