Cmc04g0116011 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATTGATCAAAAGAATAAAAATTAAAAATGTTGGGAGATTTCTTAGTTCGATTTCTTCTGTGAGTTCATCAAATATGTTTGGTATTTGTATTTGGTTGAATTTGTTGGTGTGTGGTTAATGAATTATTATTATTATTGATGATGAATTTTGAAACACAGGATGATATTTGGGTATTGTTATCCAGCTTTTCAATGCTACAAGGTGGTGGTGAAATCCCCAATTCAGGTTCAAGAGCTTCTATATTGGTGCCAATTTTGGTAACAAAACAATATATTATATTAATTCAAATCCAGTGAATAATAATGTTTTTATTTTTGGGTTTATGATTATGAAATATGTTGGCGTATAGGATTATTGTGGCAATTTTAACAGTTGTTGAGAGGATTGCTGATGTTTTTGTGGGATGGTTCCCCATGTATGGAGAATTGAAGTTGGCTCTCTTTATCTATTTGTGGTATCCAAAGACTATGGTAACAATAACTTTCAATTTATCAAGTTTTCGTTTTAAAGATATTAAGTATTTGTAATGAAAATAAAAATTTAGGCAATGGTTCATACTCTCGCATGCTCACCCGAATTGATTGCCCATGGTGTGTTGCATAAGTCAAGTAAAGATGTCTTTTTTTTTTCTCTCTCTCTCTAGGGGAGTAGAGGTTATGAGGTGAGATTTTGAGTGGGTTATCATTTTTGTATTGGGTAAATGTGCTTTTCTCTCTGCTTTGCATGAGTTGCTGTCCATTTTCATATGATATTTTAAGGAAGTAAAATAATGAGACAATTTGTAAAGTGTGTTGTTGATTGGGATGTAGAATAACAAAGATATAAAAAAAAAAAAAAAATGCAGGGATCAGGGTATGTATTCGACCAGTTGTTGAGGCCCTTGGTTGATAGTAACGACAAAGATATCGAAAAGATGTTGTTAGATTTGAGAGTAAAAGCTTGGGATTTGGCTATTTTCTACTGGAACAATTGTACTGAGTTGAGCCAATCTGCATTTGTCAGAGTTGTTAACTACATCGCTGCTCAAAGTAACAACCTTGGTTCTACATCTTCACCTCCATCTAAGAAGGAAATGTGAACCTTTTTTTTATCACATCAATTATGGGGTTGGTGGGGGAAGCCTATGTTCGTCGTCATTGAGCTTAACCTACCAAATCTTTGACAATGAAAGTAATCTCTATTCTTATTTTTAATACAAATTAAGAAGGTAGGAATTTGAATTTGAAACCTCTTAGTTTTTAAAACTCACAAGTGTCAGTTGAATTAAACTCTTGTAAGCAAGTGATTTCTACCACTTAAACAG GATTGATCAAAAGAATAAAAATTAAAAATGTTGGGAGATTTCTTAGTTCGATTTCTTCTGATGATATTTGGGTATTGTTATCCAGCTTTTCAATGCTACAAGGTGGTGGTGAAATCCCCAATTCAGGTTCAAGAGCTTCTATATTGGTGCCAATTTTGGATTATTGTGGCAATTTTAACAGTTGTTGAGAGGATTGCTGATGTTTTTGTGGGATGGTTCCCCATGTATGGAGAATTGAAGTTGGCTCTCTTTATCTATTTGTGGTATCCAAAGACTATGGGATCAGGGTATGTATTCGACCAGTTGTTGAGGCCCTTGGTTGATAGTAACGACAAAGATATCGAAAAGATGTTGTTAGATTTGAGAGTAAAAGCTTGGGATTTGGCTATTTTCTACTGGAACAATTGTACTGAGTTGAGCCAATCTGCATTTGTCAGAGTTGTTAACTACATCGCTGCTCAAAGTAACAACCTTGGTTCTACATCTTCACCTCCATCTAAGAAGGAAATGTGAACCTTTTTTTTATCACATCAATTATGGGGTTGGTGGGGGAAGCCTATGTTCGTCGTCATTGAGCTTAACCTACCAAATCTTTGACAATGAAAGTAATCTCTATTCTTATTTTTAATACAAATTAAGAAGGTAGGAATTTGAATTTGAAACCTCTTAGTTTTTAAAACTCACAAGTGTCAGTTGAATTAAACTCTTGTAAGCAAGTGATTTCTACCACTTAAACAG ATGTTGGGAGATTTCTTAGTTCGATTTCTTCTGATGATATTTGGGTATTGTTATCCAGCTTTTCAATGCTACAAGGTGGTGGTGAAATCCCCAATTCAGGTTCAAGAGCTTCTATATTGGTGCCAATTTTGGATTATTGTGGCAATTTTAACAGTTGTTGAGAGGATTGCTGATGTTTTTGTGGGATGGTTCCCCATGTATGGAGAATTGAAGTTGGCTCTCTTTATCTATTTGTGGTATCCAAAGACTATGGGATCAGGGTATGTATTCGACCAGTTGTTGAGGCCCTTGGTTGATAGTAACGACAAAGATATCGAAAAGATGTTGTTAGATTTGAGAGTAAAAGCTTGGGATTTGGCTATTTTCTACTGGAACAATTGTACTGAGTTGAGCCAATCTGCATTTGTCAGAGTTGTTAACTACATCGCTGCTCAAAGTAACAACCTTGGTTCTACATCTTCACCTCCATCTAAGAAGGAAATGTGA MLGDFLVRFLLMIFGYCYPAFQCYKVVVKSPIQVQELLYWCQFWIIVAILTVVERIADVFVGWFPMYGELKLALFIYLWYPKTMGSGYVFDQLLRPLVDSNDKDIEKMLLDLRVKAWDLAIFYWNNCTELSQSAFVRVVNYIAAQSNNLGSTSSPPSKKEM Homology
BLAST of Cmc04g0116011 vs. NCBI nr
Match: XP_008442896.1 (PREDICTED: HVA22-like protein j [Cucumis melo] >KAA0043834.1 HVA22-like protein j [Cucumis melo var. makuwa] >TYK25299.1 HVA22-like protein j [Cucumis melo var. makuwa]) HSP 1 Score: 328.9 bits (842), Expect = 2.4e-86 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Cmc04g0116011 vs. NCBI nr
Match: XP_011652855.2 (HVA22-like protein i [Cucumis sativus] >KAE8651103.1 hypothetical protein Csa_002617 [Cucumis sativus]) HSP 1 Score: 301.6 bits (771), Expect = 4.1e-78 Identity = 145/160 (90.62%), Postives = 154/160 (96.25%), Query Frame = 0
BLAST of Cmc04g0116011 vs. NCBI nr
Match: XP_038904449.1 (HVA22-like protein i [Benincasa hispida]) HSP 1 Score: 289.3 bits (739), Expect = 2.1e-74 Identity = 140/159 (88.05%), Postives = 145/159 (91.19%), Query Frame = 0
BLAST of Cmc04g0116011 vs. NCBI nr
Match: XP_023528815.1 (HVA22-like protein i [Cucurbita pepo subsp. pepo]) HSP 1 Score: 271.2 bits (692), Expect = 5.9e-69 Identity = 130/159 (81.76%), Postives = 143/159 (89.94%), Query Frame = 0
BLAST of Cmc04g0116011 vs. NCBI nr
Match: KAG6580730.1 (HVA22-like protein i, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 265.8 bits (678), Expect = 2.5e-67 Identity = 128/159 (80.50%), Postives = 140/159 (88.05%), Query Frame = 0
BLAST of Cmc04g0116011 vs. ExPASy Swiss-Prot
Match: Q8GXE9 (HVA22-like protein j OS=Arabidopsis thaliana OX=3702 GN=HVA22J PE=2 SV=2) HSP 1 Score: 171.8 bits (434), Expect = 6.4e-42 Identity = 68/163 (41.72%), Postives = 118/163 (72.39%), Query Frame = 0
BLAST of Cmc04g0116011 vs. ExPASy Swiss-Prot
Match: Q8LE10 (HVA22-like protein i OS=Arabidopsis thaliana OX=3702 GN=HVA22I PE=2 SV=2) HSP 1 Score: 170.6 bits (431), Expect = 1.4e-41 Identity = 75/159 (47.17%), Postives = 106/159 (66.67%), Query Frame = 0
BLAST of Cmc04g0116011 vs. ExPASy Swiss-Prot
Match: Q8LEM6 (HVA22-like protein h OS=Arabidopsis thaliana OX=3702 GN=HVA22H PE=2 SV=2) HSP 1 Score: 159.1 bits (401), Expect = 4.3e-38 Identity = 71/160 (44.38%), Postives = 105/160 (65.62%), Query Frame = 0
BLAST of Cmc04g0116011 vs. ExPASy Swiss-Prot
Match: Q9LR09 (Putative HVA22-like protein g OS=Arabidopsis thaliana OX=3702 GN=HVA22G PE=3 SV=2) HSP 1 Score: 156.4 bits (394), Expect = 2.8e-37 Identity = 72/160 (45.00%), Postives = 103/160 (64.38%), Query Frame = 0
BLAST of Cmc04g0116011 vs. ExPASy Swiss-Prot
Match: Q5HZP8 (Receptor expression-enhancing protein 3-B OS=Xenopus laevis OX=8355 GN=reep3-b PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.4e-17 Identity = 44/136 (32.35%), Postives = 79/136 (58.09%), Query Frame = 0
BLAST of Cmc04g0116011 vs. ExPASy TrEMBL
Match: A0A5A7TKI4 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004350 PE=3 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 1.2e-86 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Cmc04g0116011 vs. ExPASy TrEMBL
Match: A0A1S3B7K3 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103486659 PE=3 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 1.2e-86 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Cmc04g0116011 vs. ExPASy TrEMBL
Match: A0A0A0LEQ0 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G778380 PE=3 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 5.5e-73 Identity = 135/149 (90.60%), Postives = 144/149 (96.64%), Query Frame = 0
BLAST of Cmc04g0116011 vs. ExPASy TrEMBL
Match: A0A6J1FAB0 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442244 PE=3 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.2e-67 Identity = 128/159 (80.50%), Postives = 140/159 (88.05%), Query Frame = 0
BLAST of Cmc04g0116011 vs. ExPASy TrEMBL
Match: A0A6J1IYF5 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111481778 PE=3 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 4.5e-67 Identity = 127/159 (79.87%), Postives = 140/159 (88.05%), Query Frame = 0
BLAST of Cmc04g0116011 vs. TAIR 10
Match: AT2G36020.1 (HVA22-like protein J ) HSP 1 Score: 171.8 bits (434), Expect = 4.5e-43 Identity = 68/163 (41.72%), Postives = 118/163 (72.39%), Query Frame = 0
BLAST of Cmc04g0116011 vs. TAIR 10
Match: AT5G42560.1 (Abscisic acid-responsive (TB2/DP1, HVA22) family protein ) HSP 1 Score: 170.6 bits (431), Expect = 1.0e-42 Identity = 75/159 (47.17%), Postives = 106/159 (66.67%), Query Frame = 0
BLAST of Cmc04g0116011 vs. TAIR 10
Match: AT5G42560.2 (Abscisic acid-responsive (TB2/DP1, HVA22) family protein ) HSP 1 Score: 160.2 bits (404), Expect = 1.4e-39 Identity = 69/148 (46.62%), Postives = 98/148 (66.22%), Query Frame = 0
BLAST of Cmc04g0116011 vs. TAIR 10
Match: AT5G42560.3 (Abscisic acid-responsive (TB2/DP1, HVA22) family protein ) HSP 1 Score: 160.2 bits (404), Expect = 1.4e-39 Identity = 69/148 (46.62%), Postives = 98/148 (66.22%), Query Frame = 0
BLAST of Cmc04g0116011 vs. TAIR 10
Match: AT1G19950.1 (HVA22-like protein H (ATHVA22H) ) HSP 1 Score: 159.1 bits (401), Expect = 3.0e-39 Identity = 71/160 (44.38%), Postives = 105/160 (65.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|