Cmc04g0121401 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0121401
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBnaA03g55300D protein
LocationCMiso1.1chr04: 36431684 .. 36439474 (+)
RNA-Seq ExpressionCmc04g0121401
SyntenyCmc04g0121401
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTAGTTGTGTTTATACTTAATTATAACAAATGCAAATGACTACTTCTTGACAACGCTTGAACACATCATCAATCAACCAATCTCATCTTCTTCTCTGCATGGGTTCTTATCAATCTACCTCAGCAGCCATAAACTAATATCACGGAATTTGGAGCTCTTCAAAATCCCACTTTCTCAACACTTTCTTCCCAAACCTGGTCTAATGTTGGATGTGTTTCGAAGCTGGAGGAAAATTTTGCTTCAGCTCCGACCAACTGAAAGCTTACCTATCGGAGAATGAAATTCGCTGGAGAATTATCCTGTTTCAGTTCAGAAAGAAGTGGAATTCATTGGCGTAACTGGTAATTGTAGGTCTTCTGACTCTAAGAAGGAGAACCAATTAAGAAATCGTGAAACTTGTGATGGGGTACCTGACAACAAGAAGTGCCGGGACCAGAAGAAGTTGGTTGCTTGTGTCCAAAGTAATCTGATTGGTAAACACCAAGTTTCTTTTGATTTTTACCATCCTTTTCCGTTTTCTTCCGACGTGGATTTTGGTTCCAGTTTCTGCTACTGGATTTAATATTCCTTGAATCCCCCCAACTCCAGATTATTATTGAAAGTTATACTGGGAACGAGGCAGTTATTTGATAGCAAAGGTCCATCCTCTATATTTTGGAATTGAGTTGACATATAATATCCGATGTGAAGCTTCAAATAGTTAACATGTGCTAGGAGCATGCCAGTAATGATTTTTCCTTTCTTAATTCAATAACATCACATCATAATCTTAACGATTTTTAAGTTTTGGTCTACAGAATCATTTGATCGAATTTCACTATACACAAAGGTTTATTATACGGTATCTGGTAGCTTAATTATTTGTTTTCCTGAGTAAATTTCCAACGAGTATTTAAACATAGGAAAGGTCTTAGATCTCACTTTTCCTTGCCATGACAAGGGAGCAAGTTTTTGTTAGTTTACCATTGAGGAAGTAAGAAAAGGCAGGAAAAAATGAGTACAGATTCTTCTCTTAAAAGTGCTTTCTCAATAAAAAGTTGTTTTGTCTCCTTCCTTTTGTGCTAATTTCTTCAACAGAGGATGTGGGAGACACAAATAATGTAAACCCTAGAATCCAAGAATCCCGAAGTCATCTGAGAAACTCAAGAGGAGTTTAGGGATTGATGTTAGTTGGAGAAAAATGGATTAAGATTGATGCTTTAAGAAAGATCGGAAAAGAATTTTATTAAGATTTGATGGTTAAGATCAAGTGTTATGGAAGATGTGTCATAGTTTTTAAGAAAAGTGTCATTCAAGCTAAGGAATGTTTGGAAATTGGCTAGGGGCTGTTTGCCCCTAGGATTAGAGAGCAGTGGCTCCATGTTTGGCCCTAGTATTGTCAGATCCTAGTATTATGATAATACTTGTTCTCACTTCCCTTCCTCCTCTTCCTCACACTCCCTCTCTCACTAAGCTCAAAATACCTACCAAGTAAAAGTATAAGGCCAAGCCAAAGTGGAAATCCCAATAGCAGCCACTACAAAAAGAAGCAATGCCGACAAAAGAGGAGATAATAATCTACACCCTAAACTATAATCCTTAAACTATTATAATCTTCGGACTATTATAAGTCATTCTTCACCTCAAATGCCCCCTAAGTGTTTAACATACTCATAGGCTACCAAGAAAGTCATAAGAACCTCCAAAGACATAAGTTGAGCGGCCAAGAAAGATTATTTTGGTATGGTCGAGAGGTGTCAAGATAACCTCTATAGGACAAGACTAGGCGGCCAAGGGCATGCTAGGTGAGCAAGACATTTTGGCTAAAAGATTAGCTAGGCGAGGAAGAAGTGCTAACTAGGCGTTTCGGAAGTGTAAAAAAACCTCTAAAGGGGTTAGCATGTGGTCCTAGCTATGCGGCCAAAAGGTTATGCAGCCAAAAGGGCCATGCGGCCAAAGGGGTGTCATGCAGCCAAGGACATGTCACCAAATGCTAATCTTGGAACAGCATGTTTTGTTAAAGGTATCATGCTATGATGGAGAGGTTAGGGGAGCAAGAGGAAGTCCTAGGTGCTCTAGGCAGCAAGAATTTACTAAAGAACCCTTATGAAAAAAGGGGTAGGCGGCCAAAGGATGGCCTAAGCAATATGAGCTAAGAGATGAGATGGAAAACAAGTGGACAACATGCAAGATACCTAAGTTTTTCCAAGTAGGAGGTGTAAGGTAAGCAGCATGAGGTGGGAAGTGCGGTATGGGGGATAAGAGGTGTCAATCAAGGAGAATGCAAGGATCACTATATAAAGAAAATTTTGGATGAATGGTATTCACAAACCACTCGTGCCAATTGGGTAATTCCACTTAGAAAATCTCCTAATTAAGTCTAGTATTAAGGGAAGGGCTTCCAAGAAGAAAAGACACCGAGAAGGAAGGCATTGAAGTGAAGGAAGACTCAAAGGTCATTTTTTAAGGAAAATTGGGAAGTGCTGAGTATTTTGGAGCTACATAACTCAATACTTGGAATTTTTTGCTGAAATCTTGATTTGAGTTATAGATTTTAAGTTATTAAGCTCCAAAGTCAAGTTAAGTTTGTGGTCGAAAATCAAATTTCTGGGCAAGGCTAAGGGTGGGCCGAGTGCCAAGATGACAGGGAAAGATGGTCATGCAAATTAGGCATTAGAAGTTATTTAGGCCTTAGCTCATGCAAGGAGCATGTCCACCGCATGGCCAGGCGGCATGAGGCGCGTGCCTAGGCCATTCAAGGTGTCATGCGCACATAGACAAGGAAGTCAAGCGCAACTGAGGACACAGAAAGCACACGGCATGCATGAGGCACGCATCGCATGCGCGAAGCATGCATCATGCCATGGTTGCGAGGTTGGCATGAGGGCAAGCCTCTAGGCCTTCGCACGTGCGTTCAACTTGCCACCCATGCCCTGTACACCAGCCAATCCACATGACAGTTTTGGACATGTTTTGATGTTTTGGCAATTTTTGCTTGGAGTTTTGGTATCTTTTGATTATTAGGGATGAAATGGAGTATAAATAGCCTATTTTGAAGAAAAGTGAAGTTTGGTGAATTTTTCCAAGATAAGGAGAAAAGCTTCAAGTTTGTGAGTGAAACTTGTTTTAAAAGATGTTCATCAAATATGATTTCAAGTTCCACAGGCAATAGCTTGTGAATCACTTGCATTAAATGATTTCTGAGGATATTTCTAAGCTTGATTTATTATGTATAATTTCAAGAGCCCAATGCAGAAAAATGCATGTTGGGCCTTTGAAACAGTTCTAATCCTTTTGATAATAAGCTTGATTTACCAAGTTTTTTTCTCTCCTCGCTCACCTCTCTCTCTATATGTGTATGTGTATGTATGTGTATATATTAGGCACTGTGAAGGATGAAAAGTATAATTAAAATGACTGCAGTGATACTGTTAAAAGTGTGTGATGTCAGATGTGATGCTTAACATGAAAAAAGAGTATTGTTGGTTGATAACTAGTCATGCACCTTTACGTTGGTAATTAGAGCAAGTTCTAATTTCTGATGAAAATGGTATTGTGTAATTCAAATCCTGTGGGTCGGCACTAGCCTTCTCTAAGTAGAGGAACATGGTAGTTTAATGAAAGAAATTAGTAGTTATTGAGAGCAATCATTAATATTTTTTAATAGCTCTTTTGTCAAGAAAAAGAAAGGCACCAAGCATTCACCCCTCTGGATTTTCTCCCTTCATTCCCACTGATCTAGGTAATTATGTTTTGAAATATCTATCACCAGAATAAAACTCTTGAAACCTTCTTGTTTTATCTAAATATTGTATCATCCCAATATTATGAGATGCCTTGTGCATAGTAAGATATTTACTTCCTATCTCTGGCCCAAATTCAATATTTGACTTGAATTTTATGTGGAACAACGAGAAAAGGGAAGTAAATTCCTGCAACTGTGTAGAATTTGATAAAAAAAGAGCACGTTTTCTCATAGTCAACCATGAAGTGGTAGCATAATAAAGTTTTATGCAGAATTTTATAGAAAGGAGCATGTTTGAGATAGAACGGAAATATCACATCCCCAATAGTCCGATTTTGAAAATCTAAAACCCTAATTATGGATTTTTCAACCAGGAAAAAGATGTAAATATAAGGTAATTATGAGTTTCTTAAACTGATAGGGTTGCTTAATTTCTGATATATCATATTGTCTAATATTAATAGTTAATGAGAATACCCTTAGCCCTTATGCTTGCATTTTTTTTCCTTGCTGAAAAGTCCAGAAATTGGGCTGTTCTAGTCCTGAACGAAGGAGAAGATACGTTAGAAGTGAATGCCACCAGAGGAAACTTTTGAGAGGGGCTTAAGATTTTAAAACTTCAACGAAAAGGGTAGGGGCTTGTCATTTCAACCTACTAATCTTTCCCACATGGCACTTGGAAGCCATGTGTGTCTTTGATTCACCTGTTTCTCTATTCTAACTATATTCTTTTTTTTAGATAAGAAACAATTTCATGATTGAATGAAATATCCAGAAAGTATTTTCTTTACCACAGATAATGTATTCAATTAGACTTCATGCATCAAATGCAGGCAGCTTCTAGAATTTTTGTTTTTCCACTTCTCAAACGAATGTTTGCACGTCTTACAGTTCAAAACAGATTCCTTACTTCTAAGATAGTTTAGTTATGTATCAAATTTTTGTCATGATAATTTTTTGTGGTCGAGTGGTTGAATTCGTTAATTTTATTGTGCACGTGTCCTGTGAAAATATTAAAACAAGTTCCAACTATTTTCAATTTATTACAGTTCTTTGAAGATCTTACTCTTTGTTTGTTTGACGAGCTTGACTCTGCCAGGATCTTTGAAGTCCTTATTCTAGTTCGTCTGTTACAAACTTATAAGTAACTCACCGTTGCATCCTACCATTTGAGTATCTGGAATGTTTTGGAGTCATTAGTAATCCGCTGTGCCTGAACACTAAGAAATAGAAATTAGAGTTTTCTACTCTCTTATTTTTCACTTTTCAGATCACCATTCCTCAGACGACTGATAATAAGCAGGAAGCTGATATTAGATGATGGAAATGGAGAGTGCGTGCTTTACACAAGACCTCTTGTATCTGGAGAAAACTTTTTCTGCGTCTACCCTCATTAGACCAGCTAGCAACACCAGTAACCGGTGCGTATTTCCTAATTATTACAGTCCTAATCTTTGAGGTTCTTGGGCTTGCTGCAAGTTTAGTAGGATGCAAGCAGGTGGTATCCCATATCAAGAGCTTGAAATGGCAGTGCCAGAATCTTCCTCGGCTTGAAACGGCTGAAGGTTGGGATGATGATTGGGATGAATAAAAATTCTGTGAAATCACCAGGGAGGCCTCATATTGGGAACATTTCAGCTAATGGCCTTACTGCTAGGTCCAACAAAGATGGGCGAGAGAATGATTGGGATGTTTAGTTAATGAAACAGGGTGATAAGAAAACAAACTTCTGGTCTATCGACAAACTGGAAGGCAGGAAGAACAACAACGCGAATCATATAAAGTTGCCCTGAAGTTTCCCTAGTTGAGTGTAACTGTAAACCTTCTTCCTACATCTGATTAGGTTATAGAGTTTGTACTTGTAGCCGTCGCATATTGGGTCAGAAGCCATAAAGCTGTTTCATACCAAATTTTGGGTTTGTTTTGGTGCGATGTAGCATGCATCATAGCTTTTTGTGTCTTTTTTGAATTTTTACTTCTTTAGATAGCAGTTCCAATTTTTTCTTTATGATAGCTTTACATCAAATAAATGTTCATGCGAGCTTTCAAATTATGATTGGGTTTGCCATTGCAAAACTTTGGTAAGAGAACCATAAATGATACAGTACACATGCTCATGTGCGTGCGTCCGTATCTTTTTGGGAATGGGGAACAGTTTCTCTCTCTATGGTTACTGTGTAATAATTTTGAATACACTTCTGAATTATATTTTTTCTATTGATTACTGGTAAGCATTACCTCTAATGTATTGTCACGCCTGAATTTTATTTTTACCTCCGCGTGCTTCTTTTTCTTTTTATGCATGTCGGGAGTAATTGTGAAACTGCTTTGTTGTCTCTTACTGAAGCAAAAGGGCAGAGAAGGCCGATTTAATAATTCTGTTTCCTACGTTATTCTGTCTTTTAAAGTTTTGATTTTTTTTTTTTTTTTGTTTCTTAATTTTTGTTTCCAAATAAACAATGGGTTTTACTTGAACTGCTTACAGGATTCTTTCCTATATATACACTTTTTATTATTATGGATATGTTATGTATTGCTACCGCTTCTTCTCCATTCGTTCACTTATGGATGATTCCTTTTATGTTACTGCTTCTGCTCTTGGCAATTACGCATTTGGATTGATTATTACGATACATAATAACTTCTAACATGATTTTGAACAGTTAGTTTCTTTAACTTAAATCTTTGATTGCCCCTGCATTAAGGAATCAAGATAAAGATAAAGGAAGAGGAATAACGATGGGTCCCCACATGAAATGACATCATATGGAGAAGAAAAAAGGTGTTGCTATTTTAAAGGGTTGAAAGTGCCAAGGAGGACCCGCATGTGAATGGGGGTATTGATTATATTGAAGGCATTTTGAATTGGGTTCACTGTTCACTAGGTATGTCAGGTCTGCTATCATGTAATTATCTAAAACTTGACGTCTAAGTCTTAATTATGAAACATGGCTCCCAGGGCGGGGGGCTTACATTCATTGTGAGATGTGGGAAGCTGCAATGGGAAGCTTTCCCATGAAATAGTGAGAATGAGTTGGGCATATCATTACCATCGCAATAATAGGAGTGCTAAAGATAGCAACCCATGCCCATCTCAATCAAGTGTAAATAAATAAAGCAGAAGTATAGTTTTGTTTGTTTTTACTGTAGAATCATTTATGTTAAAAGCAAAGGTATCAATCCTTTTTAACACATTTCTCATGTTTTGGCAGATTTGGAAATGGTGCAAACTGCTGAGTACTAGACAGATTTTCCATTGGGCACCTATCTGCATGCTGCATCATTGACGTACATTCTAAATTCTATGGACAAAGAATATGGCATAGGAAACAAAAACATAACCAAGCAAAAGATAGTTTCACGCCATGTTTGAAGGGATATACTATATGGAATACTATGTAACTCTTCATGGTGAAATGAATATGGTGTGGTGGAACTTTAAGGAAATGAATAAAACTACAAGAAAAATTACAGTAAAATGTTGTAAATCAACTCGATTGAAGTTGAAAAAGCATTTGATTCTCCATGTAGTTCATCTTCTTTCTCTTTTTGTGAAAACAAATCGAGCAGATTAGCTTCACCCAAGGAATCGCAAGTATCCATTTTGCTCGTTAGTTTCATTCCAACTCCTCATCAACTTCAGAGGGAGATTGGATCAACTCTAATATATTGACAACCTCATTCATGTCTGGTCTGTTAGATGGTACTTGAGATGCGCATATTAAACCCAGTTTCATTACAGGAATCGCTTCTTCAACACGGAAGTTCAGTTGGAGCCTCTCATCAACACATCGTTCCACTGTCCCTTCATCCAGAGCTACCCTCACCATATCACAGAGAACTATAACATCATCTTCCATGTACTCAACGGGTCTTTTTCCTGTCACCACTTCCAGAACCAAGATGCCAAAACCATACACATCACACTTTTCGGTTATAGTCACTGTCTTGCAGGCAAACTCCGGAGCCATGTATCCTAAAGCGCTTTGGATTTTACTGCTTAAGATGCAACGGTCCAACATTGGCAATAACATTGCCAACCCATAGTCCCCTACTTTTGGTTTC

mRNA sequence

ATTTAGTTGTGTTTATACTTAATTATAACAAATGCAAATGACTACTTCTTGACAACGCTTGAACACATCATCAATCAACCAATCTCATCTTCTTCTCTGCATGGGTTCTTATCAATCTACCTCAGCAGCCATAAACTAATATCACGGAATTTGGAGCTCTTCAAAATCCCACTTTCTCAACACTTTCTTCCCAAACCTGGTCTAATGTTGGATGTGTTTCGAAGCTGGAGGAAAATTTTGCTTCAGCTCCGACCAACTGAAAGCTTACCTATCGGAGAATGAAATTCGCTGGAGAATTATCCTGTTTCAGTTCAGAAAGAAGTGGAATTCATTGGCGTAACTGGTAATTGTAGGTCTTCTGACTCTAAGAAGGAGAACCAATTAAGAAATCGTGAAACTTGTGATGGGGTACCTGACAACAAGAAGTGCCGGGACCAGAAGAAGTTGGTTGCTTGTGTCCAAAGTAATCTGATTGATCACCATTCCTCAGACGACTGATAATAAGCAGGAAGCTGATATTAGATGATGGAAATGGAGAGTGCGTGCTTTACACAAGACCTCTTGTATCTGGAGAAAACTTTTTCTGCGTCTACCCTCATTAGACCAGCTAGCAACACCAGTAACCGGTGCGTATTTCCTAATTATTACAGTCCTAATCTTTGAGGTTCTTGGGCTTGCTGCAAGTTTAGTAGGATGCAAGCAGGTGGTATCCCATATCAAGAGCTTGAAATGGCAGTGCCAGAATCTTCCTCGGCTTGAAACGGCTGAAGGTTGGGATGATGATTGGGATGAATAAAAATTCTGTGAAATCACCAGGGAGGCCTCATATTGGGAACATTTCAGCTAATGGCCTTACTGCTAGGTCCAACAAAGATGGGCGAGAGAATGATTGGGATGTTTAGTTAATGAAACAGGGTGATAAGAAAACAAACTTCTGGTCTATCGACAAACTGGAAGGCAGGAAGAACAACAACGCGAATCATATAAAGTTGCCCTGAAGTTTCCCTAGTTGAGTGTAACTGTAAACCTTCTTCCTACATCTGATTAGGTTATAGAGTTTGTACTTGTAGCCGTCGCATATTGGGTCAGAAGCCATAAAGCTGTTTCATACCAAATTTTGGGTTTGTTTTGGTGCGATGTAGCATGCATCATAGCTTTTTGTGTCTTTTTTGAATTTTTACTTCTTTAGATAGCAGTTCCAATTTTTTCTTTATGATAGCTTTACATCAAATAAATGTTCATGCGAGCTTTCAAATTATGATTGGGTTTGCCATTGCAAAACTTTGGTAAGAGAACCATAAATGATACAGTACACATGCTCATGTGCGTGCGTCCGTATCTTTTTGGGAATGGGGAACAGTTTCTCTCTCTATGGTTACTGTGTAATAATTTTGAATACACTTCTGAATTATATTTTTTCTATTGATTACTGGTAAGCATTACCTCTAATGTATTGTCACGCCTGAATTTTATTTTTACCTCCGCGTGCTTCTTTTTCTTTTTATGCATGTCGGGAGTAATTGTGAAACTGCTTTGTTGTCTCTTACTGAAGCAAAAGGGCAGAGAAGGCCGATTTAATAATTCTGTTTCCTACGTTATTCTGTCTTTTAAAGTTTTGATTTTTTTTTTTTTTTTGTTTCTTAATTTTTGTTTCCAAATAAACAATGGGTTTTACTTGAACTGCTTACAGGATTCTTTCCTATATATACACTTTTTATTATTATGGATATGTTATGTATTGCTACCGCTTCTTCTCCATTCGTTCACTTATGGATGATTCCTTTTATGTTACTGCTTCTGCTCTTGGCAATTACGCATTTGGATTGATTATTACGATACATAATAACTTCTAACATGATTTTGAACAGTTAGTTTCTTTAACTTAAATCTTTGATTGCCCCTGCATTAAGGAATCAAGATAAAGATAAAGGAAGAGGAATAACGATGGGTCCCCACATGAAATGACATCATATGGAGAAGAAAAAAGGTGTTGCTATTTTAAAGGGTTGAAAGTGCCAAGGAGGACCCGCATGTGAATGGGGGTATTGATTATATTGAAGGCATTTTGAATTGGGTTCACTGTTCACTAGATTTGGAAATGGTGCAAACTGCTGAGTACTAGACAGATTTTCCATTGGGCACCTATCTGCATGCTGCATCATTGACGTACATTCTAAATTCTATGGACAAAGAATATGGCATAGGAAACAAAAACATAACCAAGCAAAAGATAGTTTCACGCCATGTTTGAAGGGATATACTATATGGAATACTATGTAACTCTTCATGGTGAAATGAATATGGTGTGGTGGAACTTTAAGGAAATGAATAAAACTACAAGAAAAATTACAGTAAAATGTTGTAAATCAACTCGATTGAAGTTGAAAAAGCATTTGATTCTCCATGTAGTTCATCTTCTTTCTCTTTTTGTGAAAACAAATCGAGCAGATTAGCTTCACCCAAGGAATCGCAAGTATCCATTTTGCTCGTTAGTTTCATTCCAACTCCTCATCAACTTCAGAGGGAGATTGGATCAACTCTAATATATTGACAACCTCATTCATGTCTGGTCTGTTAGATGGTACTTGAGATGCGCATATTAAACCCAGTTTCATTACAGGAATCGCTTCTTCAACACGGAAGTTCAGTTGGAGCCTCTCATCAACACATCGTTCCACTGTCCCTTCATCCAGAGCTACCCTCACCATATCACAGAGAACTATAACATCATCTTCCATGTACTCAACGGGTCTTTTTCCTGTCACCACTTCCAGAACCAAGATGCCAAAACCATACACATCACACTTTTCGGTTATAGTCACTGTCTTGCAGGCAAACTCCGGAGCCATGTATCCTAAAGCGCTTTGGATTTTACTGCTTAAGATGCAACGGTCCAACATTGGCAATAACATTGCCAACCCATAGTCCCCTACTTTTGGTTTC

Coding sequence (CDS)

ATGTACTCAACGGGTCTTTTTCCTGTCACCACTTCCAGAACCAAGATGCCAAAACCATACACATCACACTTTTCGGTTATAGTCACTGTCTTGCAGGCAAACTCCGGAGCCATGTATCCTAAAGCGCTTTGGATTTTACTGCTTAAGATGCAACGGTCCAACATTGGCAATAACATTGCCAACCCATAG

Protein sequence

MYSTGLFPVTTSRTKMPKPYTSHFSVIVTVLQANSGAMYPKALWILLLKMQRSNIGNNIANP
Homology
[Close]
BLAST of Cmc04g0121401 vs. NCBI nr
Match: CDY67471.1 (BnaA03g55300D [Brassica napus])

HSP 1 Score: 60.5 bits (145), Expect = 6.1e-06
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0 

Query: 2   YSTGLFPVTTSRTKMPKPYTSHFSVIVTVLQANSGAMYPKALWILLLKMQR 53
           YSTGLFP+TTS TK+P PYTSHFSVI+TV  AN  A+  + LW L+  + R
Sbjct: 60  YSTGLFPITTSSTKIPNPYTSHFSVILTVRHANFRAV--QRLWSLIFGVPR 108

[Close]
BLAST of Cmc04g0121401 vs. NCBI nr
Match: VDC71120.1 (unnamed protein product, partial [Brassica rapa])

HSP 1 Score: 58.2 bits (139), Expect = 3.0e-05
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 2  YSTGLFPVTTSRTKMPKPYTSHFSVIVTVLQANSGAM 39
          YSTGLFPVTTS TK+P PYTSHFSVI+TV  AN  A+
Sbjct: 60 YSTGLFPVTTSSTKIPNPYTSHFSVILTVRHANFRAV 96

[Close]
BLAST of Cmc04g0121401 vs. NCBI nr
Match: VDC58443.1 (unnamed protein product, partial [Brassica rapa])

HSP 1 Score: 58.2 bits (139), Expect = 3.0e-05
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 2  YSTGLFPVTTSRTKMPKPYTSHFSVIVTVLQANSGAM 39
          YSTGLFPVTTS TK+P PYTSHFSVI+TV  AN  A+
Sbjct: 59 YSTGLFPVTTSSTKIPNPYTSHFSVILTVRHANFRAV 95

[Close]
BLAST of Cmc04g0121401 vs. NCBI nr
Match: VDC69426.1 (unnamed protein product, partial [Brassica rapa])

HSP 1 Score: 54.3 bits (129), Expect = 4.3e-04
Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0 

Query: 2  YSTGLFPVTTSRTKMPKPYTSHFSVIVTV 31
          YSTGLFPVTTS TK+P PYTSHFSVI+TV
Sbjct: 60 YSTGLFPVTTSSTKIPNPYTSHFSVILTV 88

[Close]
BLAST of Cmc04g0121401 vs. ExPASy TrEMBL
Match: A0A078JP12 (BnaA03g55300D protein OS=Brassica napus OX=3708 GN=BnaA03g55300D PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.9e-06
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0 

Query: 2   YSTGLFPVTTSRTKMPKPYTSHFSVIVTVLQANSGAMYPKALWILLLKMQR 53
           YSTGLFP+TTS TK+P PYTSHFSVI+TV  AN  A+  + LW L+  + R
Sbjct: 60  YSTGLFPITTSSTKIPNPYTSHFSVILTVRHANFRAV--QRLWSLIFGVPR 108

[Close]
BLAST of Cmc04g0121401 vs. ExPASy TrEMBL
Match: A0A0A9R115 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-05
Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 0 

Query: 1   MYSTGLFPVTTSRTKMPKPYTSHFSVIVTVLQANSGAM 39
           MYSTG+ PV  SR +MP PYTSHFSVI TV  ANSGAM
Sbjct: 65  MYSTGVLPVRISRIRMPNPYTSHFSVIFTVRHANSGAM 102

[Close]
BLAST of Cmc04g0121401 vs. ExPASy TrEMBL
Match: A0A0A9IHC8 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-05
Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 0 

Query: 1   MYSTGLFPVTTSRTKMPKPYTSHFSVIVTVLQANSGAM 39
           MYSTG+ PV  SR + P PYTSHFSVI TVL ANSGAM
Sbjct: 65  MYSTGVLPVRISRIRTPNPYTSHFSVIFTVLHANSGAM 102

[Close]
BLAST of Cmc04g0121401 vs. ExPASy TrEMBL
Match: A0A0A9R2F1 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-05
Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 0 

Query: 1  MYSTGLFPVTTSRTKMPKPYTSHFSVIVTVLQANSGAM 39
          MYSTG+ PV  SR + P PYTSHFSVI TVL ANSGAM
Sbjct: 1  MYSTGVLPVRISRIRTPNPYTSHFSVIFTVLHANSGAM 38

[Close]
BLAST of Cmc04g0121401 vs. ExPASy TrEMBL
Match: A0A3P5ZE36 (Uncharacterized protein (Fragment) OS=Brassica campestris OX=3711 GN=BRAA05T20834Z PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-05
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 2  YSTGLFPVTTSRTKMPKPYTSHFSVIVTVLQANSGAM 39
          YSTGLFPVTTS TK+P PYTSHFSVI+TV  AN  A+
Sbjct: 60 YSTGLFPVTTSSTKIPNPYTSHFSVILTVRHANFRAV 96

The following BLAST results are available for this feature:
BLAST of Cmc04g0121401 vs. NCBI nr
Match NameE-valueIdentityDescription
CDY67471.16.1e-0660.78BnaA03g55300D [Brassica napus][more]
VDC71120.13.0e-0575.68unnamed protein product, partial [Brassica rapa][more]
VDC58443.13.0e-0575.68unnamed protein product, partial [Brassica rapa][more]
VDC69426.14.3e-0486.21unnamed protein product, partial [Brassica rapa][more]
BLAST of Cmc04g0121401 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc04g0121401 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A078JP122.9e-0660.78BnaA03g55300D protein OS=Brassica napus OX=3708 GN=BnaA03g55300D PE=4 SV=1[more]
A0A0A9R1151.1e-0573.68Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A0A9IHC81.1e-0573.68Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A0A9R2F11.1e-0573.68Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A3P5ZE361.5e-0575.68Uncharacterized protein (Fragment) OS=Brassica campestris OX=3711 GN=BRAA05T2083... [more]
BLAST of Cmc04g0121401 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0121401.1Cmc04g0121401.1mRNA