Cmc04g0111861 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0111861
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ribonuclease T(2)
Location	CMiso1.1chr04: 30895551 .. 30895826 (+)
RNA-Seq Expression	Cmc04g0111861
Synteny	Cmc04g0111861

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAAACAAAGAGAGATGTTGTGTTCTTCGTATTTGTCTTAACCATTTTGTTTCCTATCGTTAAATCGCAAACTTTCGATAATTTTTGGTTTGTTCAACAATGGCCACCAGCTATTTGTACTTTACAATCAGGGCGATGTGTAGGACGAGGGACTCGATCCTTCACAATCCATGGTTTGTGGCCTCAAAAGGGAGGAAGATCTGTGACTAATTGTAGTGGCAATTCATTTGACTTCACTAAGGTAAATTGGTTTCAAACATCCAAAATATAA

mRNA sequence

ATGGAAAAAACAAAGAGAGATGTTGTGTTCTTCGTATTTGTCTTAACCATTTTGTTTCCTATCGTTAAATCGCAAACTTTCGATAATTTTTGGTTTGTTCAACAATGGCCACCAGCTATTTGTACTTTACAATCAGGGCGATGTGTAGGACGAGGGACTCGATCCTTCACAATCCATGGTTTGTGGCCTCAAAAGGGAGGAAGATCTGTGACTAATTGTAGTGGCAATTCATTTGACTTCACTAAGGTAAATTGGTTTCAAACATCCAAAATATAA

Coding sequence (CDS)

ATGGAAAAAACAAAGAGAGATGTTGTGTTCTTCGTATTTGTCTTAACCATTTTGTTTCCTATCGTTAAATCGCAAACTTTCGATAATTTTTGGTTTGTTCAACAATGGCCACCAGCTATTTGTACTTTACAATCAGGGCGATGTGTAGGACGAGGGACTCGATCCTTCACAATCCATGGTTTGTGGCCTCAAAAGGGAGGAAGATCTGTGACTAATTGTAGTGGCAATTCATTTGACTTCACTAAGGTAAATTGGTTTCAAACATCCAAAATATAA

Protein sequence

MEKTKRDVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIHGLWPQKGGRSVTNCSGNSFDFTKVNWFQTSKI

Homology

[Close]

BLAST of Cmc04g0111861 vs. NCBI nr
Match: XP_008443402.1 (PREDICTED: ribonuclease MC-like [Cucumis melo])

HSP 1 Score: 179.5 bits (454), Expect = 1.3e-41
Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MEKTKRDVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIHG 60
          MEKTKRDVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIHG
Sbjct: 1  MEKTKRDVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIHG 60

Query: 61 LWPQKGGRSVTNCSGNSFDFTKV 84
          LWPQKGGRSVTNCSGNSFDFTK+
Sbjct: 61 LWPQKGGRSVTNCSGNSFDFTKI 83

[Close]

BLAST of Cmc04g0111861 vs. NCBI nr
Match: XP_004147499.1 (ribonuclease MC [Cucumis sativus] >KGN59560.1 hypothetical protein Csa_002553 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 5.2e-38
Identity = 77/84 (91.67%), Postives = 81/84 (96.43%), Query Frame = 0


Query: 1  MEKTKR-DVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIH 60
          MEKTK  DVVFFVFVLTILFPIVKSQTFD+FWFVQQWPPA+CTLQSGRCVGRGTRSFTIH
Sbjct: 1  MEKTKSVDVVFFVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIH 60

Query: 61 GLWPQKGGRSVTNCSGNSFDFTKV 84
          GLWPQKGGRSVTNC+GN FDFTK+
Sbjct: 61 GLWPQKGGRSVTNCTGNQFDFTKI 84

[Close]

BLAST of Cmc04g0111861 vs. NCBI nr
Match: XP_038905534.1 (ribonuclease MC-like [Benincasa hispida])

HSP 1 Score: 156.0 bits (393), Expect = 1.6e-34
Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1  MEKTKRDVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIHG 60
          M  TKR++V  VF LTILFPIV+SQTFD+FWFVQQWPPA+C LQSGRCVGRGTRSFTIHG
Sbjct: 1  MATTKRNIVLLVFGLTILFPIVQSQTFDDFWFVQQWPPAVCALQSGRCVGRGTRSFTIHG 60

Query: 61 LWPQKGGRSVTNCSGNSFDFTKV 84
          LWPQKGG SVTNC+GNSFDFTK+
Sbjct: 61 LWPQKGGSSVTNCAGNSFDFTKI 83

[Close]

BLAST of Cmc04g0111861 vs. NCBI nr
Match: XP_022155091.1 (ribonuclease MC-like [Momordica charantia])

HSP 1 Score: 136.3 bits (342), Expect = 1.3e-28
Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 1  MEKTKRDVVF-FVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIH 60
          M+ ++R++VF FV  +TI  PIVKSQTFD+FWFVQQWPPA+C+ Q GRCVG+G R+FTIH
Sbjct: 1  MKTSRREIVFMFVLAITIFLPIVKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLRTFTIH 60

Query: 61 GLWPQKGGRSVTNCSGNSFDFTKVNWFQT 89
          G+WPQKGG SV NC G  FDFTK++  +T
Sbjct: 61 GVWPQKGGTSVVNCPGTPFDFTKISSLET 89

[Close]

BLAST of Cmc04g0111861 vs. NCBI nr
Match: BAA10891.1 (ribonuclease (RNase LC1) [Luffa aegyptiaca])

HSP 1 Score: 135.2 bits (339), Expect = 2.8e-28
Identity = 59/89 (66.29%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 1  MEKTKRDVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIHG 60
          M   KR++V  VFVLTILFP+VKSQTFD+FW VQ WPPA+C+ Q GRCVG+G RSFTIHG
Sbjct: 1  MAMAKREIV-LVFVLTILFPMVKSQTFDSFWMVQHWPPAVCSFQQGRCVGQGLRSFTIHG 60

Query: 61 LWPQKGGRSVTNCSGNSFDFTKVNWFQTS 90
          +WPQKGG SV NC G +FDFTK++  +++
Sbjct: 61 VWPQKGGTSVINCPGPTFDFTKISHLEST 88

[Close]

BLAST of Cmc04g0111861 vs. ExPASy Swiss-Prot
Match: P23540 (Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.1e-18
Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 27 FDNFWFVQQWPPAICTLQ-SGRCVGRGTRSFTIHGLWPQKGGRSVTNC-SGNSFDFTKVN 86
          FD+FWFVQQWPPA+C+ Q SG C G G R+FTIHGLWPQ  G S+TNC  G+ FD TK++
Sbjct: 1  FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQGSGTSLTNCPQGSPFDITKIS 60

Query: 87 WFQT 89
            Q+
Sbjct: 61 HLQS 64

[Close]

BLAST of Cmc04g0111861 vs. ExPASy Swiss-Prot
Match: P80196 (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 4.4e-08
Identity = 31/81 (38.27%), Postives = 43/81 (53.09%), Query Frame = 0


Query: 1  MEKTKRDVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRC---VGRGTRSFT 60
          M+  K+ ++  + V  +L   V SQ FD F+FVQQWP + C  +   C    G+    F+
Sbjct: 2  MKSQKKLLIKIIVVQCLLVLCVTSQDFDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDFS 61

Query: 61 IHGLWPQ-KGGRSVTNCSGNS 78
          IHGLWP  K G+   NC   S
Sbjct: 62 IHGLWPNYKDGKWPQNCDRES 82

[Close]

BLAST of Cmc04g0111861 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-06
Identity = 34/82 (41.46%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 10 FFVFVLTILFPIVKS--QTFDNFWFVQQWPPAICTLQSGRC---VGRGTRSFTIHGLWPQ 69
          FF+F+L +    V+S  Q FD F+FV QWP A C  +   C    G+    F IHGLWP 
Sbjct: 3  FFIFILALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWPN 62

Query: 70 -KGGRSVTNCSGNS-FDFTKVN 85
           K G    NC+ +S FD  +V+
Sbjct: 63 YKTGGWPQNCNPDSRFDDLRVS 84

[Close]

BLAST of Cmc04g0111861 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-06
Identity = 32/85 (37.65%), Postives = 43/85 (50.59%), Query Frame = 0


Query: 15 LTILFPIV-----KSQTFDNFWFVQQWPPAICTLQSGRCV---GRGTRSFTIHGLWPQ-K 74
          L ++ P V      S+ FD F+FVQQWP + C  Q   C    G+    F IHGLWP  K
Sbjct: 13 LLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWPNYK 72

Query: 75 GGRSVTNCSGNS-FDFTKVNWFQTS 90
           G   +NC  +  FD + ++   TS
Sbjct: 73 DGTYPSNCDASKPFDSSTISDLLTS 97

[Close]

BLAST of Cmc04g0111861 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 7.1e-06
Identity = 24/58 (41.38%), Postives = 31/58 (53.45%), Query Frame = 0


Query: 24 SQTFDNFWFVQQWPPAICTLQSGRC---VGRGTRSFTIHGLWPQKG-GRSVTNCSGNS 78
          ++ FD F+FVQQWP + C  +   C    G+    F IHGLWP    G   +NC  NS
Sbjct: 26 AKDFDFFYFVQQWPGSYCDTKQSCCYPTTGKPAADFGIHGLWPNNNDGTYPSNCDPNS 83

[Close]

BLAST of Cmc04g0111861 vs. ExPASy TrEMBL
Match: A0A1S3B8Q3 (Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103486996 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.4e-42
Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MEKTKRDVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIHG 60
          MEKTKRDVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIHG
Sbjct: 1  MEKTKRDVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIHG 60

Query: 61 LWPQKGGRSVTNCSGNSFDFTKV 84
          LWPQKGGRSVTNCSGNSFDFTK+
Sbjct: 61 LWPQKGGRSVTNCSGNSFDFTKI 83

[Close]

BLAST of Cmc04g0111861 vs. ExPASy TrEMBL
Match: A0A0A0LC37 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G825050 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.5e-38
Identity = 77/84 (91.67%), Postives = 81/84 (96.43%), Query Frame = 0


Query: 1  MEKTKR-DVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIH 60
          MEKTK  DVVFFVFVLTILFPIVKSQTFD+FWFVQQWPPA+CTLQSGRCVGRGTRSFTIH
Sbjct: 1  MEKTKSVDVVFFVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIH 60

Query: 61 GLWPQKGGRSVTNCSGNSFDFTKV 84
          GLWPQKGGRSVTNC+GN FDFTK+
Sbjct: 61 GLWPQKGGRSVTNCTGNQFDFTKI 84

[Close]

BLAST of Cmc04g0111861 vs. ExPASy TrEMBL
Match: A0A6J1DQN7 (ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111022224 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 6.2e-29
Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 1  MEKTKRDVVF-FVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIH 60
          M+ ++R++VF FV  +TI  PIVKSQTFD+FWFVQQWPPA+C+ Q GRCVG+G R+FTIH
Sbjct: 1  MKTSRREIVFMFVLAITIFLPIVKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLRTFTIH 60

Query: 61 GLWPQKGGRSVTNCSGNSFDFTKVNWFQT 89
          G+WPQKGG SV NC G  FDFTK++  +T
Sbjct: 61 GVWPQKGGTSVVNCPGTPFDFTKISSLET 89

[Close]

BLAST of Cmc04g0111861 vs. ExPASy TrEMBL
Match: Q40115 (Ribonuclease (RNase LC1) OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28
Identity = 59/89 (66.29%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 1  MEKTKRDVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIHG 60
          M   KR++V  VFVLTILFP+VKSQTFD+FW VQ WPPA+C+ Q GRCVG+G RSFTIHG
Sbjct: 1  MAMAKREIV-LVFVLTILFPMVKSQTFDSFWMVQHWPPAVCSFQQGRCVGQGLRSFTIHG 60

Query: 61 LWPQKGGRSVTNCSGNSFDFTKVNWFQTS 90
          +WPQKGG SV NC G +FDFTK++  +++
Sbjct: 61 VWPQKGGTSVINCPGPTFDFTKISHLEST 88

[Close]

BLAST of Cmc04g0111861 vs. ExPASy TrEMBL
Match: A0A6J1CKH7 (Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111012440 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.4e-28
Identity = 58/85 (68.24%), Postives = 68/85 (80.00%), Query Frame = 0


Query: 4  TKRDVV-FFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIHGLW 63
          +KR+VV  F   +TI FP+VKSQ FDNFWFVQQWPPA+C  Q GRCVG+G R+FT+HGLW
Sbjct: 8  SKREVVLMFALTITIFFPVVKSQAFDNFWFVQQWPPAVCNFQQGRCVGQGLRTFTVHGLW 67

Query: 64 PQKGGRSVTNCSGNSFDFTKVNWFQ 88
          PQKGG SV NCSG  FDFT+V+  Q
Sbjct: 68 PQKGGTSVINCSGTRFDFTQVSHLQ 92

[Close]

BLAST of Cmc04g0111861 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 )

HSP 1 Score: 53.9 bits (128), Expect = 7.8e-08
Identity = 34/82 (41.46%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 10 FFVFVLTILFPIVKS--QTFDNFWFVQQWPPAICTLQSGRC---VGRGTRSFTIHGLWPQ 69
          FF+F+L +    V+S  Q FD F+FV QWP A C  +   C    G+    F IHGLWP 
Sbjct: 3  FFIFILALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWPN 62

Query: 70 -KGGRSVTNCSGNS-FDFTKVN 85
           K G    NC+ +S FD  +V+
Sbjct: 63 YKTGGWPQNCNPDSRFDDLRVS 84

[Close]

BLAST of Cmc04g0111861 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 )

HSP 1 Score: 53.5 bits (127), Expect = 1.0e-07
Identity = 32/85 (37.65%), Postives = 43/85 (50.59%), Query Frame = 0


Query: 15 LTILFPIV-----KSQTFDNFWFVQQWPPAICTLQSGRCV---GRGTRSFTIHGLWPQ-K 74
          L ++ P V      S+ FD F+FVQQWP + C  Q   C    G+    F IHGLWP  K
Sbjct: 13 LLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWPNYK 72

Query: 75 GGRSVTNCSGNS-FDFTKVNWFQTS 90
           G   +NC  +  FD + ++   TS
Sbjct: 73 DGTYPSNCDASKPFDSSTISDLLTS 97

[Close]

BLAST of Cmc04g0111861 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein )

HSP 1 Score: 49.3 bits (116), Expect = 1.9e-06
Identity = 30/83 (36.14%), Postives = 42/83 (50.60%), Query Frame = 0


Query: 7  DVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCV---GRGTRSFTIHGLWP 66
          +V+  + V   LF     + FD F+FV QWP A C      C    G+    F IHGLWP
Sbjct: 8  NVLLKLLVFQGLFVSRPQEDFDFFYFVLQWPGAYCDTSRACCYPTSGKPAADFGIHGLWP 67

Query: 67 Q-KGGRSVTNCSGNS-FDFTKVN 85
             GG   +NC  +S FD ++++
Sbjct: 68 NYNGGSWPSNCDPDSQFDRSQIS 90

[Close]

BLAST of Cmc04g0111861 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein )

HSP 1 Score: 46.6 bits (109), Expect = 1.2e-05
Identity = 30/87 (34.48%), Postives = 41/87 (47.13%), Query Frame = 0


Query: 6  RDVVFFVFVLTILFPIVKSQT---FDNFWFVQQWPPAICTLQSGRC---VGRGTRSFTIH 65
          R ++    ++     +  SQT   F+ F++V  WP AIC  Q G C    G     F IH
Sbjct: 2  RGIIIVSLLILQSLVVSSSQTEPDFNFFYWVNYWPGAICDSQKGCCPPTKGNTASDFIIH 61

Query: 66 GLWPQ-KGGRSVTNC-SGNSFDFTKVN 85
          GLWPQ   G     C   N FD +K++
Sbjct: 62 GLWPQFNNGTWPAFCDQTNLFDISKIS 88

The following BLAST results are available for this feature:

BLAST of Cmc04g0111861 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443402.1	1.3e-41	98.80	PREDICTED: ribonuclease MC-like [Cucumis melo]	[more]
XP_004147499.1	5.2e-38	91.67	ribonuclease MC [Cucumis sativus] >KGN59560.1 hypothetical protein Csa_002553 [C...	[more]
XP_038905534.1	1.6e-34	83.13	ribonuclease MC-like [Benincasa hispida]	[more]
XP_022155091.1	1.3e-28	65.17	ribonuclease MC-like [Momordica charantia]	[more]
BAA10891.1	2.8e-28	66.29	ribonuclease (RNase LC1) [Luffa aegyptiaca]	[more]

BLAST of Cmc04g0111861 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23540	2.1e-18	62.50	Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1	[more]
P80196	4.4e-08	38.27	Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2	[more]
P42815	1.1e-06	41.46	Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1	[more]
P42813	1.4e-06	37.65	Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1	[more]
P80022	7.1e-06	41.38	Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2	[more]

BLAST of Cmc04g0111861 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B8Q3	6.4e-42	98.80	Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103486996 PE=3 SV=1	[more]
A0A0A0LC37	2.5e-38	91.67	Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G825050 PE=3 SV=1	[more]
A0A6J1DQN7	6.2e-29	65.17	ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111022224 PE=3 SV=1	[more]
Q40115	1.4e-28	66.29	Ribonuclease (RNase LC1) OS=Luffa aegyptiaca OX=3670 PE=2 SV=1	[more]
A0A6J1CKH7	2.4e-28	68.24	Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111012440 PE=3 SV=1	[more]

BLAST of Cmc04g0111861 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26820.1	7.8e-08	41.46	ribonuclease 3	[more]
AT2G02990.1	1.0e-07	37.65	ribonuclease 1	[more]
AT1G14220.1	1.9e-06	36.14	Ribonuclease T2 family protein	[more]
AT1G14210.1	1.2e-05	34.48	Ribonuclease T2 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 27..82 e-value: 2.9E-10 score: 40.6
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 27..90 e-value: 3.5E-14 score: 55.2
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 9..84
IPR018188	Ribonuclease T2, His active site 1	PROSITE	PS00530	RNASE_T2_1	coord: 56..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0111861.1	Cmc04g0111861.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006401	RNA catabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding