Cmc04g0111221 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0111221
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ubiquitin receptor RAD23
Location	CMiso1.1chr04: 30423994 .. 30429446 (+)
RNA-Seq Expression	Cmc04g0111221
Synteny	Cmc04g0111221

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACGTGCCTGACCCACGCAGGGCAGTGGGAAGTGTAAAGTCCATTTACCCACTTTCCTTCTTTCTTTCTTCCTCCCAACAAATGAACCTTCTCTGATTCTCTCCATTGCCAATCTAGGGTTTTCTTTTTCTCTTTTTTCCTTTCCCAATTTCTCCTCCTCTTCGCCTTCTTCTTCTTCTACCTTCTGGCCATGAAGCTTACGGTTAAGACCCTCAAAGGAAGTCACTTTCAAATTGAGGTTCAACCTACAGACACCGTCAGTTTTTCTTCTCTTCTCTCCTTTTTTCAATCTTCAATTCATTCCCTTCTTTATGTTTTCTTTTTCATATTACCAAAATTTTACGTTTTTACATAAGGGTATTGAATTTCTGTTGCTCCTTTACTGGATTATGTAAACTAGTCTATGAAATGTTGTTCACCTTGATGTTAGTATCTATATATGGTGATTTCTTTAGGGGTTCATCATTCCATTCCACCAATTATATCAGTGGTATTTCAGATTTTTTTTATTTCGATTAAGTTTATAGGCATTCAATGTTTTCCTTCCAGATTATTATTTTTTTATATGTTTATTTTGTTTGTTTCTTTGTTAATTGGATTACTAGTTATGAATTTTTTTGAATGAGTTGCTCAGAAAACCCGTTTTATATTTCGAAAGACAATTTCTTCTGCGGTTCTGCGGTTCTGCCGACGCATTACAATGTCCATTTGAATTTAAAATTCAGCCTTTTCATGCCATGCACTATTTGGTTTTTTTTGCCCCTGGTACTTGAAGCGACTAAATTTCTTATTATTATCATTATTATTTATTTATTGTAGTCTTCTATTTCTCTTAATTCCAAGTATTCTCTATAGGTTTACGTCGTCATTACTTATTGCTTCCAATTGCCAATATTTAAATGGCACCTTGATAATAAGTTGTATGCCTAAGGTTGCCCTTGTTTAGCCTCAAGGTTTATTCCGTTTTGGTTTTTTTTATTTTTTTTATAGAGGTTTATTCCATTTTGATTGATATTTAGTGAGGCTTTGTCCTTTTATTAGATAACGCCAACGACCTAAAATGGTTTAGGTTTAGGATTTTTATGCTGCAAGCAAGGGCTTTGTTTGGAAGGTGTCTTTTAGTGCGATTTATTCAATTGATAAAATTTACAAGAGGTACTATCTCATGCCCCCTAATCTTCTTGTGGCAGTGTTGGGCTTCTTTTTGTAGGCCTGTTTTGGTATACCCTTGTACATTCTCTTCATTTTTGTCAATAAACTGAAAAACCCCCTACTCTTTTGAAATATCTTCTCCACGTCCATGAAAGGAAAGAGGACATATAACACTTGTTTGGTCACAATTAGCTTGATCAAAGCTCATAGCTAAATTGTAGAACACCGTGCTGGTTTCCTTTTCCTTTAACTTATACTCACTCCTCAAAAGGCTTATTTAGACTCGAGATTATCTTGATCACTTGATGGATGAAGTTTTTGCTGAATTAGCAGAAGTCAGGAGATAGGATTATAAATTTATAATGCATGGCATGAGATTTGGGACTGACTGAACAATCCCCCCCCCCCATTTACATTGTCTTTTGAATAGCTGAGTGTAGTTGGTGATTTGTCAATCGAGCTGGAAATTGTTACTTTTGCTCAAGTTAAAATATTTCTTAATATAGGAAGTAGTTCGTTTTTTATTTGTTTTATTAAATGTTTTACTTTTTGTCCATCTAACTAGGTATTGGGTGTAAAGAAGAACATTGAGAATGTACAAGGAAAAGATAGTTATCCTTGCGGTCAGCAATTGTTAATCCACAACGGGAAGGTTTTAAAAGATGAAACAACGTTGACAGAGAACAAGATTACCGAAGATGGTTTTCTTGTTGTTATGCTTAGTAAGGTATGTCGTGTTGTAGCCAACTTGGATAACCTTTCAGAAAGTATTAAACTTCCTTTCTGACTATTATCTTGCATCATATTTAAATGGCTACGGTGGACTAATGTACTACACGATAATCTTCTTTCTCATTGTGAAAATCGCCGATCCAACTCTTTATTGTATGCCATTAGTAATGTAAATATTTCAAGATAGTGGATTGATGTTTATATTTCATGAGTTAACATGTCTTAATATAAAACCAATGCTTATACAAGAGCTCTTGATCTTGATTCCATTTTTGTTTTATAGTTTCTTCATGTTGCTTAATTCTTTTGATGGGCTTAATCTCTTAAAAATAGTTGTTGCACACAGGCGGGTTGGTTGCGTGTAAACTAGTCCGGACACTCACCGATATAGTTGTTGTGCAGGAACAGTTTTGTGACTAGTTGTCTAGTTGTCAATAGGTCTCTGGAATCTGAAGCCTAGATTTGCTTGTTGGAAATAGTGTAAACTTTTATCATTTTGTTTGATGTTAACTACCTATTTGGTGTTAGATAATATCTTTATTTGTCCTGTAAAAGGAGGAGCAATAGTTCTATCAAACTGAGAGCTCTACATTCTCAGAAGTCAAGCATCTCACTTAGCGGTTTTAATTTTCAACCGTTGTTAAGTGAAATCCCCATTCGAGCTACTAGAAATTTAATGTCACAGGAGATTATTTTGTTATTCTCTCCATTATCCTCCTAAATAGTGGTTGCATGTATCTATAGATCTCTGAAGAGTTTTGATTAAACATCAGGCACACGTTTAATTCACTGCAATCCCCTTTTTATGAGATTTCTTATTTCACATGGTTTTCAACTGTTCCGCTCACTTATATCCTTTATCCAGAGTAAAGCACCTGGTTCAACTGGGTCATCATCTACTCAGGTTAAATATCTTTCTTTGTTCATTTTATTTTCAGGTCATTATGTAATTAATGCACATTTCTCTCTGAACTAATTTTTGTATGTCTACTTGAAGACAACGACTAATGTTCCTACAACTACTCCAACACCAAATTCTACTTCAATCCCTGAAGCTCCTACACAACCAGCGTGAGTCTATTGATGATACCAACTCAACTTAGTGTCTCTTACCCCTTGGCAGCATGTCAGCTTGATAATTCTATATATTTCTCTGTGCTTGCTTTTTCAGAGCCTCCAGGAACGTTGCTATTTCAGATGTGCCAACTGCTAAGTATGAACACGGTTTCTGCTTTTTGTTGTATCATTTTGTATTTATAATTTTCTATTCACAAGTTTTCCTGTTTACTCTTGAAGTTCCTTTATGTGATTAGGACAGATGCTCAAACTTAAATAGGATAGAGTATCTAATAATTTGTCACGCTGCAGTGCTCAAATTGATACATATGGACAAGCTGCGTCAAATTTAGTTTCTGGAAACAATCTTGAGCAGACCATTCAAGAAATAATGGATATGGGTGGTGGCAGCTGGGATAGAGAAACAGTCACTCGTGCACTTCGAGCAGCCTATAATAATCCTGAGCGGGCAGTAGATTATTTGTACTCTGTATGTTTTACCACTTCACTAATAGATAGTCTTTCAGCCGTCTGTCTCCTATTTATTGTTACCGTACTTGGCTTTATATTCAGGGTATTCCAGAAACCGCAGAAGTTGCAGCCCCTGTGGCTCGTCCACCAACTAGCCAGCCTATGGAAGCAGGTGGTGCGACCGCTCCTCCTGTTTCTGGAGGTCCCAACTCGTCCCCCCTCAACATGTTTCCGCAGGTAAAATTTTGTACTTCATTTAAAATTTTATCCATAAAATTTGTCCTTAAATTCTCACTGAGAGCTAGTGGTTTAGGAGTCCCTTGCTGCCGCTGCTGGTGGTGGTGGAGGAAGCCTTGGATCTCTTGAGTTCCTTAGGAACAACCCACAGGTATGCTTTAATTTTTACTGTCTTCCTAGATTTTGTTGGACTATAGTTTGGAAATTCCTACGGGCTTCTGATCAGTGATCACTTTCTCATTGGTCATGATTAAGAATCATTTTGATCATAACATGTCAGTAATCTTTGCTGCCAAGTTATTTAGCCATGATACTTCCTGTGAAGTGTCTTGTTAATTGAAAAGATGCTCAGTCAAACTTGAGAGCATAAACTTCCCAACAATTGAGGGGCCAAGTTTTAATTAATTCTTCCCTCATGTGATCTGTTTAGGCTCCCCCCTTCCCCCGTCCCCTTTTTGTTGTTATTGGAAACAATGCTGACGAATTTGATATGTACTGTTACTGTCCATGTGGATTATAGTTTCAAGCATTGCGGTCTATGGTGCAAGCAAATCCACAAATATTACAGGTCTGTGTTTATCTGATTTCTCTCTCGTCAATTTCAAGTTTACGTATTCTTTTGGCTAGATCTAAAGCTGTGAACTTGGGCTTGGTTTCAGGCTATGCTTCAGGAGCTTGGGAAGCAGAACCCTCAACTCTTGAGATTGATCCAGGACCATCAAGCAGAGTTCCTCCAGTTAATAAATGAGCCTCTTGAGGGCTTTGAAGGGTAAGTTTTCTCGCCATTTGTGGCCAATGATTTTTATTTTCATATTGAAATTTATATGACCTATCCAAATTTTCGTTTTCTTCCAGGGATCTGTTTGACCAGCCTGATCAAGACATGCCTCATGCTATCAATGTCACACCAGCTGAGCAGCAAGCAATCGAACGAGTAAGTTATCTTCATTTATATACTTTGCTCTATCGAGCAACGAAGATTAATCTATTTACCTTCTTCTCGCCCTTGCTGGCATTTGTAGTTGGAAGCAATGGGGTTTGATAGGGATCAAGTCATTGAGGCCTTTTTAGCTTGTGATCGCAATGAGGAATTGGCTGCCAACTATCTTTTGGAACATGGTGGCGAATTTGAGGATTAAATGGTGAACTTCATCACATTCGATGAATAGTTTTCTTTTTTTTTTTTCTTTTTTTTTTCCGTTGGTTAGATGGATCCATGGTATCTGTTAGCATCTAAGGTTCGAAGTTTCTTCTCAGTACTTTCAATAATACTTTTTCTTTAGAACATTTTAAAGTAATTTGGCACATATGAATCATCAAATATAGAACGTTGAGAGAATAGCAATTAGATTAAGGCGTGAATGTAGAATAACTATAAGCTCAAAGCTAGTTTGCTCGTGTCAACGTTTCAGGTAACGTCGAGCGTGGCGTAATTAGACATTGGAAAAGGTGGGTTTTCTTGATATCTATTGATTATTCTTTGAACAGAATTGAAGTCATGTTGTTCACTGAGGAAGAAAAATGAGAAATCCCAACAGAGTCCCTAGACGAAAGAGCACTCCAGTTCTGCTTATTGTGTTTATCTGTTTGGATTTGTTTGATAACTTTGGGTTAAAGTTAGATTTATATTATTATTATTATTATACTTCTTTTTAGGTTAAACATGGTTTATTAGTAGTCTTTGAACAATTTTAAATTATATTTTTAAGTCCGTCTTCAAATTATGTGTAGACTAATAATTTTAAATTACGTCTTCATATAATTTGATAAAAGCTAAATGGAATTTAAGGATGGTTTCGTTTTT

mRNA sequence

TCACGTGCCTGACCCACGCAGGGCAGTGGGAAGTGTAAAGTCCATTTACCCACTTTCCTTCTTTCTTTCTTCCTCCCAACAAATGAACCTTCTCTGATTCTCTCCATTGCCAATCTAGGGTTTTCTTTTTCTCTTTTTTCCTTTCCCAATTTCTCCTCCTCTTCGCCTTCTTCTTCTTCTACCTTCTGGCCATGAAGCTTACGGTTAAGACCCTCAAAGGAAGTCACTTTCAAATTGAGGTTCAACCTACAGACACCGTATTGGGTGTAAAGAAGAACATTGAGAATGTACAAGGAAAAGATAGTTATCCTTGCGGTCAGCAATTGTTAATCCACAACGGGAAGGTTTTAAAAGATGAAACAACGTTGACAGAGAACAAGATTACCGAAGATGGTTTTCTTGTTGTTATGCTTAGTAAGAGTAAAGCACCTGGTTCAACTGGGTCATCATCTACTCAGACAACGACTAATGTTCCTACAACTACTCCAACACCAAATTCTACTTCAATCCCTGAAGCTCCTACACAACCAGCAGCCTCCAGGAACGTTGCTATTTCAGATGTGCCAACTGCTAATGCTCAAATTGATACATATGGACAAGCTGCGTCAAATTTAGTTTCTGGAAACAATCTTGAGCAGACCATTCAAGAAATAATGGATATGGGTGGTGGCAGCTGGGATAGAGAAACAGTCACTCGTGCACTTCGAGCAGCCTATAATAATCCTGAGCGGGCAGTAGATTATTTGTACTCTGGTATTCCAGAAACCGCAGAAGTTGCAGCCCCTGTGGCTCGTCCACCAACTAGCCAGCCTATGGAAGCAGGTGGTGCGACCGCTCCTCCTGTTTCTGGAGGTCCCAACTCGTCCCCCCTCAACATGTTTCCGCAGGAGTCCCTTGCTGCCGCTGCTGGTGGTGGTGGAGGAAGCCTTGGATCTCTTGAGTTCCTTAGGAACAACCCACAGTTTCAAGCATTGCGGTCTATGGTGCAAGCAAATCCACAAATATTACAGGCTATGCTTCAGGAGCTTGGGAAGCAGAACCCTCAACTCTTGAGATTGATCCAGGACCATCAAGCAGAGTTCCTCCAGTTAATAAATGAGCCTCTTGAGGGCTTTGAAGGGGATCTGTTTGACCAGCCTGATCAAGACATGCCTCATGCTATCAATGTCACACCAGCTGAGCAGCAAGCAATCGAACGATTGGAAGCAATGGGGTTTGATAGGGATCAAGTCATTGAGGCCTTTTTAGCTTGTGATCGCAATGAGGAATTGGCTGCCAACTATCTTTTGGAACATGGTGGCGAATTTGAGGATTAAATGGTGAACTTCATCACATTCGATGAATAGTTTTCTTTTTTTTTTTTCTTTTTTTTTTCCGTTGGTTAGATGGATCCATGGTATCTGTTAGCATCTAAGGTTCGAAGTTTCTTCTCAGTACTTTCAATAATACTTTTTCTTTAGAACATTTTAAAGTAATTTGGCACATATGAATCATCAAATATAGAACGTTGAGAGAATAGCAATTAGATTAAGGCGTGAATGTAGAATAACTATAAGCTCAAAGCTAGTTTGCTCGTGTCAACGTTTCAGGTAACGTCGAGCGTGGCGTAATTAGACATTGGAAAAGGTGGGTTTTCTTGATATCTATTGATTATTCTTTGAACAGAATTGAAGTCATGTTGTTCACTGAGGAAGAAAAATGAGAAATCCCAACAGAGTCCCTAGACGAAAGAGCACTCCAGTTCTGCTTATTGTGTTTATCTGTTTGGATTTGTTTGATAACTTTGGGTTAAAGTTAGATTTATATTATTATTATTATTATACTTCTTTTTAGGTTAAACATGGTTTATTAGTAGTCTTTGAACAATTTTAAATTATATTTTTAAGTCCGTCTTCAAATTATGTGTAGACTAATAATTTTAAATTACGTCTTCATATAATTTGATAAAAGCTAAATGGAATTTAAGGATGGTTTCGTTTTT

Coding sequence (CDS)

ATGAAGCTTACGGTTAAGACCCTCAAAGGAAGTCACTTTCAAATTGAGGTTCAACCTACAGACACCGTATTGGGTGTAAAGAAGAACATTGAGAATGTACAAGGAAAAGATAGTTATCCTTGCGGTCAGCAATTGTTAATCCACAACGGGAAGGTTTTAAAAGATGAAACAACGTTGACAGAGAACAAGATTACCGAAGATGGTTTTCTTGTTGTTATGCTTAGTAAGAGTAAAGCACCTGGTTCAACTGGGTCATCATCTACTCAGACAACGACTAATGTTCCTACAACTACTCCAACACCAAATTCTACTTCAATCCCTGAAGCTCCTACACAACCAGCAGCCTCCAGGAACGTTGCTATTTCAGATGTGCCAACTGCTAATGCTCAAATTGATACATATGGACAAGCTGCGTCAAATTTAGTTTCTGGAAACAATCTTGAGCAGACCATTCAAGAAATAATGGATATGGGTGGTGGCAGCTGGGATAGAGAAACAGTCACTCGTGCACTTCGAGCAGCCTATAATAATCCTGAGCGGGCAGTAGATTATTTGTACTCTGGTATTCCAGAAACCGCAGAAGTTGCAGCCCCTGTGGCTCGTCCACCAACTAGCCAGCCTATGGAAGCAGGTGGTGCGACCGCTCCTCCTGTTTCTGGAGGTCCCAACTCGTCCCCCCTCAACATGTTTCCGCAGGAGTCCCTTGCTGCCGCTGCTGGTGGTGGTGGAGGAAGCCTTGGATCTCTTGAGTTCCTTAGGAACAACCCACAGTTTCAAGCATTGCGGTCTATGGTGCAAGCAAATCCACAAATATTACAGGCTATGCTTCAGGAGCTTGGGAAGCAGAACCCTCAACTCTTGAGATTGATCCAGGACCATCAAGCAGAGTTCCTCCAGTTAATAAATGAGCCTCTTGAGGGCTTTGAAGGGGATCTGTTTGACCAGCCTGATCAAGACATGCCTCATGCTATCAATGTCACACCAGCTGAGCAGCAAGCAATCGAACGATTGGAAGCAATGGGGTTTGATAGGGATCAAGTCATTGAGGCCTTTTTAGCTTGTGATCGCAATGAGGAATTGGCTGCCAACTATCTTTTGGAACATGGTGGCGAATTTGAGGATTAA

Protein sequence

MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLTENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVAISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARPPTSQPMEAGGATAPPVSGGPNSSPLNMFPQESLAAAAGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED

Homology

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BLAST of Cmc04g0111221 vs. NCBI nr
Match: XP_008443453.1 (PREDICTED: ubiquitin receptor RAD23b-like [Cucumis melo] >XP_008443454.1 PREDICTED: ubiquitin receptor RAD23b-like [Cucumis melo])

HSP 1 Score: 718.8 bits (1854), Expect = 2.5e-203
Identity = 373/374 (99.73%), Postives = 374/374 (100.00%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120
           ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA
Sbjct: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
           ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER
Sbjct: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTSQPMEAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPETAEVAAPVARPPTSQP+EAGGATAPPVSGGPNSSPLNMFPQESLAAAAG
Sbjct: 181 AVDYLYSGIPETAEVAAPVARPPTSQPIEAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360
           INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 375
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Cmc04g0111221 vs. NCBI nr
Match: XP_004147454.1 (ubiquitin receptor RAD23b [Cucumis sativus] >KGN59613.1 hypothetical protein Csa_002691 [Cucumis sativus])

HSP 1 Score: 708.4 bits (1827), Expect = 3.3e-200
Identity = 368/374 (98.40%), Postives = 370/374 (98.93%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPC QQLLIHNGKVLKDETTLT
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120
           ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTT VPTTTPTPNSTSIPEAP QPAASRNVA
Sbjct: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
           ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER
Sbjct: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTSQPMEAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPETAEVAAPVARPPT QP++AGGATAPPVSGGPNSSPLNMFPQESLAAAAG
Sbjct: 181 AVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360
           INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 375
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Cmc04g0111221 vs. NCBI nr
Match: XP_038905754.1 (ubiquitin receptor RAD23b-like [Benincasa hispida])

HSP 1 Score: 706.1 bits (1821), Expect = 1.7e-199
Identity = 367/374 (98.13%), Postives = 371/374 (99.20%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120
           ENK+TEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPN TSIP+APTQPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNPTSIPQAPTQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
           ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGG+WDRETVTRALRAAYNNPER
Sbjct: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTSQPMEAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPETAEVAAPVARPPTSQP+E GGATA PVSGGPNSSPLNMFPQESLAAAAG
Sbjct: 181 AVDYLYSGIPETAEVAAPVARPPTSQPIETGGATA-PVSGGPNSSPLNMFPQESLAAAAG 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360
           INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 375
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 373

[Close]

BLAST of Cmc04g0111221 vs. NCBI nr
Match: KAG7017735.1 (Ubiquitin receptor RAD23b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 688.3 bits (1775), Expect = 3.6e-194
Identity = 353/374 (94.39%), Postives = 363/374 (97.06%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIE+ QG DSYPCGQQLLIHNGKVLKDETTL+
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120
           ENK+TEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNST IPEAP QPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
            SDVPTAN Q+DTYGQAASNLVSGNNLEQTIQEIMDMGGG+WDRETVTRALRAAYNNPER
Sbjct: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTSQPMEAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPE AE+AAPVARPP+SQP+E GG TAPP SGGPNSSPLNMFPQESLAAAA 
Sbjct: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360
           INEPLEGFEGDLFDQP+QDMPHAINVTPAEQQAIERLEA+GFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 375
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Cmc04g0111221 vs. NCBI nr
Match: XP_023527347.1 (ubiquitin receptor RAD23b-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527348.1 ubiquitin receptor RAD23b-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023527350.1 ubiquitin receptor RAD23b-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 688.3 bits (1775), Expect = 3.6e-194
Identity = 353/374 (94.39%), Postives = 363/374 (97.06%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIE+ QG DSYPCGQQLLIHNGKVLKDETTL+
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120
           ENK+TEDGFLVVMLSKSKAPGSTGSSSTQTTTNVP TTPTPNSTSIPEAP QPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPITTPTPNSTSIPEAPAQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
            SDVPTAN Q+DTYGQAASNLVSGNNLEQTIQEIMDMGGG+WDRETVTRALRAAYNNPER
Sbjct: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTSQPMEAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPE AE+AAPVARPP+SQP+E GG TAPP SGGPNSSPLNMFPQESLAAAA 
Sbjct: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360
           INEPLEGFEGDLFDQP+QDMPHAINVTPAEQQAIERLEA+GFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 375
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Cmc04g0111221 vs. ExPASy Swiss-Prot
Match: Q84L33 (Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3)

HSP 1 Score: 495.7 bits (1275), Expect = 4.5e-139
Identity = 270/379 (71.24%), Postives = 314/379 (82.85%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHF+I V P+DT++ VKKNIE+ QGKD+YPCGQQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120
           ENK+TE+GFLVVMLSKSK+ GS G +S QT++     + T +ST  P AP+   +S  V 
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTK-PAAPSTTQSS-PVP 120

Query: 121 ISDVPTAN---AQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNN 180
            S +P      AQ DTYGQAAS LVSG++LEQ +Q+IM+MGGGSWD+ETVTRALRAAYNN
Sbjct: 121 ASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNN 180

Query: 181 PERAVDYLYSGIPETAEVAAPVARPPTSQPMEAGGATAPPVSGGPNSSPLNMFPQESLAA 240
           PERAVDYLYSGIP+TAEVA PV   P +Q   +G A   P SGGPNSSPL++FPQE++AA
Sbjct: 181 PERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPLDLFPQETVAA 240

Query: 241 AAGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEF 300
           A   G G LG+LEFLRNN QFQ LR+MV +NPQILQ MLQELGKQNPQLLRLIQ++QAEF
Sbjct: 241 A---GSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEF 300

Query: 301 LQLINEPLEGF--EGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACD 360
           LQL+NEP EG   EGD+FDQP+Q+MPHAINVTPAEQ+AI+RLEAMGFDR  VIEAFLACD
Sbjct: 301 LQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACD 360

Query: 361 RNEELAANYLLEHGGEFED 375
           RNEELAANYLLE+ G+FED
Sbjct: 361 RNEELAANYLLENSGDFED 371

[Close]

BLAST of Cmc04g0111221 vs. ExPASy Swiss-Prot
Match: Q84L32 (Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=2 SV=2)

HSP 1 Score: 480.7 bits (1236), Expect = 1.5e-134
Identity = 264/382 (69.11%), Postives = 307/382 (80.37%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHF+I V PTDT++ VKKNIE+ Q KD+YPCGQQLLIHNGKVLKDETTL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPA----AS 120
           ENK+TE+GFLVVMLSKSK   S G SSTQ T+   TTT T +ST++    T  +    AS
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQPTS---TTTSTISSTTLAAPSTTQSIAVPAS 120

Query: 121 RNVAISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYN 180
            +  + + PT  AQ DTYGQAAS LVSG+++EQ +Q+IM+MGGGSWD+ETVTRALRAAYN
Sbjct: 121 NSTPVQEQPT--AQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAYN 180

Query: 181 NPERAVDYLYSGIPETAEVAAPVARPPTSQPMEAGG--ATAPPVSGGPNSSPLNMFPQES 240
           NPERAVDYLYSGIPET  +      P T+      G   TAPP SGGPNSSPL++FPQE+
Sbjct: 181 NPERAVDYLYSGIPETVTI------PATNLSGVGSGRELTAPPPSGGPNSSPLDLFPQEA 240

Query: 241 LAAAAGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQ 300
           ++ AA   GG LG+LEFLR N QFQ LRSMV +NPQILQ MLQELGKQNPQLLRLIQ++Q
Sbjct: 241 VSDAA---GGDLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQ 300

Query: 301 AEFLQLINEPLEGFEG--DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFL 360
           AEFLQL+NEP EG +G  D+FDQPDQ+MPH++NVTP EQ++IERLEAMGFDR  VIEAFL
Sbjct: 301 AEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFL 360

Query: 361 ACDRNEELAANYLLEHGGEFED 375
           +CDRNEELAANYLLEH  +FED
Sbjct: 361 SCDRNEELAANYLLEHSADFED 368

[Close]

BLAST of Cmc04g0111221 vs. ExPASy Swiss-Prot
Match: Q84L30 (Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2)

HSP 1 Score: 390.2 bits (1001), Expect = 2.6e-107
Identity = 220/385 (57.14%), Postives = 279/385 (72.47%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MK+ VKTL GS+F+IEV+P D V  VK  IE V+G + YP  +Q+LIH GKVLKDETTL 
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKITEDGFLVVMLSKSKA--PGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRN 120
           EN + E+ F+V+MLSK+KA   G++ +S+   +   P T  TP  ++   +   P +   
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGASTASAPAPSATQPQTVATPQVSAPTASVPVPTSGTA 120

Query: 121 VAISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNP 180
            A +    A+ Q D YGQAASNLV+G  LE T+Q+I+DMGGGSWDR+TV RALRAA+NNP
Sbjct: 121 TAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQILDMGGGSWDRDTVVRALRAAFNNP 180

Query: 181 ERAVDYLYSGIPETAEVAAPVARPPT---------SQPMEAGGATAPPVSGGPNSSPLNM 240
           ERAV+YLYSGIP  AE+  PVA+ P          +QP +A    A   +GGPN++PLN+
Sbjct: 181 ERAVEYLYSGIPAQAEI-PPVAQAPATGEQAANPLAQPQQAAAPAA--ATGGPNANPLNL 240

Query: 241 FPQESLAAAAGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRL 300
           FPQ   AA AG G    G+L+FLRN+ QFQALR+MVQANPQILQ MLQELGKQNPQL+RL
Sbjct: 241 FPQGMPAADAGAGA---GNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRL 300

Query: 301 IQDHQAEFLQLINEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIE 360
           IQ+HQA+FL+LINEP+EG E ++ +Q +  MP A+ VTP E++AIERLE MGFDR  V+E
Sbjct: 301 IQEHQADFLRLINEPVEG-EENVMEQLEAAMPQAVTVTPEEREAIERLEGMGFDRAMVLE 360

Query: 361 AFLACDRNEELAANYLLEHGGEFED 375
            F AC++NEELAANYLL+H  EFED
Sbjct: 361 VFFACNKNEELAANYLLDHMHEFED 377

[Close]

BLAST of Cmc04g0111221 vs. ExPASy Swiss-Prot
Match: Q84L31 (Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2)

HSP 1 Score: 381.7 bits (979), Expect = 9.4e-105
Identity = 228/423 (53.90%), Postives = 284/423 (67.14%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MK+ VKTLKG+HF+IEV+P D+V+ VKKNIE+VQG D YP  +Q+LIH GKVLKDETT+ 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKITEDGFLVVMLSKSK---APGSTGSSSTQTTTNVPTTT-------PTPNSTSIPEAP 120
           ENK+ E+ F+V+M++KSK   A  S+ S+ T    ++P +T        TP S S P AP
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120

Query: 121 T-------------QPAASRNVAISDVP-----------------TANAQIDTYGQAASN 180
                          P A+     + +P                    +Q D YGQAASN
Sbjct: 121 APTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAASN 180

Query: 181 LVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVA 240
           L +G+NLE TIQ+I+DMGGG+WDRETV  ALRAA+NNPERAV+YLY+GIPE AEV  PVA
Sbjct: 181 LAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEV-PPVA 240

Query: 241 RPPTS--QPMEAGGATAPPV---SGGPNSSPLNMFPQESLAAAAGGGGGSLGSLEFLRNN 300
           RPP S  QP      T  P    + GPN++PL++FPQ        GG    G+L+FLRN+
Sbjct: 241 RPPASAGQPANPPAQTQQPAAAPASGPNANPLDLFPQ---GLPNVGGNPGAGTLDFLRNS 300

Query: 301 PQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLE--GFEGDLF 360
            QFQALR+MVQANPQ+LQ MLQELGKQNP L+RLIQDHQA+FL+LINEP+E  G  G+L 
Sbjct: 301 QQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLL 360

Query: 361 DQPDQDM--PHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHGGE 375
            Q    M  P AI VT  E++AIERLEAMGF+R  V+E F AC++NEELAANYLL+H  E
Sbjct: 361 GQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHE 419

[Close]

BLAST of Cmc04g0111221 vs. ExPASy Swiss-Prot
Match: Q40742 (Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD23 PE=1 SV=2)

HSP 1 Score: 356.3 bits (913), Expect = 4.2e-97
Identity = 206/390 (52.82%), Postives = 264/390 (67.69%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MK++VKTLKGS FQIEV     V  VK+ IE  QG+  YP  QQ+LIH GKVLKD+TTL 
Sbjct: 1   MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120
           ENK+ E+ FLV+ML + K   S+  ++++  +N    T T  +    +AP  PA +  V 
Sbjct: 61  ENKVLENSFLVIMLRQGKGSSSSAPATSKAPSNQAPPTQTVPAAPASQAPVAPATTVPVT 120

Query: 121 IS-DVPTANA----------QIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTR 180
           +S   PTA A          + D YGQA SNLV+G+NLE TIQ I++MGGG WDR+ V  
Sbjct: 121 VSAPTPTATASPAPAVAVSSEADNYGQATSNLVAGSNLEATIQSILEMGGGIWDRDIVLH 180

Query: 181 ALRAAYNNPERAVDYLYSGIPETAEVAAPVARPPTSQPMEAGGATAPP----VSGGPNSS 240
           AL AA+NNPERAV+YLYSG+PE  ++  P      + P +A  AT P     +S GPN+S
Sbjct: 181 ALSAAFNNPERAVEYLYSGVPEQMDIPVPPPSIQPANPTQASQATQPAAPSILSSGPNAS 240

Query: 241 PLNMFPQESLAAAAGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQ 300
           PL++FPQ    A+    G  LG+L+ LRNN QF+ L S+VQANPQILQ +LQELGKQNPQ
Sbjct: 241 PLDLFPQALPNASTDAAG--LGNLDALRNNAQFRTLLSLVQANPQILQPLLQELGKQNPQ 300

Query: 301 LLRLIQDHQAEFLQLINEPLEG-FEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDR 360
           +L+LIQ++QAEFL LINEP EG  E +L DQ  + MP  I VTP E +AI RLEAMGFDR
Sbjct: 301 ILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAMPQTIAVTPEENEAILRLEAMGFDR 360

Query: 361 DQVIEAFLACDRNEELAANYLLEHGGEFED 375
             V++ F AC+++E+LAANYLL+H  EF+D
Sbjct: 361 ALVLDVFFACNKDEQLAANYLLDHMNEFDD 388

[Close]

BLAST of Cmc04g0111221 vs. ExPASy TrEMBL
Match: A0A1S3B8V4 (Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103487042 PE=3 SV=1)

HSP 1 Score: 718.8 bits (1854), Expect = 1.2e-203
Identity = 373/374 (99.73%), Postives = 374/374 (100.00%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120
           ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA
Sbjct: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
           ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER
Sbjct: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTSQPMEAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPETAEVAAPVARPPTSQP+EAGGATAPPVSGGPNSSPLNMFPQESLAAAAG
Sbjct: 181 AVDYLYSGIPETAEVAAPVARPPTSQPIEAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360
           INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 375
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Cmc04g0111221 vs. ExPASy TrEMBL
Match: A0A0A0LCV4 (Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G829030 PE=3 SV=1)

HSP 1 Score: 708.4 bits (1827), Expect = 1.6e-200
Identity = 368/374 (98.40%), Postives = 370/374 (98.93%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPC QQLLIHNGKVLKDETTLT
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120
           ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTT VPTTTPTPNSTSIPEAP QPAASRNVA
Sbjct: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
           ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER
Sbjct: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTSQPMEAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPETAEVAAPVARPPT QP++AGGATAPPVSGGPNSSPLNMFPQESLAAAAG
Sbjct: 181 AVDYLYSGIPETAEVAAPVARPPTGQPIDAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360
           INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 375
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Cmc04g0111221 vs. ExPASy TrEMBL
Match: A0A6J1J0D2 (Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111482316 PE=3 SV=1)

HSP 1 Score: 681.8 bits (1758), Expect = 1.6e-192
Identity = 349/374 (93.32%), Postives = 362/374 (96.79%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIE+ QG DSYPCGQQLLIHNGKVLKD+TTL+
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDDTTLS 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120
           ENK+TEDGFLVVMLSKSKAPGS+GSSSTQTTTNVPTT PTPNST IPEAP QPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSSGSSSTQTTTNVPTTIPTPNSTLIPEAPAQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
            SDVPTAN Q+DTYGQAASNLVSGNNLEQTIQEIMDMGGG+WDRETVTRALRAAYNNPER
Sbjct: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTSQPMEAGGATAPPVSGGPNSSPLNMFPQESLAAAAG 240
           AVDYLYSGIPE AE+AAPVARPP+SQP+E GG TAPP SGGPNSSPLNMFPQESLAAAA 
Sbjct: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPPTSGGPNSSPLNMFPQESLAAAAA 240

Query: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300
           GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL
Sbjct: 241 GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQL 300

Query: 301 INEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEEL 360
           INEPLEGFEGDLFDQP+QDMPHAINVTPAEQQAIERLEA+GFDR+QVIEAFLACDRNEEL
Sbjct: 301 INEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDREQVIEAFLACDRNEEL 360

Query: 361 AANYLLEHGGEFED 375
           AANYLLEHGGEFED
Sbjct: 361 AANYLLEHGGEFED 374

[Close]

BLAST of Cmc04g0111221 vs. ExPASy TrEMBL
Match: A0A6J1F959 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111441956 PE=3 SV=1)

HSP 1 Score: 676.8 bits (1745), Expect = 5.2e-191
Identity = 352/376 (93.62%), Postives = 362/376 (96.28%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIE+ QG DSYPCGQQLLIHNGKVLKDETTL+
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120
           ENK+TEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNST IPEAP QPAASRNVA
Sbjct: 61  ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA 120

Query: 121 ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180
            SDVPTAN Q+DTYGQAASNLVSGNNLEQTIQEIMDMGGG+WDRETVTRALRAAYNNPER
Sbjct: 121 TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 181 AVDYLYSGIPETAEVAAPVARPPTSQPMEAGGATAPPVSGGPNSSPLNMFPQESL--AAA 240
           AVDYLYSGIPE AE+AAPVARPP+SQP+E GG TA P SGGPNSSPLNMFPQESL  AAA
Sbjct: 181 AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTA-PTSGGPNSSPLNMFPQESLAAAAA 240

Query: 241 AGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFL 300
           A GGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFL
Sbjct: 241 AAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFL 300

Query: 301 QLINEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNE 360
           QLINEPLEGFEGDLFDQP+QDMPHAINVTPAEQQAIERLEA+GFDRDQVIEAFLACDRNE
Sbjct: 301 QLINEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNE 360

Query: 361 ELAANYLLEHGGEFED 375
           ELAANYLLEHGGEFED
Sbjct: 361 ELAANYLLEHGGEFED 375

[Close]

BLAST of Cmc04g0111221 vs. ExPASy TrEMBL
Match: A0A5A7UF49 (Ubiquitin receptor RAD23 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1804G00110 PE=3 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 1.2e-190
Identity = 351/352 (99.72%), Postives = 352/352 (100.00%), Query Frame = 0


Query: 23  VLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLTENKITEDGFLVVMLSKSKAPGS 82
           VLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLTENKITEDGFLVVMLSKSKAPGS
Sbjct: 11  VLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLTENKITEDGFLVVMLSKSKAPGS 70

Query: 83  TGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVAISDVPTANAQIDTYGQAASNLV 142
           TGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVAISDVPTANAQIDTYGQAASNLV
Sbjct: 71  TGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVAISDVPTANAQIDTYGQAASNLV 130

Query: 143 SGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARP 202
           SGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARP
Sbjct: 131 SGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARP 190

Query: 203 PTSQPMEAGGATAPPVSGGPNSSPLNMFPQESLAAAAGGGGGSLGSLEFLRNNPQFQALR 262
           PTSQP+EAGGATAPPVSGGPNSSPLNMFPQESLAAAAGGGGGSLGSLEFLRNNPQFQALR
Sbjct: 191 PTSQPIEAGGATAPPVSGGPNSSPLNMFPQESLAAAAGGGGGSLGSLEFLRNNPQFQALR 250

Query: 263 SMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPDQDMPH 322
           SMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPDQDMPH
Sbjct: 251 SMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPDQDMPH 310

Query: 323 AINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED 375
           AINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED
Sbjct: 311 AINVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED 362

[Close]

BLAST of Cmc04g0111221 vs. TAIR 10
Match: AT1G79650.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 495.7 bits (1275), Expect = 3.2e-140
Identity = 270/379 (71.24%), Postives = 314/379 (82.85%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHF+I V P+DT++ VKKNIE+ QGKD+YPCGQQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120
           ENK+TE+GFLVVMLSKSK+ GS G +S QT++     + T +ST  P AP+   +S  V 
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTK-PAAPSTTQSS-PVP 120

Query: 121 ISDVPTAN---AQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNN 180
            S +P      AQ DTYGQAAS LVSG++LEQ +Q+IM+MGGGSWD+ETVTRALRAAYNN
Sbjct: 121 ASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNN 180

Query: 181 PERAVDYLYSGIPETAEVAAPVARPPTSQPMEAGGATAPPVSGGPNSSPLNMFPQESLAA 240
           PERAVDYLYSGIP+TAEVA PV   P +Q   +G A   P SGGPNSSPL++FPQE++AA
Sbjct: 181 PERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPLDLFPQETVAA 240

Query: 241 AAGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEF 300
           A   G G LG+LEFLRNN QFQ LR+MV +NPQILQ MLQELGKQNPQLLRLIQ++QAEF
Sbjct: 241 A---GSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEF 300

Query: 301 LQLINEPLEGF--EGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACD 360
           LQL+NEP EG   EGD+FDQP+Q+MPHAINVTPAEQ+AI+RLEAMGFDR  VIEAFLACD
Sbjct: 301 LQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACD 360

Query: 361 RNEELAANYLLEHGGEFED 375
           RNEELAANYLLE+ G+FED
Sbjct: 361 RNEELAANYLLENSGDFED 371

[Close]

BLAST of Cmc04g0111221 vs. TAIR 10
Match: AT1G79650.2 (Rad23 UV excision repair protein family )

HSP 1 Score: 491.9 bits (1265), Expect = 4.6e-139
Identity = 266/378 (70.37%), Postives = 308/378 (81.48%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHF+I V P+DT++ VKKNIE+ QGKD+YPCGQQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQ--TTTNVPTTTPTPNSTSIPEAPTQPAASRN 120
           ENK+TE+GFLVVMLSKSK+ GS G +S Q  + T   T    P++T     P  P     
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQPVSATTSSTKPAAPSTTQSSPVPASP----- 120

Query: 121 VAISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNP 180
           +   + P   AQ DTYGQAAS LVSG++LEQ +Q+IM+MGGGSWD+ETVTRALRAAYNNP
Sbjct: 121 IPAQEQPA--AQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNP 180

Query: 181 ERAVDYLYSGIPETAEVAAPVARPPTSQPMEAGGATAPPVSGGPNSSPLNMFPQESLAAA 240
           ERAVDYLYSGIP+TAEVA PV   P +Q   +G A   P SGGPNSSPL++FPQE++AAA
Sbjct: 181 ERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPLDLFPQETVAAA 240

Query: 241 AGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFL 300
              G G LG+LEFLRNN QFQ LR+MV +NPQILQ MLQELGKQNPQLLRLIQ++QAEFL
Sbjct: 241 ---GSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFL 300

Query: 301 QLINEPLEGF--EGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDR 360
           QL+NEP EG   EGD+FDQP+Q+MPHAINVTPAEQ+AI+RLEAMGFDR  VIEAFLACDR
Sbjct: 301 QLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDR 360

Query: 361 NEELAANYLLEHGGEFED 375
           NEELAANYLLE+ G+FED
Sbjct: 361 NEELAANYLLENSGDFED 365

[Close]

BLAST of Cmc04g0111221 vs. TAIR 10
Match: AT1G79650.4 (Rad23 UV excision repair protein family )

HSP 1 Score: 486.9 bits (1252), Expect = 1.5e-137
Identity = 270/401 (67.33%), Postives = 315/401 (78.55%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHF+I V P+DT++ VKKNIE+ QGKD+YPCGQQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQ-----------TTTNVPTTTPTPNSTSIPEA 120
           ENK+TE+GFLVVMLSKSK+ GS G +S Q           T++  P    T  S+ +P +
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTKPAAPSTTQSSPVPAS 120

Query: 121 P----TQPAASRNV----AISDVP------TANAQIDTYGQAASNLVSGNNLEQTIQEIM 180
           P     QPA    V     ++  P       + AQ DTYGQAAS LVSG++LEQ +Q+IM
Sbjct: 121 PIPAQEQPAVYAFVFSFAGLAFCPLYGFPKVSMAQTDTYGQAASTLVSGSSLEQMVQQIM 180

Query: 181 DMGGGSWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARPPTSQPMEAGGATA 240
           +MGGGSWD+ETVTRALRAAYNNPERAVDYLYSGIP+TAEVA PV   P +Q   +G A  
Sbjct: 181 EMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPV 240

Query: 241 PPVSGGPNSSPLNMFPQESLAAAAGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAM 300
            P SGGPNSSPL++FPQE++AAA   G G LG+LEFLRNN QFQ LR+MV +NPQILQ M
Sbjct: 241 APASGGPNSSPLDLFPQETVAAA---GSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPM 300

Query: 301 LQELGKQNPQLLRLIQDHQAEFLQLINEPLEGF--EGDLFDQPDQDMPHAINVTPAEQQA 360
           LQELGKQNPQLLRLIQ++QAEFLQL+NEP EG   EGD+FDQP+Q+MPHAINVTPAEQ+A
Sbjct: 301 LQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEA 360

Query: 361 IERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED 375
           I+RLEAMGFDR  VIEAFLACDRNEELAANYLLE+ G+FED
Sbjct: 361 IQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 395

[Close]

BLAST of Cmc04g0111221 vs. TAIR 10
Match: AT1G16190.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 480.7 bits (1236), Expect = 1.1e-135
Identity = 264/382 (69.11%), Postives = 307/382 (80.37%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHF+I V PTDT++ VKKNIE+ Q KD+YPCGQQLLIHNGKVLKDETTL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPA----AS 120
           ENK+TE+GFLVVMLSKSK   S G SSTQ T+   TTT T +ST++    T  +    AS
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQPTS---TTTSTISSTTLAAPSTTQSIAVPAS 120

Query: 121 RNVAISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYN 180
            +  + + PT  AQ DTYGQAAS LVSG+++EQ +Q+IM+MGGGSWD+ETVTRALRAAYN
Sbjct: 121 NSTPVQEQPT--AQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAYN 180

Query: 181 NPERAVDYLYSGIPETAEVAAPVARPPTSQPMEAGG--ATAPPVSGGPNSSPLNMFPQES 240
           NPERAVDYLYSGIPET  +      P T+      G   TAPP SGGPNSSPL++FPQE+
Sbjct: 181 NPERAVDYLYSGIPETVTI------PATNLSGVGSGRELTAPPPSGGPNSSPLDLFPQEA 240

Query: 241 LAAAAGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQ 300
           ++ AA   GG LG+LEFLR N QFQ LRSMV +NPQILQ MLQELGKQNPQLLRLIQ++Q
Sbjct: 241 VSDAA---GGDLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQ 300

Query: 301 AEFLQLINEPLEGFEG--DLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFL 360
           AEFLQL+NEP EG +G  D+FDQPDQ+MPH++NVTP EQ++IERLEAMGFDR  VIEAFL
Sbjct: 301 AEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFL 360

Query: 361 ACDRNEELAANYLLEHGGEFED 375
           +CDRNEELAANYLLEH  +FED
Sbjct: 361 SCDRNEELAANYLLEHSADFED 368

[Close]

BLAST of Cmc04g0111221 vs. TAIR 10
Match: AT1G79650.3 (Rad23 UV excision repair protein family )

HSP 1 Score: 456.4 bits (1173), Expect = 2.1e-128
Identity = 255/379 (67.28%), Postives = 297/379 (78.36%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCGQQLLIHNGKVLKDETTLT 60
           MKLTVKTLKGSHF+I V P+DT++ VKKNIE+ QGKD+YPCGQQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVA 120
           ENK+TE+GFLVVMLSKSK+ GS G +S QT++     + T +ST  P AP+   +S  V 
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTK-PAAPSTTQSS-PVP 120

Query: 121 ISDVPTAN---AQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNN 180
            S +P      AQ DTYGQAAS LVSG++LEQ +Q+IM+MGGGSWD+ETVTRALRAAYNN
Sbjct: 121 ASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNN 180

Query: 181 PERAVDYLYSGIPETAEVAAPVARPPTSQPMEAGGATAPPVSGGPNSSPLNMFPQESLAA 240
           PERAVDYLYSGIP+TAEVA PV   P +Q   +G A   P SGGPNSSPL++FPQE++AA
Sbjct: 181 PERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPLDLFPQETVAA 240

Query: 241 AAGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEF 300
           A   G G LG+LEFLRNN                     QELGKQNPQLLRLIQ++QAEF
Sbjct: 241 A---GSGDLGTLEFLRNND--------------------QELGKQNPQLLRLIQENQAEF 300

Query: 301 LQLINEPLEGF--EGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACD 360
           LQL+NEP EG   EGD+FDQP+Q+MPHAINVTPAEQ+AI+RLEAMGFDR  VIEAFLACD
Sbjct: 301 LQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACD 351

Query: 361 RNEELAANYLLEHGGEFED 375
           RNEELAANYLLE+ G+FED
Sbjct: 361 RNEELAANYLLENSGDFED 351

The following BLAST results are available for this feature:

BLAST of Cmc04g0111221 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443453.1	2.5e-203	99.73	PREDICTED: ubiquitin receptor RAD23b-like [Cucumis melo] >XP_008443454.1 PREDICT...	[more]
XP_004147454.1	3.3e-200	98.40	ubiquitin receptor RAD23b [Cucumis sativus] >KGN59613.1 hypothetical protein Csa...	[more]
XP_038905754.1	1.7e-199	98.13	ubiquitin receptor RAD23b-like [Benincasa hispida]	[more]
KAG7017735.1	3.6e-194	94.39	Ubiquitin receptor RAD23b [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023527347.1	3.6e-194	94.39	ubiquitin receptor RAD23b-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_02352...	[more]

BLAST of Cmc04g0111221 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84L33	4.5e-139	71.24	Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3	[more]
Q84L32	1.5e-134	69.11	Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=...	[more]
Q84L30	2.6e-107	57.14	Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2	[more]
Q84L31	9.4e-105	53.90	Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2	[more]
Q40742	4.2e-97	52.82	Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RA...	[more]

BLAST of Cmc04g0111221 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B8V4	1.2e-203	99.73	Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103487042 PE=3 SV=1	[more]
A0A0A0LCV4	1.6e-200	98.40	Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G829030 PE=3 SV=1	[more]
A0A6J1J0D2	1.6e-192	93.32	Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111482316 PE=3 SV=1	[more]
A0A6J1F959	5.2e-191	93.62	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111441956 PE=3 SV=1	[more]
A0A5A7UF49	1.2e-190	99.72	Ubiquitin receptor RAD23 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Cmc04g0111221 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79650.1	3.2e-140	71.24	Rad23 UV excision repair protein family	[more]
AT1G79650.2	4.6e-139	70.37	Rad23 UV excision repair protein family	[more]
AT1G79650.4	1.5e-137	67.33	Rad23 UV excision repair protein family	[more]
AT1G16190.1	1.1e-135	69.11	Rad23 UV excision repair protein family	[more]
AT1G79650.3	2.1e-128	67.28	Rad23 UV excision repair protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 276..296
None	No IPR available	GENE3D	1.10.8.10		coord: 321..368 e-value: 3.8E-24 score: 86.4
None	No IPR available	GENE3D	1.10.8.10		coord: 140..190 e-value: 5.5E-22 score: 79.4
None	No IPR available	GENE3D	3.10.20.90		coord: 1..80 e-value: 4.1E-26 score: 92.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..117
None	No IPR available	PANTHER	PTHR10621:SF32	UBIQUITIN RECEPTOR RAD23A-RELATED	coord: 1..373
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 1..373
None	No IPR available	CDD	cd14379	UBA1_Rad23_plant	coord: 141..190 e-value: 6.19987E-31 score: 110.009
None	No IPR available	CDD	cd01805	Ubl_Rad23	coord: 1..74 e-value: 2.4876E-31 score: 111.495
IPR004806	UV excision repair protein Rad23	PRINTS	PR01839	RAD23PROTEIN	coord: 341..355 score: 58.18 coord: 275..297 score: 63.04 coord: 324..340 score: 62.03 coord: 356..371 score: 61.93
IPR004806	UV excision repair protein Rad23	TIGRFAM	TIGR00601	TIGR00601	coord: 1..373 e-value: 5.1E-125 score: 415.6
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..75 e-value: 3.8E-22 score: 89.6
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..76 e-value: 6.8E-17 score: 61.0
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..79 score: 19.085346
IPR006636	Heat shock chaperonin-binding	SMART	SM00727	CBM	coord: 247..290 e-value: 1.3E-8 score: 44.6
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 330..367 e-value: 3.7E-9 score: 46.4 coord: 147..187 e-value: 1.6E-5 score: 34.4
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 330..365 e-value: 5.4E-13 score: 48.5 coord: 147..185 e-value: 8.7E-15 score: 54.3
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 145..188 score: 12.787865
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 328..368 score: 16.161459
IPR015360	XPC-binding domain	PFAM	PF09280	XPC-binding	coord: 249..304 e-value: 4.0E-23 score: 80.9
IPR036353	XPC-binding domain superfamily	GENE3D	1.10.10.540		coord: 237..304 e-value: 9.1E-28 score: 97.7
IPR036353	XPC-binding domain superfamily	SUPERFAMILY	101238	XPC-binding domain	coord: 246..311
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..90
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 312..370
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 143..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0111221.1	Cmc04g0111221.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding