Cmc04g0118521 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0118521
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Low temperature-induced protein
Location	CMiso1.1chr04: 35124610 .. 35126966 (+)
RNA-Seq Expression	Cmc04g0118521
Synteny	Cmc04g0118521

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGCCTGTAGATAAGTGAGTTAACTAAGTGTAAGGTGTAAGAGGTGAGAAAGTTGAATTAGGAATTTAGTATATTGTTCCCCTACTCTTAAAATTACAAATTTATGTTTTTTTTTTTTATTTTATTTGGGGAGTTTTTTGTATTATATTTTAATTGAGAAAATAACATATTATCATAGTAAACTTTCTATTATTGTAATTTAAGATTTATTAAGGCAAAAAGAAAAAGATGGAAGGGAAGGAGTAAAAGAAAGAAGTTAAAAAAAGAAGAGAGAAATGAGGAAGTGGTAGTAGAAAATAGGAAGTTCATTTAAAGGCGGCAGTTGAAGAGGTGAGGCGCGGGAGGGAGGGAAGGAGAAAGGGGAAAGTGGAAATGCACGGAGCAGGACAAGTAGATCGAATACCAAAGAGAATGGGTTCGGCCACATTCGTCGAAGTCCTTCTCGCCATCTTCATTCCACCCGTCGGCGTTTTTCTCCGCTATGGCATTGGGGTATTCCTTCCCTTCCTTTCCTTTCCCTTCCCTCTTTCCTCCCTTTTTTCCTTCAATTCCCATCAAATTTAATGTACCTTCAATACTATCCTTTCGTAACTAAGATTGTAATCATTTTGTTTTTATTATTATTTTAAAAAATTAAGTTTATTTCCATTTTAGGATTATTATTAAGTTGTTAGTCCAATAACAAAAACAAAAGTTTTTTTAGTTTTCAAAATTCGCTTTGATTTTTTCAAGAAAGAAGAAAGTTGAAGGTTGGAAAAGTGTTTATGGATTATCGAATAGGATTGAATTTTCTGTTTTTGTTTTTAAAAATTATGTCTATAGATAATATTTTCACCTTCAAATTTCTTCCTTTTGATATCTATTTTTTACTGTTTAGGAAAAGAAGTCAATTTTTGAAAACTAAAATGGTAACCAACAGAATCTAAAAGATTAAAATATTTTAAATGGTAACTGTGTCTTGAGTTTTTAACTTTTAAAAATTAGAAAAATGTAAAAGTTACAAGCCTAAATTTTCTTTTTTCTTTTTTAGTTTTTGAAAATTGTTCATCGGTTGAAACAATTTAAAATTGCCATCCAGAAAACTAAAACAAGTTCTAAAGAAAAACTTTTTGATTCAGTGAAAAAAACTCCCAAAAAAAGGAACTATTATGAGTAACAAAAACAAGAAAATTCAACGTGGAAGATGTTTAAATTTTCAAATATAATAATTATTTTACTGAAAAAACGAAGAAAAGAAAACTATAGTAGACTGTTTGTAAACTTAATTAAAATAATTAATCAATTATCAAATAATATAGTTTAAATAACATTTTAGATTTATATTCATTAATTATTCGAAATATTCACTTTTTAACTACCTTTTTTTTTTTTTTTTGGGTATAACTTCATTATACTTTAGATTTTGTTTATTTTGAGTGTTTATGCTTTTAAGTTTTAGAATCTTTATCCTCTGGACCTCAAATATATTTCTTGAAATTTTCTGTATATAGAGATAGATATAAAGCTTAACATAAAAAAGAATTGTAGGGTAGAACATCAAATGTAGCACTAAGATATACCCCTTTCATTCTGATTTTGATTTTTTTCTTTTCCTTTTTGGAAATTGTACAGTTATCTCATTATAATAGGTAATTTTTTTAAAAGGAAAAAGGTTTGGTTGTTTTTTAATTCTTAACTAATCTCTACAAACAAAAACAATTTTTGAAAACACTTCTAGTCAACTTACAACAAAAACATAAAACCAATATAGGAGGGTGGTGTCTATAAACATACTTCTCAAAGTTTTATCAGATAACTATATTTCCTGATTTTTAAATTGCTACATTTGAACTATATTAGCCAATTTAAAATAAAATCGATTTTAATTTAGGAAAACAGTCCTAAAATACCAAGACAAATGCAAATGTAATCTCTATCGAGTTAATTTTCAATAGTTTTTAGATTTTGAAAATAGCATTGGTAAGCTTTATTTTTAATTTTTTTAATTAAATAATTTAGATTTTATCGTATATCTAATTTGTTTTGTTATTTTTTAAAATGTTTCGATCATTTTGTTATATTTGCTCAAAATATTAATAACAAACTTTTTTTATTATTACTATTTTTTTGTTATATTATTGGGTATTAAAAATTGCAGATCGAATTTTGGATTGACTTGGTGCTCACATTTTTCGGATACATTCCCGGAATTGTTTACGCCGTTTACGTCTTGATTGGAACGCGATGACTGACTGACCTTATCGTCCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTGGATAATTTAATTTAGTGTTTTTATTGAGATCATTAATTTAATTTATGTTATTTTTCTATTCTCGAGCCTGC

mRNA sequence

GAGCCTGTAGATAAGTGAGTTAACTAAGTGTAAGGTGTAAGAGGTGAGAAAGTTGAATTAGGAATTTAGTATATTGTTCCCCTACTCTTAAAATTACAAATTTATGTTTTTTTTTTTTATTTTATTTGGGGAGTTTTTTGTATTATATTTTAATTGAGAAAATAACATATTATCATAGTAAACTTTCTATTATTGTAATTTAAGATTTATTAAGGCAAAAAGAAAAAGATGGAAGGGAAGGAGTAAAAGAAAGAAGTTAAAAAAAGAAGAGAGAAATGAGGAAGTGGTAGTAGAAAATAGGAAGTTCATTTAAAGGCGGCAGTTGAAGAGGTGAGGCGCGGGAGGGAGGGAAGGAGAAAGGGGAAAGTGGAAATGCACGGAGCAGGACAAGTAGATCGAATACCAAAGAGAATGGGTTCGGCCACATTCGTCGAAGTCCTTCTCGCCATCTTCATTCCACCCGTCGGCGTTTTTCTCCGCTATGGCATTGGGATCGAATTTTGGATTGACTTGGTGCTCACATTTTTCGGATACATTCCCGGAATTGTTTACGCCGTTTACGTCTTGATTGGAACGCGATGACTGACTGACCTTATCGTCCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTGGATAATTTAATTTAGTGTTTTTATTGAGATCATTAATTTAATTTATGTTATTTTTCTATTCTCGAGCCTGC

Coding sequence (CDS)

ATGCACGGAGCAGGACAAGTAGATCGAATACCAAAGAGAATGGGTTCGGCCACATTCGTCGAAGTCCTTCTCGCCATCTTCATTCCACCCGTCGGCGTTTTTCTCCGCTATGGCATTGGGATCGAATTTTGGATTGACTTGGTGCTCACATTTTTCGGATACATTCCCGGAATTGTTTACGCCGTTTACGTCTTGATTGGAACGCGATGA

Protein sequence

MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR

Homology

[Close]

BLAST of Cmc04g0118521 vs. NCBI nr
Match: XP_008442650.1 (PREDICTED: low temperature-induced protein lt101.2-like [Cucumis melo])

HSP 1 Score: 139.0 bits (349), Expect = 1.5e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVY 60
          MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVY
Sbjct: 1  MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVY 60

Query: 61 AVYVLIGTR 70
          AVYVLIGTR
Sbjct: 61 AVYVLIGTR 69

[Close]

BLAST of Cmc04g0118521 vs. NCBI nr
Match: XP_004137807.1 (low temperature-induced protein lt101.2 [Cucumis sativus] >KGN58938.1 hypothetical protein Csa_001360 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 1.4e-27
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVY 60
          M G GQVDRIPKRMGSATF+EVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGI+Y
Sbjct: 1  MLGGGQVDRIPKRMGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIY 60

Query: 61 AVYVLIGTR 70
          AVYVLIGTR
Sbjct: 61 AVYVLIGTR 69

[Close]

BLAST of Cmc04g0118521 vs. NCBI nr
Match: XP_038906189.1 (low temperature-induced protein lt101.2-like [Benincasa hispida])

HSP 1 Score: 120.2 bits (300), Expect = 7.2e-24
Identity = 58/66 (87.88%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 4  AGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVY 63
          A Q DRIPKRMGSATF+EVLLAIFIPP+GVFLRYGIGIEFWIDLVLT FGY+PGI+YAVY
Sbjct: 15 AMQGDRIPKRMGSATFIEVLLAIFIPPLGVFLRYGIGIEFWIDLVLTLFGYLPGIIYAVY 74

Query: 64 VLIGTR 70
          VL+GTR
Sbjct: 75 VLVGTR 80

[Close]

BLAST of Cmc04g0118521 vs. NCBI nr
Match: XP_022945600.1 (low temperature-induced protein lt101.2-like [Cucurbita moschata] >XP_023005767.1 low temperature-induced protein lt101.2-like [Cucurbita maxima] >XP_023540674.1 low temperature-induced protein lt101.2-like [Cucurbita pepo subsp. pepo] >KAG7027999.1 Low temperature-induced protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 112.8 bits (281), Expect = 1.1e-21
Identity = 53/62 (85.48%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 6  QVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL 65
          Q +RIPKRMGSATFVEVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GY+PGI+YAVYVL
Sbjct: 2  QGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVL 61

Query: 66 IG 68
          +G
Sbjct: 62 VG 63

[Close]

BLAST of Cmc04g0118521 vs. NCBI nr
Match: XP_022145681.1 (low temperature-induced protein lt101.2-like [Momordica charantia])

HSP 1 Score: 112.5 bits (280), Expect = 1.5e-21
Identity = 54/64 (84.38%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 6  QVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL 65
          Q DRIPKRMGSATF+EVLLA+FIPP+GVFLRYGIGIEFWI L+LTF GY+PGIVYAVYVL
Sbjct: 2  QGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIALLLTFLGYLPGIVYAVYVL 61

Query: 66 IGTR 70
          +G R
Sbjct: 62 VGMR 65

[Close]

BLAST of Cmc04g0118521 vs. ExPASy Swiss-Prot
Match: Q9ARD5 (Low temperature-induced protein lt101.2 OS=Hordeum vulgare OX=4513 GN=LT101.2 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 7.5e-16
Identity = 39/53 (73.58%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 14 MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLI 67
          M SATF+EV+LAI +PPVGVFLRYG+ +EFWI L+LT  GYIPGI+YAVYVL+
Sbjct: 1  MASATFIEVILAIILPPVGVFLRYGLAVEFWICLLLTLLGYIPGIIYAVYVLV 53

[Close]

BLAST of Cmc04g0118521 vs. ExPASy Swiss-Prot
Match: P68178 (Salt stress-induced hydrophobic peptide ESI3 OS=Thinopyrum elongatum OX=4588 GN=ESI3 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.8e-15
Identity = 39/53 (73.58%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 14 MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLI 67
          MGSAT +EV+LAI +PPVGVFLRY +G+EFWI L+LT  GYIPGI+YAVYVL+
Sbjct: 1  MGSATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVLV 53

[Close]

BLAST of Cmc04g0118521 vs. ExPASy Swiss-Prot
Match: P68179 (Low temperature-induced protein lt101.1 OS=Hordeum vulgare OX=4513 GN=LT101.1 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.8e-15
Identity = 39/53 (73.58%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 14 MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLI 67
          MGSAT +EV+LAI +PPVGVFLRY +G+EFWI L+LT  GYIPGI+YAVYVL+
Sbjct: 1  MGSATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVLV 53

[Close]

BLAST of Cmc04g0118521 vs. ExPASy Swiss-Prot
Match: Q9ZNQ7 (Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-14
Identity = 35/52 (67.31%), Postives = 46/52 (88.46%), Query Frame = 0


Query: 14 MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL 66
          M +ATFV++++AI +PP+GVFLR+G G+EFWI LVLT  GYIPGI+YA+YVL
Sbjct: 1  MSTATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVL 52

[Close]

BLAST of Cmc04g0118521 vs. ExPASy Swiss-Prot
Match: Q9FE70 (UPF0057 membrane protein At1g57550 OS=Arabidopsis thaliana OX=3702 GN=At1g57550 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 9.1e-14
Identity = 37/52 (71.15%), Postives = 46/52 (88.46%), Query Frame = 0


Query: 14 MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL 66
          MGS  F+EVL AIFIPPVGVFLRYG+G+EFW+ L+LT F +IPG++YA+YVL
Sbjct: 1  MGS--FLEVLCAIFIPPVGVFLRYGLGLEFWVCLLLTLFAFIPGLIYAIYVL 50

[Close]

BLAST of Cmc04g0118521 vs. ExPASy TrEMBL
Match: A0A1S3B667 (low temperature-induced protein lt101.2-like OS=Cucumis melo OX=3656 GN=LOC103486456 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 7.2e-30
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVY 60
          MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVY
Sbjct: 1  MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVY 60

Query: 61 AVYVLIGTR 70
          AVYVLIGTR
Sbjct: 61 AVYVLIGTR 69

[Close]

BLAST of Cmc04g0118521 vs. ExPASy TrEMBL
Match: A0A0A0LAU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736860 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.8e-28
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVY 60
          M G GQVDRIPKRMGSATF+EVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGI+Y
Sbjct: 1  MLGGGQVDRIPKRMGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIY 60

Query: 61 AVYVLIGTR 70
          AVYVLIGTR
Sbjct: 61 AVYVLIGTR 69

[Close]

BLAST of Cmc04g0118521 vs. ExPASy TrEMBL
Match: A0A6J1KU26 (low temperature-induced protein lt101.2-like OS=Cucurbita maxima OX=3661 GN=LOC111498668 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.6e-22
Identity = 53/62 (85.48%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 6  QVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL 65
          Q +RIPKRMGSATFVEVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GY+PGI+YAVYVL
Sbjct: 2  QGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVL 61

Query: 66 IG 68
          +G
Sbjct: 62 VG 63

[Close]

BLAST of Cmc04g0118521 vs. ExPASy TrEMBL
Match: A0A6J1G1E1 (low temperature-induced protein lt101.2-like OS=Cucurbita moschata OX=3662 GN=LOC111449786 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.6e-22
Identity = 53/62 (85.48%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 6  QVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL 65
          Q +RIPKRMGSATFVEVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GY+PGI+YAVYVL
Sbjct: 2  QGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVL 61

Query: 66 IG 68
          +G
Sbjct: 62 VG 63

[Close]

BLAST of Cmc04g0118521 vs. ExPASy TrEMBL
Match: A0A6J1CX15 (low temperature-induced protein lt101.2-like OS=Momordica charantia OX=3673 GN=LOC111015073 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 7.3e-22
Identity = 54/64 (84.38%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 6  QVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL 65
          Q DRIPKRMGSATF+EVLLA+FIPP+GVFLRYGIGIEFWI L+LTF GY+PGIVYAVYVL
Sbjct: 2  QGDRIPKRMGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIALLLTFLGYLPGIVYAVYVL 61

Query: 66 IGTR 70
          +G R
Sbjct: 62 VGMR 65

[Close]

BLAST of Cmc04g0118521 vs. TAIR 10
Match: AT2G38905.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 86.7 bits (213), Expect = 8.2e-18
Identity = 39/54 (72.22%), Postives = 48/54 (88.89%), Query Frame = 0


Query: 14 MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIG 68
          MGS TF+E++LAI +PPVGVFLRYG G+EFWI L+LT  GYIPGI+YA+YVL+G
Sbjct: 1  MGSETFLEIILAILLPPVGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 54

[Close]

BLAST of Cmc04g0118521 vs. TAIR 10
Match: AT3G05880.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-15
Identity = 35/52 (67.31%), Postives = 46/52 (88.46%), Query Frame = 0


Query: 14 MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL 66
          M +ATFV++++AI +PP+GVFLR+G G+EFWI LVLT  GYIPGI+YA+YVL
Sbjct: 1  MSTATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVL 52

[Close]

BLAST of Cmc04g0118521 vs. TAIR 10
Match: AT1G57550.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 77.0 bits (188), Expect = 6.5e-15
Identity = 37/52 (71.15%), Postives = 46/52 (88.46%), Query Frame = 0


Query: 14 MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL 66
          MGS  F+EVL AIFIPPVGVFLRYG+G+EFW+ L+LT F +IPG++YA+YVL
Sbjct: 1  MGS--FLEVLCAIFIPPVGVFLRYGLGLEFWVCLLLTLFAFIPGLIYAIYVL 50

[Close]

BLAST of Cmc04g0118521 vs. TAIR 10
Match: AT3G05890.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-14
Identity = 32/52 (61.54%), Postives = 46/52 (88.46%), Query Frame = 0


Query: 14 MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL 66
          M +ATFVE++LAI +PP+GVFL++G  +EFWI L+LT FGY+PGI+YA+Y++
Sbjct: 1  MSTATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYII 52

[Close]

BLAST of Cmc04g0118521 vs. TAIR 10
Match: AT4G30650.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 53.5 bits (127), Expect = 7.7e-08
Identity = 28/49 (57.14%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 19 FVEVLLAIFIPPVGVFLRYG-IGIEFWIDLVLTFFGYIPGIVYAVYVLI 67
          F E+L+AI +PP+GV L+ G   +EF I LVLT  GYIPGI+YA+YV++
Sbjct: 8  FCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIV 56

The following BLAST results are available for this feature:

BLAST of Cmc04g0118521 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442650.1	1.5e-29	100.00	PREDICTED: low temperature-induced protein lt101.2-like [Cucumis melo]	[more]
XP_004137807.1	1.4e-27	94.20	low temperature-induced protein lt101.2 [Cucumis sativus] >KGN58938.1 hypothetic...	[more]
XP_038906189.1	7.2e-24	87.88	low temperature-induced protein lt101.2-like [Benincasa hispida]	[more]
XP_022945600.1	1.1e-21	85.48	low temperature-induced protein lt101.2-like [Cucurbita moschata] >XP_023005767....	[more]
XP_022145681.1	1.5e-21	84.38	low temperature-induced protein lt101.2-like [Momordica charantia]	[more]

BLAST of Cmc04g0118521 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ARD5	7.5e-16	73.58	Low temperature-induced protein lt101.2 OS=Hordeum vulgare OX=4513 GN=LT101.2 PE...	[more]
P68178	2.8e-15	73.58	Salt stress-induced hydrophobic peptide ESI3 OS=Thinopyrum elongatum OX=4588 GN=...	[more]
P68179	2.8e-15	73.58	Low temperature-induced protein lt101.1 OS=Hordeum vulgare OX=4513 GN=LT101.1 PE...	[more]
Q9ZNQ7	1.8e-14	67.31	Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1	[more]
Q9FE70	9.1e-14	71.15	UPF0057 membrane protein At1g57550 OS=Arabidopsis thaliana OX=3702 GN=At1g57550 ...	[more]

BLAST of Cmc04g0118521 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B667	7.2e-30	100.00	low temperature-induced protein lt101.2-like OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A0A0LAU7	6.8e-28	94.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736860 PE=3 SV=1	[more]
A0A6J1KU26	5.6e-22	85.48	low temperature-induced protein lt101.2-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1G1E1	5.6e-22	85.48	low temperature-induced protein lt101.2-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1CX15	7.3e-22	84.38	low temperature-induced protein lt101.2-like OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of Cmc04g0118521 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38905.1	8.2e-18	72.22	Low temperature and salt responsive protein family	[more]
AT3G05880.1	1.3e-15	67.31	Low temperature and salt responsive protein family	[more]
AT1G57550.1	6.5e-15	71.15	Low temperature and salt responsive protein family	[more]
AT3G05890.1	1.9e-14	61.54	Low temperature and salt responsive protein family	[more]
AT4G30650.1	7.7e-08	57.14	Low temperature and salt responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000612	Proteolipid membrane potential modulator	PFAM	PF01679	Pmp3	coord: 19..65 e-value: 4.2E-18 score: 65.3
IPR000612	Proteolipid membrane potential modulator	PANTHER	PTHR21659	HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED	coord: 14..66
IPR000612	Proteolipid membrane potential modulator	PROSITE	PS01309	UPF0057	coord: 23..38
None	No IPR available	PANTHER	PTHR21659:SF65	OS03G0286900 PROTEIN	coord: 14..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0118521.1	Cmc04g0118521.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane