Cmc04g0119581 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0119581
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr04: 35636140 .. 35638815 (+)
RNA-Seq Expression	Cmc04g0119581
Synteny	Cmc04g0119581

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATCAATAATTTCTTTTCTTAAATATACATCAAAGTAAGAATCTTACTACCCCAATGTTTGACTCCAAATTCCCATTTTTTCTTCTACTTCTGCCTTTTCTCCATCACTCTTTCTTAGCTACCAATTTTCCCGGAAACAGAGAACTAAGGAATTTACAAATGTTTAGTCTCTGCCATTGAGAAGCGAAAGAGGAGAAGTTGAAAATGAAGCAAAACTCATATCCATATCCCTATTACCAGTCGATGAATATGAACTGAACTTGTTAAACGAAGAAGAAGCAAACGAATTCACAAAATCATCGAACCCTTCTCCATTCCTCCCTCCTTCCATCACTTTCGGCGCTGATATCTCCTCCGGAACTCCGATCTCTCCCTCCAGAAACATCACCACCTGCCTCATACTCGGCCGTGCTGCCGCGGAATCGTTCGAACAAAACAACCCCAGTTTCAATATCATCACTGCCTCAGCTACATTGAAATCCCCTTTCAATTTTGGATCCATTACCTCCAGCAATTTCCCTTCCCTGTAATTCTCCCATACCCAATCCACCAGCACCAGCTCTTCCGACGAAGATTTTGGGTCGATTGGCCGCCGCCCGCAGGCCACTTCTAGCAGAAGTGCGCCGAAGGCATACACATCTGAGCTGGTGGTGGCTTTCCCGGTTCTGGGCAGCTCCGGTGCCAAATATCCCAGAGTTCCGACGACCCGAGTCGTGCTTGGGTTGGCCCCGTGTTCATATAGCCGAGCGAGGCCGAAATCGCCAAGCTTCCCATTCATCTCGCTGTCGAGCAGGACATTACTGGCTTTCACATCTCTATGAATCACCACCTGTGTTAAAAGAACATGAAACAACGATTAAATTCAGTCGCTTATTTAAATCTTGCAAAGAAAACAAGTCTATAATATCATTTCAGTAGATTTAACAAACCTGCTCGTAGCCTTCATGCAAGTAGAGCAAACCGGAAGCGACCCCCTTAATGATTCTAAATCTCTGTTGCCAGCTCAAATTCACATCCGGGTCGTCGAAAATGTAGTTATCCAAGCTCCCATTAGCCATAAAATCATAAACAAGAAGCAGATCGCCACGGCGGCGACACCATCCCAGCAACTGAACCAAGTTCCGGTGACGAAGCCGGCCAATGCTAGCGATTTCCGACACAAATTCCCTTAGGCCCTGCTTCGATTCGTGAGAAATTCGCTTCACAGCCACTTGGATTTTCGAATTCGGCAAAGTCCCCTTGTAAACTTTCCCGAACCCACCGCGCCCTAGAAGCTCTTTATCCCTAAATCGCTTAGTGGCTTTCTTGAGCTCCTTGTAAGAGTACCGATGAGGACCGATTTCGTGCTCCCAGGCCTCGATTATATCAGCGTTTTTTATCTTCCAAATGATTAAAACAGCAACACAAATCGCGATTATCACAATCAAAACAGCCGCAACAGAAACCCCAATTGTAAAAGCAGTGTGCTTTTTCTTCGGACCTGGAACAGAAGGCAAAGAAGACAGATCCAGAGACCGGGCTTGTCCATTCATACTGAAACTCCACCCCAACACATAGTGCGAACTTGCAAGAAGCCCAGTGGAGGCCGAGAACCCAACATACATAAACTCCTCAAGAATCGGAGAGAGATCTACATTAAACGACAGAATCGGCTTCTTGGGTTTGGTGGAAAACGGAGAAAGTGCCACCGTCAGAGAATTCACAGAGGAATCGTAATCGACCCAAGCTTGAATCGGCCTCCCACTTTTTAAGGTCAGGTTCTGCTTGGTGGGTCCATCGTCGACGAAATAGGAAGCGGTGGTGGAGACATTAGAAACCATATGGTTGAGATTAATTCCGACGTGGTTATCGTTGATATCGGCAAACTCAAAATCTTGAACAGTGTCGAACTCAACGGCGAAGAGATGGTTCGTGAAGTTTCCGACGTCTGTCGCATTGAGAAGGCCTAAATACTGACTGGGAAGTCCACGGAGGTTCTTCGATCGGGCGATGGTGAAGGCGAGGCCATGGCCGCCTAGAGTCGGGTACTCGGGGACGACGGCGATGACAAAAGCAGTGGAGAACGAAAAAACTTTACCGTCGGAGGAGTTTTTGAAACGAACGGGGGAACTGTAAAAGGCATGACCCTGTAATCGACTGGTATCATTTGTCAGTTTCAAGATTCCGTTCTGCTCGATCTTGGCGATGTCAGTGAGAGTTAAGTTGGCGGCGACGGCAGCGTCATCTTGAAATCCGGAGAAGTAGAGCTGCTGAGATGCGGCGGGGGCAGCGAGAAAGAGGAAGAAGAAGAAGAAACAAAGTAAACAGAGACGGACCATGATGGAAAGGGAAGGATTGGGATCTAGAAGGTTATGGTATGAATGTTGAAGTAGAACTGAAGAAGAAATTTGGTGTGGGGGGAAGAGGATAAGAAGTTGGCATGGTTAGCAGATTTTGTTGAATTGAAATTAGAGACAAAAGAAAGAGGAGAGAGAGAGAGAGAGTGAGGAATGAGAATGACAATTGTGAAGAAGGCAATGGCAACCTCTAAAATGGTTGATGTCAGCTCATAGTTCACATGAGGAATGAGGAACCCTTTCCTTACCCTAAATTCTTCTTAATTTCTTATTATTGTTCTAAAAACTATCACCCAAAACTTTACCTTTCGTTATATTTTTGTGCATATATTTTTTAC

mRNA sequence

TATATCAATAATTTCTTTTCTTAAATATACATCAAAGTAAGAATCTTACTACCCCAATGTTTGACTCCAAATTCCCATTTTTTCTTCTACTTCTGCCTTTTCTCCATCACTCTTTCTTAGCTACCAATTTTCCCGGAAACAGAGAACTAAGGAATTTACAAATGTTTAGTCTCTGCCATTGAGAAGCGAAAGAGGAGAAGTTGAAAATGAAGCAAAACTCATATCCATATCCCTATTACCAGTCGATGAATATGAACTGAACTTGTTAAACGAAGAAGAAGCAAACGAATTCACAAAATCATCGAACCCTTCTCCATTCCTCCCTCCTTCCATCACTTTCGGCGCTGATATCTCCTCCGGAACTCCGATCTCTCCCTCCAGAAACATCACCACCTGCCTCATACTCGGCCGTGCTGCCGCGGAATCGTTCGAACAAAACAACCCCAGTTTCAATATCATCACTGCCTCAGCTACATTGAAATCCCCTTTCAATTTTGGATCCATTACCTCCAGCAATTTCCCTTCCCTGTAATTCTCCCATACCCAATCCACCAGCACCAGCTCTTCCGACGAAGATTTTGGGTCGATTGGCCGCCGCCCGCAGGCCACTTCTAGCAGAAGTGCGCCGAAGGCATACACATCTGAGCTGGTGGTGGCTTTCCCGGTTCTGGGCAGCTCCGGTGCCAAATATCCCAGAGTTCCGACGACCCGAGTCGTGCTTGGGTTGGCCCCGTGTTCATATAGCCGAGCGAGGCCGAAATCGCCAAGCTTCCCATTCATCTCGCTGTCGAGCAGGACATTACTGGCTTTCACATCTCTATGAATCACCACCTGTGTTAAAAGAACATGAAACAACGATTAAATTCAGTCGCTTATTTAAATCTTGCAAAGAAAACAAGTCTATAATATCATTTCAGTAGATTTAACAAACCTGCTCGTAGCCTTCATGCAAGTAGAGCAAACCGGAAGCGACCCCCTTAATGATTCTAAATCTCTGTTGCCAGCTCAAATTCACATCCGGGTCGTCGAAAATGTAGTTATCCAAGCTCCCATTAGCCATAAAATCATAAACAAGAAGCAGATCGCCACGGCGGCGACACCATCCCAGCAACTGAACCAAGTTCCGGTGACGAAGCCGGCCAATGCTAGCGATTTCCGACACAAATTCCCTTAGGCCCTGCTTCGATTCGTGAGAAATTCGCTTCACAGCCACTTGGATTTTCGAATTCGGCAAAGTCCCCTTGTAAACTTTCCCGAACCCACCGCGCCCTAGAAGCTCTTTATCCCTAAATCGCTTAGTGGCTTTCTTGAGCTCCTTGTAAGAGTACCGATGAGGACCGATTTCGTGCTCCCAGGCCTCGATTATATCAGCGTTTTTTATCTTCCAAATGATTAAAACAGCAACACAAATCGCGATTATCACAATCAAAACAGCCGCAACAGAAACCCCAATTGTAAAAGCAGTGTGCTTTTTCTTCGGACCTGGAACAGAAGGCAAAGAAGACAGATCCAGAGACCGGGCTTGTCCATTCATACTGAAACTCCACCCCAACACATAGTGCGAACTTGCAAGAAGCCCAGTGGAGGCCGAGAACCCAACATACATAAACTCCTCAAGAATCGGAGAGAGATCTACATTAAACGACAGAATCGGCTTCTTGGGTTTGGTGGAAAACGGAGAAAGTGCCACCGTCAGAGAATTCACAGAGGAATCGTAATCGACCCAAGCTTGAATCGGCCTCCCACTTTTTAAGGTCAGGTTCTGCTTGGTGGGTCCATCGTCGACGAAATAGGAAGCGGTGGTGGAGACATTAGAAACCATATGGTTGAGATTAATTCCGACGTGGTTATCGTTGATATCGGCAAACTCAAAATCTTGAACAGTGTCGAACTCAACGGCGAAGAGATGGTTCGTGAAGTTTCCGACGTCTGTCGCATTGAGAAGGCCTAAATACTGACTGGGAAGTCCACGGAGGTTCTTCGATCGGGCGATGGTGAAGGCGAGGCCATGGCCGCCTAGAGTCGGGTACTCGGGGACGACGGCGATGACAAAAGCAGTGGAGAACGAAAAAACTTTACCGTCGGAGGAGTTTTTGAAACGAACGGGGGAACTGTAAAAGGCATGACCCTGTAATCGACTGGTATCATTTGTCAGTTTCAAGATTCCGTTCTGCTCGATCTTGGCGATGTCAGTGAGAGTTAAGTTGGCGGCGACGGCAGCGTCATCTTGAAATCCGGAGAAGTAGAGCTGCTGAGATGCGGCGGGGGCAGCGAGAAAGAGGAAGAAGAAGAAGAAACAAAGTAAACAGAGACGGACCATGATGGAAAGGGAAGGATTGGGATCTAGAAGGTTATGGTATGAATGTTGAAGTAGAACTGAAGAAGAAATTTGGTGTGGGGGGAAGAGGATAAGAAGTTGGCATGGTTAGCAGATTTTGTTGAATTGAAATTAGAGACAAAAGAAAGAGGAGAGAGAGAGAGAGAGTGAGGAATGAGAATGACAATTGTGAAGAAGGCAATGGCAACCTCTAAAATGGTTGATGTCAGCTCATAGTTCACATGAGGAATGAGGAACCCTTTCCTTACCCTAAATTCTTCTTAATTTCTTATTATTGTTCTAAAAACTATCACCCAAAACTTTACCTTTCGTTATATTTTTGTGCATATATTTTTTAC

Coding sequence (CDS)

ATGCAAGTAGAGCAAACCGGAAGCGACCCCCTTAATGATTCTAAATCTCTGTTGCCAGCTCAAATTCACATCCGGGTCGTCGAAAATGTAGTTATCCAAGCTCCCATTAGCCATAAAATCATAAACAAGAAGCAGATCGCCACGGCGGCGACACCATCCCAGCAACTGAACCAAGTTCCGGTGACGAAGCCGGCCAATGCTAGCGATTTCCGACACAAATTCCCTTAG

Protein sequence

MQVEQTGSDPLNDSKSLLPAQIHIRVVENVVIQAPISHKIINKKQIATAATPSQQLNQVPVTKPANASDFRHKFP

Homology

[Close]

BLAST of Cmc04g0119581 vs. ExPASy TrEMBL
Match: A0A5K1EF33 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS22383 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.8e-05
Identity = 26/76 (34.21%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 1   MQVEQTGSDPLNDSKSLLPAQIHI---RVVENVVIQAPISHKIINKKQIATAATPSQQLN 60
           ++VE+ G D   D++SL PA+  +    +VE+ +++A + H +++++++A  A P  +LN
Sbjct: 112 VEVEKGGGDAAEDTESLRPAEAWLGSRLLVEDELVEAAVRHVVVDEEEVAAPAAPPLELN 171

Query: 61  QVPVTKPANASDFRHK 74
           QVPV +P +A   RH+
Sbjct: 172 QVPVAQPTDAGHLRHE 187

The following BLAST results are available for this feature:

BLAST of Cmc04g0119581 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc04g0119581 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc04g0119581 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5K1EF33	8.8e-05	34.21	Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS22...	[more]

BLAST of Cmc04g0119581 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0119581.1	Cmc04g0119581.1	mRNA