Cmc05g0123491 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0123491
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	exopolygalacturonase-like
Location	CMiso1.1chr05: 1142321 .. 1143367 (-)
RNA-Seq Expression	Cmc05g0123491
Synteny	Cmc05g0123491

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAATTGCATGTTTTAATCACAACATGTTTATGTTTTTAGCCTAATATCTTATGTATAATTTAACCAATAGATATTTTCTCGATCATCAAACACGTTTTAACTCAAGGATTTTTTTTTGTTTGTGTAAAATGATCAGAATTTGAAGTTCAATTTCGTCACGAATTCAATAGTGAAGGACATAACGTCATTGGATAGCAAGAATTATCATTTTAATCTTTTGGCTTGCAAGAATCTTACCTTTGACCATGTGACAATTACTGCACCGGGGAATAGTCCCAACACTGATGGAATTCACGTGGGTGATTCAGAACAAATTAACATTCTCAATACCAATATCGCAACCGGAGATGATTGTATATCTGTGGGATCATCCAACAAACAAATAGTTATTAGTGAGGTTACTTGCGGACCAGGACATGGAATTAGCATAGGAAGTTTGGGAAAATATACCAACGAAAAAGAACTCATGGGAGTGACGGTGAAAAAATGCAAATTGACCGGTACTACAAATGGTGTTAGGATCAAAACATGGCCAGATTCTGCCGTCGCATTCCCAGCCTCTGACATGCATTTTGAAGATATAGAAATGGTTAATGTCAGCAACCCTGTCCTCATAGACCAAGAATACTGTCCATGGAACCAATGCAATCGAAAGGTATGTACTAAAGTTTGACCTCCTTATTTTTGAACTTATTACTTAACTCAAAAGACATTAATTTTTAAGAGTGCAATAATAATATTGTTGAGTTACGTATTTTTATTGTGTTTTCTTTGTTATTCAGGTTCCATCAAAAATTAAGATCAGCAAAGTAAGCTTCAAGAATATAAGAGGCACATCTGCGACTCCGGTTGCAGTTAAACTTGTTTGCAGTCAAAGTAATCCATGTGAGGGAGTGGAAGTTGCTGATATTGATCTCACTTATAGTGGAAGTGAAGGTCCAATTAAGTCTCAGTGTGCAAATGTGAAACCCGTCATTTCAGGGAAACAAAATCCTCCAATCTGTGCTGAACCCGCACCAGCTGGTGGTCCATCTTCCGATTGA

mRNA sequence

ATGAATTTGAAGTTCAATTTCGTCACGAATTCAATAGTGAAGGACATAACGTCATTGGATAGCAAGAATTATCATTTTAATCTTTTGGCTTGCAAGAATCTTACCTTTGACCATGTGACAATTACTGCACCGGGGAATAGTCCCAACACTGATGGAATTCACGTGGGTGATTCAGAACAAATTAACATTCTCAATACCAATATCGCAACCGGAGATGATTGTATATCTGTGGGATCATCCAACAAACAAATAGTTATTAGTGAGGTTACTTGCGGACCAGGACATGGAATTAGCATAGGAAGTTTGGGAAAATATACCAACGAAAAAGAACTCATGGGAGTGACGGTGAAAAAATGCAAATTGACCGGTACTACAAATGGTGTTAGGATCAAAACATGGCCAGATTCTGCCGTCGCATTCCCAGCCTCTGACATGCATTTTGAAGATATAGAAATGGTTAATGTCAGCAACCCTGTCCTCATAGACCAAGAATACTGTCCATGGAACCAATGCAATCGAAAGGTTCCATCAAAAATTAAGATCAGCAAAGTAAGCTTCAAGAATATAAGAGGCACATCTGCGACTCCGGTTGCAGTTAAACTTGTTTGCAGTCAAAGTAATCCATGTGAGGGAGTGGAAGTTGCTGATATTGATCTCACTTATAGTGGAAGTGAAGGTCCAATTAAGTCTCAGTGTGCAAATGTGAAACCCGTCATTTCAGGGAAACAAAATCCTCCAATCTGTGCTGAACCCGCACCAGCTGGTGGTCCATCTTCCGATTGA

Coding sequence (CDS)

ATGAATTTGAAGTTCAATTTCGTCACGAATTCAATAGTGAAGGACATAACGTCATTGGATAGCAAGAATTATCATTTTAATCTTTTGGCTTGCAAGAATCTTACCTTTGACCATGTGACAATTACTGCACCGGGGAATAGTCCCAACACTGATGGAATTCACGTGGGTGATTCAGAACAAATTAACATTCTCAATACCAATATCGCAACCGGAGATGATTGTATATCTGTGGGATCATCCAACAAACAAATAGTTATTAGTGAGGTTACTTGCGGACCAGGACATGGAATTAGCATAGGAAGTTTGGGAAAATATACCAACGAAAAAGAACTCATGGGAGTGACGGTGAAAAAATGCAAATTGACCGGTACTACAAATGGTGTTAGGATCAAAACATGGCCAGATTCTGCCGTCGCATTCCCAGCCTCTGACATGCATTTTGAAGATATAGAAATGGTTAATGTCAGCAACCCTGTCCTCATAGACCAAGAATACTGTCCATGGAACCAATGCAATCGAAAGGTTCCATCAAAAATTAAGATCAGCAAAGTAAGCTTCAAGAATATAAGAGGCACATCTGCGACTCCGGTTGCAGTTAAACTTGTTTGCAGTCAAAGTAATCCATGTGAGGGAGTGGAAGTTGCTGATATTGATCTCACTTATAGTGGAAGTGAAGGTCCAATTAAGTCTCAGTGTGCAAATGTGAAACCCGTCATTTCAGGGAAACAAAATCCTCCAATCTGTGCTGAACCCGCACCAGCTGGTGGTCCATCTTCCGATTGA

Protein sequence

MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQINILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCKLTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICAEPAPAGGPSSD

Homology

[Close]

BLAST of Cmc05g0123491 vs. NCBI nr
Match: XP_008449697.2 (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 525.8 bits (1353), Expect = 2.1e-145
Identity = 258/260 (99.23%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ
Sbjct: 167 MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 226

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           INILNTNIATGDDCISVGSSNKQIVIS+VTCGPGHGISIGSLGKYTNEKEL+GVTVKKCK
Sbjct: 227 INILNTNIATGDDCISVGSSNKQIVISDVTCGPGHGISIGSLGKYTNEKELVGVTVKKCK 286

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK
Sbjct: 287 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 346

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS
Sbjct: 347 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 406

Query: 241 GKQNPPICAEPAPAGGPSSD 261
           GKQNPPICAEPAPAGGPSSD
Sbjct: 407 GKQNPPICAEPAPAGGPSSD 426

[Close]

BLAST of Cmc05g0123491 vs. NCBI nr
Match: TYJ96129.1 (Exopolygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 525.8 bits (1353), Expect = 2.1e-145
Identity = 258/260 (99.23%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1    MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
            MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ
Sbjct: 1195 MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 1254

Query: 61   INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
            INILNTNIATGDDCISVGSSNKQIVIS+VTCGPGHGISIGSLGKYTNEKEL+GVTVKKCK
Sbjct: 1255 INILNTNIATGDDCISVGSSNKQIVISDVTCGPGHGISIGSLGKYTNEKELVGVTVKKCK 1314

Query: 121  LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
            LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK
Sbjct: 1315 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 1374

Query: 181  ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
            ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS
Sbjct: 1375 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 1434

Query: 241  GKQNPPICAEPAPAGGPSSD 261
            GKQNPPICAEPAPAGGPSSD
Sbjct: 1435 GKQNPPICAEPAPAGGPSSD 1454

[Close]

BLAST of Cmc05g0123491 vs. NCBI nr
Match: XP_008449696.2 (PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 523.5 bits (1347), Expect = 1.1e-144
Identity = 257/260 (98.85%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ
Sbjct: 156 MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 215

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           INILNTNIATGDDCISVG SNKQIVIS+VTCGPGHGISIGSLGKYTNEKEL+GVTVKKCK
Sbjct: 216 INILNTNIATGDDCISVGISNKQIVISDVTCGPGHGISIGSLGKYTNEKELVGVTVKKCK 275

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK
Sbjct: 276 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 335

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS
Sbjct: 336 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 395

Query: 241 GKQNPPICAEPAPAGGPSSD 261
           GKQNPPICAEPAPAGGPSSD
Sbjct: 396 GKQNPPICAEPAPAGGPSSD 415

[Close]

BLAST of Cmc05g0123491 vs. NCBI nr
Match: KAA0045594.1 (exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 499.2 bits (1284), Expect = 2.1e-137
Identity = 242/260 (93.08%), Postives = 250/260 (96.15%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           MNLK NFVTNSIVKDITSLDSKNYH NLL CKNLTFDHVTITAPGNSPNTDGIHV  SEQ
Sbjct: 145 MNLKLNFVTNSIVKDITSLDSKNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQ 204

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           INILNTNIATGDDCISVG +NKQ+VIS+VTCGPGHGISIGSLGKY+ EKE++GVTVKKCK
Sbjct: 205 INILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCK 264

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           LT TTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPV+IDQEYCPWNQCNRKVPSKIK
Sbjct: 265 LTDTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIK 324

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           IS VSFKNIRGTSATPVAVK+VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS
Sbjct: 325 ISNVSFKNIRGTSATPVAVKIVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 384

Query: 241 GKQNPPICAEPAPAGGPSSD 261
           GKQNPPIC EPAPAGGPSSD
Sbjct: 385 GKQNPPICGEPAPAGGPSSD 404

[Close]

BLAST of Cmc05g0123491 vs. NCBI nr
Match: XP_016903689.1 (PREDICTED: exopolygalacturonase-like, partial [Cucumis melo])

HSP 1 Score: 499.2 bits (1284), Expect = 2.1e-137
Identity = 242/260 (93.08%), Postives = 250/260 (96.15%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           MNLK NFVTNSIVKDITSLDSKNYH NLL CKNLTFDHVTITAPGNSPNTDGIHV  SEQ
Sbjct: 100 MNLKLNFVTNSIVKDITSLDSKNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQ 159

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           INILNTNIATGDDCISVG +NKQ+VIS+VTCGPGHGISIGSLGKY+ EKE++GVTVKKCK
Sbjct: 160 INILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCK 219

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           LT TTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPV+IDQEYCPWNQCNRKVPSKIK
Sbjct: 220 LTDTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIK 279

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           IS VSFKNIRGTSATPVAVK+VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS
Sbjct: 280 ISNVSFKNIRGTSATPVAVKIVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 339

Query: 241 GKQNPPICAEPAPAGGPSSD 261
           GKQNPPIC EPAPAGGPSSD
Sbjct: 340 GKQNPPICGEPAPAGGPSSD 359

[Close]

BLAST of Cmc05g0123491 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.3e-88
Identity = 152/260 (58.46%), Postives = 196/260 (75.38%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           MN  FNFV NSIV+ +TS DSKN+H  +  CKN+TFD  TITAPG+SPNTDGIH+G S  
Sbjct: 148 MNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTD 207

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           + ILNTNI TGDDC+S+G  +KQI +  V CGPGHG+S+GSLGK+T E+ + G+TVK C 
Sbjct: 208 VKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGITVKNCT 267

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           LT T NGVRIKTWPD+      SD+HFEDI M NV NPV+IDQEY PWNQC++K PSKIK
Sbjct: 268 LTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKKNPSKIK 327

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           +SK+SFKN++GTS T   V L+CS + PC+GVE+ ++DL ++G+  P  ++C NVKP+++
Sbjct: 328 LSKISFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNGA--PTTAKCTNVKPLVT 387

Query: 241 GKQNPPICAEP-APAGGPSS 260
           G    P+C  P APA   ++
Sbjct: 388 G--TAPVCQAPGAPAASTTA 403

[Close]

BLAST of Cmc05g0123491 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.3e-88
Identity = 154/252 (61.11%), Postives = 194/252 (76.98%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           MNL+   VTNSI++D+T+LDSKN+H N++ CKNLTF+   I+A   S NTDGIH+G S+ 
Sbjct: 108 MNLRLYAVTNSILRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDG 167

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           +NI+NT I TGDDCIS+G  +K I I+ +TCGPGHGIS+GSLG+Y NE+ ++G+ VK C 
Sbjct: 168 VNIINTEIKTGDDCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCT 227

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           +TG+ NGVRIKTWP S     AS+MHF+DI M +V  P+LIDQ YCP+NQC  +VPS +K
Sbjct: 228 ITGSQNGVRIKTWPKSEPG-EASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVK 287

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           +SK+SFKNI+GTS T  AVKLVCS+S PC GVE+ADIDLTYSG  GP  S C N+KP I 
Sbjct: 288 LSKISFKNIKGTSTTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIK 347

Query: 241 GKQNPPICAEPA 253
           GKQ P IC+  A
Sbjct: 348 GKQIPAICSGSA 358

[Close]

BLAST of Cmc05g0123491 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 8.0e-87
Identity = 152/251 (60.56%), Postives = 191/251 (76.10%), Query Frame = 0


Query: 2   NLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQI 61
           NL FN +TNS +KDIT+LDSK++H N+  CKNLTF    ++AP NSPNTDGIHV  S  +
Sbjct: 143 NLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSV 202

Query: 62  NILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCKL 121
           NI ++N +TGDDCISVG   +Q+ I+ VTCGPGHGIS+GSLG   +EK ++GV V+ C  
Sbjct: 203 NITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCTF 262

Query: 122 TGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIKI 181
           T T NGVRIKTWP S      +D+HFEDI + NVSNPV+IDQ YCP+N+CN+ +PS++KI
Sbjct: 263 TNTDNGVRIKTWPASHPGV-VNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVKI 322

Query: 182 SKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISG 241
           SKVSF+NI+GTS T  AV L+ S+  PCEG+EV DID+TYSG EGP KS C N+KP + G
Sbjct: 323 SKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKEGPAKSSCENIKPSLKG 382

Query: 242 KQNPPICAEPA 253
           KQNPP+C   A
Sbjct: 383 KQNPPVCTASA 392

[Close]

BLAST of Cmc05g0123491 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.5e-85
Identity = 144/253 (56.92%), Postives = 194/253 (76.68%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           +N++F+F+TN++++DITS DSK +H N+ ACKN+T + + I AP  SPNTDGIH+G SE 
Sbjct: 150 VNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEG 209

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           +NI+ ++I TGDDCIS+G   K +VI E+TCGPGHGISIGSLGK+ NE+ + G+ +  C 
Sbjct: 210 VNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCT 269

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           +T T+NG RIKTWP        S++HFEDI M NVS+P+LIDQ+YCPWN+C +   SK+K
Sbjct: 270 ITNTSNGARIKTWPGEH-GGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVK 329

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           +S +SFKNIRGTSA P A+K +CS S+PC+ VE+ADID+ ++G+E P  SQC NVKP+ S
Sbjct: 330 LSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIKHNGAE-PATSQCLNVKPITS 389

Query: 241 GKQNPPICAEPAP 254
           GK NP  C+ P P
Sbjct: 390 GKLNPIPCSGPVP 400

[Close]

BLAST of Cmc05g0123491 vs. ExPASy Swiss-Prot
Match: P35337 (Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 3.4e-85
Identity = 142/251 (56.57%), Postives = 191/251 (76.10%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           ++++F+FV N+ +KD+TSLD+KN+HFN+++ KN+TFD++ I AP  SPNTDGIH+G  E 
Sbjct: 139 ISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEG 198

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           + ILNT IATGDDCISVG   K ++I +V CGPGHGIS+GSLG+Y  E+++  +TVK C 
Sbjct: 199 VKILNTKIATGDDCISVGDGMKNLLIEKVVCGPGHGISVGSLGRYGWEQDVTDITVKNCT 258

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           L GT+NG+RIKTWP +A    A+ +HFEDI +  VSNP+LIDQEYCPWNQCN+  PS IK
Sbjct: 259 LEGTSNGLRIKTWPSAACTTTAAGIHFEDIILNKVSNPILIDQEYCPWNQCNKNKPSTIK 318

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           +  ++F+NIRGTS    AVKL+CS+ +PCE VE+ DI++ Y+G +GP   +C NV P + 
Sbjct: 319 LVDITFRNIRGTSENKDAVKLLCSKGHPCENVEIGDINIEYTGPDGPPTFECTNVTPKLV 378

Query: 241 GKQNPPICAEP 252
           G QNP  C  P
Sbjct: 379 GAQNPKACVGP 389

[Close]

BLAST of Cmc05g0123491 vs. ExPASy TrEMBL
Match: A0A5D3BAU1 (Exopolygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00950 PE=3 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.0e-145
Identity = 258/260 (99.23%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1    MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
            MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ
Sbjct: 1195 MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 1254

Query: 61   INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
            INILNTNIATGDDCISVGSSNKQIVIS+VTCGPGHGISIGSLGKYTNEKEL+GVTVKKCK
Sbjct: 1255 INILNTNIATGDDCISVGSSNKQIVISDVTCGPGHGISIGSLGKYTNEKELVGVTVKKCK 1314

Query: 121  LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
            LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK
Sbjct: 1315 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 1374

Query: 181  ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
            ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS
Sbjct: 1375 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 1434

Query: 241  GKQNPPICAEPAPAGGPSSD 261
            GKQNPPICAEPAPAGGPSSD
Sbjct: 1435 GKQNPPICAEPAPAGGPSSD 1454

[Close]

BLAST of Cmc05g0123491 vs. ExPASy TrEMBL
Match: A0A1S3BN96 (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491498 PE=3 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.0e-145
Identity = 258/260 (99.23%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ
Sbjct: 167 MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 226

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           INILNTNIATGDDCISVGSSNKQIVIS+VTCGPGHGISIGSLGKYTNEKEL+GVTVKKCK
Sbjct: 227 INILNTNIATGDDCISVGSSNKQIVISDVTCGPGHGISIGSLGKYTNEKELVGVTVKKCK 286

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK
Sbjct: 287 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 346

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS
Sbjct: 347 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 406

Query: 241 GKQNPPICAEPAPAGGPSSD 261
           GKQNPPICAEPAPAGGPSSD
Sbjct: 407 GKQNPPICAEPAPAGGPSSD 426

[Close]

BLAST of Cmc05g0123491 vs. ExPASy TrEMBL
Match: A0A1S3BML3 (LOW QUALITY PROTEIN: exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491497 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 5.1e-145
Identity = 257/260 (98.85%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ
Sbjct: 156 MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 215

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           INILNTNIATGDDCISVG SNKQIVIS+VTCGPGHGISIGSLGKYTNEKEL+GVTVKKCK
Sbjct: 216 INILNTNIATGDDCISVGISNKQIVISDVTCGPGHGISIGSLGKYTNEKELVGVTVKKCK 275

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK
Sbjct: 276 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 335

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS
Sbjct: 336 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 395

Query: 241 GKQNPPICAEPAPAGGPSSD 261
           GKQNPPICAEPAPAGGPSSD
Sbjct: 396 GKQNPPICAEPAPAGGPSSD 415

[Close]

BLAST of Cmc05g0123491 vs. ExPASy TrEMBL
Match: A0A5A7TRZ0 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00600 PE=3 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.0e-137
Identity = 242/260 (93.08%), Postives = 250/260 (96.15%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           MNLK NFVTNSIVKDITSLDSKNYH NLL CKNLTFDHVTITAPGNSPNTDGIHV  SEQ
Sbjct: 145 MNLKLNFVTNSIVKDITSLDSKNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQ 204

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           INILNTNIATGDDCISVG +NKQ+VIS+VTCGPGHGISIGSLGKY+ EKE++GVTVKKCK
Sbjct: 205 INILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCK 264

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           LT TTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPV+IDQEYCPWNQCNRKVPSKIK
Sbjct: 265 LTDTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIK 324

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           IS VSFKNIRGTSATPVAVK+VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS
Sbjct: 325 ISNVSFKNIRGTSATPVAVKIVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 384

Query: 241 GKQNPPICAEPAPAGGPSSD 261
           GKQNPPIC EPAPAGGPSSD
Sbjct: 385 GKQNPPICGEPAPAGGPSSD 404

[Close]

BLAST of Cmc05g0123491 vs. ExPASy TrEMBL
Match: A0A5D3DYI3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00050 PE=3 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.0e-137
Identity = 242/260 (93.08%), Postives = 250/260 (96.15%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           MNLK NFVTNSIVKDITSLDSKNYH NLL CKNLTFDHVTITAPGNSPNTDGIHV  SEQ
Sbjct: 145 MNLKLNFVTNSIVKDITSLDSKNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQ 204

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           INILNTNIATGDDCISVG +NKQ+VIS+VTCGPGHGISIGSLGKY+ EKE++GVTVKKCK
Sbjct: 205 INILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCK 264

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           LT TTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPV+IDQEYCPWNQCNRKVPSKIK
Sbjct: 265 LTDTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIK 324

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           IS VSFKNIRGTSATPVAVK+VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS
Sbjct: 325 ISNVSFKNIRGTSATPVAVKIVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 384

Query: 241 GKQNPPICAEPAPAGGPSSD 261
           GKQNPPIC EPAPAGGPSSD
Sbjct: 385 GKQNPPICGEPAPAGGPSSD 404

[Close]

BLAST of Cmc05g0123491 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 313.9 bits (803), Expect = 1.2e-85
Identity = 145/261 (55.56%), Postives = 194/261 (74.33%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           ++++F+FV N+ ++DI+S+D+KN+H N+L  KN+TFD+V + AP  SPNTDGIH+G SE 
Sbjct: 140 ISIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEG 199

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           + ILN+ IATGDDCISVG   K + +  V CGPGHGIS+GSLG+Y +E+++ G+TV  C 
Sbjct: 200 VKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCT 259

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           L GT NG+RIKTWP +A A  AS +HFE+I + NVSNP+LIDQEYCPWNQCN++ PS IK
Sbjct: 260 LQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIK 319

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           +  +SFKNIRGTS    AVKL+CS+++PC  VE+ +I+L Y G++GP    C+NV P + 
Sbjct: 320 LVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVSPKLV 379

Query: 241 GKQNPPIC-AEPAPAGGPSSD 261
           G QNP  C A P P      D
Sbjct: 380 GTQNPKACSAGPTPKTAAKGD 400

[Close]

BLAST of Cmc05g0123491 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 309.3 bits (791), Expect = 2.9e-84
Identity = 138/252 (54.76%), Postives = 193/252 (76.59%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           ++++F+F+ NS ++DI+S+D+KN+H N+L  KN+T +++ I AP +SPNTDGIH+G S+ 
Sbjct: 139 ISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDG 198

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           + ILN+ I+TGDDCISVG   K + + +VTCGPGHGIS+GSLG+Y +E+++ G+ V  C 
Sbjct: 199 VKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCT 258

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           L  T NG+RIKTWP +A +  ASD+HFEDI + +VSNP+LIDQEYCPWNQCN++  S IK
Sbjct: 259 LQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIK 318

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           +  +SFKNIRGTS    AVKL+CS+  PC+ VE+ DID+ Y+G++GP    C+NV P I 
Sbjct: 319 LVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKIL 378

Query: 241 GKQNPPICAEPA 253
           G Q+P  C+ PA
Sbjct: 379 GSQSPKACSAPA 390

[Close]

BLAST of Cmc05g0123491 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 307.8 bits (787), Expect = 8.5e-84
Identity = 137/251 (54.58%), Postives = 191/251 (76.10%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           ++++F+FVT++ ++ ITSLD+K++H N++  KN+TF+ V I AP  SPNTDGIHVG S+ 
Sbjct: 139 ISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDG 198

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           I I+N+ I+TGDDC+SVG   K +++  VTCGPGHGISIGSLG+Y++E+ + G+ +  C 
Sbjct: 199 IKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCT 258

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           L  T NG+RIKTWP +A    ASD+HFE+I + NVSNP+LIDQEYCPWNQCN++ PS IK
Sbjct: 259 LQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIK 318

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           ++ +SFK IRGTS    AVKL+CS+  PC+ VEV D+++ Y+G++GP   QC+NV P + 
Sbjct: 319 LANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLV 378

Query: 241 GKQNPPICAEP 252
           G Q P  C+ P
Sbjct: 379 GTQIPKACSSP 389

[Close]

BLAST of Cmc05g0123491 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 300.1 bits (767), Expect = 1.8e-81
Identity = 132/251 (52.59%), Postives = 190/251 (75.70%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           ++++F+FVTN+ ++DI+S+D+KN+H N++  KN+TFD+V I AP  SPNTDGIH+G S  
Sbjct: 140 ISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVG 199

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           ++I+N+ I+TGDDC+SVG     +++  V CGPGHGIS+GSLG+Y +E+++ G+ V  C 
Sbjct: 200 VSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCT 259

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           L  T NG+RIKTWP +A +  AS++HFE+I + NVSNP+LIDQEYCPWNQCN++  S IK
Sbjct: 260 LQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIK 319

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           ++ +SF+ IRGTS    AVKL+CS+  PCE V+V DI++ Y+G++GP    C+NV+P + 
Sbjct: 320 LANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRPKLV 379

Query: 241 GKQNPPICAEP 252
           G Q P  C  P
Sbjct: 380 GTQFPKACNTP 390

[Close]

BLAST of Cmc05g0123491 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 288.5 bits (737), Expect = 5.4e-78
Identity = 137/255 (53.73%), Postives = 181/255 (70.98%), Query Frame = 0


Query: 1   MNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQ 60
           +N++F  +TNS +  ITS +SK +H N+L CKN+T   + I AP  S NTDGIH+G S  
Sbjct: 191 INIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNG 250

Query: 61  INILNTNIATGDDCISVGSSNKQIVISEVTCGPGHGISIGSLGKYTNEKELMGVTVKKCK 120
           +N++   I TGDDC+S+G   + +++  V CGPGHGISIGSLG+Y NE+ + GVTV+KC 
Sbjct: 251 VNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCL 310

Query: 121 LTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIK 180
           +  T NGVRIKTWP S     AS++ FEDI M NVS PVLIDQEYCP+  C   VPSK+K
Sbjct: 311 IKNTDNGVRIKTWPGSPPGI-ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVK 370

Query: 181 ISKVSFKNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVIS 240
           +S V+ KNI+GTSAT VAVKL+CS+  PC  + ++DI+L ++G EGP  S C+N+KP++S
Sbjct: 371 LSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILS 430

Query: 241 GKQNPPICAEPAPAG 256
           GK  P  C E A  G
Sbjct: 431 GKLVPAACTEVAKPG 444

The following BLAST results are available for this feature:

BLAST of Cmc05g0123491 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449697.2	2.1e-145	99.23	PREDICTED: exopolygalacturonase-like [Cucumis melo]	[more]
TYJ96129.1	2.1e-145	99.23	Exopolygalacturonase [Cucumis melo var. makuwa]	[more]
XP_008449696.2	1.1e-144	98.85	PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Cucumis melo]	[more]
KAA0045594.1	2.1e-137	93.08	exopolygalacturonase-like [Cucumis melo var. makuwa]	[more]
XP_016903689.1	2.1e-137	93.08	PREDICTED: exopolygalacturonase-like, partial [Cucumis melo]	[more]

BLAST of Cmc05g0123491 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40312	3.3e-88	58.46	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
P24548	3.3e-88	61.11	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
Q05967	8.0e-87	60.56	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
Q39786	1.5e-85	56.92	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
P35337	3.4e-85	56.57	Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1	[more]

BLAST of Cmc05g0123491 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BAU1	1.0e-145	99.23	Exopolygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182...	[more]
A0A1S3BN96	1.0e-145	99.23	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491498 PE=3 SV=1	[more]
A0A1S3BML3	5.1e-145	98.85	LOW QUALITY PROTEIN: exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7TRZ0	1.0e-137	93.08	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5D3DYI3	1.0e-137	93.08	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Cmc05g0123491 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07840.1	1.2e-85	55.56	Pectin lyase-like superfamily protein	[more]
AT3G07820.1	2.9e-84	54.76	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	8.5e-84	54.58	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	1.8e-81	52.59	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	5.4e-78	53.73	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 31..57 e-value: 3.4 score: 16.7 coord: 111..132 e-value: 87.0 score: 12.0 coord: 142..163 e-value: 9500.0 score: 0.2 coord: 58..79 e-value: 2400.0 score: 4.5
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 3..236 e-value: 3.2E-80 score: 269.6
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 88..101
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 1..249 e-value: 1.9E-76 score: 259.6
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 2..252
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 2..252
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 3..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0123491.1	Cmc05g0123491.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity