Cmc05g0122991 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0122991
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr05: 865574 .. 866664 (+)
RNA-Seq Expression	Cmc05g0122991
Synteny	Cmc05g0122991

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTGTAATACCCTTGTGGGCATTTGCAAATTGGTCTCTGATTTTCCCCTGTTTCACAATAACTATTATACCCACAAACTCCACTTCCTAACCCATTATTTATACTCTCACAAATATTCGAAGGAATGAAATCTGAAACACTCTTCCAAGCCTTATCACTCTTGGAGTAAATGTATTGCCTGAAAACACCATCGTACTCCAAAATGGCTCGACGGTAGAAATTTTGTTGATTTGAGGAAGGAGTTTCTGAGGTTAAATAGGTTAAAGCAGTTCCATTTTTTGCAGAGACATAAATGGAGCCAGACAAATCAAAAACAAGTTTAAACCCAGAACCCACAGTGCCACTTGCCCAATAAGGATTCCCTTGAGAACCCAGAGGAACAATTCTTGTATACAGCACGAGATTCCCATCAGATTGCATCCTCAAATGAAATCTTCCCTCTGAGTAATTTGTTTTCGAATAGCGAGCAATGAGAATGCTGTTCTGTTTCATAACCTGTGATGGTAAAATAGTATCAGTGGGTTCATCAAAGGATTGCCATAGAACTACTTGGGAATTGTTGTTAGCAGCAGCAAGGATGAAGTTGCCGGTGTCAAGCATGGCAGCATGAGAAACCGTTGTGTTTTCAGTTCGGAAATTTGCGGTCCATATTTGGTTAGCTGTTGAGTCATTAAGCACCAGCTGACCATGAGTGGTGAGTTGGAGAATGGATCCGGAGGGGACTAAATGGTTCGGATTGGCGGACCAGACGATGGTGTTTTCAGGGATTTTGTTGAACCAAATGGCTAGTAGAAACCCATTACTTCCAATATCTAAGAAACCAAAAGCGAAGTCACCAGATGGGGAGGACCAGTAAGAATGATTGGTATGGTTGCGTGGAGATGCAATGAGAGATGAGCCTAGAGTTATATTCTTGTAAGGCTGGGAAAATGAGAAGGAGGGTAAAGAAAACAAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAACAAGGGAAAGCCATAATAAGGCAAAGAAGTTGCTATACCATAGCTTCTGCAGTGTAAGATGATGAGTCCATTTATAACAAAGAGGGATTCTCTTAATGA

mRNA sequence

CCTTGTAATACCCTTGTGGGCATTTGCAAATTGGTCTCTGATTTTCCCCTGTTTCACAATAACTATTATACCCACAAACTCCACTTCCTAACCCATTATTTATACTCTCACAAATATTCGAAGGAATGAAATCTGAAACACTCTTCCAAGCCTTATCACTCTTGGAGTAAATGTATTGCCTGAAAACACCATCGTACTCCAAAATGGCTCGACGGTAGAAATTTTGTTGATTTGAGGAAGGAGTTTCTGAGGTTAAATAGGTTAAAGCAGTTCCATTTTTTGCAGAGACATAAATGGAGCCAGACAAATCAAAAACAAGTTTAAACCCAGAACCCACAGTGCCACTTGCCCAATAAGGATTCCCTTGAGAACCCAGAGGAACAATTCTTGTATACAGCACGAGATTCCCATCAGATTGCATCCTCAAATGAAATCTTCCCTCTGAGTAATTTGTTTTCGAATAGCGAGCAATGAGAATGCTGTTCTGTTTCATAACCTGTGATGGTAAAATAGTATCAGTGGGTTCATCAAAGGATTGCCATAGAACTACTTGGGAATTGTTGTTAGCAGCAGCAAGGATGAAGTTGCCGGTGTCAAGCATGGCAGCATGAGAAACCGTTGTGTTTTCAGTTCGGAAATTTGCGGTCCATATTTGGTTAGCTGTTGAGTCATTAAGCACCAGCTGACCATGAGTGGTGAGTTGGAGAATGGATCCGGAGGGGACTAAATGGTTCGGATTGGCGGACCAGACGATGGTGTTTTCAGGGATTTTGTTGAACCAAATGGCTAGTAGAAACCCATTACTTCCAATATCTAAGAAACCAAAAGCGAAGTCACCAGATGGGGAGGACCAGTAAGAATGATTGGTATGGTTGCGTGGAGATGCAATGAGAGATGAGCCTAGAGTTATATTCTTGTAAGGCTGGGAAAATGAGAAGGAGGGTAAAGAAAACAAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAACAAGGGAAAGCCATAATAAGGCAAAGAAGTTGCTATACCATAGCTTCTGCAGTGTAAGATGATGAGTCCATTTATAACAAAGAGGGATTCTCTTAATGA

Coding sequence (CDS)

ATGGATCCGGAGGGGACTAAATGGTTCGGATTGGCGGACCAGACGATGGTGTTTTCAGGGATTTTGTTGAACCAAATGGCTAGTAGAAACCCATTACTTCCAATATCTAAGAAACCAAAAGCGAAGTCACCAGATGGGGAGGACCAGTAA

Protein sequence

MDPEGTKWFGLADQTMVFSGILLNQMASRNPLLPISKKPKAKSPDGEDQ

Homology

[Close]

BLAST of Cmc05g0122991 vs. NCBI nr
Match: CAB4281794.1 (unnamed protein product [Prunus armeniaca] >CAB4312100.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 55.5 bits (132), Expect = 1.5e-04
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 1  MDPEGTKWFGLADQTMVFSGILLNQM-ASRNPLLPISKKPKAKSPDGEDQ 50
          MDP  T++  LADQTMVFSGILLNQM   + P LP   KP+  SPDG+ Q
Sbjct: 1  MDPSCTRFCPLADQTMVFSGILLNQMDIIKPPSLPTLWKPEENSPDGDGQ 50

[Close]

BLAST of Cmc05g0122991 vs. ExPASy TrEMBL
Match: A0A6J5XE24 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS34966 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.5e-05
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 1  MDPEGTKWFGLADQTMVFSGILLNQM-ASRNPLLPISKKPKAKSPDGEDQ 50
          MDP  T++  LADQTMVFSGILLNQM   + P LP   KP+  SPDG+ Q
Sbjct: 1  MDPSCTRFCPLADQTMVFSGILLNQMDIIKPPSLPTLWKPEENSPDGDGQ 50

The following BLAST results are available for this feature:

BLAST of Cmc05g0122991 vs. NCBI nr


Match Name	E-value	Identity	Description
CAB4281794.1	1.5e-04	60.00	unnamed protein product [Prunus armeniaca] >CAB4312100.1 unnamed protein product...	[more]

BLAST of Cmc05g0122991 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc05g0122991 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J5XE24	7.5e-05	60.00	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS34966 PE=4 S...	[more]

BLAST of Cmc05g0122991 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..49

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0122991.1	Cmc05g0122991.1	mRNA