Cmc04g0115521 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0115521
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr04: 33479612 .. 33480388 (+)
RNA-Seq Expression	Cmc04g0115521
Synteny	Cmc04g0115521

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAAAAACCTATTTGAAATTTACAACTTGACTTTAAAGTTTAAACTAAACTATAAAAAATATTCTAAAAAAAACTAAACTAAATTAGAAAATTATTATTATTTTGTTTTGTTTTTTTTTTACCTCTACGTAACAAATAAAGAAAGAAAAATAATATTGCTATGGAAAAAAAACAAAAAATATATATATTTACACGTCAGTTTTTTCAACTTCTTCCGATGGCCAACGGAACGACCTCCGCCAAAGGGGTGGAGATCGGCGTCGGTAGTGGCGAAGTTCTACAAACAGGGCAGCTAGGGTTCAGCCGCAACCATGGATCAATACAACTACCGTGAAACAGATGGCCACAGTCTGGCAACAACCGCAAAACGTCGTCGTCTTTATAATCCACCAAACAAATCGAACAACCATTCGCGGCGGCGGACTCCAATTTCCTTTCCAATTTCGCCTCCGAGTACAGAATCTTCGGATATCCATTAATAACCTCATCTTCTAGCCCCTGTACAAAATCCACGACGAAATCCCGCCGTCCCTCCTGCTGGAGACGGCGATTCGGCTGCGGAACGGTGGTTCTGGTACATAAATAGGTAGTGATTGTAAGGGTTGTGAGGAGGAAGAGGATTCCGACTGAAATTCCGACGATGAAGGGGAAACTACCGATGTCGCCGCCGCCGGAGTCCGAGGGGGAGTTCATGGAGGAAGAGAAAAAAGGTTGAAGGTGAGAAAAAGAGGATTTTTGGATTCTGCCATAGATGAGAGGAGGGAAGAAATAGATAT

mRNA sequence

TAGAAAAACCTATTTGAAATTTACAACTTGACTTTAAAGTTTAAACTAAACTATAAAAAATATTCTAAAAAAAACTAAACTAAATTAGAAAATTATTATTATTTTGTTTTGTTTTTTTTTTACCTCTACGTAACAAATAAAGAAAGAAAAATAATATTGCTATGGAAAAAAAACAAAAAATATATATATTTACACGTCAGTTTTTTCAACTTCTTCCGATGGCCAACGGAACGACCTCCGCCAAAGGGGTGGAGATCGGCGTCGGTAGTGGCGAAGTTCTACAAACAGGGCAGCTAGGGTTCAGCCGCAACCATGGATCAATACAACTACCGTGAAACAGATGGCCACAGTCTGGCAACAACCGCAAAACGTCGTCGTCTTTATAATCCACCAAACAAATCGAACAACCATTCGCGGCGGCGGACTCCAATTTCCTTTCCAATTTCGCCTCCGAGTACAGAATCTTCGGATATCCATTAATAACCTCATCTTCTAGCCCCTGTACAAAATCCACGACGAAATCCCGCCGTCCCTCCTGCTGGAGACGGCGATTCGGCTGCGGAACGGTGGTTCTGGTACATAAATAGGTAGTGATTGTAAGGGTTGTGAGGAGGAAGAGGATTCCGACTGAAATTCCGACGATGAAGGGGAAACTACCGATGTCGCCGCCGCCGGAGTCCGAGGGGGAGTTCATGGAGGAAGAGAAAAAAGGTTGAAGGTGAGAAAAAGAGGATTTTTGGATTCTGCCATAGATGAGAGGAGGGAAGAAATAGATAT

Coding sequence (CDS)

ATGGATCAATACAACTACCGTGAAACAGATGGCCACAGTCTGGCAACAACCGCAAAACGTCGTCGTCTTTATAATCCACCAAACAAATCGAACAACCATTCGCGGCGGCGGACTCCAATTTCCTTTCCAATTTCGCCTCCGAGTACAGAATCTTCGGATATCCATTAA

Protein sequence

MDQYNYRETDGHSLATTAKRRRLYNPPNKSNNHSRRRTPISFPISPPSTESSDIH

Homology

The following BLAST results are available for this feature:

BLAST of Cmc04g0115521 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc04g0115521 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc04g0115521 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc04g0115521 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0115521.1	Cmc04g0115521.1	mRNA