Cmc04g0111501 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0111501
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag protease polyprotein
Location	CMiso1.1chr04: 30565192 .. 30576248 (-)
RNA-Seq Expression	Cmc04g0111501
Synteny	Cmc04g0111501

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGAATATTTAGTTTGAATTTTTATATGTTGTTCTCAGTGGACGACTGTTACTCGAGACGACTTCTCTTGTTGAGTATCAATAAAGATTTTTTTCCTCGAGTATAATTTATATTTTTGTAAGAATATTCTCTAAGTTTGTAATTAGTTGTTGGGCGAAAATGTTATGATAAAAGCCATGGTCCGCTTGGTTATCAAAATTTATACGCTATCACCTCCATTTTTCTTGCGCTTCAGAGGGAGAGAGAGAAAAAAATGGGAAGTTTTCTTTCAGTTTGTTCGGCCCCTCCTCGCCCACCGCCGAAGCTGCCTCATCGGAGCCGTCGTCGGTTAAGGAGTGCGGCTTGATGGAAACTCCTCTTCAATTCCCTTCAGGAAACTTCCAAGCTCGTAAGCATCTATTTCTACTTTTTTTTTTCCCAATTCCCACTGATTTGATGGAACGCCATTTTTCTGGGGTTCCTGTTTCTAATATATTGCTGATCTCTTATCTTTCTTCTCACTTCCTTCAATTTGTTGGACTGTGGGCGAGTAGATGGTGATTGATTTCTCCGCAACTTAGTGTGGACCCTGTAAGCTCATGGAGCCAGCCTTCAACGCCATGGCTGAAAAATACACCGATGTTGAGTTCGCTAGAATCGATGTCCGACGAGATAGCTGTACGTCTCTCTCCTTCTTCACTTGGAGTGATTATAGACAATCCTTAGAGAATTATCAAAGTTTATTAGAGGAATTAGGCATATAAGAGAGCAAAAAGTTGCAATTTTTGCCAATTTCTTTGAAACTGGAAGGAGAAATATAAGAGACTTTCCTCCCATCCTAGATAAGATGTCATTTAAGTTTAGTTCATCATAGGCCAATGTCAATGTAACGCCCCAAATTTTCAAGCTAAACTTTTACCACCTTATTTAATTTTTAGGGAATTTTAAATTTTGGATTAATTTCTGAAATTTTGGAATTTTTAATTGTAAATTTATATAATAATAATATAATAGTAATTATATTATTATTATTCTTATTATTAATTATTATAAGCTTTATATGTAATTTAATATTAATAATATCCTTTATTTTGTTATTATTAGTATTATTATAATTATTATTTAATTATACAAAAGTTAATACATATATATATAATAATATTTTATATATATTATTATTAGTAATTAGAATTATTAGAGTTGATATATATACATTTAATAATGTTTTATTTATTGTTATTATTATTATTTTTTTTTATTTTTTTTTATTTTATTATTATTATTATTATTAATTTCTTAATTTAATATATATATATATATTTTTTTTAAAAAAAAAGGGAGAGGAGGAAACCTACTGCGCGCGAGTCCCCCCCATCCGTTTTCATCTCTTCCTTGCGCCGCCGCCATCCACCGTCTCCATCTCTTTCTTCTTCATTTCTGCGTCATCGCCGCGTCTCTCCGTCTTCTCTTCCGCACGCGTCTCCATCATCCATCCTCTCCGTCTCCGTCCTCTGTCCCTATCTCCATCTCCGTCGGCGTTCTTAGCTTCGCCGGACGTTCGCCGCAGCCACCATCCGCAAGTCGCGCCGCCTGCCGTCCACCTACAGCCGACGTTTCTCCCTCTCTCCCTCTTCGTTTCTGCCACCGCCAGCATCCTCTCCGTCATCATCTCGTGTTTCCGACGCCGACAGAACACAGAGGGGAGCGCCGTCGTCGCCGGAAGGGGGAAGGGATACACGAGCCGTGAAGTGAAGCCGACCCGAGAACCCATTTCCAAGCTGACCCGACCCGAGAACCCATTTCCAAGCTGACCCGACCCGAGACCAATTCCAGCCGAGCCGCGAGCCGCAAGCAAATTCAGCCGAGCCGAGTAGCGATCCGAGCCAAGCCGCGAGCCGCGAGCCGAATCAAGCCGAGGACCTAGCCGAGCCGCCGAGCCGCGAGCCGAGTCAAGCCGAAGACCGAGCCGAGCCGAGTCGAGCCGAGCCGAGCCGAGGCCAAGCCGAGCCGAGCCGAGTTGAGCCGAGTTGTGAGCCGAGGCCAAGCCGAGCCGAGCCGAGAGTGAGCCGAGCCGTGAGCCAAGGCCAAGCCGAGCCGAGCCGAGAGTGAGCCGAGCCGAGCCGAGCCACCTAAGCCTTCCTCCCTCCACTTCGGGTCACGGTGAGTTTTCGGTAAGGATTGTTTTCGATGAATTCCCTAATGTTGCTACATCCGATTCGAGTTTGAATATTGGAATAAGATATGGCCCTACTTTTCTCCCTTGAAGGTAGTAAGGAGTTGACGCTTAAGTTCTCGGGTCCCGCGGCAGGCTTGTTTGGAGATAGCTTTCCTTTCCTTGGGTAAGTCAACGGGTGTCGTTTCGGACCTTTTAAAACGACTTCTACTAGAGTCATCAACTAAAATCTTTGTGTTTTCGTTTAGGTTGATCCGCTGAGCGTGGATTCGATCGAGGGGCATAACCGAGTATCAGGTAAGGATTTTCCTACTACTGGACCTCGGATCGAGGCTGAAAACGTAGTAATCCACAGGGGATTACACGTTAGTGACTGTACTGAATAACTGTATGTGTGTTGACTGTTAAGCACTGTTATTATATTTTGTCTGTTGTAAAGGTACTGTGACTGCTAATTGTAGATTGGGATTTTATGTTGATGGACCTTGAAGTTACGGTTCAGTATGTAGTAATCATTGGTCTGGATGTTGATCATGGAGTTTGGACGGGGAAGGACAATGAGTCCGGCTTTGGTTGGTTAGTTGGTTGGGTCTAGGGTTTTCCCTAATGGTGTGCGAATTGGTGATGCGTATAGCAACTGAGGGTGTAGTTGTTTAAACCTATACTATCTGACTGACAAAGCCTATGGCGGAACTGTAATATGAATGCCGTTGGGGTGTGACTGATGTAGACGGTTTAGTATGGACTGAGGGGTAACGGTTAGCTTCATCTATGGGGTAGTGTGCCTTACGGATAGGTGCATCCTTCGGGAGCACTAGACTGATACGTGCATCCTTCGGGAGCACTAGACTGATACGTGCATCCTTCGGGAGCACTAGACTGATGTGTGCATCCTTCGGGAGCACTAGACTGATACGTGCATCCTTCGGGAGCACTAGACTGATATGTGCGTTCTACGGAACCACTAAACTGTTATGTAGGGTACCCCCGAATAGGAAGTTAACTGTTGTCCCCTAACGGGCCCAGTAGTGGGTCCCTTACTGGGTATGTTTATACTCACCCTTTTCTCTTCTTTAACTTTTCAGGTAAGGGCACAGCGAGGGGCAGACCGACGAGAGGCAGGAAGGACGCGTGAAGGCCATATGGACGCGTCTGGCTTTTCTTATCGCTTCCGCTATGTATTTTGTCAGAATATTTGACTTGTGATTTTGAACTGATGACTTGAGTTTTTATTTGAGACTTTTTATGATTGATTTAAAATAGGGCCCGAAAATGTCTTTTTGTAAGGTTTCTAATGCTTTAATGAATCGTAACTGGTCCGTTTTAAATTTTGTGTTGAATGGTCGAGTTTTGGTATTTGGTAGTGACCTCAGCTTAGTCCGGAAAGTTGGGTCGTTACAGTTGGTATCAGAGCCTAAGTTTTAGGTTCTGTAGACTGGCTTATAATGTGAGTCTATGTTTTGTGTCCTTATGGCTGAAACGATCCTTGCCGCTCGTCAGGTACGCTCCCATGAAAGTATATGTATAACTCTACATGCATTACCTTACCTAAGTTAAACTGCAAATTCAATTACCATTTATGACTAAAGGGATCGTTGGTGGTTGTTAGGGAAATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCTAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTCAGAGATTTGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCACCAGCTCCTGCTCCAGCTCCGGCTCCAGTACCAGTTGCGCCCCAGTTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGAATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTTAAGGAGAGTTTCTATGCGAAATTCTTCTCCGCTAGTTTGAGAGACGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTTCGACTGGACATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGACCGCTGGTAGAGGTTCGACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAATGCCACAGCGAAATTTCAGATCAGGTGGTGAATTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCATCATCTGGGCCGTTGCTTGTTCGGGACCAGGACTTGCTTTAAGTGTAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTTACGGGGAACGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAAGACTGAGGCTGAGAAGGCAGGCACGGTAGTGACAGGTACGCTTCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCTTCCGCATTTGTGTTGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTATCAGTATCTACTCCTTCCAGGGAATGTATGTTGTCGAAGGAAAAGGTGAAAGCATGCCAGATTGCGATAGCAGGCCATGTGGTTGAAGTAACGCTGATAGTCCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAACCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCGTCGGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCGGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAATTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGGAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTCGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTACGCAAAGTTCTCGAAGTGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGGGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGACGGTTCTGGCAGTTTTGTGATTCATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTCTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAAAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTTTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCATTATCCTCTGATGGTGGACTTTTGTTCGAGAGACGCCTCTGTGTGCCGTCGGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAGCCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGGCTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTAGGTGAGCAGAGATTGATGGGCCCTGAGTTAGTTCAGTCTACTAACGAAGCGATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATACAGATGTGAGGCGGAAGGATCTTGAGTTTGAGATAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGAGTCTTACGATTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCCCCATCACTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAGATTGATGAAAACTTGAGCTATGTTGAACAACCCGTTGAGGTGCTTGCTAGAGAGGTGAAGACGTTGAGGAATAAAGAAATTCCCCTGGTTAAAGTCTTATGGCGGAATCACCGGGTAGAAGAGGCTACATGGGAGCGAGAAGATGACATGAGGTCCCGTTATCCCGATCTGTTCGAGGAGTGAAACTTTCGAGGACGAAAGTTCCCTAAGGAGGGAAGAATGTAACGCCCCAAATTTTCGAGGTAAACTTTTACCGCCTTATTTAATTTTTAGGGAATTTTAAATTTTGGATTAATTTCTGAAATTCTGGAATTTTTAGTTGTAAATTTATATAATAATAATATAATAGTAATTATATTATTATTATTATTATTATTAATTATTATAAGCTTTATATGTAATTTAATATTAATAATATCCTTTATTTTGTTATTATTAGTATTATTATAATTATTATTTAATTATACAAAAGTTAATACATATATATATAATAATATTTTATATATATTATTATTAGTAATTAGAATTATTAGAGTTAATATATATACATTTAATAATGTTTTATTTATTGTTATTATTATTATTATTATTATTATTATTTATTTTTTTTATTTTATTATTATTATTATTATTAATTTCTTAATTTAATATATATATATATATATATATATATATATATTTAAAAAAAAAAGGGAGAGGAGGAACCCTACTGCGCGCGAGTCCCCCCCCCCCATCCGTTTTCATCTCTTCCTTGCGCCGCCGCCATCCACCGTCTCCATCTCTTTCTTCTTCATTTCTGCATCATCGCCGCGTCTCTCCGTCTTCTCTTCCGCACGCGTCTCCATCATCCATCCTCTCCGTCTCCGTCCTCTGTCCCTATCTCCATCTCCGTCGGCGTTCTTAGCTTCGCCGGACGTTCGCCGCAGCCACCATCCGCAAGTCGCGCCGCCTGCCGTCCACCTACAGCCGACGTTTCTCCCTCTCTCCCTCTTCGTTTCTGCCACCGCCGGCATCCTCTCCGTCATCATCTCGTGTTTCCGACGCCGACAGAACACAGAGGGGAGCGCCGTCGTCGCCGGAAGGGGGAAGGGATACACGAGCCGTGAAGTGAAGCCGACCCGAGAACCCATTTCCAAGCTGACCCGACCCGAGAACCCATTTCCAAGCTGACCCGACCTGAGACCAATTCCAGCCGAGCCGCGAGCCGCAAGCAAATCCAGCCGAGCCGAGTAGCGATCCGAGCCAAGCCGCGAGCCGCGAGCCGAGGCAAGCCGAAGACCAAGCCGAGTCAAGCCGCGAGCCGAGCCGCGAGCCGAATCAAGCCGAGGACCTAGCCGAGCCGCCGAGCCGCGAGCCGAGTCAAGCCGAAGACCGAGCCGAGCCGAGTCGAGCCGAGCCGAGCCGAGGCCAAGCCGAGCCGAGCCGAGTTGAGCCGAGTTGTGAGCCGAGGCCAAGCCGAGCCGAGCCGAGAGTGAGCCGAGCCGTGAGCCAAGGCCAAGCCGAGCCGAGCCGAGAGTGAGCCGAGCCGAGCCGAGCCACCTAAGCCTTCCTCCCTCCACTTCGGGTCACGGTGAGTTTTCGGTAAGGATTGTTTTCGATGAATTCCCTAATGTTGCTACATCCGATTCGAGTTTGAATATTGGAATAAGATATGGCCCTACTTTTCTCCCTTGAAGGTAGTAAGGAGTTGACGCTTAAGTTCTCGGGTCCCGCGGCAGGCTTGTTTGGAGATAGCTTTCCTTTCCTTGGGTAAGTCAACGGGTGTCGTTTCGGACCTTTTAAAACGACTTCTACTAGAGTCATCAACTAAAATCTTTGTGTTTTCGTTTAGGTTGATCCGCTGAGCGTGGATTCGATCGAGGGGCATAACCGAGTATCAGGTAAGGATTTTCCTACTACTGGACCTCGGATCGAGGCTGAAAACGTAGTAATCCACAGGGGATTACACGTTAGTGACTGTACTGAATAACTGTATGTGTGTTGACTGTTAAGCACTGTTATTATATTTTGTCTGTTGTAAAGGTACTGTGACTGCTAATTGTAGATTGGGATTTTATGTTGATGGACCTTGAAGTTACGGTTCAGTATGTAGTAATCATTGGTCTGGATGTTGATCATGGAGTTTGGACGGGGAAGGACAATGAGTCCGGCTTTGGTTGGTTAGTTGGTTGGGTCTAGGGTTTTCCCTAATGGTGTGCGAATTGGTGATGCGTATAGCAACTGAGGGTGTAGTTGTTTAAACCTATACTATCTGACTGACAAAGCCTATGGCGGAACTGTAATATGAATGCCGTTGGGGTGTGACTGATGTAGACGGTTTAGTATGGACTGAGGGGTAACGGTTAGCTTCATCTATGGGGTAGTGTGCCTTACGGATAGGTGCATCCTTCGGGAGCACTAGACTGATACGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACTGATGTGTGCATCCTTCGGGAGCACTAGACTGATACGTGCATCCTTCGGGAGCACTGGACTGATATGTGCGTTCTACGGAACCACTAGACTGTTATGTAGGGTACCCCCGAATAGGAAGTTAACTGTTGTCCCCTAACGGGCCCAGTAGTGGGTCCCTTACTGGGTATGTTTATACTCACCCTTTTCTCTTCTTTAACTTTTCAGGTAAGGGCACAGCGAGGGGCAGACCGACGAGAGGCAGGAAGGACGCGTGAAGGCCATATGGACGCGTCTGGCTTTTCTTATCGCTTCCGCTATGTATTTTGTCAGAATATTTGACTTGTGATTTTGAACTGATGACTTGAGTTTTTATTTGAGACTTTTTATGATTGATTTAAAATAGGGCCCGAAAATGTCTTTTTGTAAGGTTTCTAATGCTTTAATGAATCGTAACTG

mRNA sequence

TTTGAATATTTAGTTTGAATTTTTATATGTTGTTCTCAGTGGACGACTGTTACTCGAGACGACTTCTCTTGTTGAGTATCAATAAAGATTTTTTTCCTCGAGTATAATTTATATTTTTGTAAGAATATTCTCTAAGTTTGTAATTAGTTGTTGGGCGAAAATGTTATGATAAAAGCCATGGTCCGCTTGGTTATCAAAATTTATACGCTATCACCTCCATTTTTCTTGCGCTTCAGAGGGAGAGAGAGAAAAAAATGGGAAGTTTTCTTTCAGTTTGTTCGGCCCCTCCTCGCCCACCGCCGAAGCTGCCTCATCGGAGCCGTCGTCGGTTAAGGAGTGCGGCTTGATGGAAACTCCTCTTCAATTCCCTTCAGGAAACTTCCAAGCTCATGGTGATTGATTTCTCCGCAACTTAGTGTGGACCCTGTAAGCTCATGGAGCCAGCCTTCAACGCCATGGCTGAAAAATACACCGATGTTGAGTTCGCTAGAATCGATGTCCGACGAGATAGCTGGAAATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCTAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTCAGAGATTTGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCACCAGCTCCTGCTCCAGCTCCGGCTCCAGTACCAGTTGCGCCCCAGTTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGAATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTTAAGGAGAGTTTCTATGCGAAATTCTTCTCCGCTAGTTTGAGAGACGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTTCGACTGGACATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGACCGCTGGTAGAGGTTCGACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAATGCCACAGCGAAATTTCAGATCAGGTGGTGAATTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCATCATCTGGGCCGTTGCTTGTTCGGGACCAGGACTTGCTTTAAGTGTAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTTACGGGGAACGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAAGACTGAGGCTGAGAAGGCAGGCACGGTAGTGACAGGTAAGGGCACAGCGAGGGGCAGACCGACGAGAGGCAGGAAGGACGCGTGAAGGCCATATGGACGCGTCTGGCTTTTCTTATCGCTTCCGCTATGTATTTTGTCAGAATATTTGACTTGTGATTTTGAACTGATGACTTGAGTTTTTATTTGAGACTTTTTATGATTGATTTAAAATAGGGCCCGAAAATGTCTTTTTGTAAGGTTTCTAATGCTTTAATGAATCGTAACTG

Coding sequence (CDS)

ATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCTAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTCAGAGATTTGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCACCAGCTCCTGCTCCAGCTCCGGCTCCAGTACCAGTTGCGCCCCAGTTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGAATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTTAAGGAGAGTTTCTATGCGAAATTCTTCTCCGCTAGTTTGAGAGACGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTTCGACTGGACATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGACCGCTGGTAGAGGTTCGACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAATGCCACAGCGAAATTTCAGATCAGGTGGTGAATTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCATCATCTGGGCCGTTGCTTGTTCGGGACCAGGACTTGCTTTAAGTGTAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTTACGGGGAACGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAAGACTGAGGCTGAGAAGGCAGGCACGGTAGTGACAGGTAAGGGCACAGCGAGGGGCAGACCGACGAGAGGCAGGAAGGACGCGTGA

Protein sequence

MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGKGTARGRPTRGRKDA

Homology

[Close]

BLAST of Cmc04g0111501 vs. NCBI nr
Match: KAA0039053.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 775.0 bits (2000), Expect = 3.2e-220
Identity = 393/399 (98.50%), Postives = 395/399 (99.00%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDP A VTHADLAAMEQRFRDLIMQMRE
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPGAPVTHADLAAMEQRFRDLIMQMRE 60

Query: 61  QQKPASPTPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP 120
           QQKPASP PAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP
Sbjct: 61  QQKPASPAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP 120

Query: 121 TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK 180
           TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK
Sbjct: 121 TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK 180

Query: 181 ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR 240
           ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR
Sbjct: 181 ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR 240

Query: 241 GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPMP 300
           GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVP+P
Sbjct: 241 GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVP 300

Query: 301 QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADR 360
           QR+FRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFG RTCFKCRQEGHTADR
Sbjct: 301 QRDFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGIRTCFKCRQEGHTADR 360

Query: 361 CPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 400
           CPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG
Sbjct: 361 CPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 399

[Close]

BLAST of Cmc04g0111501 vs. NCBI nr
Match: KAA0040689.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 773.5 bits (1996), Expect = 9.4e-220
Identity = 393/399 (98.50%), Postives = 395/399 (99.00%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAA VTHADLAAMEQRFRDLIMQMRE
Sbjct: 168 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 227

Query: 61  QQKPASPTPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP 120
           QQKPASPTPAPAPAP PAPA APVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP
Sbjct: 228 QQKPASPTPAPAPAPGPAPASAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP 287

Query: 121 TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK 180
           TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK
Sbjct: 288 TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK 347

Query: 181 ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR 240
           ESFYAKFFSASLRDAKRQEFLNL+QGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR
Sbjct: 348 ESFYAKFFSASLRDAKRQEFLNLKQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR 407

Query: 241 GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPMP 300
           GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVP+P
Sbjct: 408 GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVP 467

Query: 301 QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADR 360
           QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADR
Sbjct: 468 QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADR 527

Query: 361 CPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 400
           CPLRLTGNAQNQ AGAPHQGRVFATNKTEAEKAGTVVTG
Sbjct: 528 CPLRLTGNAQNQRAGAPHQGRVFATNKTEAEKAGTVVTG 566

[Close]

BLAST of Cmc04g0111501 vs. NCBI nr
Match: KAA0043391.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 772.3 bits (1993), Expect = 2.1e-219
Identity = 394/403 (97.77%), Postives = 397/403 (98.51%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAA VTHADLAAMEQRFRDLIMQMRE
Sbjct: 300 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 359

Query: 61  QQKPASPT----PAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPT    PAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 360 QQKPASPTPASAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 419

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 420 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 479

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLN+EQG+MTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 480 QQFKESFYAKFFSASLRDAKRQEFLNIEQGEMTVEQYDAEFDMLSRFAPEMIATEAARAD 539

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Sbjct: 540 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQP 599

Query: 301 VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
           VP+PQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 600 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 659

Query: 361 TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 400
           TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG
Sbjct: 660 TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 702

[Close]

BLAST of Cmc04g0111501 vs. NCBI nr
Match: KAA0062112.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 771.2 bits (1990), Expect = 4.7e-219
Identity = 393/403 (97.52%), Postives = 397/403 (98.51%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRG+GAGRVQPEVQPVAQAP+PAA VTHADLAAMEQRFRDLIMQMRE
Sbjct: 76  MPPRRGARRGGRGGRGKGAGRVQPEVQPVAQAPNPAAPVTHADLAAMEQRFRDLIMQMRE 135

Query: 61  QQKPASPTPAPAPAPAPA----PAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPTPAPAPAPAPA    PAPAPVPVAPQF+PDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 136 QQKPASPTPAPAPAPAPAPALVPAPAPVPVAPQFMPDQLSAEAKHLRDFRKYNPTTFDGS 195

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 196 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 255

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 256 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 315

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKT GRGSTSGQKRKAEQQP
Sbjct: 316 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTVGRGSTSGQKRKAEQQP 375

Query: 301 VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
           VP+PQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 376 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 435

Query: 361 TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 400
           TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG
Sbjct: 436 TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 478

[Close]

BLAST of Cmc04g0111501 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 769.2 bits (1985), Expect = 1.8e-218
Identity = 394/403 (97.77%), Postives = 395/403 (98.01%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAA VTHADLAAMEQRFRDLIMQMRE
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60

Query: 61  QQKPASPTPAPAPAPAPAPAP----APVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPTPAPAPAPAPAPAP    APVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61  QQKPASPTPAPAPAPAPAPAPAPALAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQP 300

Query: 301 VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
           VP+PQRNFRSGGEFRRFQQKPFEAGEAAR KPLCT CGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARWKPLCTICGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361 TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 400
           TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG
Sbjct: 361 TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 403

[Close]

BLAST of Cmc04g0111501 vs. ExPASy TrEMBL
Match: A0A5A7T7V8 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001480 PE=4 SV=1)

HSP 1 Score: 775.0 bits (2000), Expect = 1.6e-220
Identity = 393/399 (98.50%), Postives = 395/399 (99.00%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDP A VTHADLAAMEQRFRDLIMQMRE
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPGAPVTHADLAAMEQRFRDLIMQMRE 60

Query: 61  QQKPASPTPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP 120
           QQKPASP PAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP
Sbjct: 61  QQKPASPAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP 120

Query: 121 TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK 180
           TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK
Sbjct: 121 TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK 180

Query: 181 ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR 240
           ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR
Sbjct: 181 ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR 240

Query: 241 GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPMP 300
           GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVP+P
Sbjct: 241 GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVP 300

Query: 301 QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADR 360
           QR+FRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFG RTCFKCRQEGHTADR
Sbjct: 301 QRDFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGIRTCFKCRQEGHTADR 360

Query: 361 CPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 400
           CPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG
Sbjct: 361 CPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 399

[Close]

BLAST of Cmc04g0111501 vs. ExPASy TrEMBL
Match: A0A5A7THE6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00030 PE=4 SV=1)

HSP 1 Score: 773.5 bits (1996), Expect = 4.5e-220
Identity = 393/399 (98.50%), Postives = 395/399 (99.00%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAA VTHADLAAMEQRFRDLIMQMRE
Sbjct: 168 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 227

Query: 61  QQKPASPTPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP 120
           QQKPASPTPAPAPAP PAPA APVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP
Sbjct: 228 QQKPASPTPAPAPAPGPAPASAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP 287

Query: 121 TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK 180
           TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK
Sbjct: 288 TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK 347

Query: 181 ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR 240
           ESFYAKFFSASLRDAKRQEFLNL+QGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR
Sbjct: 348 ESFYAKFFSASLRDAKRQEFLNLKQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR 407

Query: 241 GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPMP 300
           GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVP+P
Sbjct: 408 GLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVP 467

Query: 301 QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADR 360
           QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADR
Sbjct: 468 QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADR 527

Query: 361 CPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 400
           CPLRLTGNAQNQ AGAPHQGRVFATNKTEAEKAGTVVTG
Sbjct: 528 CPLRLTGNAQNQRAGAPHQGRVFATNKTEAEKAGTVVTG 566

[Close]

BLAST of Cmc04g0111501 vs. ExPASy TrEMBL
Match: A0A5A7TP96 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00630 PE=4 SV=1)

HSP 1 Score: 772.3 bits (1993), Expect = 1.0e-219
Identity = 394/403 (97.77%), Postives = 397/403 (98.51%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAA VTHADLAAMEQRFRDLIMQMRE
Sbjct: 300 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 359

Query: 61  QQKPASPT----PAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPT    PAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 360 QQKPASPTPASAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 419

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 420 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 479

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLN+EQG+MTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 480 QQFKESFYAKFFSASLRDAKRQEFLNIEQGEMTVEQYDAEFDMLSRFAPEMIATEAARAD 539

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Sbjct: 540 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQP 599

Query: 301 VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
           VP+PQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 600 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 659

Query: 361 TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 400
           TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG
Sbjct: 660 TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 702

[Close]

BLAST of Cmc04g0111501 vs. ExPASy TrEMBL
Match: A0A5A7V1N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004680 PE=4 SV=1)

HSP 1 Score: 771.2 bits (1990), Expect = 2.3e-219
Identity = 393/403 (97.52%), Postives = 397/403 (98.51%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRG+GAGRVQPEVQPVAQAP+PAA VTHADLAAMEQRFRDLIMQMRE
Sbjct: 76  MPPRRGARRGGRGGRGKGAGRVQPEVQPVAQAPNPAAPVTHADLAAMEQRFRDLIMQMRE 135

Query: 61  QQKPASPTPAPAPAPAPA----PAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPTPAPAPAPAPA    PAPAPVPVAPQF+PDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 136 QQKPASPTPAPAPAPAPAPALVPAPAPVPVAPQFMPDQLSAEAKHLRDFRKYNPTTFDGS 195

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 196 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 255

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 256 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 315

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKT GRGSTSGQKRKAEQQP
Sbjct: 316 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTVGRGSTSGQKRKAEQQP 375

Query: 301 VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
           VP+PQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 376 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 435

Query: 361 TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 400
           TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG
Sbjct: 436 TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 478

[Close]

BLAST of Cmc04g0111501 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 769.2 bits (1985), Expect = 8.6e-219
Identity = 394/403 (97.77%), Postives = 395/403 (98.01%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAA VTHADLAAMEQRFRDLIMQMRE
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60

Query: 61  QQKPASPTPAPAPAPAPAPAP----APVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPTPAPAPAPAPAPAP    APVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61  QQKPASPTPAPAPAPAPAPAPAPALAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQP 300

Query: 301 VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
           VP+PQRNFRSGGEFRRFQQKPFEAGEAAR KPLCT CGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARWKPLCTICGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361 TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 400
           TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG
Sbjct: 361 TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG 403

The following BLAST results are available for this feature:

BLAST of Cmc04g0111501 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039053.1	3.2e-220	98.50	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0040689.1	9.4e-220	98.50	pol protein [Cucumis melo var. makuwa]	[more]
KAA0043391.1	2.1e-219	97.77	pol protein [Cucumis melo var. makuwa]	[more]
KAA0062112.1	4.7e-219	97.52	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	1.8e-218	97.77	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0111501 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc04g0111501 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T7V8	1.6e-220	98.50	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7THE6	4.5e-220	98.50	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold52...	[more]
A0A5A7TP96	1.0e-219	97.77	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold58...	[more]
A0A5A7V1N3	2.3e-219	97.52	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89...	[more]
A0A5A7U330	8.6e-219	97.77	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]

BLAST of Cmc04g0111501 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 147..243 e-value: 5.8E-16 score: 58.6
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 346..362 e-value: 2.7E-4 score: 20.9
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 348..362 score: 9.438442
None	No IPR available	GENE3D	4.10.60.10		coord: 273..372 e-value: 4.7E-5 score: 25.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 387..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..292
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 118..366
None	No IPR available	PANTHER	PTHR34482:SF4	POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 118..366
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 344..367

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0111501.1	Cmc04g0111501.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding