Cmc05g0121971 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0121971
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Non-structural maintenance of chromosomes element 1 homolog
Location	CMiso1.1chr05: 288711 .. 293173 (-)
RNA-Seq Expression	Cmc05g0121971
Synteny	Cmc05g0121971

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAATTAAAAAAAAAAAAGAAGAAGAAAGAGTTTTAATTGAGATTAGAGAGGGAGGGGGCGATATTTCCCGCCGTTTTGAAAGAGGATGATATCCTTCCCCAAACTTCAGTGAACTGCCGGCTAACTCTCTCACAATTTTCCTCACAAACTCACTTCTTCTCTTCTAAACTTTTGCTCCAATTGAAGAACCCTTGTTTGAATTATTTTTTCCTTTTTCATTTTCTTTTGAACATTTAGTTGTTTCTGAATTAGGGTTCACAATGCCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCGCTACTCTCTCGCGGCCCTCTCAGAGAGGATCAGTTTCATTTGCTGTTCAAGCGAATCACTGGAAAGACTCCAGGTTCTATATATATATATATATTCTGTTCGTTATCCAAGCTCATGATTTAAGCCTACGAATTCCTGCTCCATTCTGTCTTACAAACGATGTAGTATGCGTTTATTAACAAATGAATTTAAATCCTCATAAATTTCTATGCAAATGCCACGTTACTGTTGTAATCAAATGGGAATGCTAATGAAACCACTTATTGGAAGAAATTTAATATGGGTTCATATCCGTGTACGCGTTGGAATTGTTTATCCTCTTCGGAGGTTGACCCATATAGAATTTATTGTTTTCAAAGGCGATAATCAACACTCTTATAGACATTTCTCTATCCTTAATCCACCGGCTGATTTAGTGTAGGCTCAGGGGTTCAAGCCCCCTCAACTTTATTCTATTTATATACTGAAATAATATTAGAAACAGCAGCTGGCTCAGTGTTAACACTGTCCTCCAGTCTCTCTCTAAACCTAGGTTCAAGCCCAGTCCTTACATTTTTTTTCAAATTATTTTTCCTTAACTATAAAGTCTCCGTCAACAAATTTTTGTATTTGCCGTTGCCTTAATCAATAGCTTTAGCCATTTTAAATGAAGAACATCTTTAATTGATAATTTTCTGGGAAACAATATACTAGTACTACTTATTTAGGATGATGGTGAAAGCTTATGTATGTTTAATGTTTGTTTCGGTGCAGATAATGACCAGCAGGTTTTTAATAGTTACCTCCTGACTATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATATGATGGACGTGTTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCAAGCTAGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTTTAAAGCCATCGTGAGGTTCTTCAACCTTTTCTTCCGTATTTACAGTTCAGATTTGGATATCGATCAGATATCTGTTAAATAAAGATATTGAAGTTGTCATCGTCTTTATTCTTATTGGATTGGCTGTGAATGTATGCAAGTGGATCAAACGTGAGATTCCAAAAAATGTGAAAAAGATAACCTCCGTATTAGCCAAATGGTTGCAAACAACTCTCTATTAACTGTTCGACTGTCAAAAGAAAAACGGCTATAAAGCAGCTAAAGAGAGTAAAGAATCTAAAAATGGGATACATAATTCTATCAATAGTTTGTTGCAAAGTATAGGAGGCTTCCTGGACGCTCATTTCCAACCCAATAACCAAGAAGATTGCACCCCGCCTAGAGCCTCCAAAATATAATGATCTTATCAATGAGTGCATTACAAATGATAAGTGGAAAGATGCCCTCTAAATTCTGATCATCTTGGGTTTATATTGTTTGAAATATGTTATATGTTTTTCATCTCATACTAAAAAAGGGAGATATAGTCTTAATAACTCACTAAGAGGTCATGGTTCAATCTATGGTGGCTACCTACCTAGGAATTAATTTCCTATGAGTTTTCTTGACATCCAAATGTTGTAAGGTTAGGCGGGTTGTTCGGTGAGATTAGTCGAGGTGTGCATAAGCTGGTCTGAACACTTACGGATATAAAAAAAATGTTTCTCATCTCTTGTAATGATTTTTTAATTGTAACTCAAGTATTTTGTTTATTCTATCACTGTTATAAGCCCATATTCAGTTAAGTTGTTTTAAACATTCCCACTCAACTGACCACTCATTTGCCAACTCTCTCTGAGAATTTTGAGAGAGGAATGAGGGGTAGCTTCTTCAGAAATTTGATTGTTAACTTAATAGTCAACGATGGGAGCTTAGTGTTTGCATTACATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCGCTGCAGTATTTGTTAAAAACAAAAGGAATTGCTTTGTCAGGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTTAATCTGCAGCTGGAAAATCAGGTTTCTCTTGTTGTCTTTGACCAATTCTTCCATTTTGTCTAGCCCAATCTACTGAAGTGTGATGCCAGAATTCTTTTTAAGTCCATTGTCAAAGTCGGCTCCACATTTAACTGAACTTGGCTTCTCTGGTCTCTTGCTTTATAAATATGAGTATATGACTACCTTCAGCTACTATGTGGTATTACGTACTGTGGACAGAAACATTTCACATTTTTCACGTTTCTTGTGGAGAGATTTCTTTGGAATGAATTTCACAAGGGTATAAACTCATATTTAGATTATACCATTTATAGATTCTTGAATTATGATTTTATGCTAGCTTCATTTTTCTTAAACTTAGATATTGAGAATGAAGTTTTAAGAGTTCTCTACATGGTAAAGGCTCGTATCTTATCAATCAAATTGGGATATTGGAACTGTTAGTCTGACAGTAGCATGAATGACTTTAGTAATTTTCTACATGCATTCAATTATTTGCTATGGAGCCACTCTGAAATTTGTTGTTTTTACTTCTTTCTTTTCTGATACTTGAATGTGTATAACTGTTAAATTTCAAACCAAGAGTTTAAGGCCGCTTTTAAATTCTACACGATTTGGTTGCAAGGCTTTTGATTTGCTAAATGTCACCATTGTGGGTAAAGTTGAAAAGAGAACCGACAAACGTTCCAGCCCCTTGTATTTGTATCAATGTATGCATTTATCTGCTTCTTCACATATTTAAGGATTCTATTGTATAATACTCATGTGCATTGTTTGACTATTGCTGTTTTTAACTGCCAGCTGGGGGATACAGGGCCCCAGTCCCAAGTCATACCAGCTGCTTTCAAGAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCCGAGCTTGCTCAGGATAAGTGGCTTGATTGCACCCCTGAAGGCTTCGTAAATTTGGGCGTCCGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCAGCAATGACGTACCTTCATGTGAAGTGTGCAATGAAGCTGGTGTGAAGGTTCTCTTCTTGATTGGAGGCCTCTCTTTTTCCTTTTCTTGTGGGCTCTGTTTTTATGTCCTTTCATTCTCTCCTTCTTTATTAAAGAAAATTCAGTTTCACATAAAAAATAAGCTTTGTATGCTGCATTATTTTACCAAATTGCCACACTGATAAGATAATCTGAACATTTTGATTTATTTATTTATTTATAAATGTTAGCAATGCAATCGGGTTTAGGTTACAAAGTGATTATCATTTTATCTCAAATTGTATAGCTGCATTATTTTACTCAATGCCCCCACTGATAGAAGAACCTAAGCTCCATATAGTTTTGCTGTAGAGACTGATAAGAAACTTATCCCCACGATGATTTATATTTTTGTTGGGCTTGTCATTCACAGGCAGAGTTGTGTAGTAGTGAAGTTTGCACCGTCCGTGTCCATCGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGGTAACAAGAATATGATGTGGTACCTCCTATTTAAATTTTTAATCAGTAAAATCTCTCGGGCCTAATAGTTCTTTCATTGACTACTATTAGAGTAAAAGGGCCTGTCCAGGTTGTGGCACTCGATGGCAATCTACAATGTCCAACATAGAGTCCAAGGAGGAAGTGGATGAGCCGGATACACGCACCCAAGATCAACCATCATCACATAAGAGGAAGAAATCCAAGTTGAACGTAGATATTGATTTAGGACCAAACGAAGACAGTACTGCAGAAGCTTCCCAACCTCCTCCAGATACAAGGAGAGCAACACGAAATTCTACACGCCAGCGGTAGGTCTTGGAATGAGGTACTGTTAATTTAATACCGTTTCATGGATCCTATTATTAGTTTAGGAGTTGTAAAGTGTGCAACAACTGCACTTTTTGATGTCGTGTGTCAAAATTGTCACCCTATTTAGATTTATTTGAAGTGTCATTTTAAAATCTTTATACCCAGAACCGGAATGCAAAGTGCATTACGCTACGTAAGCCAGAAGTAGAAGTTTTTTTTTTTTACCTCCCCTAAACTGTAGCTTTGGTTCTCCTTTATGTTCTCTATAAATGCAAGGAACCTGCTCTTCCTTTGTAAGTATTCAATTTTCTTTTTGCCTAAGATAGTTTGATTGTGTGG

