Cmc04g0120301 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0120301
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr04: 35919266 .. 35922660 (-)
RNA-Seq Expression	Cmc04g0120301
Synteny	Cmc04g0120301

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGATATCTGCTCGTGATCACGGCACTTAGACAAAAAATCCTGAGCTTCAAAGGCAGAAACTCTATTATCTCCTGCTAAAGCATCATCTTACAGAGACGGGCACGCAAAAGAATGTCTAAAATATCGACTAAATTTTACATGCACATTTTCTATTCTCACAAGTACAGAACTTTCAGTAAGTACTTCCAGAGACTGAATTTGATCTGGACAAAGATGAAGAGTGGTTTAAGAACTCGATACAATCTTCAATGGCTTCAGCTCGATGCGAGTCCATGGAATCCGAGACCGATCTTGACCTTGTAAAAGTGGAGGCTGAAGAAACCTTTCGTGAAGATTTTCTTGTTGAGACAAAGCGAATTGCTTCACTTACTCTGGCCTTAAGGCTCTGTAGAAACCTCACCGGCAAGTACCTTGTTTCTCTGCTAAGGCCGAAGCTCCACATTCCGGCTCCGCCATCACCACCGTTGCCGTGTTTGAGCACAACCGTTGGCTTATCATTCACATCAGGACTGAAGCTGACTCGTTTGCTCGCTTTCCTTGACATTTGAACCTTCCAACTGAGATGTAAATCCTAAGGGTAAAATAGTGGCTTTAAAGAGAGAAGATAAAGAGATTTCGTGTAGTGTGTAAAAGATATGGGAAGGGATGTGTGAGAAGTAAATGGAGTAGATTTCTTGAGGAGAAGAGACAGTGTGTTAGGTTGTGAGAATAAGGAGCATTTATTGCTTCAAATTTAAGGAAATAGAGAGAAGAATGAAAGCGAAAGAATGGGGCTTAATTAAGTAACTCTCCGCTGTAGGAAGATTGAAGAAGATTGATTCAGTCGGGAGTAAGGCTCAAAGTGAGCGTTTAGATTACGCTCAAACAGACATGTCATTTATATATGGATTCCAAATGAGTGATGCACCAGGAACTTTTACCTACCCTTTAGAAAACGTTGGACCCCATGAAAAAACTTTGAAGAATATGCTTACAACTCCTCTTATTCTTGGTTTGCAATTGAAGGATTTAAGGAAAGATTAGGTTTTTTATATGTGCAAATTGCAACAGGAGGAGTTTTGGTTAAAAGATTAAGCAATGGGAAGTGGATTAGGTCAGAAAAAGAGATGAGTGGAGCCAACAGAGAATAAAAAGGAGAATGAGAAGAAGTAGAAGAGGGAGGAGGAATAAAAGGGGAGCAAGAGAGAGACAACCACTCGATACTCTTCAGCATCATCGTTGCTTTTGAGGCACAATGGAAGGGCCCTACAAGTTTCTCTTTTGTTGGCCATCTTGATTCTCATTTCCAGTAGTATCACAGAAATCCATCCGCCTGGTAATGCTCCTCTCTCTTTATTTCTCTCTCCTTCTTGCTTGAGCATAGATAAATTTTTTAGTACTTGAATCACTAAATGATAGGTTAGTTTATTCTACAGCCACCGACTTATTGAAAAAGTATCAATTTATATCATAAACTAACTATAAACTTTAAGTTAGTGATAACTAATAATTGTATCAATTCGGACTTTGAACTTTTGTAAGTATATCAATTTACACTCTCTATCGGTAAATATTGTTAATTTAGACTTTTGAGACAAAGACAAAATTGTCTTTGAAAACCATTCATGCATTTACTCCTAATCATTTATTTTGTAGAGAGTCCACGTTTAAAAAGTTTGTAAGTGTTTAAGAATTAATGCAGGGATAATTCTTAGATCTAATTGTAACAAAGAGTCTATATCAATAAACTTTGAAAATTTAGTAGTTTAATTATTTAAGTTATAAGTTTCACAGAATGAAAATAAAGAATGGTGTAGAAAATTTAAAGTTTGTTGAATGAATTGATATTTACCCGTAAATGCTAGTATTAGGCCAGTAATAAAGTAGGATAGGGAGTAGGATTGTTTCCTTTCCGTGAGGTCACAAGGTGTTTTTTATTTGAATGAGCAAAGGAAAGCAAATAAAACTTTTGTGCATTCACTTTTTCTTTTCTTCTTTTACTGTCGTTTGGCAGAAGAATTTTGTCTTGAAAAATCTGCATGCTCTCAGATCTTTTTTAGGGCTTTTGACTGAGAAATAAAGCTAAAGGAGGGGCCTGAAAATTGAATTCTTCATCTGCCTGTTGACTCCCTCTCCTATGTCTCTCTTCATCTGTTCAACACCTTTAATTATACCCTCCCTCTACGTCATTGTTTCTTTCCCTCTCTACTACTTTTTCTTAACCAATTCTTGTTCACAGCCATTGGATTGTTCATTCCACGCGCCAACATTTCCTCAATAGCTTTTTGCTATTGACAATCAAAGAAATCCTTTTCTTTTCTTTTTTCATTTTATCATTTCCTACTCTTTCATCCATAACTCATTTTTCATCATCTCTATTCACCTTTTTTAAATGTGGATTGCTGCAATTTCCCCTCTATTTTTTATTGGCAATTGTTGGATAGCGATATGGTTCCAATTTACTTACCTTGTGAAGGAATAACCACCCATGGAATAATCTCATATATATTAAAGCCTAAGTTGTAGGTAGTATATATTATGAATTTGATTTCTATAGTTTGATGAAACCTTCCTAAATATCTTTTAGGGTTTTTTTTTAATCAAATTATAAAAGATTGTTTACGAGGTTTTATTTCTATCATTAAGATGGAATTTTAACTTTTAAGCTCTTAAAGACCTTGGGAGTCAAAATGTTGTTTTACGAAATGTCATTTTTGTTTATGAACTTTTAATAAATACTTATAATAAATGTTAATGTGTTTGGCAACACTTTTTAAAACAATGTTTTATATATAAGTAAATTTTTGTTTGCTATACAAATTTTTGTTTGCTATACCTTACAAGTGTTTTTGTAAGTGACAAATTACTTGAACAGTATGAACTAATAATTTTAAAAAATGGTTTTTAGAATTGGTCATCAGTGGAAGATGGTTGCCAAAAGTTTCACGAGAGTAGGTTATCGATGATGGTTACTAGAGGTAATCAGCGGCAACATGGTGGAGGTGAAGTAGAAGATTGGTGAGTACATTTTGGTAATTTTAGGATTTATACGAGTTGGGAAGAAATTAATTGCTAAATACTCAAAGATCATTTTTCTTAAAATTGATTTCAAACCAACTTATTTTATAAACTCATTTTCTCCAAAGCTACCTTGAATAACTATAGACCCTTCAACTTTTTTTAAAATGATATATATATATATATATATGTAAAATATTGTTTTTAAAAATAAATACTTGAAAAGTTAAACAAATAAACCCTAAGGGTGTGTTTGGGGGAAGGAAAGAGTTATGGAGGAAAAGGATTATAATAATCCTAGGATTATGATAATCCTAGTGTTATGATAATATGTGTTTGGGGAATAGATTATTATTGGTAGTGTTATGGTAATATGTGTTTGGGAGAGAAAATATGA

mRNA sequence

CAGATATCTGCTCGTGATCACGGCACTTAGACAAAAAATCCTGAGCTTCAAAGGCAGAAACTCTATTATCTCCTGCTAAAGCATCATCTTACAGAGACGGGCACGCAAAAGAATGTCTAAAATATCGACTAAATTTTACATGCACATTTTCTATTCTCACAAGTACAGAACTTTCAGTAAGTACTTCCAGAGACTGAATTTGATCTGGACAAAGATGAAGAGTGGTTTAAGAACTCGATACAATCTTCAATGGCTTCAGCTCGATGCGAGTCCATGGAATCCGAGACCGATCTTGACCTTGTAAAAGTGGAGGCTGAAGAAACCTTTCGTGAAGATTTTCTTGTTGAGACAAAGCGAATTGCTTCACTTACTCTGGCCTTAAGGCTCTGTAGAAACCTCACCGGCAAGTACCTTGTTTCTCTGCTAAGGCCGAAGCTCCACATTCCGGCTCCGCCATCACCACCGTTGCCGTGTTTGAGCACAACCGTTGGCTTATCATTCACATCAGGACTGAAGCTGACTCGTTTGCTCGCTTTCCTTGACATTTGAACCTTCCAACTGAGATGTAAATCCTAAGGGTAAAATAGTGGCTTTAAAGAGAGAAGATAAAGAGATTTCGTGTAGTGTGTAAAAGATATGGGAAGGGATGTGTGAGAAGTAAATGGAGTAGATTTCTTGAGGAGAAGAGACAGTGTGTTAGGTTGTGAGAATAAGGAGCATTTATTGCTTCAAATTTAAGGAAATAGAGAGAAGAATGAAAGCGAAAGAATGGGGCTTAATTAAGTAACTCTCCGCTGTAGGAAGATTGAAGAAGATTGATTCAGTCGGGAGTAAGGCTCAAAGTGAGCGTTTAGATTACGCTCAAACAGACATGTCATTTATATATGGATTCCAAATGAGTGATGCACCAGGAACTTTTACCTACCCTTTAGAAAACGTTGGACCCCATGAAAAAACTTTGAAGAATATGCTTACAACTCCTCTTATTCTTGGTTTGCAATTGAAGGATTTAAGGAAAGATTAGGTTTTTTATATGTGCAAATTGCAACAGGAGGAGTTTTGGTTAAAAGATTAAGCAATGGGAAGTGGATTAGGTCAGAAAAAGAGATGAGTGGAGCCAACAGAGAATAAAAAGGAGAATGAGAAGAAGTAGAAGAGGGAGGAGGAATAAAAGGGGAGCAAGAGAGAGACAACCACTCGATACTCTTCAGCATCATCGTTGCTTTTGAGGCACAATGGAAGGGCCCTACAAGTTTCTCTTTTGTTGGCCATCTTGATTCTCATTTCCAGTAGTATCACAGAAATCCATCCGCCTGAATTGGTCATCAGTGGAAGATGGTTGCCAAAAGTTTCACGAGAGTAGGTTATCGATGATGGTTACTAGAGGTAATCAGCGGCAACATGGTGGAGGTGAAGTAGAAGATTGGTGAGTACATTTTGGTAATTTTAGGATTTATACGAGTTGGGAAGAAATTAATTGCTAAATACTCAAAGATCATTTTTCTTAAAATTGATTTCAAACCAACTTATTTTATAAACTCATTTTCTCCAAAGCTACCTTGAATAACTATAGACCCTTCAACTTTTTTTAAAATGATATATATATATATATATATGTAAAATATTGTTTTTAAAAATAAATACTTGAAAAGTTAAACAAATAAACCCTAAGGGTGTGTTTGGGGGAAGGAAAGAGTTATGGAGGAAAAGGATTATAATAATCCTAGGATTATGATAATCCTAGTGTTATGATAATATGTGTTTGGGGAATAGATTATTATTGGTAGTGTTATGGTAATATGTGTTTGGGAGAGAAAATATGA

Coding sequence (CDS)

ATGGCTTCAGCTCGATGCGAGTCCATGGAATCCGAGACCGATCTTGACCTTGTAAAAGTGGAGGCTGAAGAAACCTTTCGTGAAGATTTTCTTGTTGAGACAAAGCGAATTGCTTCACTTACTCTGGCCTTAAGGCTCTGTAGAAACCTCACCGGCAAGTACCTTGTTTCTCTGCTAAGGCCGAAGCTCCACATTCCGGCTCCGCCATCACCACCGTTGCCGTGTTTGAGCACAACCGTTGGCTTATCATTCACATCAGGACTGAAGCTGACTCGTTTGCTCGCTTTCCTTGACATTTGA

Protein sequence

MASARCESMESETDLDLVKVEAEETFREDFLVETKRIASLTLALRLCRNLTGKYLVSLLRPKLHIPAPPSPPLPCLSTTVGLSFTSGLKLTRLLAFLDI

Homology

[Close]

BLAST of Cmc04g0120301 vs. NCBI nr
Match: KAG7017238.1 (hypothetical protein SDJN02_19101, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 169.1 bits (427), Expect = 1.9e-38
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MASARCESMESETDLDLVK--VEAEETFREDFLVETKRIASLTLALRLCRNLTGKYLVSL 60
           MASARCESMESETDLDLVK  VEAEETFREDFLV+TKR+ASLTLALRLCRNLTGKYLVSL
Sbjct: 90  MASARCESMESETDLDLVKVEVEAEETFREDFLVDTKRMASLTLALRLCRNLTGKYLVSL 149

Query: 61  LRPKLHIPAPPSPPLPCLSTTVGLSFTSGLKLTRLLAFLDI 100
           LRPKLHIPAPPS P PCLS TVGLSFTSGLKLTRLLAFLDI
Sbjct: 150 LRPKLHIPAPPSRP-PCLSRTVGLSFTSGLKLTRLLAFLDI 189

[Close]

BLAST of Cmc04g0120301 vs. NCBI nr
Match: KAG6596356.1 (hypothetical protein SDJN03_09536, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 151.4 bits (381), Expect = 4.2e-33
Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 1   MASARCESMESETDLDLVKVEAEETFREDFLVETKRIASLTLALRLCRNLTGKYLVSLLR 60
           +ASARC+SMESETDLDLVKV AEETFREDFLV+TKR+ASLTLAL+LCRN TGK LVSL R
Sbjct: 5   IASARCDSMESETDLDLVKVAAEETFREDFLVDTKRMASLTLALKLCRNPTGKCLVSLFR 64

Query: 61  PKLHIPAPPSPPLPCLSTTVGLSFTSGLKLTRLLAFLDI 100
           PKL IPAP SPP PCLS TVGLSFTSGLKLTRLL FL I
Sbjct: 65  PKLKIPAPSSPP-PCLSMTVGLSFTSGLKLTRLLDFLVI 102

[Close]

BLAST of Cmc04g0120301 vs. NCBI nr
Match: KAG7027905.1 (Sulfoquinovosyl transferase SQD2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.4 bits (381), Expect = 4.2e-33
Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 1   MASARCESMESETDLDLVKVEAEETFREDFLVETKRIASLTLALRLCRNLTGKYLVSLLR 60
           +ASARC+SMESETDLDLVKV AEETFREDFLV+TKR+ASLTLAL+LCRN TGK LVSL R
Sbjct: 94  IASARCDSMESETDLDLVKVAAEETFREDFLVDTKRMASLTLALKLCRNPTGKCLVSLFR 153

Query: 61  PKLHIPAPPSPPLPCLSTTVGLSFTSGLKLTRLLAFLDI 100
           PKL IPAP SPP PCLS TVGLSFTSGLKLTRLL FL I
Sbjct: 154 PKLKIPAPSSPP-PCLSMTVGLSFTSGLKLTRLLDFLVI 191

[Close]

BLAST of Cmc04g0120301 vs. NCBI nr
Match: TKY65880.1 (hypothetical protein E2542_SST08742 [Spatholobus suberectus])

HSP 1 Score: 66.2 bits (160), Expect = 1.8e-07
Identity = 53/110 (48.18%), Postives = 60/110 (54.55%), Query Frame = 0


Query: 3   SARCESMESETDLDLVKVEAEETFREDFL-VETKRIASLTLALRLCRNLTGKYLVSLLRP 62
           SARCES+  + D DL KV+ EETF ED L  ET  I   T +     NLTG  LVS+   
Sbjct: 7   SARCESVRPDNDRDLTKVD-EETFLEDLLPTETFLIVLATFSPSRRSNLTGDKLVSIGNL 66

Query: 63  KLHI------------PAPPSPPLPCLSTTVGLSFTSGLKLTRLLAFLDI 100
           K+H+            P    PP PCL   VGLS TSGLK T LL FLDI
Sbjct: 67  KVHVLVILFLFLETLPPLSSLPPPPCLRKMVGLSLTSGLKHT-LLLFLDI 114

[Close]

BLAST of Cmc04g0120301 vs. NCBI nr
Match: KAF9680019.1 (hypothetical protein SADUNF_Sadunf06G0076600 [Salix dunnii])

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-06
Identity = 46/99 (46.46%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 7   ESMESETDLDLVKVEAEETFREDFLVETKRIASLTLALRLCRNLTGKYLVSLLRPKLHIP 66
           ES  S +DLDL K++      +  L++TKR A  T ALR   NL G+    L      +P
Sbjct: 8   ESTASASDLDLGKLDGVTAREDSLLMDTKRRALATFALRPLSNLAGENFEVLGSLNASVP 67

Query: 67  A------PPSPPLPCLSTTVGLSFTSGLKLTRLLAFLDI 100
           A      PP  PLP L   VGLS TSGLKLTRLLA  DI
Sbjct: 68  AIFFLFPPPLVPLPFLRKIVGLSLTSGLKLTRLLALRDI 106

The following BLAST results are available for this feature:

BLAST of Cmc04g0120301 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017238.1	1.9e-38	93.07	hypothetical protein SDJN02_19101, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6596356.1	4.2e-33	84.85	hypothetical protein SDJN03_09536, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7027905.1	4.2e-33	84.85	Sulfoquinovosyl transferase SQD2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
TKY65880.1	1.8e-07	48.18	hypothetical protein E2542_SST08742 [Spatholobus suberectus]	[more]
KAF9680019.1	1.1e-06	46.46	hypothetical protein SADUNF_Sadunf06G0076600 [Salix dunnii]	[more]

BLAST of Cmc04g0120301 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc04g0120301 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc04g0120301 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0120301.1	Cmc04g0120301.1	mRNA