Cmc04g0116341 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0116341
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCMiso1.1chr04: 33953280 .. 33955154 (-)
RNA-Seq ExpressionCmc04g0116341
SyntenyCmc04g0116341
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCAAATCCAAATGCCAGCACATCTTCATCAACCACGGAAAGCTTCGATTTTCCTCGGCTTCTCTTTCCTGGCAATTTGACGTGAATTGCAATTCCAATGAACCAACCCCATGTACCCAAGAATCTGAATCTTCTCACGTTCTCCATTATGACCCAAAACGCTTTAGAAATTCTTTGTTGAGTTGCAGAAATCTCTTTCAAGTTAGGCAGGTTCATGCTCAGATTGCTACCAATGGCGCATTCAGAAACCTCGCCGTTGCTAATAAACTTCTTTTCTTGTATGTCGAACGTGGTGCCTTGGAGGATGCTCAGGAACTGTTCGATGGAATGTCTAAGAGAGACCCTTATAGCTGGAGTATAATAGTTGGTGGGTATGCCAAAGTTGGAGATTTTTTTTCTTGCTTTTGGATGTTTAGGGAGCTTCTTCGTTGTGGGACGCCGTTAGATGACTATAATGCGCCAATTGTTATAAGGGCTTGCAGGGATTTGAAGGACCTGAAATGCGGTAGGCTTATTCACTGTATCACTTTGAAATGTGGGTTGGATTATGGTCAGTTTGTTTGTGCGTCCCTTGTTGATATGTATGCTAGATGTAAAGTGATCGAGGATGCCCGCCAAATTTTTGTTAAAATGTGGAAGAGAGACCTTGCGACATGGACGGTGATGATTGGCGCCTTGGCTGAATCCGGAGTTCCTGTTGAGTCATTGGCTTTCTTTGATAGGATGAGGGATGAAGGTATTGTCCCCGATAAGGTGGCGTTGGTAACTGTTGTTTATGCTTGTGCAAAGTTGGGGGCCATGAATAAGGCGAAGGCAATTCATGCCTATATTAATGGAACCGGATATTCTTTGGATGTAATTTTAGGAACAGCAATGATCGATATGTATGCGAAATGTGGGAGTGTCGATTCTGCGAGGTGGATTTTTGATCGGATGCAAGTGAGGAACGTGATTACATGGAGTGCCATGATTGCAGCCTATGGATATCATGGACAAGGTGAGAAAGCGCTCGAGTTATTCCCAATGATGTTAGGCTGCGGAATATTGCCAAATAGGATCACCTTTGTCTCATTGTTGTATGCTTGTAGTCATGCCGGTCTTATTGAAGAGGGCCAGAGATTTTTTTCCTCAATGTGGGACGAGTATGGTGTAACACCGGATGTTAAACACTATACGTGTATGGTTGATCTCTTAGGTCGAGCAGGGAGGTTGGATGAGGCCTTGGAAATGATAGAAGGCATGACAGTTGAGAAAGATGAGGCACTATGGGGAGCATTGCTGGGGGCATGTCGGATTCACCGACGTTTAGATTTGGCCGAGAGGGTGGCAACATCTCTTCATAAGCTACAGTCACAGAACCCAGGGCATTACGTTTTGCTTTCGAATATATATGCAAATGCTGGCAAGTGGGACGATATGGCAAAAATAAGAGATCTGATGACTAAGAGTGGCCTAAGGAAGATTCCTGGATGGACATGGATTGAGGTGAACGAAAAACTCTATCAATTCGGTGTTGGAGATAAAACGCATCCCAGGTCAAGTGAGATATACAAGATGCTGAAACGAATAGGTGAGAAGCTCGAGTTGGCTGGCTATCTCCCAGACACAAATTATGCACTGCATGATGTTGATGAGGAGGTAAAGCAAGGACTTCTTTATGCACACAGTGAAAAGTTGGCAATTGCATTTGGGTTATTAGTCATATCTCAAGGCTATCCTATAAGGATTACAAAGAATCTTAGAGTTTGTGGTGACTGCCATACATTTTGCAAGTTTGTATCATTTATTGAACAGAGAACAATCATAGTACGCGATGCCAAACGTTTTCACCACTTCAAGGAAGGGGTTTGCTCATGCAGAGACTACTGGTAA

mRNA sequence

ATGCTCAAATCCAAATGCCAGCACATCTTCATCAACCACGGAAAGCTTCGATTTTCCTCGGCTTCTCTTTCCTGGCAATTTGACGTGAATTGCAATTCCAATGAACCAACCCCATGTACCCAAGAATCTGAATCTTCTCACGTTCTCCATTATGACCCAAAACGCTTTAGAAATTCTTTGTTGAGTTGCAGAAATCTCTTTCAAGTTAGGCAGGTTCATGCTCAGATTGCTACCAATGGCGCATTCAGAAACCTCGCCGTTGCTAATAAACTTCTTTTCTTGTATGTCGAACGTGGTGCCTTGGAGGATGCTCAGGAACTGTTCGATGGAATGTCTAAGAGAGACCCTTATAGCTGGAGTATAATAGTTGGTGGGGAGCTTCTTCGTTGTGGGACGCCGTTAGATGACTATAATGCGCCAATTGTTATAAGGGCTTGCAGGGATTTGAAGGACCTGAAATGCGGTAGGCTTATTCACTGTATCACTTTGAAATGTGGGTTGGATTATGGTCAGTTTGTTTGTGCGTCCCTTGTTGATATGTATGCTAGATGTAAAGTGATCGAGGATGCCCGCCAAATTTTTGTTAAAATGTGGAAGAGAGACCTTGCGACATGGACGGTGATGATTGGCGCCTTGGCTGAATCCGGAGTTCCTGTTGAGTCATTGGCTTTCTTTGATAGGATGAGGGATGAAGGTATTGTCCCCGATAAGGTGGCGTTGGTAACTGTTGTTTATGCTTGTGCAAAGTTGGGGGCCATGAATAAGGCGAAGGCAATTCATGCCTATATTAATGGAACCGGATATTCTTTGGATGTAATTTTAGGAACAGCAATGATCGATATGTATGCGAAATGTGGGAGTGTCGATTCTGCGAGGTGGATTTTTGATCGGATGCAAGTGAGGAACGTGATTACATGGAGTGCCATGATTGCAGCCTATGGATATCATGGACAAGGTGAGAAAGCGCTCGAGTTATTCCCAATGATGTTAGGCTGCGGAATATTGCCAAATAGGATCACCTTTGTCTCATTGTTGTATGCTTGTAGTCATGCCGGTCTTATTGAAGAGGGCCAGAGATTTTTTTCCTCAATGTGGGACGAGTATGGTGTAACACCGGATGTTAAACACTATACGTGTATGGTTGATCTCTTAGGTCGAGCAGGGAGGTTGGATGAGGCCTTGGAAATGATAGAAGGCATGACAGTTGAGAAAGATGAGGCACTATGGGGAGCATTGCTGGGGGCATGTCGGATTCACCGACGTTTAGATTTGGCCGAGAGGGTGGCAACATCTCTTCATAAGCTACAGTCACAGAACCCAGGGCATTACGTTTTGCTTTCGAATATATATGCAAATGCTGGCAAGTGGGACGATATGGCAAAAATAAGAGATCTGATGACTAAGAGTGGCCTAAGGAAGATTCCTGGATGGACATGGATTGAGGTGAACGAAAAACTCTATCAATTCGGTGTTGGAGATAAAACGCATCCCAGGTCAAGTGAGATATACAAGATGCTGAAACGAATAGGTGAGAAGCTCGAGTTGGCTGGCTATCTCCCAGACACAAATTATGCACTGCATGATGTTGATGAGGAGGTAAAGCAAGGACTTCTTTATGCACACAGTGAAAAGTTGGCAATTGCATTTGGGTTATTAGTCATATCTCAAGGCTATCCTATAAGGATTACAAAGAATCTTAGAGTTTGTGGTGACTGCCATACATTTTGCAAGTTTGTATCATTTATTGAACAGAGAACAATCATAGTACGCGATGCCAAACGTTTTCACCACTTCAAGGAAGGGGTTTGCTCATGCAGAGACTACTGGTAA

Coding sequence (CDS)

ATGCTCAAATCCAAATGCCAGCACATCTTCATCAACCACGGAAAGCTTCGATTTTCCTCGGCTTCTCTTTCCTGGCAATTTGACGTGAATTGCAATTCCAATGAACCAACCCCATGTACCCAAGAATCTGAATCTTCTCACGTTCTCCATTATGACCCAAAACGCTTTAGAAATTCTTTGTTGAGTTGCAGAAATCTCTTTCAAGTTAGGCAGGTTCATGCTCAGATTGCTACCAATGGCGCATTCAGAAACCTCGCCGTTGCTAATAAACTTCTTTTCTTGTATGTCGAACGTGGTGCCTTGGAGGATGCTCAGGAACTGTTCGATGGAATGTCTAAGAGAGACCCTTATAGCTGGAGTATAATAGTTGGTGGGGAGCTTCTTCGTTGTGGGACGCCGTTAGATGACTATAATGCGCCAATTGTTATAAGGGCTTGCAGGGATTTGAAGGACCTGAAATGCGGTAGGCTTATTCACTGTATCACTTTGAAATGTGGGTTGGATTATGGTCAGTTTGTTTGTGCGTCCCTTGTTGATATGTATGCTAGATGTAAAGTGATCGAGGATGCCCGCCAAATTTTTGTTAAAATGTGGAAGAGAGACCTTGCGACATGGACGGTGATGATTGGCGCCTTGGCTGAATCCGGAGTTCCTGTTGAGTCATTGGCTTTCTTTGATAGGATGAGGGATGAAGGTATTGTCCCCGATAAGGTGGCGTTGGTAACTGTTGTTTATGCTTGTGCAAAGTTGGGGGCCATGAATAAGGCGAAGGCAATTCATGCCTATATTAATGGAACCGGATATTCTTTGGATGTAATTTTAGGAACAGCAATGATCGATATGTATGCGAAATGTGGGAGTGTCGATTCTGCGAGGTGGATTTTTGATCGGATGCAAGTGAGGAACGTGATTACATGGAGTGCCATGATTGCAGCCTATGGATATCATGGACAAGGTGAGAAAGCGCTCGAGTTATTCCCAATGATGTTAGGCTGCGGAATATTGCCAAATAGGATCACCTTTGTCTCATTGTTGTATGCTTGTAGTCATGCCGGTCTTATTGAAGAGGGCCAGAGATTTTTTTCCTCAATGTGGGACGAGTATGGTGTAACACCGGATGTTAAACACTATACGTGTATGGTTGATCTCTTAGGTCGAGCAGGGAGGTTGGATGAGGCCTTGGAAATGATAGAAGGCATGACAGTTGAGAAAGATGAGGCACTATGGGGAGCATTGCTGGGGGCATGTCGGATTCACCGACGTTTAGATTTGGCCGAGAGGGTGGCAACATCTCTTCATAAGCTACAGTCACAGAACCCAGGGCATTACGTTTTGCTTTCGAATATATATGCAAATGCTGGCAAGTGGGACGATATGGCAAAAATAAGAGATCTGATGACTAAGAGTGGCCTAAGGAAGATTCCTGGATGGACATGGATTGAGGTGAACGAAAAACTCTATCAATTCGGTGTTGGAGATAAAACGCATCCCAGGTCAAGTGAGATATACAAGATGCTGAAACGAATAGGTGAGAAGCTCGAGTTGGCTGGCTATCTCCCAGACACAAATTATGCACTGCATGATGTTGATGAGGAGGTAAAGCAAGGACTTCTTTATGCACACAGTGAAAAGTTGGCAATTGCATTTGGGTTATTAGTCATATCTCAAGGCTATCCTATAAGGATTACAAAGAATCTTAGAGTTTGTGGTGACTGCCATACATTTTGCAAGTTTGTATCATTTATTGAACAGAGAACAATCATAGTACGCGATGCCAAACGTTTTCACCACTTCAAGGAAGGGGTTTGCTCATGCAGAGACTACTGGTAA

Protein sequence

MLKSKCQHIFINHGKLRFSSASLSWQFDVNCNSNEPTPCTQESESSHVLHYDPKRFRNSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSWSIIVGGELLRCGTPLDDYNAPIVIRACRDLKDLKCGRLIHCITLKCGLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESGVPVESLAFFDRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVEKDEALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIRDLMTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTNYALHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFCKFVSFIEQRTIIVRDAKRFHHFKEGVCSCRDYW
Homology
[Close]
BLAST of Cmc04g0116341 vs. NCBI nr
Match: XP_008442861.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Cucumis melo] >KAA0043862.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25274.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1258.0 bits (3254), Expect = 0.0e+00
Identity = 609/624 (97.60%), Postives = 609/624 (97.60%), Query Frame = 0 

Query: 1   MLKSKCQHIFINHGKLRFSSASLSWQFDVNCNSNEPTPCTQESESSHVLHYDPKRFRNSL 60
           MLKSKCQHIFINHGKLRFSSASLSWQFDVNCNSNEPTPCTQESESSHVLHYDPKRFRNSL
Sbjct: 1   MLKSKCQHIFINHGKLRFSSASLSWQFDVNCNSNEPTPCTQESESSHVLHYDPKRFRNSL 60

Query: 61  LSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSWS 120
           LSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSWS
Sbjct: 61  LSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSWS 120

Query: 121 IIVGG---------------ELLRCGTPLDDYNAPIVIRACRDLKDLKCGRLIHCITLKC 180
           IIVGG               ELLRCGTPLDDYNAPIVIRACRDLKDLKCGRLIHCITLKC
Sbjct: 121 IIVGGYAKVGDFFSCFWMFRELLRCGTPLDDYNAPIVIRACRDLKDLKCGRLIHCITLKC 180

Query: 181 GLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESGVPVESLAFF 240
           GLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESGVPVESLAFF
Sbjct: 181 GLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESGVPVESLAFF 240

Query: 241 DRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC 300
           DRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC
Sbjct: 241 DRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC 300

Query: 301 GSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVSLL 360
           GSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVSLL
Sbjct: 301 GSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVSLL 360

Query: 361 YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVEKD 420
           YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVEKD
Sbjct: 361 YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVEKD 420

Query: 421 EALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIRDL 480
           EALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIRDL
Sbjct: 421 EALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIRDL 480

Query: 481 MTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTNYA 540
           MTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTNYA
Sbjct: 481 MTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTNYA 540

Query: 541 LHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFCKFVSFIEQR 600
           LHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFCKFVSFIEQR
Sbjct: 541 LHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFCKFVSFIEQR 600

Query: 601 TIIVRDAKRFHHFKEGVCSCRDYW 610
           TIIVRDAKRFHHFKEGVCSCRDYW
Sbjct: 601 TIIVRDAKRFHHFKEGVCSCRDYW 624

[Close]
BLAST of Cmc04g0116341 vs. NCBI nr
Match: XP_004149219.1 (pentatricopeptide repeat-containing protein At4g21065 [Cucumis sativus] >KGN59149.1 hypothetical protein Csa_002158 [Cucumis sativus])

HSP 1 Score: 1163.7 bits (3009), Expect = 0.0e+00
Identity = 561/624 (89.90%), Postives = 583/624 (93.43%), Query Frame = 0 

Query: 1   MLKSKCQHIFINHGKLRFSSASLSWQFDVNCNSNEPTPCTQESESSHVLHYDPKRFRNSL 60
           MLKSKC HIFIN+GKLRFSSASLSWQFDVNCNSNEPTPC+QESE SHVLHYD KRFR+SL
Sbjct: 1   MLKSKCHHIFINYGKLRFSSASLSWQFDVNCNSNEPTPCSQESECSHVLHYDTKRFRSSL 60

Query: 61  LSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSWS 120
           LSCRNLFQVRQVHAQIATNGAFRNLAVANKLL++YVERGALEDAQELFDGMSKR PYSWS
Sbjct: 61  LSCRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWS 120

Query: 121 IIVGG---------------ELLRCGTPLDDYNAPIVIRACRDLKDLKCGRLIHCITLKC 180
           +IVGG               ELLR G PLDDY+AP+VIRACRDLKDLKCGRLIHCITLKC
Sbjct: 121 VIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKC 180

Query: 181 GLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESGVPVESLAFF 240
           GLDYG FVCA+LVDMYARCKV+EDA QIFVKMWKRDLATWTVMIGALAESGVPVESL FF
Sbjct: 181 GLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFF 240

Query: 241 DRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC 300
           DRMR++GIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC
Sbjct: 241 DRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC 300

Query: 301 GSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVSLL 360
           GSV+SARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMML  GILPNRITFVSLL
Sbjct: 301 GSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLL 360

Query: 361 YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVEKD 420
           YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGM VEKD
Sbjct: 361 YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKD 420

Query: 421 EALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIRDL 480
           E LWGALLGACRIHR LDLAERVA SL KLQSQ PGHYVLLSNIYANAGKW+DMAK RDL
Sbjct: 421 EVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDL 480

Query: 481 MTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTNYA 540
           MTK GLRKIPG TWIEV EKLYQFGVGDKTHPRS+EIYKMLKR+GEKLE+AGY PDTN  
Sbjct: 481 MTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDV 540

Query: 541 LHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFCKFVSFIEQR 600
           L+DVDEEVKQGLLY+HSEKLAIAFGLLV+ QG+PIRITKNLRVCGDCHTFCKFVS IEQ+
Sbjct: 541 LYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQK 600

Query: 601 TIIVRDAKRFHHFKEGVCSCRDYW 610
           TIIVRDAKRFHHFKEGVCSCRDYW
Sbjct: 601 TIIVRDAKRFHHFKEGVCSCRDYW 624

[Close]
BLAST of Cmc04g0116341 vs. NCBI nr
Match: XP_038903368.1 (pentatricopeptide repeat-containing protein At2g33760-like [Benincasa hispida])

HSP 1 Score: 1051.2 bits (2717), Expect = 3.4e-303
Identity = 515/633 (81.36%), Postives = 549/633 (86.73%), Query Frame = 0 

Query: 1   MLKSKCQHIFINHGKLRFSSAS---------LSWQFDVNCNSNEPTPCTQESESSHVLHY 60
           MLKSKC +IFINHGKLRFSSAS         LS + D NCNSNEP   TQESESS+VLH+
Sbjct: 1   MLKSKCSNIFINHGKLRFSSASATTTARETFLSSESDANCNSNEPNSSTQESESSYVLHF 60

Query: 61  DPKRFRNSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGM 120
           DPKRF    LSCRNLFQVRQVHAQIA+NGAFRNLAVANKLLF+Y + GALEDA  LFD M
Sbjct: 61  DPKRFITLFLSCRNLFQVRQVHAQIASNGAFRNLAVANKLLFMYAQHGALEDAHVLFDEM 120

Query: 121 SKRDPYSWSIIVGG---------------ELLRCGTPLDDYNAPIVIRACRDLKDLKCGR 180
           ++RDPYSWS+IVGG               ELLR G PLD+Y APIVIRACR+ K L+ GR
Sbjct: 121 TERDPYSWSVIVGGYAKVGDFSSCFWMFRELLRYGMPLDNYTAPIVIRACRNSKGLQFGR 180

Query: 181 LIHCITLKCGLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESG 240
           LIHC+TLKCGLDY  FVCASLVDMYARCKVIEDARQ+F KM KRDL TWTVMIGALAE  
Sbjct: 181 LIHCVTLKCGLDYDHFVCASLVDMYARCKVIEDARQVFDKMQKRDLVTWTVMIGALAECK 240

Query: 241 VPVESLAFFDRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGT 300
             VESLA FDRMRDEGIVPDKVALVTVVYACAKLGAMNKA+AIH YINGT +SLDVILGT
Sbjct: 241 SAVESLALFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHNYINGTRFSLDVILGT 300

Query: 301 AMIDMYAKCGSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILP 360
           AMIDMYAKCGSVDSAR IFD+MQVRNVITWSAMIAAYGYHGQGEKALEL PMML  GILP
Sbjct: 301 AMIDMYAKCGSVDSAREIFDQMQVRNVITWSAMIAAYGYHGQGEKALELLPMMLSSGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEM 420
           NRITFVSLLYACSHAGLIEEGQRFF SMW++YGV PDVKHYTCMVDLLGRAGRLDEAL +
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFFSMWNDYGVRPDVKHYTCMVDLLGRAGRLDEALGL 420

Query: 421 IEGMTVEKDEALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKW 480
           IE M VEKDE LWGALLGACRIH+ LDLAERVA SL +L+ QNPGHYVLLSNIYANAGKW
Sbjct: 421 IESMAVEKDEGLWGALLGACRIHQHLDLAERVARSLLELEPQNPGHYVLLSNIYANAGKW 480

Query: 481 DDMAKIRDLMTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELA 540
           ++MAK RDLMTK GL+KIPGWTWIEV+EKLYQF VGDKTHPRSSEIYK+LKR+GEK+ELA
Sbjct: 481 ENMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYKLLKRLGEKIELA 540

Query: 541 GYLPDTNYALHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFC 600
           GY+PDT   LHDVDEEVKQGLLYAHSEKLAI FGLL I Q YPIRITKNLRVCGDCHTFC
Sbjct: 541 GYVPDTKCVLHDVDEEVKQGLLYAHSEKLAITFGLLAIPQNYPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSFIEQRTIIVRDAKRFHHFKEGVCSCRDYW 610
           KFVS +EQRTII+RDA RFHHFKEGVCSCRDYW
Sbjct: 601 KFVSSVEQRTIILRDANRFHHFKEGVCSCRDYW 633

[Close]
BLAST of Cmc04g0116341 vs. NCBI nr
Match: KAG6596581.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1034.6 bits (2674), Expect = 3.3e-298
Identity = 508/633 (80.25%), Postives = 548/633 (86.57%), Query Frame = 0 

Query: 1   MLKSKCQHIFINHGKLRFSS---------ASLSWQFDVNCNSNEPTPCTQESESSHVLHY 60
           MLKSK Q IFIN+GKLRFSS         AS+S QF+VN +SNEP   TQES+SS +L++
Sbjct: 1   MLKSKSQIIFINNGKLRFSSASATTAVKEASISVQFNVNNHSNEPNSSTQESQSSFLLYF 60

Query: 61  DPKRFRNSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGM 120
            PKRF   LLSCRNLFQ+RQVH  IA++GAFRNLA+ANKLLFLY + GALEDA ELFD M
Sbjct: 61  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 120

Query: 121 SKRDPYSWSIIVGG---------------ELLRCGTPLDDYNAPIVIRACRDLKDLKCGR 180
           ++RD YSWS+IVGG               EL+RCG PLD+Y  PIVIRACRDLKDL+ GR
Sbjct: 121 TERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180

Query: 181 LIHCITLKCGLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESG 240
           +IHC T KCGLD+  FVCASLVDMYARCKVIEDARQ+F KM +RDL TWTVM+GALAE  
Sbjct: 181 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 240

Query: 241 VPVESLAFFDRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGT 300
             VESL  FDRMRDEGIVPDKVALVTVVYACAKLGAMNKA+AIH YINGT Y LDVILGT
Sbjct: 241 SAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 300

Query: 301 AMIDMYAKCGSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILP 360
           AMIDMYAKCGSVD AR IFD+MQV+NVITWSAMIAAYGYHGQG KALELFPMML  GILP
Sbjct: 301 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEM 420
           NRITFVSLLYACSHAGLIEEGQRFF+SMWDEYGV PDVKHYTCMVDLLGRAGR DEALE+
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 420

Query: 421 IEGMTVEKDEALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKW 480
           IE MTVEKDE LWGALLGACRIHRRLDLA+RVA+SL +LQ QNPGHYVLLSNIYANAGKW
Sbjct: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 480

Query: 481 DDMAKIRDLMTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELA 540
            DMAK RDLMTKSGL+KIPGWTWIEV+EKLYQF VGDKTHPRSSEIY+MLKR+GEKLELA
Sbjct: 481 KDMAKTRDLMTKSGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 540

Query: 541 GYLPDTNYALHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFC 600
           GY+PDTNY LHDVDEEVKQGLLYAHSEKLAIAFGL+VI    PIRITKNLRVCGDCHTFC
Sbjct: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSFIEQRTIIVRDAKRFHHFKEGVCSCRDYW 610
           KFVS IE+RTII+RDA RFHHFKEG CSCRDYW
Sbjct: 601 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 633

[Close]
BLAST of Cmc04g0116341 vs. NCBI nr
Match: XP_023540820.1 (pentatricopeptide repeat-containing protein At2g33760-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1033.1 bits (2670), Expect = 9.7e-298
Identity = 506/633 (79.94%), Postives = 546/633 (86.26%), Query Frame = 0 

Query: 1   MLKSKCQHIFINHGKLRFSS---------ASLSWQFDVNCNSNEPTPCTQESESSHVLHY 60
           MLKSK Q IFINHGK RFSS         AS+S QF+VN +SNEP   TQES+SS +L++
Sbjct: 1   MLKSKSQIIFINHGKRRFSSASATTPVKEASISSQFNVNNHSNEPNSFTQESQSSFLLYF 60

Query: 61  DPKRFRNSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGM 120
            PKRF   LLSCRNLFQ+RQVH  IA++GAFRNLA+ANKLLFLY + GALEDA ELFD M
Sbjct: 61  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 120

Query: 121 SKRDPYSWSIIVGG---------------ELLRCGTPLDDYNAPIVIRACRDLKDLKCGR 180
           ++RDPYSWS+IVGG               EL+RCG PLD+Y  PIVIRACRDLKDL+ GR
Sbjct: 121 TERDPYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180

Query: 181 LIHCITLKCGLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESG 240
           +IHC T KCGLD+  FVCASLVDMYARCKVIEDARQ+F KM +RDL TWTVM+GALAE  
Sbjct: 181 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 240

Query: 241 VPVESLAFFDRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGT 300
             VESL  FDRMRDEGIVPDKVALVTVVYACAKLGAMNKA+AIH YINGT Y LDVILGT
Sbjct: 241 SAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 300

Query: 301 AMIDMYAKCGSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILP 360
           AMIDMYAKCGSVD AR IFD+MQV+NVITWSAMIAAYGYHGQG KALELFPMML  GILP
Sbjct: 301 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEM 420
           NRITFVSLLYACSHAGLIEEGQRFF+SMWDEYGV PDVKHYTCMVDLLGRAGR DEAL +
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL 420

Query: 421 IEGMTVEKDEALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKW 480
           IE MTVEKDE LWGALLGACRIHRRLDLA+RVA SL ++Q QNPGHYVLLSNIYANAGKW
Sbjct: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVANSLLEIQPQNPGHYVLLSNIYANAGKW 480

Query: 481 DDMAKIRDLMTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELA 540
           +DMAK RDLMTK GL+KIPGWTWIEV+EKLYQF VGDKTHPRSSEIY+MLKR+GEKLELA
Sbjct: 481 EDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 540

Query: 541 GYLPDTNYALHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFC 600
           GY+PDTNY LHDVDEEVKQGLLYAHSEKLAIAFGL+VI    PIRITKNLRVCGDCHTFC
Sbjct: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSFIEQRTIIVRDAKRFHHFKEGVCSCRDYW 610
           KFVS IE+RTII+RDA RFHHFKEG CSCRDYW
Sbjct: 601 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 633

[Close]
BLAST of Cmc04g0116341 vs. ExPASy Swiss-Prot
Match: Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 1.9e-131
Identity = 229/566 (40.46%), Postives = 352/566 (62.19%), Query Frame = 0 

Query: 65  NLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSWSIIV- 124
           +L    +VH  I  NG+ ++  +A KL+ +Y + G+++ A+++FD   KR  Y W+ +  
Sbjct: 92  SLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFR 151

Query: 125 -------GGELL-------RCGTPLDDYNAPIVIRAC----RDLKDLKCGRLIHCITLKC 184
                  G E+L       R G   D +    V++AC      +  L  G+ IH    + 
Sbjct: 152 ALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRR 211

Query: 185 GLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESGVPVESLAFF 244
           G     ++  +LVDMYAR   ++ A  +F  M  R++ +W+ MI   A++G   E+L  F
Sbjct: 212 GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTF 271

Query: 245 DRMRDE--GIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYA 304
             M  E     P+ V +V+V+ ACA L A+ + K IH YI   G    + + +A++ MY 
Sbjct: 272 REMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYG 331

Query: 305 KCGSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVS 364
           +CG ++  + +FDRM  R+V++W+++I++YG HG G+KA+++F  ML  G  P  +TFVS
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391

Query: 365 LLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVE 424
           +L ACSH GL+EEG+R F +MW ++G+ P ++HY CMVDLLGRA RLDEA +M++ M  E
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451

Query: 425 KDEALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIR 484
               +WG+LLG+CRIH  ++LAER +  L  L+ +N G+YVLL++IYA A  WD++ +++
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVK 511

Query: 485 DLMTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTN 544
            L+   GL+K+PG  W+EV  K+Y F   D+ +P   +I+  L ++ E ++  GY+P T 
Sbjct: 512 KLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTK 571

Query: 545 YALHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFCKFVSFIE 604
             L++++ E K+ ++  HSEKLA+AFGL+  S+G PIRITKNLR+C DCH F KF+S   
Sbjct: 572 GVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFM 631

Query: 605 QRTIIVRDAKRFHHFKEGVCSCRDYW 610
           ++ I+VRD  RFH FK GVCSC DYW
Sbjct: 632 EKEILVRDVNRFHRFKNGVCSCGDYW 657

[Close]
BLAST of Cmc04g0116341 vs. ExPASy Swiss-Prot
Match: Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 2.6e-128
Identity = 241/581 (41.48%), Postives = 352/581 (60.59%), Query Frame = 0 

Query: 56  FRNSLLSCRNLFQV---RQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMS 115
           F  ++ +C +LF +   +Q H Q    G   ++ V++ L+ +Y   G LEDA+++FD + 
Sbjct: 79  FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138

Query: 116 KRDPYSWSIIVGGELLRCGTP---------------------LDDYNAPIVIRACRDLKD 175
           KR+  SW+ ++ G  L                          LD      VI AC  +  
Sbjct: 139 KRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPA 198

Query: 176 LKCGRLIHCITLKCGLDYGQFVCASLVDMYARCKV--IEDARQIFVKMWKRDLATWTVMI 235
                 IH   +K G D G  V  +L+D YA+     +  AR+IF ++  +D  ++  ++
Sbjct: 199 KGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIM 258

Query: 236 GALAESGVPVESLAFFDRM-RDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGY 295
              A+SG+  E+   F R+ +++ +  + + L TV+ A +  GA+   K IH  +   G 
Sbjct: 259 SVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGL 318

Query: 296 SLDVILGTAMIDMYAKCGSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPM 355
             DVI+GT++IDMY KCG V++AR  FDRM+ +NV +W+AMIA YG HG   KALELFP 
Sbjct: 319 EDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPA 378

Query: 356 MLGCGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAG 415
           M+  G+ PN ITFVS+L ACSHAGL  EG R+F++M   +GV P ++HY CMVDLLGRAG
Sbjct: 379 MIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAG 438

Query: 416 RLDEALEMIEGMTVEKDEALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSN 475
            L +A ++I+ M ++ D  +W +LL ACRIH+ ++LAE     L +L S N G+Y+LLS+
Sbjct: 439 FLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSH 498

Query: 476 IYANAGKWDDMAKIRDLMTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKR 535
           IYA+AG+W D+ ++R +M   GL K PG++ +E+N +++ F +GD+ HP+  +IY+ L  
Sbjct: 499 IYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAE 558

Query: 536 IGEKLELAGYLPDTNYALHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRV 595
           +  KL  AGY+ +T+   HDVDEE K+  L  HSEKLAIAFG++    G  + + KNLRV
Sbjct: 559 LNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRV 618

Query: 596 CGDCHTFCKFVSFIEQRTIIVRDAKRFHHFKEGVCSCRDYW 610
           C DCH   K +S I  R  +VRDAKRFHHFK+G CSC DYW
Sbjct: 619 CSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659

[Close]
BLAST of Cmc04g0116341 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 4.4e-128
Identity = 228/555 (41.08%), Postives = 341/555 (61.44%), Query Frame = 0 

Query: 70  RQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSW---------- 129
           +++H     +G    + ++  L+ +Y + G+LE A++LFDGM +R+  SW          
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315

Query: 130 -----SIIVGGELLRCGTPLDDYNAPIVIRACRDLKDLKCGRLIHCITLKCGLDYGQFVC 189
                ++++  ++L  G    D +    + AC DL DL+ GR IH ++++ GLD    V 
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375

Query: 190 ASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESGVPVESLAFFDRMRDEGIV 249
            SL+ MY +CK ++ A  +F K+  R L +W  MI   A++G P+++L +F +MR   + 
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435

Query: 250 PDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVDSARWI 309
           PD    V+V+ A A+L   + AK IH  +  +    +V + TA++DMYAKCG++  AR I
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495

Query: 310 FDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVSLLYACSHAGLI 369
           FD M  R+V TW+AMI  YG HG G+ ALELF  M    I PN +TF+S++ ACSH+GL+
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555

Query: 370 EEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVEKDEALWGALLG 429
           E G + F  M + Y +   + HY  MVDLLGRAGRL+EA + I  M V+    ++GA+LG
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615

Query: 430 ACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIRDLMTKSGLRKI 489
           AC+IH+ ++ AE+ A  L +L   + G++VLL+NIY  A  W+ + ++R  M + GLRK 
Sbjct: 616 ACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675

Query: 490 PGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTNYALHDVDEEVK 549
           PG + +E+  +++ F  G   HP S +IY  L+++   ++ AGY+PDTN  L  V+ +VK
Sbjct: 676 PGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVK 735

Query: 550 QGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFCKFVSFIEQRTIIVRDAKR 609
           + LL  HSEKLAI+FGLL  + G  I + KNLRVC DCH   K++S +  R I+VRD +R
Sbjct: 736 EQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQR 795

[Close]
BLAST of Cmc04g0116341 vs. ExPASy Swiss-Prot
Match: Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 2.2e-127
Identity = 231/602 (38.37%), Postives = 342/602 (56.81%), Query Frame = 0 

Query: 70  RQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSWSIIVGG---- 129
           +Q+H    T+   +N+ V N L+ +Y + G +++A  +F  MS +D  SW+ +V G    
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308

Query: 130 ----------------------------------------------ELLRCGTPLDDYNA 189
                                                         ++L  G   ++   
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368

Query: 190 PIVIRACRDLKDLKCGRLIHCITLKCGLDYGQ-------FVCASLVDMYARCKVIEDARQ 249
             V+  C  +  L  G+ IHC  +K  +D  +        V   L+DMYA+CK ++ AR 
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428

Query: 250 IF--VKMWKRDLATWTVMIGALAESGVPVESLAFFDRMRDEGIV--PDKVALVTVVYACA 309
           +F  +   +RD+ TWTVMIG  ++ G   ++L     M +E     P+   +   + ACA
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488

Query: 310 KLGAMNKAKAIHAY-INGTGYSLDVILGTAMIDMYAKCGSVDSARWIFDRMQVRNVITWS 369
            L A+   K IHAY +     ++ + +   +IDMYAKCGS+  AR +FD M  +N +TW+
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWT 548

Query: 370 AMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDE 429
           +++  YG HG GE+AL +F  M   G   + +T + +LYACSH+G+I++G  +F+ M   
Sbjct: 549 SLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTV 608

Query: 430 YGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVEKDEALWGALLGACRIHRRLDLAER 489
           +GV+P  +HY C+VDLLGRAGRL+ AL +IE M +E    +W A L  CRIH +++L E 
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEY 668

Query: 490 VATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIRDLMTKSGLRKIPGWTWIEVNEKLY 549
            A  + +L S + G Y LLSN+YANAG+W D+ +IR LM   G++K PG +W+E  +   
Sbjct: 669 AAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTT 728

Query: 550 QFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTNYALHDVDEEVKQGLLYAHSEKLAI 609
            F VGDKTHP + EIY++L    ++++  GY+P+T +ALHDVD+E K  LL+ HSEKLA+
Sbjct: 729 TFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLAL 788

[Close]
BLAST of Cmc04g0116341 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 3.7e-127
Identity = 233/579 (40.24%), Postives = 353/579 (60.97%), Query Frame = 0 

Query: 52  DPKRFRNSLLSCRNLFQV---RQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELF 111
           D   F + L +C  L  +   R VHAQ+   G   ++ V N L+ LY +   L  A+ +F
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177

Query: 112 DG--MSKRDPYSWSIIVGGELLRCGTPLD---------------DYNAPI-VIRACRDLK 171
           +G  + +R   SW+ IV     + G P++               D+ A + V+ A   L+
Sbjct: 178 EGLPLPERTIVSWTAIVSA-YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ 237

Query: 172 DLKCGRLIHCITLKCGLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIG 231
           DLK GR IH   +K GL+    +  SL  MYA+C  +  A+ +F KM   +L  W  MI 
Sbjct: 238 DLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMIS 297

Query: 232 ALAESGVPVESLAFFDRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSL 291
             A++G   E++  F  M ++ + PD +++ + + ACA++G++ +A++++ Y+  + Y  
Sbjct: 298 GYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 357

Query: 292 DVILGTAMIDMYAKCGSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMML 351
           DV + +A+IDM+AKCGSV+ AR +FDR   R+V+ WSAMI  YG HG+  +A+ L+  M 
Sbjct: 358 DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME 417

Query: 352 GCGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRL 411
             G+ PN +TF+ LL AC+H+G++ EG  FF+ M D + + P  +HY C++DLLGRAG L
Sbjct: 418 RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHL 477

Query: 412 DEALEMIEGMTVEKDEALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIY 471
           D+A E+I+ M V+    +WGALL AC+ HR ++L E  A  L  +   N GHYV LSN+Y
Sbjct: 478 DQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLY 537

Query: 472 ANAGKWDDMAKIRDLMTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIG 531
           A A  WD +A++R  M + GL K  G +W+EV  +L  F VGDK+HPR  EI + ++ I 
Sbjct: 538 AAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIE 597

Query: 532 EKLELAGYLPDTNYALHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCG 591
            +L+  G++ + + +LHD+++E  +  L +HSE++AIA+GL+   QG P+RITKNLR C 
Sbjct: 598 SRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACV 657

Query: 592 DCHTFCKFVSFIEQRTIIVRDAKRFHHFKEGVCSCRDYW 610
           +CH   K +S +  R I+VRD  RFHHFK+GVCSC DYW
Sbjct: 658 NCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694

[Close]
BLAST of Cmc04g0116341 vs. ExPASy TrEMBL
Match: A0A5D3DNV6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004080 PE=3 SV=1)

HSP 1 Score: 1258.0 bits (3254), Expect = 0.0e+00
Identity = 609/624 (97.60%), Postives = 609/624 (97.60%), Query Frame = 0 

Query: 1   MLKSKCQHIFINHGKLRFSSASLSWQFDVNCNSNEPTPCTQESESSHVLHYDPKRFRNSL 60
           MLKSKCQHIFINHGKLRFSSASLSWQFDVNCNSNEPTPCTQESESSHVLHYDPKRFRNSL
Sbjct: 1   MLKSKCQHIFINHGKLRFSSASLSWQFDVNCNSNEPTPCTQESESSHVLHYDPKRFRNSL 60

Query: 61  LSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSWS 120
           LSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSWS
Sbjct: 61  LSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSWS 120

Query: 121 IIVGG---------------ELLRCGTPLDDYNAPIVIRACRDLKDLKCGRLIHCITLKC 180
           IIVGG               ELLRCGTPLDDYNAPIVIRACRDLKDLKCGRLIHCITLKC
Sbjct: 121 IIVGGYAKVGDFFSCFWMFRELLRCGTPLDDYNAPIVIRACRDLKDLKCGRLIHCITLKC 180

Query: 181 GLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESGVPVESLAFF 240
           GLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESGVPVESLAFF
Sbjct: 181 GLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESGVPVESLAFF 240

Query: 241 DRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC 300
           DRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC
Sbjct: 241 DRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC 300

Query: 301 GSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVSLL 360
           GSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVSLL
Sbjct: 301 GSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVSLL 360

Query: 361 YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVEKD 420
           YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVEKD
Sbjct: 361 YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVEKD 420

Query: 421 EALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIRDL 480
           EALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIRDL
Sbjct: 421 EALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIRDL 480

Query: 481 MTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTNYA 540
           MTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTNYA
Sbjct: 481 MTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTNYA 540

Query: 541 LHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFCKFVSFIEQR 600
           LHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFCKFVSFIEQR
Sbjct: 541 LHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFCKFVSFIEQR 600

Query: 601 TIIVRDAKRFHHFKEGVCSCRDYW 610
           TIIVRDAKRFHHFKEGVCSCRDYW
Sbjct: 601 TIIVRDAKRFHHFKEGVCSCRDYW 624

[Close]
BLAST of Cmc04g0116341 vs. ExPASy TrEMBL
Match: A0A1S3B7F2 (pentatricopeptide repeat-containing protein At2g33760-like OS=Cucumis melo OX=3656 GN=LOC103486628 PE=3 SV=1)

HSP 1 Score: 1258.0 bits (3254), Expect = 0.0e+00
Identity = 609/624 (97.60%), Postives = 609/624 (97.60%), Query Frame = 0 

Query: 1   MLKSKCQHIFINHGKLRFSSASLSWQFDVNCNSNEPTPCTQESESSHVLHYDPKRFRNSL 60
           MLKSKCQHIFINHGKLRFSSASLSWQFDVNCNSNEPTPCTQESESSHVLHYDPKRFRNSL
Sbjct: 1   MLKSKCQHIFINHGKLRFSSASLSWQFDVNCNSNEPTPCTQESESSHVLHYDPKRFRNSL 60

Query: 61  LSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSWS 120
           LSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSWS
Sbjct: 61  LSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSWS 120

Query: 121 IIVGG---------------ELLRCGTPLDDYNAPIVIRACRDLKDLKCGRLIHCITLKC 180
           IIVGG               ELLRCGTPLDDYNAPIVIRACRDLKDLKCGRLIHCITLKC
Sbjct: 121 IIVGGYAKVGDFFSCFWMFRELLRCGTPLDDYNAPIVIRACRDLKDLKCGRLIHCITLKC 180

Query: 181 GLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESGVPVESLAFF 240
           GLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESGVPVESLAFF
Sbjct: 181 GLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESGVPVESLAFF 240

Query: 241 DRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC 300
           DRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC
Sbjct: 241 DRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC 300

Query: 301 GSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVSLL 360
           GSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVSLL
Sbjct: 301 GSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVSLL 360

Query: 361 YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVEKD 420
           YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVEKD
Sbjct: 361 YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVEKD 420

Query: 421 EALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIRDL 480
           EALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIRDL
Sbjct: 421 EALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIRDL 480

Query: 481 MTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTNYA 540
           MTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTNYA
Sbjct: 481 MTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTNYA 540

Query: 541 LHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFCKFVSFIEQR 600
           LHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFCKFVSFIEQR
Sbjct: 541 LHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFCKFVSFIEQR 600

Query: 601 TIIVRDAKRFHHFKEGVCSCRDYW 610
           TIIVRDAKRFHHFKEGVCSCRDYW
Sbjct: 601 TIIVRDAKRFHHFKEGVCSCRDYW 624

[Close]
BLAST of Cmc04g0116341 vs. ExPASy TrEMBL
Match: A0A0A0LE23 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G777570 PE=3 SV=1)

HSP 1 Score: 1163.7 bits (3009), Expect = 0.0e+00
Identity = 561/624 (89.90%), Postives = 583/624 (93.43%), Query Frame = 0 

Query: 1   MLKSKCQHIFINHGKLRFSSASLSWQFDVNCNSNEPTPCTQESESSHVLHYDPKRFRNSL 60
           MLKSKC HIFIN+GKLRFSSASLSWQFDVNCNSNEPTPC+QESE SHVLHYD KRFR+SL
Sbjct: 1   MLKSKCHHIFINYGKLRFSSASLSWQFDVNCNSNEPTPCSQESECSHVLHYDTKRFRSSL 60

Query: 61  LSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSWS 120
           LSCRNLFQVRQVHAQIATNGAFRNLAVANKLL++YVERGALEDAQELFDGMSKR PYSWS
Sbjct: 61  LSCRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWS 120

Query: 121 IIVGG---------------ELLRCGTPLDDYNAPIVIRACRDLKDLKCGRLIHCITLKC 180
           +IVGG               ELLR G PLDDY+AP+VIRACRDLKDLKCGRLIHCITLKC
Sbjct: 121 VIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKC 180

Query: 181 GLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESGVPVESLAFF 240
           GLDYG FVCA+LVDMYARCKV+EDA QIFVKMWKRDLATWTVMIGALAESGVPVESL FF
Sbjct: 181 GLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFF 240

Query: 241 DRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC 300
           DRMR++GIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC
Sbjct: 241 DRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC 300

Query: 301 GSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVSLL 360
           GSV+SARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMML  GILPNRITFVSLL
Sbjct: 301 GSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLL 360

Query: 361 YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVEKD 420
           YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGM VEKD
Sbjct: 361 YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKD 420

Query: 421 EALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIRDL 480
           E LWGALLGACRIHR LDLAERVA SL KLQSQ PGHYVLLSNIYANAGKW+DMAK RDL
Sbjct: 421 EVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDL 480

Query: 481 MTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTNYA 540
           MTK GLRKIPG TWIEV EKLYQFGVGDKTHPRS+EIYKMLKR+GEKLE+AGY PDTN  
Sbjct: 481 MTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDV 540

Query: 541 LHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFCKFVSFIEQR 600
           L+DVDEEVKQGLLY+HSEKLAIAFGLLV+ QG+PIRITKNLRVCGDCHTFCKFVS IEQ+
Sbjct: 541 LYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQK 600

Query: 601 TIIVRDAKRFHHFKEGVCSCRDYW 610
           TIIVRDAKRFHHFKEGVCSCRDYW
Sbjct: 601 TIIVRDAKRFHHFKEGVCSCRDYW 624

[Close]
BLAST of Cmc04g0116341 vs. ExPASy TrEMBL
Match: A0A6J1FK20 (pentatricopeptide repeat-containing protein At2g33760-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444929 PE=3 SV=1)

HSP 1 Score: 1032.7 bits (2669), Expect = 6.1e-298
Identity = 507/633 (80.09%), Postives = 547/633 (86.41%), Query Frame = 0 

Query: 1   MLKSKCQHIFINHGKLRFSS---------ASLSWQFDVNCNSNEPTPCTQESESSHVLHY 60
           MLKSK Q IFIN+GKLRFSS         AS+S QF+VN +SNEP   TQES+SS +L++
Sbjct: 1   MLKSKSQIIFINNGKLRFSSASATTAVKEASISVQFNVNNHSNEPNSSTQESQSSFLLYF 60

Query: 61  DPKRFRNSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGM 120
            PKRF   LLSCRNLFQ+RQVH  IA++GAFRNLA+ANKLLFLY + GALEDA ELFD M
Sbjct: 61  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 120

Query: 121 SKRDPYSWSIIVGG---------------ELLRCGTPLDDYNAPIVIRACRDLKDLKCGR 180
           ++RD YSWS+IVGG               EL+RCG PLD+Y  PIVIRACRDLKDL+ GR
Sbjct: 121 TERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180

Query: 181 LIHCITLKCGLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESG 240
           +IHC T KCGLD+  FVCASLVDMYARCKVIEDARQ+F KM +RDL TWTVM+GALAE  
Sbjct: 181 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 240

Query: 241 VPVESLAFFDRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGT 300
             VESL  FDRMRDEGIVPDKVALVTVVYACAKLGAMNKA+AIH YINGT Y LDVILGT
Sbjct: 241 SAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 300

Query: 301 AMIDMYAKCGSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILP 360
           AMIDMYAKCGSVD AR IFD+MQV+NVITWSAMIAAYGYHGQG KALELFPMML  GILP
Sbjct: 301 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEM 420
           NRITFVSLLYACSHAGLIEEGQRFF+SMWDEYGV PDVKHYTCMVDLLGRAGR DEALE+
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 420

Query: 421 IEGMTVEKDEALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKW 480
           IE MTVEKDE LWGALLGACRIHRRLDLA+RVA+SL +LQ QNPGHYVLLSNIYANAGKW
Sbjct: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 480

Query: 481 DDMAKIRDLMTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELA 540
            DMAK RDLMTK GL+KIPGWTWIEV+EKLYQF VGDKTHPRSSEIY+MLKR+GEKLELA
Sbjct: 481 KDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 540

Query: 541 GYLPDTNYALHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFC 600
           GY+PDTNY LHDVDEEVKQGLLYAHSEKLAIAFGL+VI    PIRITKNLRVCGDCHTFC
Sbjct: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSFIEQRTIIVRDAKRFHHFKEGVCSCRDYW 610
           KFVS IE+RTII+RDA RFHHFKEG CSCRDYW
Sbjct: 601 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 633

[Close]
BLAST of Cmc04g0116341 vs. ExPASy TrEMBL
Match: A0A6J1KYT5 (pentatricopeptide repeat-containing protein At2g33760-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498794 PE=3 SV=1)

HSP 1 Score: 1025.4 bits (2650), Expect = 9.7e-296
Identity = 503/633 (79.46%), Postives = 546/633 (86.26%), Query Frame = 0 

Query: 1   MLKSKCQHIFINHGKLRFSS---------ASLSWQFDVNCNSNEPTPCTQESESSHVLHY 60
           MLKSK Q+IFINHGKLRFSS         AS+S QF+VN +SNEP   TQES+SS +L++
Sbjct: 1   MLKSKRQNIFINHGKLRFSSASATTPVKEASISSQFNVNNHSNEPNSSTQESQSSFLLYF 60

Query: 61  DPKRFRNSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGM 120
            PKRF   LLSCRNLFQ+RQVH  IA++GAFRNLA+ANKLLFLY + GALEDA ELFD M
Sbjct: 61  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 120

Query: 121 SKRDPYSWSIIVGG---------------ELLRCGTPLDDYNAPIVIRACRDLKDLKCGR 180
           ++RDPYSWS+IVGG               EL+RCG PLD+Y  PIVIRACRDLKDL+ GR
Sbjct: 121 TERDPYSWSVIVGGYAKVKDFSSCFSMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180

Query: 181 LIHCITLKCGLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESG 240
           +IHC T KCGLD+  FVCASLVDMYARCKVIEDARQ+F KM +RDL TWTVM+GALAE  
Sbjct: 181 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 240

Query: 241 VPVESLAFFDRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGT 300
             VESL  FDRMR EGIVPDKVALVTVVYACAKLGAMNKA+AIH YINGT + LDVILGT
Sbjct: 241 SAVESLTLFDRMRVEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFCLDVILGT 300

Query: 301 AMIDMYAKCGSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILP 360
           AMIDMYAKCGSVD AR IFD+MQ++NVITWSAMIAAYGYHGQG KAL+LFPMML  GILP
Sbjct: 301 AMIDMYAKCGSVDLAREIFDQMQMKNVITWSAMIAAYGYHGQGGKALKLFPMMLSSGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEM 420
           NRITFVSLLYACSHAGLIEEGQRFF+SMWDEYGV PDVKHYTCMVDLLGRAGR DEAL +
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL 420

Query: 421 IEGMTVEKDEALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKW 480
           IE MTVEKDE LWGALLGACRIHRRLDLA+RVA+SL +LQ QNPGHYVLLSNIYANAGKW
Sbjct: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 480

Query: 481 DDMAKIRDLMTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELA 540
           +DMAK RDLMTK GL+KIPGWTWIEV+EKLYQF VGDKTHPRSSEIY MLKR+ EKLELA
Sbjct: 481 EDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYVMLKRVDEKLELA 540

Query: 541 GYLPDTNYALHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFC 600
           GY+PDTNY LHDVDEEVKQGLLYAHSEKLAIAFGL+VI    PIRITKNLRVCGDCHTFC
Sbjct: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSFIEQRTIIVRDAKRFHHFKEGVCSCRDYW 610
           KFVS IE+RTII+RDA RFHHFKEG CSCRDYW
Sbjct: 601 KFVSSIERRTIILRDANRFHHFKEGGCSCRDYW 633

[Close]
BLAST of Cmc04g0116341 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 471.1 bits (1211), Expect = 1.4e-132
Identity = 229/566 (40.46%), Postives = 352/566 (62.19%), Query Frame = 0 

Query: 65  NLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSWSIIV- 124
           +L    +VH  I  NG+ ++  +A KL+ +Y + G+++ A+++FD   KR  Y W+ +  
Sbjct: 92  SLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFR 151

Query: 125 -------GGELL-------RCGTPLDDYNAPIVIRAC----RDLKDLKCGRLIHCITLKC 184
                  G E+L       R G   D +    V++AC      +  L  G+ IH    + 
Sbjct: 152 ALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRR 211

Query: 185 GLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESGVPVESLAFF 244
           G     ++  +LVDMYAR   ++ A  +F  M  R++ +W+ MI   A++G   E+L  F
Sbjct: 212 GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTF 271

Query: 245 DRMRDE--GIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYA 304
             M  E     P+ V +V+V+ ACA L A+ + K IH YI   G    + + +A++ MY 
Sbjct: 272 REMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYG 331

Query: 305 KCGSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVS 364
           +CG ++  + +FDRM  R+V++W+++I++YG HG G+KA+++F  ML  G  P  +TFVS
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391

Query: 365 LLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVE 424
           +L ACSH GL+EEG+R F +MW ++G+ P ++HY CMVDLLGRA RLDEA +M++ M  E
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451

Query: 425 KDEALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIR 484
               +WG+LLG+CRIH  ++LAER +  L  L+ +N G+YVLL++IYA A  WD++ +++
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVK 511

Query: 485 DLMTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTN 544
            L+   GL+K+PG  W+EV  K+Y F   D+ +P   +I+  L ++ E ++  GY+P T 
Sbjct: 512 KLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTK 571

Query: 545 YALHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFCKFVSFIE 604
             L++++ E K+ ++  HSEKLA+AFGL+  S+G PIRITKNLR+C DCH F KF+S   
Sbjct: 572 GVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFM 631

Query: 605 QRTIIVRDAKRFHHFKEGVCSCRDYW 610
           ++ I+VRD  RFH FK GVCSC DYW
Sbjct: 632 EKEILVRDVNRFHRFKNGVCSCGDYW 657

[Close]
BLAST of Cmc04g0116341 vs. TAIR 10
Match: AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 460.7 bits (1184), Expect = 1.8e-129
Identity = 241/581 (41.48%), Postives = 352/581 (60.59%), Query Frame = 0 

Query: 56  FRNSLLSCRNLFQV---RQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMS 115
           F  ++ +C +LF +   +Q H Q    G   ++ V++ L+ +Y   G LEDA+++FD + 
Sbjct: 79  FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138

Query: 116 KRDPYSWSIIVGGELLRCGTP---------------------LDDYNAPIVIRACRDLKD 175
           KR+  SW+ ++ G  L                          LD      VI AC  +  
Sbjct: 139 KRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPA 198

Query: 176 LKCGRLIHCITLKCGLDYGQFVCASLVDMYARCKV--IEDARQIFVKMWKRDLATWTVMI 235
                 IH   +K G D G  V  +L+D YA+     +  AR+IF ++  +D  ++  ++
Sbjct: 199 KGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIM 258

Query: 236 GALAESGVPVESLAFFDRM-RDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGY 295
              A+SG+  E+   F R+ +++ +  + + L TV+ A +  GA+   K IH  +   G 
Sbjct: 259 SVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGL 318

Query: 296 SLDVILGTAMIDMYAKCGSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPM 355
             DVI+GT++IDMY KCG V++AR  FDRM+ +NV +W+AMIA YG HG   KALELFP 
Sbjct: 319 EDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPA 378

Query: 356 MLGCGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAG 415
           M+  G+ PN ITFVS+L ACSHAGL  EG R+F++M   +GV P ++HY CMVDLLGRAG
Sbjct: 379 MIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAG 438

Query: 416 RLDEALEMIEGMTVEKDEALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSN 475
            L +A ++I+ M ++ D  +W +LL ACRIH+ ++LAE     L +L S N G+Y+LLS+
Sbjct: 439 FLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSH 498

Query: 476 IYANAGKWDDMAKIRDLMTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKR 535
           IYA+AG+W D+ ++R +M   GL K PG++ +E+N +++ F +GD+ HP+  +IY+ L  
Sbjct: 499 IYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAE 558

Query: 536 IGEKLELAGYLPDTNYALHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRV 595
           +  KL  AGY+ +T+   HDVDEE K+  L  HSEKLAIAFG++    G  + + KNLRV
Sbjct: 559 LNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRV 618

Query: 596 CGDCHTFCKFVSFIEQRTIIVRDAKRFHHFKEGVCSCRDYW 610
           C DCH   K +S I  R  +VRDAKRFHHFK+G CSC DYW
Sbjct: 619 CSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659

[Close]
BLAST of Cmc04g0116341 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 459.9 bits (1182), Expect = 3.1e-129
Identity = 228/555 (41.08%), Postives = 341/555 (61.44%), Query Frame = 0 

Query: 70  RQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSW---------- 129
           +++H     +G    + ++  L+ +Y + G+LE A++LFDGM +R+  SW          
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315

Query: 130 -----SIIVGGELLRCGTPLDDYNAPIVIRACRDLKDLKCGRLIHCITLKCGLDYGQFVC 189
                ++++  ++L  G    D +    + AC DL DL+ GR IH ++++ GLD    V 
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375

Query: 190 ASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESGVPVESLAFFDRMRDEGIV 249
            SL+ MY +CK ++ A  +F K+  R L +W  MI   A++G P+++L +F +MR   + 
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435

Query: 250 PDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVDSARWI 309
           PD    V+V+ A A+L   + AK IH  +  +    +V + TA++DMYAKCG++  AR I
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495

Query: 310 FDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVSLLYACSHAGLI 369
           FD M  R+V TW+AMI  YG HG G+ ALELF  M    I PN +TF+S++ ACSH+GL+
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555

Query: 370 EEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVEKDEALWGALLG 429
           E G + F  M + Y +   + HY  MVDLLGRAGRL+EA + I  M V+    ++GA+LG
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615

Query: 430 ACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIRDLMTKSGLRKI 489
           AC+IH+ ++ AE+ A  L +L   + G++VLL+NIY  A  W+ + ++R  M + GLRK 
Sbjct: 616 ACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675

Query: 490 PGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTNYALHDVDEEVK 549
           PG + +E+  +++ F  G   HP S +IY  L+++   ++ AGY+PDTN  L  V+ +VK
Sbjct: 676 PGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVK 735

Query: 550 QGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFCKFVSFIEQRTIIVRDAKR 609
           + LL  HSEKLAI+FGLL  + G  I + KNLRVC DCH   K++S +  R I+VRD +R
Sbjct: 736 EQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQR 795

[Close]
BLAST of Cmc04g0116341 vs. TAIR 10
Match: AT5G16860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 457.6 bits (1176), Expect = 1.6e-128
Identity = 231/602 (38.37%), Postives = 342/602 (56.81%), Query Frame = 0 

Query: 70  RQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGMSKRDPYSWSIIVGG---- 129
           +Q+H    T+   +N+ V N L+ +Y + G +++A  +F  MS +D  SW+ +V G    
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308

Query: 130 ----------------------------------------------ELLRCGTPLDDYNA 189
                                                         ++L  G   ++   
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368

Query: 190 PIVIRACRDLKDLKCGRLIHCITLKCGLDYGQ-------FVCASLVDMYARCKVIEDARQ 249
             V+  C  +  L  G+ IHC  +K  +D  +        V   L+DMYA+CK ++ AR 
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428

Query: 250 IF--VKMWKRDLATWTVMIGALAESGVPVESLAFFDRMRDEGIV--PDKVALVTVVYACA 309
           +F  +   +RD+ TWTVMIG  ++ G   ++L     M +E     P+   +   + ACA
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488

Query: 310 KLGAMNKAKAIHAY-INGTGYSLDVILGTAMIDMYAKCGSVDSARWIFDRMQVRNVITWS 369
            L A+   K IHAY +     ++ + +   +IDMYAKCGS+  AR +FD M  +N +TW+
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWT 548

Query: 370 AMIAAYGYHGQGEKALELFPMMLGCGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDE 429
           +++  YG HG GE+AL +F  M   G   + +T + +LYACSH+G+I++G  +F+ M   
Sbjct: 549 SLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTV 608

Query: 430 YGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMTVEKDEALWGALLGACRIHRRLDLAER 489
           +GV+P  +HY C+VDLLGRAGRL+ AL +IE M +E    +W A L  CRIH +++L E 
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEY 668

Query: 490 VATSLHKLQSQNPGHYVLLSNIYANAGKWDDMAKIRDLMTKSGLRKIPGWTWIEVNEKLY 549
            A  + +L S + G Y LLSN+YANAG+W D+ +IR LM   G++K PG +W+E  +   
Sbjct: 669 AAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTT 728

Query: 550 QFGVGDKTHPRSSEIYKMLKRIGEKLELAGYLPDTNYALHDVDEEVKQGLLYAHSEKLAI 609
            F VGDKTHP + EIY++L    ++++  GY+P+T +ALHDVD+E K  LL+ HSEKLA+
Sbjct: 729 TFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLAL 788

[Close]
BLAST of Cmc04g0116341 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 456.8 bits (1174), Expect = 2.7e-128
Identity = 233/579 (40.24%), Postives = 353/579 (60.97%), Query Frame = 0 

Query: 52  DPKRFRNSLLSCRNLFQV---RQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELF 111
           D   F + L +C  L  +   R VHAQ+   G   ++ V N L+ LY +   L  A+ +F
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177

Query: 112 DG--MSKRDPYSWSIIVGGELLRCGTPLD---------------DYNAPI-VIRACRDLK 171
           +G  + +R   SW+ IV     + G P++               D+ A + V+ A   L+
Sbjct: 178 EGLPLPERTIVSWTAIVSA-YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ 237

Query: 172 DLKCGRLIHCITLKCGLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIG 231
           DLK GR IH   +K GL+    +  SL  MYA+C  +  A+ +F KM   +L  W  MI 
Sbjct: 238 DLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMIS 297

Query: 232 ALAESGVPVESLAFFDRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSL 291
             A++G   E++  F  M ++ + PD +++ + + ACA++G++ +A++++ Y+  + Y  
Sbjct: 298 GYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 357

Query: 292 DVILGTAMIDMYAKCGSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMML 351
           DV + +A+IDM+AKCGSV+ AR +FDR   R+V+ WSAMI  YG HG+  +A+ L+  M 
Sbjct: 358 DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME 417

Query: 352 GCGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRL 411
             G+ PN +TF+ LL AC+H+G++ EG  FF+ M D + + P  +HY C++DLLGRAG L
Sbjct: 418 RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHL 477

Query: 412 DEALEMIEGMTVEKDEALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIY 471
           D+A E+I+ M V+    +WGALL AC+ HR ++L E  A  L  +   N GHYV LSN+Y
Sbjct: 478 DQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLY 537

Query: 472 ANAGKWDDMAKIRDLMTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIG 531
           A A  WD +A++R  M + GL K  G +W+EV  +L  F VGDK+HPR  EI + ++ I 
Sbjct: 538 AAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIE 597

Query: 532 EKLELAGYLPDTNYALHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCG 591
            +L+  G++ + + +LHD+++E  +  L +HSE++AIA+GL+   QG P+RITKNLR C 
Sbjct: 598 SRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACV 657

Query: 592 DCHTFCKFVSFIEQRTIIVRDAKRFHHFKEGVCSCRDYW 610
           +CH   K +S +  R I+VRD  RFHHFK+GVCSC DYW
Sbjct: 658 NCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694

The following BLAST results are available for this feature:
BLAST of Cmc04g0116341 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008442861.10.0e+0097.60PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Cucumis m... [more]
XP_004149219.10.0e+0089.90pentatricopeptide repeat-containing protein At4g21065 [Cucumis sativus] >KGN5914... [more]
XP_038903368.13.4e-30381.36pentatricopeptide repeat-containing protein At2g33760-like [Benincasa hispida][more]
KAG6596581.13.3e-29880.25Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_023540820.19.7e-29879.94pentatricopeptide repeat-containing protein At2g33760-like isoform X1 [Cucurbita... [more]
BLAST of Cmc04g0116341 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9STF31.9e-13140.46Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... [more]
Q9LW322.6e-12841.48Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop... [more]
Q3E6Q14.4e-12841.08Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
Q9LFL52.2e-12738.37Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX... [more]
Q9LTV83.7e-12740.24Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
BLAST of Cmc04g0116341 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DNV60.0e+0097.60Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B7F20.0e+0097.60pentatricopeptide repeat-containing protein At2g33760-like OS=Cucumis melo OX=36... [more]
A0A0A0LE230.0e+0089.90DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G7775... [more]
A0A6J1FK206.1e-29880.09pentatricopeptide repeat-containing protein At2g33760-like isoform X1 OS=Cucurbi... [more]
A0A6J1KYT59.7e-29679.46pentatricopeptide repeat-containing protein At2g33760-like isoform X1 OS=Cucurbi... [more]
BLAST of Cmc04g0116341 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G46790.11.4e-13240.46Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G26782.11.8e-12941.48Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G11290.13.1e-12941.08Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G16860.11.6e-12838.37Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G12770.12.7e-12840.24mitochondrial editing factor 22 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 366..535
e-value: 1.4E-14
score: 56.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 136..262
e-value: 6.2E-19
score: 70.0
coord: 38..135
e-value: 3.6E-5
score: 25.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 264..365
e-value: 1.0E-15
score: 59.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 176..201
e-value: 0.7
score: 10.3
coord: 204..233
e-value: 2.0E-4
score: 21.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 301..349
e-value: 9.0E-9
score: 35.4
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 369..400
e-value: 7.7E-7
score: 28.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 304..337
e-value: 2.3E-5
score: 22.3
coord: 377..401
e-value: 1.5E-4
score: 19.7
coord: 204..236
e-value: 1.2E-6
score: 26.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 302..336
score: 11.191545
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 337..372
score: 8.604678
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 201..235
score: 11.531345
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 373..407
score: 9.108898
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 475..599
e-value: 2.0E-40
score: 137.6
NoneNo IPR availablePANTHERPTHR47928:SF52TRANSCRIPT PROCESSING PROTEIN, PUTATIVE-RELATEDcoord: 1..582
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 1..582

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0116341.1Cmc04g0116341.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding