Cmc04g0113121 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0113121
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr04: 31750790 .. 31751682 (+)
RNA-Seq ExpressionCmc04g0113121
SyntenyCmc04g0113121
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTCCTTTGCTTTCACCCCCTTCAACTTCATGTTTCCTTTTCCATACCCAAACTAAATACCCACCAAAAAGAAAAAACACCCCTTTCAATGGCAGCAACAATGGCGAATCTTGACGAGTCCTGACACCAGTTGTGTTGGCCACGGGTGGTGGTTCGATCCTTTTCTCCCGTCTCTTTCCATGGTGCAAACGATCGAGTGCGAAACGCTGTTTCAGACGTTTCCACTCTTATCGTTCCTTACAATAAAGAGGTTTTGTTTTTTCCTTCAAGAATTTTCTTCGATGTCTGCCCACAAAAAAACGTCGATGGAGGGCTTTGCCCATGTTTTTCTTAAGACCAAAATTCTCGTAGTTTGTTGGTTACGTAAATTTCACTATCGTTTTTCTAATTTGGTCAGATCTTCCGACGACGGTTTTGACGTAAGAGACAAGATTGAGAAGAGGCCGACGACATCATCTATATTTGATGGTAAATTATTGCGGTCTAAGTTCAGTGATGGTTTTACTTGTGTGGACAGCTTCTTTGCTTCTGTTGCCACTGGTGGTGCCGCCGCTTCCTCCACCACCGTTGGCAGTTCTCGGGCTGCCGGTTTTGATATTGGGTGTTTTGTTGTTCTTGGCTTTCTCTTCTTCTCATCGGGTCCCTAACACTGTCATGATTATTTGCTGCTGAAGACGACGTTGTAATTAATCTGTAAATTTTGAATACTATACAGTGTTGATATATATATCATATATTAACCATGCAGAGAGAACTATTGTACGTATCATCAAAAACTCTCTCTCTCTCTCTTTTTAATATGTTTGTGTTTTTGTGGATACAAATTTCGAAAATTTGGATGAATAGGTTTATTATGGGTATGATATTTGATTATGTTAGATTAAATTGTGGT

mRNA sequence

GATTCCTTTGCTTTCACCCCCTTCAACTTCATGTTTCCTTTTCCATACCCAAACTAAATACCCACCAAAAAGAAAAAACACCCCTTTCAATGGCAGCAACAATGGCGAATCTTGACGAGTCCTGACACCAGTTGTGTTGGCCACGGGTGGTGGTTCGATCCTTTTCTCCCGTCTCTTTCCATGGTGCAAACGATCGAGTGCGAAACGCTGTTTCAGACGTTTCCACTCTTATCGTTCCTTACAATAAAGAGATCTTCCGACGACGGTTTTGACGTAAGAGACAAGATTGAGAAGAGGCCGACGACATCATCTATATTTGATGGTAAATTATTGCGGTCTAAGTTCAGTGATGGTTTTACTTGTGTGGACAGCTTCTTTGCTTCTGTTGCCACTGGTGGTGCCGCCGCTTCCTCCACCACCGTTGGCAGTTCTCGGGCTGCCGGTTTTGATATTGGGTGTTTTGTTGTTCTTGGCTTTCTCTTCTTCTCATCGGGTCCCTAACACTGTCATGATTATTTGCTGCTGAAGACGACGTTGTAATTAATCTGTAAATTTTGAATACTATACAGTGTTGATATATATATCATATATTAACCATGCAGAGAGAACTATTGTACGTATCATCAAAAACTCTCTCTCTCTCTCTTTTTAATATGTTTGTGTTTTTGTGGATACAAATTTCGAAAATTTGGATGAATAGGTTTATTATGGGTATGATATTTGATTATGTTAGATTAAATTGTGGT

Coding sequence (CDS)

ATGGTGCAAACGATCGAGTGCGAAACGCTGTTTCAGACGTTTCCACTCTTATCGTTCCTTACAATAAAGAGATCTTCCGACGACGGTTTTGACGTAAGAGACAAGATTGAGAAGAGGCCGACGACATCATCTATATTTGATGGTAAATTATTGCGGTCTAAGTTCAGTGATGGTTTTACTTGTGTGGACAGCTTCTTTGCTTCTGTTGCCACTGGTGGTGCCGCCGCTTCCTCCACCACCGTTGGCAGTTCTCGGGCTGCCGGTTTTGATATTGGGTGTTTTGTTGTTCTTGGCTTTCTCTTCTTCTCATCGGGTCCCTAA

Protein sequence

MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFTCVDSFFASVATGGAAASSTTVGSSRAAGFDIGCFVVLGFLFFSSGP
Homology
[Close]
BLAST of Cmc04g0113121 vs. NCBI nr
Match: XP_008443266.1 (PREDICTED: uncharacterized protein LOC103486890 [Cucumis melo] >KAA0053878.1 uncharacterized protein E6C27_scaffold135G002710 [Cucumis melo var. makuwa] >TYK25526.1 uncharacterized protein E5676_scaffold352G006780 [Cucumis melo var. makuwa])

HSP 1 Score: 204.1 bits (518), Expect = 5.8e-49
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFT 60
           MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFT
Sbjct: 1   MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFT 60

Query: 61  CVDSFFASVATGGAAASSTTVGSSRAAGFDIGCFVVLGFLFFSSGP 107
           CVDSFFASVATGGAAASSTTVGSSRAAGFDIGCFVVLGFLFFSSGP
Sbjct: 61  CVDSFFASVATGGAAASSTTVGSSRAAGFDIGCFVVLGFLFFSSGP 106

[Close]
BLAST of Cmc04g0113121 vs. NCBI nr
Match: KAE8651183.1 (hypothetical protein Csa_002001, partial [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-18
Identity = 63/87 (72.41%), Postives = 64/87 (73.56%), Query Frame = 0 

Query: 1  MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFT 60
          MVQTIEC TLFQTFPL SFLT KRS DDGFDV  K         I+D     SKFSDGFT
Sbjct: 1  MVQTIECGTLFQTFPLSSFLTTKRSFDDGFDVGGK------RRGIYD-----SKFSDGFT 60

Query: 61 CVDSFFASVATGGAAASSTTVGSSRAA 88
           VDSFFASVATGGAAASS TVG SRAA
Sbjct: 61 SVDSFFASVATGGAAASSATVGDSRAA 76

[Close]
BLAST of Cmc04g0113121 vs. ExPASy TrEMBL
Match: A0A5D3DPE0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006780 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.8e-49
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFT 60
           MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFT
Sbjct: 1   MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFT 60

Query: 61  CVDSFFASVATGGAAASSTTVGSSRAAGFDIGCFVVLGFLFFSSGP 107
           CVDSFFASVATGGAAASSTTVGSSRAAGFDIGCFVVLGFLFFSSGP
Sbjct: 61  CVDSFFASVATGGAAASSTTVGSSRAAGFDIGCFVVLGFLFFSSGP 106

[Close]
BLAST of Cmc04g0113121 vs. ExPASy TrEMBL
Match: A0A1S3B754 (uncharacterized protein LOC103486890 OS=Cucumis melo OX=3656 GN=LOC103486890 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.8e-49
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFT 60
           MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFT
Sbjct: 1   MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFT 60

Query: 61  CVDSFFASVATGGAAASSTTVGSSRAAGFDIGCFVVLGFLFFSSGP 107
           CVDSFFASVATGGAAASSTTVGSSRAAGFDIGCFVVLGFLFFSSGP
Sbjct: 61  CVDSFFASVATGGAAASSTTVGSSRAAGFDIGCFVVLGFLFFSSGP 106

[Close]
BLAST of Cmc04g0113121 vs. ExPASy TrEMBL
Match: A0A0A0LBQ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G821040 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.2e-29
Identity = 80/106 (75.47%), Postives = 82/106 (77.36%), Query Frame = 0 

Query: 1   MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFT 60
           MVQTIEC TLFQTFPL SFLT KRS DDGFDV  K         I+D     SKFSDGFT
Sbjct: 1   MVQTIECGTLFQTFPLSSFLTTKRSFDDGFDVGGK------RRGIYD-----SKFSDGFT 60

Query: 61  CVDSFFASVATGGAAASSTTVGSSRAAGFDIGCFVVLGFLFFSSGP 107
            VDSFFASVATGGAAASS TVG SRAAGFDIGCFVVLGFLFFS+ P
Sbjct: 61  SVDSFFASVATGGAAASSATVGDSRAAGFDIGCFVVLGFLFFSTDP 95

The following BLAST results are available for this feature:
BLAST of Cmc04g0113121 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008443266.15.8e-49100.00PREDICTED: uncharacterized protein LOC103486890 [Cucumis melo] >KAA0053878.1 unc... [more]
KAE8651183.11.8e-1872.41hypothetical protein Csa_002001, partial [Cucumis sativus][more]
BLAST of Cmc04g0113121 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc04g0113121 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DPE02.8e-49100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B7542.8e-49100.00uncharacterized protein LOC103486890 OS=Cucumis melo OX=3656 GN=LOC103486890 PE=... [more]
A0A0A0LBQ94.2e-2975.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G821040 PE=4 SV=1[more]
BLAST of Cmc04g0113121 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0113121.1Cmc04g0113121.1mRNA