Cmc04g0113131 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0113131
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr04: 31760139 .. 31761916 (-)
RNA-Seq ExpressionCmc04g0113131
SyntenyCmc04g0113131
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACTCCTGACTCCCCCACCCTTTGTGGGCCGTCCCATAACATAACACCCCAACATGCGCCTTCAAGTTCACATATATATACACACACACACACATTAATCTCTCTCACCATTTTCATTTTCTCCCACCACCGTCTTTTCCGTCCCATGCGGCGGCGCTTATGGAAGAGCGGGAGTTTTTTTTTTAGATACTAATTACCAGACGATGATCGGTGTCGTCGTCGTTGGTTTTGATGGTAAAGTTTTTCGGATTGATCTGCCCCGTGGTTCTCGTGCTATGGACGGCGGCGCTCGTGGTGCTTCCGGTGGTGTTGCCGCCGCTTCCTCCACCCCCATTGCCGGTTCTTCTTGTGCCTGTTTTGATATTGGGAATTCTTGTTTTTTGTGCTTTCTCCACTTCTCAGCTGCCTGATACGTACGGCCATCATCGTTTTTCCTAATTATATTCAAATTTCTTGTTTATTTCTTGTTTTTTCTTTTTTTTTCCTTTTCTATTTAGAGTTACATTATCATCGTTTTGTATACTTTTTTTTTTTTTTGTAATGTATATATACCAATTTTCTTGTTTCGTTTTCTGGGCCTTTTTTTTTTTCTATTTTTTCTGATTTGAGTTTTGGTAGAATGTAAGGAGTAATGAAATGTTAAATTGGAATAAAAAAAAAATTACACAAATTACACCATCTCTTTTAGACAAGTTATCACAATCTTTTACTTTAAACTGGAAAAAAAAAATAGTTCTAACTTTTATCCTCACAAACTGTTGTTTGAAAATTATAAAAAAAATTATCGAAAATAACAAACTTGATAAAATATATACTCCTTGTAATAAGATTGAGTTGTTGTTGTTTTTTATTTTGGTGTGAGTTTTTGTCAATGTCTTGTTTTTTTTTTTCATTATTATTATTATTATTTAAAAGAAAACCCTGAAGACCGACTTTATGAAATATGTTAGCCTAAAAATGTGATCCAATAAAAAAAAAAAAAAAAAAAAAAACCATTGAAGTAAATTTTTGCTAATATTTCTAATAGGTTAATTGGGAATTTATCAACTTTAAATTGGTGTGTGTGTTTTTTAGTACTTGGAAATTATTGATATGATTCAATTTTTTAAGATTAACTTTTGCATCAATAATTTCTTTTTTCTTTTTTGCTAAAATTGAATGATATAAGTTGGTGAAAATGGAAAAATAATTATTGAGGAAAATTGCATATTTAATTAATTCTAAGATCCAATAGGTTGATATAGTTAAAATTTTGAAGTGAAAATTTGTGTTGATGCAATAAAAGTTTTAACTTTTTCACTCTCTCTTTATATATATATATAAATGCCCAATTGTGGGTACACTATACTTTCTTTCAATGACTCTTTTTTTTCAATGTGTTTATTTTTACAAGTTGGAATCTTTATTCTTGCACCTATAATAATGTTATATTATATATTTAGAAAGAAAAACAAAACAACAAAACCATTCATGTATTACCCAAATAATTGCATAAATCTAAGTACTATGTGGGAGGATAAGCTTTGTAATGTTATTCCGCTAACTCAGTATTTTTATTTCTTTTTAGTTCCAACAGATAGCAAGCGGACAATTCCAATTGATCCAACCTCAAGTCTTGGAGTATTGTCTTGAACACTAAGTAATCGTGTGTGTTCGTATTCAATCGTCTAATAAAATTTTCAACTTTGTATTTCCAAACGCTAAAAAAATAAAATCAACTTTATGTTTAATGGATCTCGATAACTTATTAGATATAAAATCATGCATGATGAATAAAA

mRNA sequence

CACTCCTGACTCCCCCACCCTTTGTGGGCCGTCCCATAACATAACACCCCAACATGCGCCTTCAAGTTCACATATATATACACACACACACACATTAATCTCTCTCACCATTTTCATTTTCTCCCACCACCGTCTTTTCCGTCCCATGCGGCGGCGCTTATGGAAGAGCGGGAGTTTTTTTTTTAGATACTAATTACCAGACGATGATCGGTGTCGTCGTCGTTGGTTTTGATGGTAAAGTTTTTCGGATTGATCTGCCCCGTGGTTCTCGTGCTATGGACGGCGGCGCTCGTGGTGCTTCCGGTGGTGTTGCCGCCGCTTCCTCCACCCCCATTGCCGGTTCTTCTTGTGCCTGTTTTGATATTGGGAATTCTTGTTTTTTGTGCTTTCTCCACTTCTCAGCTGCCTGATACTTCCAACAGATAGCAAGCGGACAATTCCAATTGATCCAACCTCAAGTCTTGGAGTATTGTCTTGAACACTAAGTAATCGTGTGTGTTCGTATTCAATCGTCTAATAAAATTTTCAACTTTGTATTTCCAAACGCTAAAAAAATAAAATCAACTTTATGTTTAATGGATCTCGATAACTTATTAGATATAAAATCATGCATGATGAATAAAA

Coding sequence (CDS)

ATGATCGGTGTCGTCGTCGTTGGTTTTGATGGTAAAGTTTTTCGGATTGATCTGCCCCGTGGTTCTCGTGCTATGGACGGCGGCGCTCGTGGTGCTTCCGGTGGTGTTGCCGCCGCTTCCTCCACCCCCATTGCCGGTTCTTCTTGTGCCTGTTTTGATATTGGGAATTCTTGTTTTTTGTGCTTTCTCCACTTCTCAGCTGCCTGA

Protein sequence

MIGVVVVGFDGKVFRIDLPRGSRAMDGGARGASGGVAAASSTPIAGSSCACFDIGNSCFLCFLHFSAA
Homology
[Close]
BLAST of Cmc04g0113131 vs. NCBI nr
Match: KAA0053879.1 (hypothetical protein E6C27_scaffold135G002720 [Cucumis melo var. makuwa] >TYK25525.1 hypothetical protein E5676_scaffold352G006770 [Cucumis melo var. makuwa])

HSP 1 Score: 129.0 bits (323), Expect = 1.5e-26
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MIGVVVVGFDGKVFRIDLPRGSRAMDGGARGASGGVAAASSTPIAGSSCACFDIGNSCFL 60
          MIGVVVVGFDGKVFRIDLPRGSRAMDGGARGAS GVAAASSTPIAGSSCACFDIGNSCFL
Sbjct: 1  MIGVVVVGFDGKVFRIDLPRGSRAMDGGARGASCGVAAASSTPIAGSSCACFDIGNSCFL 60

Query: 61 CFLHFSAA 69
          CFLHFSAA
Sbjct: 61 CFLHFSAA 68

[Close]
BLAST of Cmc04g0113131 vs. ExPASy TrEMBL
Match: A0A5D3DPV7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006770 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.4e-27
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MIGVVVVGFDGKVFRIDLPRGSRAMDGGARGASGGVAAASSTPIAGSSCACFDIGNSCFL 60
          MIGVVVVGFDGKVFRIDLPRGSRAMDGGARGAS GVAAASSTPIAGSSCACFDIGNSCFL
Sbjct: 1  MIGVVVVGFDGKVFRIDLPRGSRAMDGGARGASCGVAAASSTPIAGSSCACFDIGNSCFL 60

Query: 61 CFLHFSAA 69
          CFLHFSAA
Sbjct: 61 CFLHFSAA 68

[Close]
BLAST of Cmc04g0113131 vs. ExPASy TrEMBL
Match: A0A0A0LEW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G821035 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.8e-18
Identity = 57/68 (83.82%), Postives = 58/68 (85.29%), Query Frame = 0 

Query: 1  MIGVVVVGFDGKVFRIDLPRGSRAMDGGARGASGGVAAASSTPIAGSSCACFDIGNSCFL 60
          MIG  VVGFDGKV R  L RGS AMDGGA GASGGVAAASST IA SSCACFDIG+SCFL
Sbjct: 1  MIG--VVGFDGKVLRSHLRRGSGAMDGGAGGASGGVAAASSTTIARSSCACFDIGSSCFL 60

Query: 61 CFLHFSAA 69
          CFLHFSAA
Sbjct: 61 CFLHFSAA 66

The following BLAST results are available for this feature:
BLAST of Cmc04g0113131 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0053879.11.5e-2698.53hypothetical protein E6C27_scaffold135G002720 [Cucumis melo var. makuwa] >TYK255... [more]
BLAST of Cmc04g0113131 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc04g0113131 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DPV77.4e-2798.53Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LEW12.8e-1883.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G821035 PE=4 SV=1[more]
BLAST of Cmc04g0113131 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0113131.1Cmc04g0113131.1mRNA