Cmc04g0111381 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0111381
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr04: 30499207 .. 30501900 (+)
RNA-Seq ExpressionCmc04g0111381
SyntenyCmc04g0111381
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTACCAAAATGATAAATAACCTAATACAAAATGGACATATTTGGCAATTAATACAATCTTGTTAAAAACATACAAGTCATAATTAAGGTCTTCTTGGTAATCCCATCATTCACTTCCTCTTTGTTGAAATTCACATATACTTTAACCGAAGGAGGAAATATATATTTTTCATGTCATTAAAACGTTTGCCATTCATAAGTCTAAACTCAGAATTAGAATATGGTAAACCAAGAATCAAAAGTCATAACATTACATAATCAATCATGAGCATTGGCTACTACAGTCTGATAAACCATTTTCTTTTATCAACACAACAATCCAGTCTACAAATAATGCAACTACAATGCTATACGAATTACAAATCTTTCTTCTTCTTCTTTTTTTTTTTTTACTAATCTAAACCTTCAATAACCCACTAAATTGAAATGCGCATACGTACACACAGACACAAATAAAGTCTAGGTGTACAAAATCCTCGTACATTGCTATTCTTTTTCAATTGTTCTGCTTTTTCTCCACATGACCATTCTCCTTCACCTCTGTTGTTGCAACCCCATTGCATTTACTACAATATTCCTTCTTCTCACCCGATTCTTCTTCTTTCTTCTTCTCCTTTTCCCTTTTAGCAGCTTCTGCTTCTTCCTCAGCTTTCTTCTTCTCCTCTTTTTCCTTCTCCTCCTTCTCTTTCTCTGCCATTTTTGCAGCTTCAGCTTCCTCCTCTGCTTTCTTCTTATCAGCTGCCACTTTTGCATCCTCAAGTCCTTTAATCAATCTCTTCAAACACTCGCCTGTTTCTTCCCCTTCATATTTTGGCATCAAATTCTCTGCCACGTCTGCCGGTGTCATTTCAATGTTTTCTAGCATCTCCTTAATTTTATCGTATGAATCATCCCATTCAACATCCAAGTAATTCATTGCAAGAACTTTGAATGCTTCGAAACCACAATAAGACATCTCTATATGTTTGTCCATTCTTCCTCTTCTTATCAAAGCTTCGTCAAGCTTTTCCTTATGATTCGTCGTGAAAATAATCAACCTCTCTCCACCACACGCTGACCAAATTCCGTCGATGAAATTCAACAGCCCAGAAAGCGTCACTTTGCTCTCTTTCTTCTCTTCCTCTTTAGCCTTCTTCTCAATCTCCTTCTTCGCTTCATCTCCCTCCTCCTCTGTTTTCTTCTTCTTCTTCCGTTGCCCGGTAAGATCAAGTGAACAATCAATATCCTCTATCACAATAATCGATTTATTCGTAATCTCGATCAACAACTTCTTCAACTCTGTATTATCCTTAACAGACGTCAGCTCAAGATCATAAACATCGTACTCCATGAAATTGGCCATGGCAGCGATCATGGTGGATTTCCCTGTTCCTGGTGGACCGTAGAGAAGATACCCACGTTTCCAAGCCTTCCCTACTTTCTCATAATACTCTTTCCCATTCTTAAACTTCACTAAATCATTCACAATCTCTTGTTTCTTCTTCGGATCCATAGCCAGAGTACGGAAATTCGCTGGATGCTCAAAAGGGACATGTCTCCAACTACTTTTATGCCACCAATTCGTACTGGAATTGTTCATATAAAGCTTCCTCTGCCGGTTTTTCTGCTCCACGGCCTTTCCTTCTTCCATAATATGATTAATAAAAGAGTCAAGAATGGTTTCTCTGTGTCGCCGGTGAAACGTCAGTTTGTAAAACCGTCTCTCGTCGGAAGTAGGGTAGTAAGATATACTCTGAGTTTTGGGTACGGTTTTACTAGAAGTCCACCAAATCTTAACACCATTAAATTCATCAATAACTTCTTCATTATCATCCATACTAAGAACCAAAGATTTTCTATTTTTGACCGCCTCTGCCTTCAGACGCTTAGCTCGAATTGAGCTTCGTGAACTGAGGTAATTCTGAATAGCGGTAAAGGCTTCACTTTTCCGAAGACGCTCGCCGGTGTACTCAGGGAAAGTGATTGTGATGTAAGGATTGAGAAACCCAATAAATTTGTGAGCGTATCGTTCGATGTGGGCACGAAGACGGTAAGGGAAGTATTGTTGGATGATTGCCCAAACGAACATGGAGGTCGCCATTAAAGATCCAACATTGTTCCAGAGCTGTCCCATGGGCATTGGGGTCATGTTTGATTGAGAAAATTGTGGAATTTGAAGGTTTTCTGGTGGAGAAATTGAGGAGGAAAAGGCAGGTTTAAATAAGAAGAGGACGGGAATTTTGTAGCAGAGTGGAAGTCTTTGTTTAAGAAGACTAAGAACTCACCATTTTCGTCAGCATGTGGAATTTGTAAAAGCTTATGATTATAATTTTGCTATTAATTAAGGAAACTTCGTTTTCTACTTTCATGGCGGCTAACATCCCCTATTAAAAAGTAATTGGAGAGCAAAATCACGCGCATTCCAATGTTTGACTGTAAAGAAGAGAAATGCATCACTGGATATGTAAAGGTGAAATTTATGGTCATACAGAAATTTCAATACTATCTTCCTTCTCTCAATCTTTTGGTATCTTGCTTCCGGTGACGACCCATTTGCAAATTCCATTGAACATAATGTTTCCCCTCTCTCAATCTCTCACTCTTGCTCTCTCGATGACTATCCATTTGTGAATACCATTGAGCATGGTATCTTTCCCTCTCAATGCCTCTGGCTCTCATTGAGGAAAATTGAACGAAGGAGGGACTCTCGCTCTC

mRNA sequence

TTTACCAAAATGATAAATAACCTAATACAAAATGGACATATTTGGCAATTAATACAATCTTGTTAAAAACATACAAGTCATAATTAAGGTCTTCTTGGTAATCCCATCATTCACTTCCTCTTTGTTGAAATTCACATATACTTTAACCGAAGGAGGAAATATATATTTTTCATGTCATTAAAACGTTTGCCATTCATAAGTCTAAACTCAGAATTAGAATATGGTAAACCAAGAATCAAAAGTCATAACATTACATAATCAATCATGAGCATTGGCTACTACAGTCTGATAAACCATTTTCTTTTATCAACACAACAATCCAGTCTACAAATAATGCAACTACAATGCTATACGAATTACAAATCTTTCTTCTTCTTCTTTTTTTTTTTTTACTAATCTAAACCTTCAATAACCCACTAAATTGAAATGCGCATACGTACACACAGACACAAATAAAGTCTAGGTGTACAAAATCCTCGTACATTGCTATTCTTTTTCAATTGTTCTGCTTTTTCTCCACATGACCATTCTCCTTCACCTCTGTTGTTGCAACCCCATTGCATTTACTACAATATTCCTTCTTCTCACCCGATTCTTCTTCTTTCTTCTTCTCCTTTTCCCTTTTAGCAGCTTCTGCTTCTTCCTCAGCTTTCTTCTTCTCCTCTTTTTCCTTCTCCTCCTTCTCTTTCTCTGCCATTTTTGCAGCTTCAGCTTCCTCCTCTGCTTTCTTCTTATCAGCTGCCACTTTTGCATCCTCAAGTCCTTTAATCAATCTCTTCAAACACTCGCCTGTTTCTTCCCCTTCATATTTTGGCATCAAATTCTCTGCCACGTCTGCCGGTGTCATTTCAATGTTTTCTAGCATCTCCTTAATTTTATCGTATGAATCATCCCATTCAACATCCAAGTAATTCATTGCAAGAACTTTGAATGCTTCGAAACCACAATAAGACATCTCTATATGTTTGTCCATTCTTCCTCTTCTTATCAAAGCTTCGTCAAGCTTTTCCTTATGATTCGTCGTGAAAATAATCAACCTCTCTCCACCACACGCTGACCAAATTCCGTCGATGAAATTCAACAGCCCAGAAAGCGTCACTTTGCTCTCTTTCTTCTCTTCCTCTTTAGCCTTCTTCTCAATCTCCTTCTTCGCTTCATCTCCCTCCTCCTCTGTTTTCTTCTTCTTCTTCCGTTGCCCGGTAAGATCAAGTGAACAATCAATATCCTCTATCACAATAATCGATTTATTCGTAATCTCGATCAACAACTTCTTCAACTCTGTATTATCCTTAACAGACGTCAGCTCAAGATCATAAACATCGTACTCCATGAAATTGGCCATGGCAGCGATCATGGTGGATTTCCCTGTTCCTGGTGGACCGTAGAGAAGATACCCACGTTTCCAAGCCTTCCCTACTTTCTCATAATACTCTTTCCCATTCTTAAACTTCACTAAATCATTCACAATCTCTTGTTTCTTCTTCGGATCCATAGCCAGAGTACGGAAATTCGCTGGATGCTCAAAAGGGACATGTCTCCAACTACTTTTATGCCACCAATTCGTACTGGAATTGTTCATATAAAGCTTCCTCTGCCGGTTTTTCTGCTCCACGGCCTTTCCTTCTTCCATAATATGATTAATAAAAGAGTCAAGAATGGTTTCTCTGTGTCGCCGGTGAAACGTCAGTTTGTAAAACCGTCTCTCGTCGGAAGTAGGGTAGTAAGATATACTCTGAGTTTTGGGTACGGTTTTACTAGAAGTCCACCAAATCTTAACACCATTAAATTCATCAATAACTTCTTCATTATCATCCATACTAAGAACCAAAGATTTTCTATTTTTGACCGCCTCTGCCTTCAGACGCTTAGCTCGAATTGAGCTTCGTGAACTGAGGTAATTCTGAATAGCGGTAAAGGCTTCACTTTTCCGAAGACGCTCGCCGGTGTACTCAGGGAAAGTGATTGTGATGTAAGGATTGAGAAACCCAATAAATTTGTGAGCGTATCGTTCGATGTGGGCACGAAGACGGTAAGGGAAGTATTGTTGGATGATTGCCCAAACGAACATGGAGGTCGCCATTAAAGATCCAACATTGTTCCAGAGCTGTCCCATGGGCATTGGGGTCATGTTTGATTGAGAAAATTGTGGAATTTGAAGGTTTTCTGGTGGAGAAATTGAGGAGGAAAAGGCAGGTTTAAATAAGAAGAGGACGGGAATTTTGTAGCAGAGTGGAAGTCTTTGTTTAAGAAGACTAAGAACTCACCATTTTCGTCAGCATGTGGAATTTGTAAAAGCTTATGATTATAATTTTGCTATTAATTAAGGAAACTTCGTTTTCTACTTTCATGGCGGCTAACATCCCCTATTAAAAAGTAATTGGAGAGCAAAATCACGCGCATTCCAATGTTTGACTGTAAAGAAGAGAAATGCATCACTGGATATGTAAAGGTGAAATTTATGGTCATACAGAAATTTCAATACTATCTTCCTTCTCTCAATCTTTTGGTATCTTGCTTCCGGTGACGACCCATTTGCAAATTCCATTGAACATAATGTTTCCCCTCTCTCAATCTCTCACTCTTGCTCTCTCGATGACTATCCATTTGTGAATACCATTGAGCATGGTATCTTTCCCTCTCAATGCCTCTGGCTCTCATTGAGGAAAATTGAACGAAGGAGGGACTCTCGCTCTC

Coding sequence (CDS)

ATGCTCAAAAGGGACATGTCTCCAACTACTTTTATGCCACCAATTCGTACTGGAATTGTTCATATAAAGCTTCCTCTGCCGGTTTTTCTGCTCCACGGCCTTTCCTTCTTCCATAATATGATTAATAAAAGAGTCAAGAATGGTTTCTCTGTGTCGCCGGTGAAACGTCAGTTTGTAAAACCGTCTCTCGTCGGAAGTAGGGTAGTAAGATATACTCTGAGTTTTGGGTACGGTTTTACTAGAAGTCCACCAAATCTTAACACCATTAAATTCATCAATAACTTCTTCATTATCATCCATACTAAGAACCAAAGATTTTCTATTTTTGACCGCCTCTGCCTTCAGACGCTTAGCTCGAATTGA

Protein sequence

MLKRDMSPTTFMPPIRTGIVHIKLPLPVFLLHGLSFFHNMINKRVKNGFSVSPVKRQFVKPSLVGSRVVRYTLSFGYGFTRSPPNLNTIKFINNFFIIIHTKNQRFSIFDRLCLQTLSSN
Homology
[Close]
BLAST of Cmc04g0111381 vs. NCBI nr
Match: KAG6580986.1 (hypothetical protein SDJN03_20988, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129.0 bits (323), Expect = 2.7e-26
Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 0 

Query: 1   MLKRDMSPTTFMPPIRTGIVHIKLPLPVFLLHGLSFFHNMINKRVKNGFSVSPVKRQFVK 60
           MLKR+M P  FMPP   GIVHIKLPLP+ LLH L+ F ++INKR KNG  VS V+ + V+
Sbjct: 1   MLKRNMPPIAFMPPFAIGIVHIKLPLPIPLLHRLALFPDVINKRPKNGVPVSAVESEMVE 60

Query: 61  PSLVGSRVVRYTLSFGYGFTRSPPNLNTIKFINNFFIIIHTKNQRFSIFDRLCLQTL 118
             L+G RV++   + G  F  SPP+ + IKFI NFF+IIHT+ QR +IFDRL  Q L
Sbjct: 61  SFLIGRRVMKNWFTCGRSFAGSPPDFDAIKFIGNFFVIIHTEYQRLAIFDRLSSQAL 117

[Close]
BLAST of Cmc04g0111381 vs. NCBI nr
Match: TYG93048.1 (hypothetical protein ES288_A11G079700v1 [Gossypium darwinii])

HSP 1 Score: 82.8 bits (203), Expect = 2.2e-12
Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 0 

Query: 12  MPPIRTGIVHIKLPLPVFLLHGLSFFHNMINKRVKNGFSVSPVKRQFVKPSLVGSRVVRY 71
           M PIR  IV IKLPLPV  L  L+FF NM   R  +   V  ++ + VKP L+  R+   
Sbjct: 1   MAPIRP-IVCIKLPLPVPYLDSLTFFQNMFEVRPDDQIPVFFMESKLVKPFLIRDRIESK 60

Query: 72  TLSFGYGFTRSPPNLNTIKFINNFFIIIHTKNQRFSIFDRLCLQTLS 119
            L F   F RSPP L T+KFI NFF++IH KNQR  +   +  ++LS
Sbjct: 61  RLCFANMFGRSPPQLYTLKFICNFFMVIHAKNQRLIVLHYVSFESLS 106

[Close]
BLAST of Cmc04g0111381 vs. NCBI nr
Match: KVH91654.1 (hypothetical protein Ccrd_006329 [Cynara cardunculus var. scolymus])

HSP 1 Score: 68.2 bits (165), Expect = 5.6e-08
Identity = 38/112 (33.93%), Postives = 60/112 (53.57%), Query Frame = 0 

Query: 8   PTTFMPPIRTGIVHIKLPLPVFLLHGLSFFHNMINKRVKNGFSVSPVKRQFVKPSLVGSR 67
           PTTF       +V I+LPLP    +GL+F  +M+     N  SV  +  + V+PS +   
Sbjct: 93  PTTF-----ALVVGIQLPLPGLYSNGLAFVEHMLQVNFSNDISVFAMASELVEPSFIIVM 152

Query: 68  VVRYTLSFGYGFTRSPPNLNTIKFINNFFIIIHTKNQRFSIFDRLCLQTLSS 120
           V +       GF  SPP+L+  + I+ FFII+HT++   ++FD +C +   S
Sbjct: 153 VRKERSLLWDGFAGSPPDLDAFELISYFFIIVHTEDDGLAVFDDVCFEAFGS 199

[Close]
BLAST of Cmc04g0111381 vs. ExPASy TrEMBL
Match: A0A5D2EJI7 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A11G079700v1 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12
Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 0 

Query: 12  MPPIRTGIVHIKLPLPVFLLHGLSFFHNMINKRVKNGFSVSPVKRQFVKPSLVGSRVVRY 71
           M PIR  IV IKLPLPV  L  L+FF NM   R  +   V  ++ + VKP L+  R+   
Sbjct: 1   MAPIRP-IVCIKLPLPVPYLDSLTFFQNMFEVRPDDQIPVFFMESKLVKPFLIRDRIESK 60

Query: 72  TLSFGYGFTRSPPNLNTIKFINNFFIIIHTKNQRFSIFDRLCLQTLS 119
            L F   F RSPP L T+KFI NFF++IH KNQR  +   +  ++LS
Sbjct: 61  RLCFANMFGRSPPQLYTLKFICNFFMVIHAKNQRLIVLHYVSFESLS 106

[Close]
BLAST of Cmc04g0111381 vs. ExPASy TrEMBL
Match: A0A103XJ57 (Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_006329 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.7e-08
Identity = 38/112 (33.93%), Postives = 60/112 (53.57%), Query Frame = 0 

Query: 8   PTTFMPPIRTGIVHIKLPLPVFLLHGLSFFHNMINKRVKNGFSVSPVKRQFVKPSLVGSR 67
           PTTF       +V I+LPLP    +GL+F  +M+     N  SV  +  + V+PS +   
Sbjct: 93  PTTF-----ALVVGIQLPLPGLYSNGLAFVEHMLQVNFSNDISVFAMASELVEPSFIIVM 152

Query: 68  VVRYTLSFGYGFTRSPPNLNTIKFINNFFIIIHTKNQRFSIFDRLCLQTLSS 120
           V +       GF  SPP+L+  + I+ FFII+HT++   ++FD +C +   S
Sbjct: 153 VRKERSLLWDGFAGSPPDLDAFELISYFFIIVHTEDDGLAVFDDVCFEAFGS 199

The following BLAST results are available for this feature:
BLAST of Cmc04g0111381 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6580986.12.7e-2655.56hypothetical protein SDJN03_20988, partial [Cucurbita argyrosperma subsp. sorori... [more]
TYG93048.12.2e-1245.79hypothetical protein ES288_A11G079700v1 [Gossypium darwinii][more]
KVH91654.15.6e-0833.93hypothetical protein Ccrd_006329 [Cynara cardunculus var. scolymus][more]
BLAST of Cmc04g0111381 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc04g0111381 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D2EJI71.1e-1245.79Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A11G079700v1 PE=... [more]
A0A103XJ572.7e-0833.93Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_006... [more]
BLAST of Cmc04g0111381 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0111381.1Cmc04g0111381.1mRNA