Cmc04g0120871 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0120871
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPhosphoglycerate kinase
LocationCMiso1.1chr04: 36212150 .. 36214993 (+)
RNA-Seq ExpressionCmc04g0120871
SyntenyCmc04g0120871
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTTGAATTGATTTATAGGTGTTTAAAAAATAAAAACATGTGTGTAGTTTTATTATATTTACACTGAAAACAAAGAGGCCTAAGTCTAAAAATGGAATGGAATTTTAAAAAAATGGTTAACGTACTATCGACCAGCATCTATGGAAGTAGAAGAAATATCGCCGATGGAGGACGAGGAACGGTAAGACGTTGCTGAAATAACTTCGGTCATTCTTGAGTTAAATTTTGAGTAATTTTGAGAACAATCCCACCCCTCCACCGCCGAAATTTTATCATCGCCGTCAAGGATTCTCATCACTCGTCTCATCGTTGGCCGAGCTTCAGCTATCTGGTGACTACAATGAAGCCCTAATACCAGAACCATCTCCATCTCCTCTGCCTCATATTCCCAATTCAACTTCGGATCAGCCGCATCAAGAATTTTTCCCTTTTCATACTGCTCCATCACCCAATCCACCAGTATGAACTCCTCCGACTTCAGAGGTTTTCTTCCACACGCCACTTCCAGAAGCAGAACTCCGTACCCAAACACATCCGTGCTTTTTGACGCCTTCCCTGTACGTACCAACTCCGGCGCTATGTACCCAATCGTACCCACGACGCCTGTCGTGTGCGATGCTTCGTCGTGGTCGTATTGCCTGGCTAGACCGAAATCGCTCAATCGAGGATTCATGTCCGCGTCTATTAGAACATTGCTTGGTTTCACATCTCGGTGGATTACTACTTGCTCCCACTCTTCGTGAAGGTATAATAATCCTGCTGCAATTCCTTTGAGGATGTTGAATCTTTGTTTCCAATTCAATATAATGTTGTTTTTTGGATGATATAGAAGTGAATAGAGGCTTCCATTTGGTATATAATCGTAAACTATGAGTAGATCGTTCTTTTTCTTGCACCATCCTTGGAGATTGACCAAGTTCTTGTGTCTTAATCGTCCTAAGCTTTCGATTTCTGCTGCGAATTCTTTCATTCCTTGGCCAGAATTTCTTCTTACTCTCTTCACTGCAATTTCAATTCCTGTTGAACGTATCTGACCTTTATACACTGAGCCAAAACCCCCAATTCCAATTAGTTCGCTACTTTTAAATCCTTTTGTTGCTTTGTACAGATCTGTGTAGTGGAATCTGTGAGGACAGTCTCTTTCCCAATCCTCAAGCCTCTCAGTGTGCCAGGTTTTTCTGTACCAGAAAGCTAAGAAAAGAATCCCTAAAATGGCTACAACAGAAATGACTGCTACAAAAACCTTAACGTGGGACTTGGGTGATGAAGAAGGAGAATCCTGCTCTTTTGGTGGGTTGGGAAGAAGAGAGTAATTCAGGAGAGGTGCTGGTCCATTCATTGCAAAACTCCATCCTAAAATGTAATGAGAGCTTGTTTTATCTCCGGTTGAAGCCGTGAAGCCGACGAACATTTGTTCCTTTAGAAAAGGTTTCAGGTCAATTGGATAAGAAAGGAGTGGCTTTGTTGGTTTTCTTTGGTGCTTCCATGGAGCTAGAGTGACGTTCACTATTCTCTTGGGGCCGTCGTATTCAACCCAAGCAATGATAGGATCACCAGAATCCATTTGCAAGTCGTGTTCATGAGCTTCGCCATAGTCTGAATAAGAAGCAGGTTTGGATGCAACTGATGAAATGTTATTGATGTCGATCCCAACATGGTTTCCCTTGGTGTTCCTTTCTTCACCATGCCCATTTACAGTGTCAAATTCAATAGCAAATATATGGTTTGAAGGGTTACCATTGTTGGAAGAGTTGAACAATCCAAGATAGTGCCCACTTTCTGCACCTGAAAATTTGGTTGATGGAGCTATGGCAAAGGCCAAGCCATAGCCGCCTTCGCCAGGGCTCGAAGGTTCAATTGCAAAAACAAAAATTGTGCTGAAGGACGAAACATTCGGAAACGAGTCAGAACTTTGTTCAAACATCGGGAATGAAGTCGGAAAGAATGCATGGCCAATAACATTTTGCGATGTATTGGTGAGCCTCAACGCACCGGATGGCTTCACAACAAAAGCCCCCTCACGATCAAGGCTTGTATCGTTGAATCCATGGTAGAGAAGAGAAGACTGCTCAGCATGAGCCGCCAAAAAGATGAACACAGAAAGAAGAGCCAGATGAGCTGCAATAGCCATGTGAGTTTGTGAAAAACACAAAGCTTCAAAGAAGGATTAAACATAGGGTCAGCTTTTGAACTCCATTCTTCTTACTTTAATATAAATAAGAGAGATGGAATTGGTCTAGTTTTATGGAGAAACCCAAATTCCTTGTTGACTTGGGAATCAAAGTTTGAGAGAGTCACTGAATTTGAAGAAGAGCAAAGTCATTGGGAACGAGATATTAAATTGTTCGGTGGAGAAAGTTTGAAATTTTAGAGGTTGAAGACGAACACAAATACATTTTCATGTGCAGATTGACAACAGACGGTATGTTTGATTTATCTTTCCAAATGTTTTAACTCAAAATGAAATTATTCTTGAAAAGTTTATACTGTCTTGGCAACCACTCAAATAGGTTTATTTCGAAAGACCCTCTAACGGAAAAACTTTAAATTTTCAACTTAGAGGAGAAAAGGTAAATGGATGGGACTCATTCAAGCCATTAAGGCAAGGGGCCGCAGTAGAGACAAAAAAGAAAGTTGCGTATTAATGAGTGGCTCTTCGACCATCAGACGATTCAGACCGTTACCATAAGCGCTCAGATTGCGTAGTGATTATATTCTCATCTAATCAATGATATTAATTAGTTAAATTATTTCTTAACTCCTGAATACTTATGCTTTCTTTAAAATACTACGTAAAGTCAAATATTATTCTGATGATGTATTTTGGTTTCATTCTCTGTCTC

mRNA sequence

TGTTTGAATTGATTTATAGGTGTTTAAAAAATAAAAACATGTGTGTAGTTTTATTATATTTACACTGAAAACAAAGAGGCCTAAGTCTAAAAATGGAATGGAATTTTAAAAAAATGGTTAACGTACTATCGACCAGCATCTATGGAAGTAGAAGAAATATCGCCGATGGAGGACGAGGAACGGTAAGACGTTGCTGAAATAACTTCGGTCATTCTTGAGTTAAATTTTGAGTAATTTTGAGAACAATCCCACCCCTCCACCGCCGAAATTTTATCATCGCCGTCAAGGATTCTCATCACTCGTCTCATCGTTGGCCGAGCTTCAGCTATCTGGTGACTACAATGAAGCCCTAATACCAGAACCATCTCCATCTCCTCTGCCTCATATTCCCAATTCAACTTCGGATCAGCCGCATCAAGAATTTTTCCCTTTTCATACTGCTCCATCACCCAATCCACCAGTATGAACTCCTCCGACTTCAGAGGTTTTCTTCCACACGCCACTTCCAGAAGCAGAACTCCGTACCCAAACACATCCGTGCTTTTTGACGCCTTCCCTGTACGTACCAACTCCGGCGCTATGTACCCAATCGTACCCACGACGCCTGTCGTGTGCGATGCTTCGTCGTGGTCGTATTGCCTGGCTAGACCGAAATCGCTCAATCGAGGATTCATGTCCGCGTCTATTAGAACATTGCTTGGTTTCACATCTCGGTGGATTACTACTTGCTCCCACTCTTCGTGAAGATCTGTGTAGTGGAATCTGTGAGGACAGTCTCTTTCCCAATCCTCAAGCCTCTCAGTGTGCCAGGTTTTTCTGTACCAGAAAGCTAAGAAAAGAATCCCTAAAATGGCTACAACAGAAATGACTGCTACAAAAACCTTAACGTGGGACTTGGGTGATGAAGAAGGAGAATCCTGCTCTTTTGGTGGGTTGGGAAGAAGAGAGTAATTCAGGAGAGGTGCTGGTCCATTCATTGCAAAACTCCATCCTAAAATGTAATGAGAGCTTGTTTTATCTCCGGTTGAAGCCGTGAAGCCGACGAACATTTGTTCCTTTAGAAAAGGTTTCAGGTCAATTGGATAAGAAAGGAGTGGCTTTGTTGGTTTTCTTTGGTGCTTCCATGGAGCTAGAGTGACGTTCACTATTCTCTTGGGGCCGTCGTATTCAACCCAAGCAATGATAGGATCACCAGAATCCATTTGCAAGTCGTGTTCATGAGCTTCGCCATAGTCTGAATAAGAAGCAGGTTTGGATGCAACTGATGAAATGTTATTGATGTCGATCCCAACATGGTTTCCCTTGGTGTTCCTTTCTTCACCATGCCCATTTACAGTGTCAAATTCAATAGCAAATATATGGTTTGAAGGGTTACCATTGTTGGAAGAGTTGAACAATCCAAGATAGTGCCCACTTTCTGCACCTGAAAATTTGGTTGATGGAGCTATGGCAAAGGCCAAGCCATAGCCGCCTTCGCCAGGGCTCGAAGGTTCAATTGCAAAAACAAAAATTGTGCTGAAGGACGAAACATTCGGAAACGAGTCAGAACTTTGTTCAAACATCGGGAATGAAGTCGGAAAGAATGCATGGCCAATAACATTTTGCGATGTATTGGTGAGCCTCAACGCACCGGATGGCTTCACAACAAAAGCCCCCTCACGATCAAGGCTTGTATCGTTGAATCCATGGTAGAGAAGAGAAGACTGCTCAGCATGAGCCGCCAAAAAGATGAACACAGAAAGAAGAGCCAGATGAGCTGCAATAGCCATGTGAGTTTGTGAAAAACACAAAGCTTCAAAGAAGGATTAAACATAGGGTCAGCTTTTGAACTCCATTCTTCTTACTTTAATATAAATAAGAGAGATGGAATTGGTCTAGTTTTATGGAGAAACCCAAATTCCTTGTTGACTTGGGAATCAAAGTTTGAGAGAGTCACTGAATTTGAAGAAGAGCAAAGTCATTGGGAACGAGATATTAAATTGTTCGGTGGAGAAAGTTTGAAATTTTAGAGGTTGAAGACGAACACAAATACATTTTCATGTGCAGATTGACAACAGACGGAGAAAAGGTAAATGGATGGGACTCATTCAAGCCATTAAGGCAAGGGGCCGCAGTAGAGACAAAAAAGAAAGTTGCGTATTAATGAGTGGCTCTTCGACCATCAGACGATTCAGACCGTTACCATAAGCGCTCAGATTGCGTAGTGATTATATTCTCATCTAATCAATGATATTAATTAGTTAAATTATTTCTTAACTCCTGAATACTTATGCTTTCTTTAAAATACTACGTAAAGTCAAATATTATTCTGATGATGTATTTTGGTTTCATTCTCTGTCTC

Coding sequence (CDS)

ATGAACTCCTCCGACTTCAGAGGTTTTCTTCCACACGCCACTTCCAGAAGCAGAACTCCGTACCCAAACACATCCGTGCTTTTTGACGCCTTCCCTGTACGTACCAACTCCGGCGCTATGTACCCAATCGTACCCACGACGCCTGTCGTGTGCGATGCTTCGTCGTGGTCGTATTGCCTGGCTAGACCGAAATCGCTCAATCGAGGATTCATGTCCGCGTCTATTAGAACATTGCTTGGTTTCACATCTCGGTGGATTACTACTTGCTCCCACTCTTCGTGA

Protein sequence

MNSSDFRGFLPHATSRSRTPYPNTSVLFDAFPVRTNSGAMYPIVPTTPVVCDASSWSYCLARPKSLNRGFMSASIRTLLGFTSRWITTCSHSS
Homology
BLAST of Cmc04g0120871 vs. NCBI nr
Match: CAB3498045.1 (unnamed protein product [Digitaria exilis])

HSP 1 Score: 97.4 bits (241), Expect = 6.7e-17
Identity = 52/86 (60.47%), Postives = 59/86 (68.60%), Query Frame = 0

Query: 8   GFLPHATSRSRTPYPNTSVLFDAFPVRTNSGAMYPIVPTTPVVCDASSWSYCLARPKSLN 67
           G  P  TSR + P  NTSV  DAFP   +SGA YP+VPTT VV  ++ WSY LARPKS +
Sbjct: 118 GLRPQTTSRMKAPKANTSVRGDAFPDLASSGARYPMVPTTWVVWGSAPWSYNLARPKSPS 177

Query: 68  RGFMSASIRTLLGFTSRWITTCSHSS 94
           R F+S S RTLL   SRWITTCS SS
Sbjct: 178 RPFISLSRRTLLALMSRWITTCSQSS 203

BLAST of Cmc04g0120871 vs. NCBI nr
Match: CAB3485225.1 (unnamed protein product [Digitaria exilis])

HSP 1 Score: 97.1 bits (240), Expect = 8.8e-17
Identity = 51/86 (59.30%), Postives = 58/86 (67.44%), Query Frame = 0

Query: 8   GFLPHATSRSRTPYPNTSVLFDAFPVRTNSGAMYPIVPTTPVVCDASSWSYCLARPKSLN 67
           GF PHATS  + P  NTS   +AFPV  +SGAMYP+VPTT VVC +  WSY  A PKS +
Sbjct: 107 GFRPHATSSMKAPKANTSDALEAFPVCPSSGAMYPMVPTTWVVCGSVPWSYSRASPKSPS 166

Query: 68  RGFMSASIRTLLGFTSRWITTCSHSS 94
           R F+S S  TLL  TSR  TTCS SS
Sbjct: 167 RAFISLSSSTLLALTSRCTTTCSQSS 192

BLAST of Cmc04g0120871 vs. NCBI nr
Match: TVU15103.1 (hypothetical protein EJB05_38605, partial [Eragrostis curvula])

HSP 1 Score: 90.1 bits (222), Expect = 1.1e-14
Identity = 46/77 (59.74%), Postives = 52/77 (67.53%), Query Frame = 0

Query: 8   GFLPHATSRSRTPYPNTSVLFDAFPVRTNSGAMYPIVPTTPVVCDASSWSYCLARPKSLN 67
           GF PHATS  + P  NTS   DAFPVR +SGAMYP+VPTT VVC +  WSY  ARPKS +
Sbjct: 89  GFRPHATSSMKAPNANTSDALDAFPVRPSSGAMYPMVPTTCVVCGSVPWSYSRARPKSPS 148

Query: 68  RGFMSASIRTLLGFTSR 85
           R  +S S  TLL   SR
Sbjct: 149 RALISLSSSTLLALMSR 165

BLAST of Cmc04g0120871 vs. NCBI nr
Match: CAB3497643.1 (unnamed protein product [Digitaria exilis])

HSP 1 Score: 88.2 bits (217), Expect = 4.1e-14
Identity = 52/92 (56.52%), Postives = 55/92 (59.78%), Query Frame = 0

Query: 2   NSSDFRGFLPHATSRSRTPYPNTSVLFDAFPVRTNSGAMYPIVPTTPVVCDASSWSYCLA 61
           +S  F G  P ATS  + P  NTSVL  AFPV   SGAMYP VP T VVC    WSY  A
Sbjct: 21  SSLRFIGLRPQATSSKKAPKANTSVLVVAFPVLLISGAMYPSVPMTCVVCGLLPWSYSRA 80

Query: 62  RPKSLNRGFMSASIRTLLGFTSRWITTCSHSS 94
           RPKSL+  FMSAS  TL    SR  TTCS  S
Sbjct: 81  RPKSLSFPFMSASRSTLADLMSRCTTTCSDPS 112

BLAST of Cmc04g0120871 vs. NCBI nr
Match: CAB3487744.1 (unnamed protein product [Digitaria exilis])

HSP 1 Score: 87.4 bits (215), Expect = 7.0e-14
Identity = 45/77 (58.44%), Postives = 52/77 (67.53%), Query Frame = 0

Query: 8   GFLPHATSRSRTPYPNTSVLFDAFPVRTNSGAMYPIVPTTPVVCDASSWSYCLARPKSLN 67
           GF PHATS  + P  NTS   +AFPV  +SGAMYP+VPTT VVC +  WSY  A PKS +
Sbjct: 89  GFRPHATSSMKAPKANTSDALEAFPVCPSSGAMYPMVPTTWVVCGSVPWSYSRASPKSPS 148

Query: 68  RGFMSASIRTLLGFTSR 85
           R F+S S  TLL  TSR
Sbjct: 149 RAFISLSSSTLLALTSR 165

BLAST of Cmc04g0120871 vs. ExPASy TrEMBL
Match: A0A453CFY2 (Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.2e-16
Identity = 51/86 (59.30%), Postives = 57/86 (66.28%), Query Frame = 0

Query: 8   GFLPHATSRSRTPYPNTSVLFDAFPVRTNSGAMYPIVPTTPVVCDASSWSYCLARPKSLN 67
           GF PHATS  + P  NTS   +AFPV  +SGA YP+VPTT VVC +  WSY  A PKS +
Sbjct: 93  GFRPHATSSMKAPSANTSDALEAFPVCPSSGARYPMVPTTCVVCGSVPWSYSRASPKSPS 152

Query: 68  RGFMSASIRTLLGFTSRWITTCSHSS 94
           R FMSAS  TLL   SR  TTCS SS
Sbjct: 153 RPFMSASSSTLLALMSRCTTTCSQSS 178

BLAST of Cmc04g0120871 vs. ExPASy TrEMBL
Match: A0A5J9TUM9 (Uncharacterized protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_38605 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.2e-15
Identity = 46/77 (59.74%), Postives = 52/77 (67.53%), Query Frame = 0

Query: 8   GFLPHATSRSRTPYPNTSVLFDAFPVRTNSGAMYPIVPTTPVVCDASSWSYCLARPKSLN 67
           GF PHATS  + P  NTS   DAFPVR +SGAMYP+VPTT VVC +  WSY  ARPKS +
Sbjct: 89  GFRPHATSSMKAPNANTSDALDAFPVRPSSGAMYPMVPTTCVVCGSVPWSYSRARPKSPS 148

Query: 68  RGFMSASIRTLLGFTSR 85
           R  +S S  TLL   SR
Sbjct: 149 RALISLSSSTLLALMSR 165

BLAST of Cmc04g0120871 vs. ExPASy TrEMBL
Match: T1LCI7 (Uncharacterized protein OS=Triticum urartu OX=4572 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.5e-14
Identity = 51/86 (59.30%), Postives = 56/86 (65.12%), Query Frame = 0

Query: 8   GFLPHATSRSRTPYPNTSVLFDAFPVRTNSGAMYPIVPTTPVVCDASSWSYCLARPKSLN 67
           G  P ATSR  TP  NTSV   AFPVR  SGA YP+VPTT VV +   WSY LARPKS +
Sbjct: 86  GLHPQATSRRNTPNANTSVKGVAFPVRIISGARYPMVPTTCVVLETVPWSYNLARPKSPS 145

Query: 68  RGFMSASIRTLLGFTSRWITTCSHSS 94
           R F+  S  TLL F SR +T  SHSS
Sbjct: 146 RPFICLSRSTLLAFISRCMTIFSHSS 171

BLAST of Cmc04g0120871 vs. ExPASy TrEMBL
Match: A0A3B6ASG0 (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 4.4e-14
Identity = 51/86 (59.30%), Postives = 55/86 (63.95%), Query Frame = 0

Query: 8   GFLPHATSRSRTPYPNTSVLFDAFPVRTNSGAMYPIVPTTPVVCDASSWSYCLARPKSLN 67
           G  P ATSR  TP  NTSV   AFPVR  SGA YP+VPTT VV     WSY LARPKS +
Sbjct: 80  GLHPQATSRRNTPNANTSVKGVAFPVRIISGARYPMVPTTCVVLATVPWSYNLARPKSPS 139

Query: 68  RGFMSASIRTLLGFTSRWITTCSHSS 94
           R F+  S  TLL F SR +T  SHSS
Sbjct: 140 RPFICLSRSTLLAFISRCMTIFSHSS 165

BLAST of Cmc04g0120871 vs. ExPASy TrEMBL
Match: A0A0A9U247 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.5e-14
Identity = 49/86 (56.98%), Postives = 54/86 (62.79%), Query Frame = 0

Query: 8  GFLPHATSRSRTPYPNTSVLFDAFPVRTNSGAMYPIVPTTPVVCDASSWSYCLARPKSLN 67
          G  P  TS +  P  NTS    AFPVR +SGA YP VPTT VV   +  S+ LA PKS +
Sbjct: 2  GRRPATTSNTSAPNANTSAAAVAFPVRVSSGARYPSVPTTRVVLGLAPRSWSLASPKSPS 61

Query: 68 RGFMSASIRTLLGFTSRWITTCSHSS 94
          R  MSAS  TLL FTSRW TTCSH S
Sbjct: 62 RADMSASRSTLLAFTSRWRTTCSHPS 87

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CAB3498045.16.7e-1760.47unnamed protein product [Digitaria exilis][more]
CAB3485225.18.8e-1759.30unnamed protein product [Digitaria exilis][more]
TVU15103.11.1e-1459.74hypothetical protein EJB05_38605, partial [Eragrostis curvula][more]
CAB3497643.14.1e-1456.52unnamed protein product [Digitaria exilis][more]
CAB3487744.17.0e-1458.44unnamed protein product [Digitaria exilis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A453CFY21.2e-1659.30Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata... [more]
A0A5J9TUM95.2e-1559.74Uncharacterized protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_38605... [more]
T1LCI71.5e-1459.30Uncharacterized protein OS=Triticum urartu OX=4572 PE=4 SV=1[more]
A0A3B6ASG04.4e-1459.30Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1[more]
A0A0A9U2477.5e-1456.98Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0120871.1Cmc04g0120871.1mRNA