mRNA sequence

AATAATTAAAAAAAAAAAAGAAGAAGAAAGAGTTTTAATTGAGATTAGAGAGGGAGGGGGCGATATTTCCCGCCGTTTTGAAAGAGGATGATATCCTTCCCCAAACTTCAGTGAACTGCCGGCTAACTCTCTCACAATTTTCCTCACAAACTCACTTCTTCTCTTCTAAACTTTTGCTCCAATTGAAGAACCCTTGTTTGAATTATTTTTTCCTTTTTCATTTTCTTTTGAACATTTAGTTGTTTCTGAATTAGGGTTCACAATGCCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCGCTACTCTCTCGCGGCCCTCTCAGAGAGGATCAGTTTCATTTGCTGTTCAAGCGAATCACTGGAAAGACTCCAGATAATGACCAGCAGGTTTTTAATAGTTACCTCCTGACTATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATATGATGGACGTGTTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCAAGCTAGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTTTAAAGCCATCGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTTAATCTGCAGCTGGAAAATCAGGCTTTTGATTTGCTAAATGTCACCATTGTGGGTAAAGTTGAAAAGAGAACCGACAAACGTTCCAGCCCCTTGTATTTGTATCAATGGCCCCAGTCCCAAGTCATACCAGCTGCTTTCAAGAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCCGAGCTTGCTCAGGATAAGTGGCTTGATTGCACCCCTGAAGGCTTCGTAAATTTGGGCGTCCGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCAGCAATGACGTACCTTCATGTGAAGTGTGCAATGAAGCTGGTGTGAAGGCAGAGTTGTGTAGTAGTGAAGTTTGCACCGTCCGTGTCCATCGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCCTGTCCAGGTTGTGGCACTCGATGGCAATCTACAATGTCCAACATAGAGTCCAAGGAGGAAGTGGATGAGCCGGATACACGCACCCAAGATCAACCATCATCACATAAGAGGAAGAAATCCAAGTTGAACGTAGATATTGATTTAGGACCAAACGAAGACAGTACTGCAGAAGCTTCCCAACCTCCTCCAGATACAAGGAGAGCAACACGAAATTCTACACGCCAGCGGTAGGTCTTGGAATGAGGTACTGTTAATTTAATACCGTTTCATGGATCCTATTATTAGTTTAGGAGTTGTAAAGTGTGCAACAACTGCACTTTTTGATGTCGTGTGTCAAAATTGTCACCCTATTTAGATTTATTTGAAGTGTCATTTTAAAATCTTTATACCCAGAACCGGAATGCAAAGTGCATTACGCTACGTAAGCCAGAAGTAGAAGTTTTTTTTTTTTACCTCCCCTAAACTGTAGCTTTGGTTCTCCTTTATGTTCTCTATAAATGCAAGGAACCTGCTCTTCCTTTGTAAGTATTCAATTTTCTTTTTGCCTAAGATAGTTTGATTGTGTGG

Coding sequence (CDS)

ATGCCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCGCTACTCTCTCGCGGCCCTCTCAGAGAGGATCAGTTTCATTTGCTGTTCAAGCGAATCACTGGAAAGACTCCAGATAATGACCAGCAGGTTTTTAATAGTTACCTCCTGACTATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATATGATGGACGTGTTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCAAGCTAGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTTTAAAGCCATCGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTTAATCTGCAGCTGGAAAATCAGGCTTTTGATTTGCTAAATGTCACCATTGTGGGTAAAGTTGAAAAGAGAACCGACAAACGTTCCAGCCCCTTGTATTTGTATCAATGGCCCCAGTCCCAAGTCATACCAGCTGCTTTCAAGAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCCGAGCTTGCTCAGGATAAGTGGCTTGATTGCACCCCTGAAGGCTTCGTAAATTTGGGCGTCCGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCAGCAATGACGTACCTTCATGTGAAGTGTGCAATGAAGCTGGTGTGAAGGCAGAGTTGTGTAGTAGTGAAGTTTGCACCGTCCGTGTCCATCGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCCTGTCCAGGTTGTGGCACTCGATGGCAATCTACAATGTCCAACATAGAGTCCAAGGAGGAAGTGGATGAGCCGGATACACGCACCCAAGATCAACCATCATCACATAAGAGGAAGAAATCCAAGTTGAACGTAGATATTGATTTAGGACCAAACGAAGACAGTACTGCAGAAGCTTCCCAACCTCCTCCAGATACAAGGAGAGCAACACGAAATTCTACACGCCAGCGGTAG

Protein sequence

MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISNISALNLQLENQAFDLLNVTIVGKVEKRTDKRSSPLYLYQWPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR

Homology

[Close]

BLAST of Cmc05g0121971 vs. NCBI nr
Match: XP_031740711.1 (non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus] >XP_031740712.1 non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus])

HSP 1 Score: 614.4 bits (1583), Expect = 5.9e-172
Identity = 311/341 (91.20%), Postives = 319/341 (93.55%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           MPELSWRHHTLIQSLLSRGPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA FKAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120

Query: 121 ISALNLQLENQAFDLLNVTIVGKVEKRTDKRSSPLYLYQ-----WPQSQVIPAAFKNFSK 180
           ISALNLQLENQAFDL N TIVGKVEKRT KRSSPL LYQ      P    +PAAFKNFSK
Sbjct: 121 ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK 180

Query: 181 SHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 240
           SHKEKTIAELAQDKWLDCTP+GFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS
Sbjct: 181 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 240

Query: 241 SEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSH 300
           +EVCTVRVH+YCLKKMLSNKKSK+ACPGCGTRWQST SNIE KEE DEPDTRTQDQPSSH
Sbjct: 241 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 300

Query: 301 KRKKSKLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR 337
           KRKKS+LNVDIDLGPNEDSTAEASQPPP TRR TR+S RQR
Sbjct: 301 KRKKSRLNVDIDLGPNEDSTAEASQPPP-TRRTTRSSARQR 340

[Close]

BLAST of Cmc05g0121971 vs. NCBI nr
Match: KAE8649414.1 (hypothetical protein Csa_021680 [Cucumis sativus])

HSP 1 Score: 614.4 bits (1583), Expect = 5.9e-172
Identity = 311/341 (91.20%), Postives = 319/341 (93.55%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           MPELSWRHHTLIQSLLSRGPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 97  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 156

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA FKAIVEAIAQD SAQGGISN
Sbjct: 157 FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 216

Query: 121 ISALNLQLENQAFDLLNVTIVGKVEKRTDKRSSPLYLYQ-----WPQSQVIPAAFKNFSK 180
           ISALNLQLENQAFDL N TIVGKVEKRT KRSSPL LYQ      P    +PAAFKNFSK
Sbjct: 217 ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK 276

Query: 181 SHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 240
           SHKEKTIAELAQDKWLDCTP+GFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS
Sbjct: 277 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 336

Query: 241 SEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSH 300
           +EVCTVRVH+YCLKKMLSNKKSK+ACPGCGTRWQST SNIE KEE DEPDTRTQDQPSSH
Sbjct: 337 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 396

Query: 301 KRKKSKLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR 337
           KRKKS+LNVDIDLGPNEDSTAEASQPPP TRR TR+S RQR
Sbjct: 397 KRKKSRLNVDIDLGPNEDSTAEASQPPP-TRRTTRSSARQR 436

[Close]

BLAST of Cmc05g0121971 vs. NCBI nr
Match: XP_008449859.1 (PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis melo])

HSP 1 Score: 605.5 bits (1560), Expect = 2.7e-169
Identity = 308/336 (91.67%), Postives = 308/336 (91.67%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQAFDLLNVTIVGKVEKRTDKRSSPLYLYQWPQSQVIPAAFKNFSKSHKEK 180
           ISALNLQLENQ  D                          PQSQVIPAAFKNFSKSHKEK
Sbjct: 121 ISALNLQLENQLGD------------------------TGPQSQVIPAAFKNFSKSHKEK 180

Query: 181 TIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCT 240
           TIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCT
Sbjct: 181 TIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCT 240

Query: 241 VRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKS 300
           VRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKS
Sbjct: 241 VRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKS 300

Query: 301 KLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR 337
           KLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR
Sbjct: 301 KLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR 312

[Close]

BLAST of Cmc05g0121971 vs. NCBI nr
Match: XP_038900599.1 (non-structural maintenance of chromosomes element 1 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 532.7 bits (1371), Expect = 2.3e-147
Identity = 273/336 (81.25%), Postives = 288/336 (85.71%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           MPELSWRHHTLIQ+LL+RGPLRED FHLLF RITGKTPDNDQQ+FNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQALLARGPLREDHFHLLFTRITGKTPDNDQQLFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF+KAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQAFDLLNVTIVGKVEKRTDKRSSPLYLYQWPQSQVIPAAFKNFSKSHKEK 180
           ISALNLQLENQ  D                           QSQVIPAAFKNFS S KEK
Sbjct: 121 ISALNLQLENQMGD------------------------TGSQSQVIPAAFKNFSISLKEK 180

Query: 181 TIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCT 240
           TIAELAQDKWL C+P+GFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELC++E CT
Sbjct: 181 TIAELAQDKWLSCSPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCNTEDCT 240

Query: 241 VRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKS 300
           VRVHRYCLKKMLSNKKSKRACPGCG +W+ST SNIES+EE DEPDT TQDQPSSHKRKKS
Sbjct: 241 VRVHRYCLKKMLSNKKSKRACPGCGIQWRSTASNIESREEEDEPDTHTQDQPSSHKRKKS 300

Query: 301 KLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR 337
           +LN+DIDLG NED  AEA QPP  +RRATR S R R
Sbjct: 301 RLNIDIDLGSNEDCMAEAFQPPA-SRRATRRSARPR 311

[Close]

BLAST of Cmc05g0121971 vs. NCBI nr
Match: XP_038900598.1 (non-structural maintenance of chromosomes element 1 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 532.7 bits (1371), Expect = 2.3e-147
Identity = 273/336 (81.25%), Postives = 288/336 (85.71%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           MPELSWRHHTLIQ+LL+RGPLRED FHLLF RITGKTPDNDQQ+FNSYLLTINKALSFAQ
Sbjct: 23  MPELSWRHHTLIQALLARGPLREDHFHLLFTRITGKTPDNDQQLFNSYLLTINKALSFAQ 82

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF+KAIVEAIAQDPSAQGGISN
Sbjct: 83  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 142

Query: 121 ISALNLQLENQAFDLLNVTIVGKVEKRTDKRSSPLYLYQWPQSQVIPAAFKNFSKSHKEK 180
           ISALNLQLENQ  D                           QSQVIPAAFKNFS S KEK
Sbjct: 143 ISALNLQLENQMGD------------------------TGSQSQVIPAAFKNFSISLKEK 202

Query: 181 TIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCT 240
           TIAELAQDKWL C+P+GFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELC++E CT
Sbjct: 203 TIAELAQDKWLSCSPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCNTEDCT 262

Query: 241 VRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKS 300
           VRVHRYCLKKMLSNKKSKRACPGCG +W+ST SNIES+EE DEPDT TQDQPSSHKRKKS
Sbjct: 263 VRVHRYCLKKMLSNKKSKRACPGCGIQWRSTASNIESREEEDEPDTHTQDQPSSHKRKKS 322

Query: 301 KLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR 337
           +LN+DIDLG NED  AEA QPP  +RRATR S R R
Sbjct: 323 RLNIDIDLGSNEDCMAEAFQPPA-SRRATRRSARPR 333

[Close]

BLAST of Cmc05g0121971 vs. ExPASy Swiss-Prot
Match: Q6PAF4 (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX=8355 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.1e-09
Identity = 55/233 (23.61%), Postives = 92/233 (39.48%), Query Frame = 0


Query: 71  DGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISNISALNLQLEN 130
           DG  YY LVN V +D +K+ + Y+  ++  F+  +E I    S  G  ++IS LNL  E 
Sbjct: 73  DGLTYYALVNRVENDITKMASDYAENELELFRKTMELIIL--SDNGFATSISILNLADEL 132

Query: 131 QAFDLLNVTIVGKVEKRTDKRSSPLYLYQWPQSQVIPAAFKNFSKSHKEKTIAELAQDKW 190
           Q+                                      K   K   E+ +    Q+KW
Sbjct: 133 QS--------------------------------------KKMKKKEVEQLLQSFVQEKW 192

Query: 191 LDCTPEGFVNLGVRSFLDLRSWFRS--NDVPS-CEVCNEAGVKAELCSSEVCTVRVHRYC 250
           L     G   L  R  ++L  + R+   DV   C VC +  ++++LC  E C + +H  C
Sbjct: 193 L-IGRNGEYTLHTRCIMELEHYIRNTYQDVAKICNVCRKVAIQSQLC--ENCGIPLHLQC 252

Query: 251 LKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKS 301
             K   + K+   CP C   W   + ++          ++T+     ++R K+
Sbjct: 253 AGKYF-HGKANPTCPNCNESWPHEIPDLNQVSSQGPSHSQTETVRGRNQRSKN 261

[Close]

BLAST of Cmc05g0121971 vs. ExPASy Swiss-Prot
Match: Q6P881 (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicalis OX=8364 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.8e-06
Identity = 63/303 (20.79%), Postives = 113/303 (37.29%), Query Frame = 0


Query: 3   ELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDN-DQQVFNSYLLTINKALSFAQF 62
           +++  H   +Q L+S G +       L +        N      + ++  +NK L     
Sbjct: 4   QINESHQRFLQVLMSHGIMESSLVRALHRHCCEVHKVNYMHDNLDDFVGVLNKHLQPLFM 63

Query: 63  ELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISNI 122
           ++     + DG  YY LVN V +D +K+ + Y+  ++  F+  +E I    S  G    I
Sbjct: 64  KIEKGVGEEDGLTYYALVNRVENDITKMASDYAENELELFRKTMELII--ISENGFAPPI 123

Query: 123 SALNLQLENQAFDLLNVTIVGKVEKRTDKRSSPLYLYQWPQSQVIPAAFKNFSKSHKEKT 182
           S LNL  E Q+                                      K   K   E+ 
Sbjct: 124 SILNLADELQS--------------------------------------KKMKKKEVEQL 183

Query: 183 IAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRS--NDVPS-CEVCNEAGVKAELCSSEV 242
           +    QDKWL     G   L  R  ++L  +  +   DV   C VC++  ++ +LC  E 
Sbjct: 184 LQSFVQDKWL-IGRNGEYTLHTRCIMELEHYILNTYQDVAKICNVCHKIAIQCQLC--EN 243

Query: 243 CTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRK 302
           C + +H  C   +     +   CP C   W   + ++   +   +  + +Q  P   + +
Sbjct: 244 CGIPLHLQC-AGIYFRGIANPLCPNCKESWPHEIPDL--SQVSSQGPSHSQAAPVRGRNQ 260

[Close]

BLAST of Cmc05g0121971 vs. ExPASy TrEMBL
Match: A0A1S3BMD8 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucumis melo OX=3656 GN=LOC103491611 PE=3 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 1.3e-169
Identity = 308/336 (91.67%), Postives = 308/336 (91.67%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQAFDLLNVTIVGKVEKRTDKRSSPLYLYQWPQSQVIPAAFKNFSKSHKEK 180
           ISALNLQLENQ  D                          PQSQVIPAAFKNFSKSHKEK
Sbjct: 121 ISALNLQLENQLGD------------------------TGPQSQVIPAAFKNFSKSHKEK 180

Query: 181 TIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCT 240
           TIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCT
Sbjct: 181 TIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCT 240

Query: 241 VRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKS 300
           VRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKS
Sbjct: 241 VRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKS 300

Query: 301 KLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR 337
           KLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR
Sbjct: 301 KLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR 312

[Close]

BLAST of Cmc05g0121971 vs. ExPASy TrEMBL
Match: A0A0A0KZ19 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucumis sativus OX=3659 GN=Csa_4G269750 PE=3 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 3.6e-159
Identity = 292/336 (86.90%), Postives = 299/336 (88.99%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           MPELSWRHHTLIQSLLSRGPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA FKAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120

Query: 121 ISALNLQLENQAFDLLNVTIVGKVEKRTDKRSSPLYLYQWPQSQVIPAAFKNFSKSHKEK 180
           ISALNLQLENQ  D                           QSQVIPAAFKNFSKSHKEK
Sbjct: 121 ISALNLQLENQLGD------------------------TGSQSQVIPAAFKNFSKSHKEK 180

Query: 181 TIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCT 240
           TIAELAQDKWLDCTP+GFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS+EVCT
Sbjct: 181 TIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCT 240

Query: 241 VRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKS 300
           VRVH+YCLKKMLSNKKSK+ACPGCGTRWQST SNIE KEE DEPDTRTQDQPSSHKRKKS
Sbjct: 241 VRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKS 300

Query: 301 KLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR 337
           +LNVDIDLGPNEDSTAEASQPPP TRR TR+S RQR
Sbjct: 301 RLNVDIDLGPNEDSTAEASQPPP-TRRTTRSSARQR 311

[Close]

BLAST of Cmc05g0121971 vs. ExPASy TrEMBL
Match: A0A6J1JYV1 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490968 PE=3 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.9e-139
Identity = 258/338 (76.33%), Postives = 282/338 (83.43%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M ELSWRHHTLIQ+LL+RGPLRED FHLLF RIT K+PDND+Q+FN+YLLT+NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF+KAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQAFDLLNVTIVGKVEKRTDKRSSPLYLYQWPQSQVIPAAFKNFSKSHKEK 180
           I+AL+LQLENQ  D                           QS VIP AFKNFS S KEK
Sbjct: 121 IAALHLQLENQLGD------------------------AGSQSHVIPPAFKNFSISLKEK 180

Query: 181 TIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCT 240
           TIAELAQD+WL+CTP+GFVNLGVRSFLDLRSWFR+ND+PSCEVCNEAGVKAELCS+E CT
Sbjct: 181 TIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCT 240

Query: 241 VRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKS 300
           VRVHRYCLKKMLSNKKSKRACP CGT+W+ST  N+E KEE DEPD R Q Q SSHKRKK+
Sbjct: 241 VRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKT 300

Query: 301 KLNVDIDLGPNEDS--TAEASQPPPDTRRATRNSTRQR 337
           +LN DID GPN DS   A+ASQPPPDTRR TR+S  QR
Sbjct: 301 RLNRDIDSGPNGDSVAAAQASQPPPDTRRITRSSAHQR 314

[Close]

BLAST of Cmc05g0121971 vs. ExPASy TrEMBL
Match: A0A6J1K5P2 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490968 PE=3 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.9e-139
Identity = 258/338 (76.33%), Postives = 282/338 (83.43%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M ELSWRHHTLIQ+LL+RGPLRED FHLLF RIT K+PDND+Q+FN+YLLT+NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF+KAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQAFDLLNVTIVGKVEKRTDKRSSPLYLYQWPQSQVIPAAFKNFSKSHKEK 180
           I+AL+LQLENQ  D                           QS VIP AFKNFS S KEK
Sbjct: 121 IAALHLQLENQLGD------------------------AGSQSHVIPPAFKNFSISLKEK 180

Query: 181 TIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCT 240
           TIAELAQD+WL+CTP+GFVNLGVRSFLDLRSWFR+ND+PSCEVCNEAGVKAELCS+E CT
Sbjct: 181 TIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCT 240

Query: 241 VRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKS 300
           VRVHRYCLKKMLSNKKSKRACP CGT+W+ST  N+E KEE DEPD R Q Q SSHKRKK+
Sbjct: 241 VRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKT 300

Query: 301 KLNVDIDLGPNEDS--TAEASQPPPDTRRATRNSTRQR 337
           +LN DID GPN DS   A+ASQPPPDTRR TR+S  QR
Sbjct: 301 RLNRDIDSGPNGDSVAAAQASQPPPDTRRITRSSAHQR 314

[Close]

BLAST of Cmc05g0121971 vs. ExPASy TrEMBL
Match: A0A6J1DI86 (Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charantia OX=3673 GN=LOC111021178 PE=3 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 2.4e-139
Identity = 254/336 (75.60%), Postives = 287/336 (85.42%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M ELSWRHHTLIQ+LL+RGPLREDQFHL+F RITGK+PDNDQQ+FN+YLL INKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF+KAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQAFDLLNVTIVGKVEKRTDKRSSPLYLYQWPQSQVIPAAFKNFSKSHKEK 180
           I+AL+LQLENQ  D+ +                         SQVIP AFKNFS S KEK
Sbjct: 121 IAALHLQLENQLGDMGS-----------------------QSSQVIPPAFKNFSISLKEK 180

Query: 181 TIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCT 240
           TIAELAQD+WL+CTP+GFVNLGVRSFLDLRSWFR+ND+PSCEVCNEAGVKAELC +E CT
Sbjct: 181 TIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCT 240

Query: 241 VRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKS 300
           VRVH+YCLKKMLSNKKSKRACPGCGT+W+ST++N+ESKEE DEPD RTQ Q SS +RKKS
Sbjct: 241 VRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKS 300

Query: 301 KLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR 337
           +LN+D+D   ++ + A ASQPPP+TRR TR+S RQR
Sbjct: 301 RLNIDMD---SDSNGASASQPPPETRRVTRSSARQR 310

[Close]

BLAST of Cmc05g0121971 vs. TAIR 10
Match: AT5G21140.1 (embryo defective 1379 )

HSP 1 Score: 325.1 bits (832), Expect = 6.7e-89
Identity = 179/340 (52.65%), Postives = 227/340 (66.76%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M  LSW+HHTLIQ+L+SRGPL+E +FH +F  +TG+ P   +++F+ YLL INK LS+  
Sbjct: 1   MASLSWKHHTLIQALISRGPLKEKEFHSIFTAVTGRNPVTVKKIFDKYLLEINKELSYVH 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FEL+ CR+QYDG+V YG+VNNV+DDQSKLGTKYSVPQIAFFK I+EAIAQD +AQG IS+
Sbjct: 61  FELKACRDQYDGQVCYGVVNNVADDQSKLGTKYSVPQIAFFKGIIEAIAQDEAAQGCISS 120

Query: 121 ISALNLQLENQAFDLLNVTIVGKVEKRTDKRSSPLYLYQWPQSQVIPAAFKNFSKSHKEK 180
             ALN++LENQ                + + SS          Q +P AFKNFS + KEK
Sbjct: 121 FDALNIRLENQI---------------SSEASS--------SQQQVPPAFKNFSMTQKEK 180

Query: 181 TIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCT 240
           T+ EL +DKWL  T E  + LG+RS LDLRSWFR+NDVPSCEVCNEAGVKA+LC +E C 
Sbjct: 181 TLDELVRDKWLCRTRERNIGLGIRSLLDLRSWFRNNDVPSCEVCNEAGVKADLCPTEGCP 240

Query: 241 VRVHRYCLKKMLSNKKSKRACPGCGTRWQ-STMSNIESKEEV--DEPDTRTQDQPSSHKR 300
           VR+H+YCLKK+LS +  KR C GCG  W  S ++  E+ EE   DE ++ TQ      KR
Sbjct: 241 VRIHKYCLKKLLSQRDDKR-CSGCGKPWPLSKITKTEAAEEAMNDEEESETQATAPKAKR 300

Query: 301 KKSKLNVDIDLGPNEDSTAE-ASQPPPDTRRATRNSTRQR 337
           ++ +     D   N  S A  AS    +TRR TR+    R
Sbjct: 301 RRQQR----DSTENGSSQASLASTSGANTRRVTRSVGHSR 312

The following BLAST results are available for this feature:

BLAST of Cmc05g0121971 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740711.1	5.9e-172	91.20	non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus] >X...	[more]
KAE8649414.1	5.9e-172	91.20	hypothetical protein Csa_021680 [Cucumis sativus]	[more]
XP_008449859.1	2.7e-169	91.67	PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis ...	[more]
XP_038900599.1	2.3e-147	81.25	non-structural maintenance of chromosomes element 1 homolog isoform X2 [Benincas...	[more]
XP_038900598.1	2.3e-147	81.25	non-structural maintenance of chromosomes element 1 homolog isoform X1 [Benincas...	[more]

BLAST of Cmc05g0121971 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6PAF4	5.1e-09	23.61	Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX...	[more]
Q6P881	1.8e-06	20.79	Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicali...	[more]

BLAST of Cmc05g0121971 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BMD8	1.3e-169	91.67	Non-structural maintenance of chromosomes element 1 homolog OS=Cucumis melo OX=3...	[more]
A0A0A0KZ19	3.6e-159	86.90	Non-structural maintenance of chromosomes element 1 homolog OS=Cucumis sativus O...	[more]
A0A6J1JYV1	1.9e-139	76.33	Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima ...	[more]
A0A6J1K5P2	1.9e-139	76.33	Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima ...	[more]
A0A6J1DI86	2.4e-139	75.60	Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charant...	[more]

BLAST of Cmc05g0121971 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21140.1	6.7e-89	52.65	embryo defective 1379	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 219..279 e-value: 1.2E-10 score: 42.7
IPR014857	Zinc finger, RING-like	PFAM	PF08746	zf-RING-like	coord: 221..264 e-value: 6.9E-8 score: 32.7
IPR014857	Zinc finger, RING-like	CDD	cd16493	RING-CH-C4HC3_NSE1	coord: 220..266 e-value: 2.36891E-13 score: 61.6769
None	No IPR available	GENE3D	3.90.1150.220		coord: 5..81 e-value: 6.3E-14 score: 53.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 313..336
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 276..306
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..336
None	No IPR available	PANTHER	PTHR20973:SF1	BNAANNG27900D PROTEIN	coord: 1..331
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 84..217 e-value: 8.9E-19 score: 69.5
IPR011513	Non-structural maintenance of chromosomes element 1	PFAM	PF07574	SMC_Nse1	coord: 8..209 e-value: 4.6E-43 score: 147.4
IPR011513	Non-structural maintenance of chromosomes element 1	PANTHER	PTHR20973	NON-SMC ELEMENT 1-RELATED	coord: 1..331

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0121971.1	Cmc05g0121971.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006301	postreplication repair
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030915	Smc5-Smc6 complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity