Cmc04g0110381 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0110381
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	LOB domain-containing protein
Location	CMiso1.1chr04: 29674592 .. 29677281 (+)
RNA-Seq Expression	Cmc04g0110381
Synteny	Cmc04g0110381

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTAAACATTATTTAGGGATATCCCATAAAATAAAGTTTGTTCCTTTTTCCTCTCTCTCTCTCCCTCTCTCTTTTCCTATGGCTTCAACTTCATTTTGCTTAAGGTTTTCATACAAGAGATGTTGAAACAACAGCTTACAGAAAGGAGAGAAAGGGGGAAAAAATTATTGGTAACAAACCCTTTTTAATTATTTGTTTAATTTTGATCAATCTACTTGTTTTTCTTTTTTTGAAATTAATTCATTTTCTTTCTCACATCATCATCAATATGTCCCTCTCTCTCCTCTAGATCTCCTCAATTCACTAATGGGGTGTTTCTTAATTTGTTCGGGGTGGAAAATTGTCGCTAGGATCAGAACGAAAGACGTCCAACTATATCTCCAACCACGATAGAGGTGAAACCGTTGGTAATATAACATATTCAAGACATTTTTTTTGGAAAAAAGATCAAAATTTTGATTAGACTTTGATCTAAATGAGTGTAAGAGAGAGGGAGTGGGCGTTGGTGGGTATGGAAGAGAGATGATTATAGGGAAGGGGACCTTTTAGATTTTATGAAGAGTAGAGAAAATTGAAGTTTGGTATGGGAGAGAGAAAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGACAAAGAGGTAAGGGGAGGAGAGAGAAATTAGGGGCATTTTAATTAATTGTGATTCACTTAGGGACAAGAAACATGCATTGAGGGCTATGTTGCCCTTTGCCTTTAGGGATGCAATTAGGGGAAGGCCAAGTGACCTTCCACCAAATTTTATACAAAACCCTCAACTTTCAACAGGGAAAACCCTATCTTTTTCTTCTTCTTCTCCCTCTCTCTCTCTCTCTCTTTTCAAACTATCATGTGTTTAATTTAGAGCAATATATATATGATAATTGCAAGTTATAACATTTCTAGTTTTTACCATTTTGATAAAGCTTTGTAAATCAAGAGGATATATATATATCAAACTTATGCATATATACAATTGTTATATGATCAAAATAGAGATATGTGCGTTTAATGTTTGGTTGGTGGAGTTAAATAAAAACTTGTGTAATTAGGTAAACTCGATAAAAGAACCAGACCCTTTTCATATATATACACACATAGAGAGAATTGGACAGTGAGAAGAAAGGTCCAAACTTCTAAAGTACTTCTTGGTCCTCGAGTGTTCATATTCAATACTAGTTGAAGCTATGCCTAAAAAACAAAACTTACATTTAACTGATTATACGTAAATTATTCAAGTTAACATAAGTTTAATTGAGATTCTCTCGAATCCTATTCTCAATCTAGTTGAAATGTTCATATACACAATTATTGAAACGTATGATTCGTCTCCTTCATTAGTTTCTTTAAAAAAAAACGCTCTCCCAAACCCTATTCCCAAATATCCCAAATGAAATTACTAGTCAAATAAACCTAAAAGATTATATATTTATATGTATATCATGTAAGAAAACAATACACATAAAAGAGTGTGCGGTCTAGAAATCACCTCAAGAGATTACCCCATAATAAATGAAAATTTGGTTACAAAAGAAATCTCCAAATGGTAAGAAAGACGGCTCTGACAGACCCAAGAAAAGGTGCAAAAAATTTAGGTTGTCGCATAGCTGTAACATGAAAATTCAGCAGTTGTTGTATTGTATGTTTTTCACAACAAAATTTCATATTTAAAACCATCAATTTCTGGTCTTAAATTAAAAAACTACTCCTTATCTTCTCTCTCTCTCTCTAAACCTATACAAGATCTTCAAAATTCAGCCTAAAATTCATCAAAGGTTCAATTTTTAGACACCCCCATTTCATAAAAATTCAAACTTTTTTCTTCTTATATAACTAATTTTAATTTACTATATAATATGTTACCAAAAAAAAATGTAATTCTGATGTCTATTTGTCTCCTCTTTGTTCTTTGATTTATCTTAATTTCTTGTTTAATCCTTTTCATTTGTAGGACGATGTCTTCTTCCACCTACTCTAATTCTCCCTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGCCTACCGGATTGTGTTTTTGCGCCATATTTTCCACCCGAAGAGCCTCAAAAGTTCGCCAATGTTCACAAGATCTTTGGTGCCAGTAACGTCAGCAAACTGTTGAACGAAGTCCAGCCGCATCAGCGGGAGGATGCCGTGAACTCGCTCGCCTACGAGGCCGAGGCAAGGATGAAAGACCCTGTCTATGGCTGTGTTGGCGCCATCTCTATACTCCAAAGGCAAGTCATCAAACTCCAAAAAGAGCTCGATGCTACTAACGCCGACCTCATTCGCTATGCCTGCAGTGAAATGCCAGCCCCATCTCCGTCTTCTTCGTCACAATATGCTCGAAGGTCGTCGTCAACAAGCCACGAGGGAAGCTCGTCTACCTCTAGCTATGGTCATTACTATACTGGTCTCTACTTTTCTCCATGGAGTAACAACAATAATGGCCCTTGTGGAGATGGCCATGACAAAGGAGAATACAAGTAAATATTTTTCATCAATTGATATCATTATCTTTATAATTTGAATCATCACAAGGGATATAATATCATATGCTGATGTGGGTGTGAAAATTTTATGATATTTTGATCATAAATACAATCGATAATTACAAATCACATCTATTGTATTCTGTCTAGTTTGTAAGCTATATATATCTCTAC

mRNA sequence

TGTAAACATTATTTAGGGATATCCCATAAAATAAAGTTTGTTCCTTTTTCCTCTCTCTCTCTCCCTCTCTCTTTTCCTATGGCTTCAACTTCATTTTGCTTAAGGTTTTCATACAAGAGATGTTGAAACAACAGCTTACAGAAAGGAGAGAAAGGGGGAAAAAATTATTGGACGATGTCTTCTTCCACCTACTCTAATTCTCCCTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGCCTACCGGATTGTGTTTTTGCGCCATATTTTCCACCCGAAGAGCCTCAAAAGTTCGCCAATGTTCACAAGATCTTTGGTGCCAGTAACGTCAGCAAACTGTTGAACGAAGTCCAGCCGCATCAGCGGGAGGATGCCGTGAACTCGCTCGCCTACGAGGCCGAGGCAAGGATGAAAGACCCTGTCTATGGCTGTGTTGGCGCCATCTCTATACTCCAAAGGCAAGTCATCAAACTCCAAAAAGAGCTCGATGCTACTAACGCCGACCTCATTCGCTATGCCTGCAGTGAAATGCCAGCCCCATCTCCGTCTTCTTCGTCACAATATGCTCGAAGGTCGTCGTCAACAAGCCACGAGGGAAGCTCGTCTACCTCTAGCTATGGTCATTACTATACTGGTCTCTACTTTTCTCCATGGAGTAACAACAATAATGGCCCTTGTGGAGATGGCCATGACAAAGGAGAATACAAGTAAATATTTTTCATCAATTGATATCATTATCTTTATAATTTGAATCATCACAAGGGATATAATATCATATGCTGATGTGGGTGTGAAAATTTTATGATATTTTGATCATAAATACAATCGATAATTACAAATCACATCTATTGTATTCTGTCTAGTTTGTAAGCTATATATATCTCTAC

Coding sequence (CDS)

ATGTCTTCTTCCACCTACTCTAATTCTCCCTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGCCTACCGGATTGTGTTTTTGCGCCATATTTTCCACCCGAAGAGCCTCAAAAGTTCGCCAATGTTCACAAGATCTTTGGTGCCAGTAACGTCAGCAAACTGTTGAACGAAGTCCAGCCGCATCAGCGGGAGGATGCCGTGAACTCGCTCGCCTACGAGGCCGAGGCAAGGATGAAAGACCCTGTCTATGGCTGTGTTGGCGCCATCTCTATACTCCAAAGGCAAGTCATCAAACTCCAAAAAGAGCTCGATGCTACTAACGCCGACCTCATTCGCTATGCCTGCAGTGAAATGCCAGCCCCATCTCCGTCTTCTTCGTCACAATATGCTCGAAGGTCGTCGTCAACAAGCCACGAGGGAAGCTCGTCTACCTCTAGCTATGGTCATTACTATACTGGTCTCTACTTTTCTCCATGGAGTAACAACAATAATGGCCCTTGTGGAGATGGCCATGACAAAGGAGAATACAAGTAA

Protein sequence

MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPAPSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK

Homology

[Close]

BLAST of Cmc04g0110381 vs. NCBI nr
Match: XP_008443563.1 (PREDICTED: LOB domain-containing protein 25-like [Cucumis melo] >KAA0053633.1 LOB domain-containing protein 25-like [Cucumis melo var. makuwa] >TYK00802.1 LOB domain-containing protein 25-like [Cucumis melo var. makuwa])

HSP 1 Score: 358.6 bits (919), Expect = 3.1e-95
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 178
           PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 177

[Close]

BLAST of Cmc04g0110381 vs. NCBI nr
Match: XP_011652293.1 (LOB domain-containing protein 25 isoform X2 [Cucumis sativus] >KAE8651263.1 hypothetical protein Csa_001141 [Cucumis sativus])

HSP 1 Score: 357.1 bits (915), Expect = 9.0e-95
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE+PA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 120

Query: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 178
           PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 177

[Close]

BLAST of Cmc04g0110381 vs. NCBI nr
Match: XP_004141196.1 (LOB domain-containing protein 25 isoform X1 [Cucumis sativus])

HSP 1 Score: 357.1 bits (915), Expect = 9.0e-95
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 19  MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 78

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE+PA
Sbjct: 79  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 138

Query: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 178
           PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 139 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 195

[Close]

BLAST of Cmc04g0110381 vs. NCBI nr
Match: XP_038905774.1 (LOB domain-containing protein 25-like [Benincasa hispida])

HSP 1 Score: 352.1 bits (902), Expect = 2.9e-93
Identity = 173/177 (97.74%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 16  MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 75

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE+PA
Sbjct: 76  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 135

Query: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 178
           PSPSSSSQYAR+SSSTSHE SSSTSSYGHYY+GLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 136 PSPSSSSQYARKSSSTSHEASSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDKGEYK 192

[Close]

BLAST of Cmc04g0110381 vs. NCBI nr
Match: XP_022935530.1 (LOB domain-containing protein 25-like [Cucurbita moschata])

HSP 1 Score: 334.3 bits (856), Expect = 6.2e-88
Identity = 164/177 (92.66%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120
           HQR+DAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+E+PA
Sbjct: 61  HQRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA 120

Query: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 178
           PSPSSSSQYARRSSSTSH+GSSSTSSYGHYY+  YFSPWSN++NG CGDGHDK E+K
Sbjct: 121 PSPSSSSQYARRSSSTSHDGSSSTSSYGHYYSNPYFSPWSNSHNGSCGDGHDKAEFK 177

[Close]

BLAST of Cmc04g0110381 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-51
Identity = 94/111 (84.68%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 4   STYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQR 63
           S Y+NSPCAACKFLRRKC  DCVFAPYFPPEEP KFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYA 115
           EDAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV++LQ+EL+ TNADL+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of Cmc04g0110381 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.8e-50
Identity = 97/124 (78.23%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPAP 121
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NADL  Y  S   A 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 SPSS 126
           +P +
Sbjct: 123 APGN 126

[Close]

BLAST of Cmc04g0110381 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.6e-40
Identity = 77/121 (63.64%), Postives = 98/121 (80.99%), Query Frame = 0


Query: 7   SNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDA 66
           + SPCAACKFLRRKC PDCVFAPYFPP+ PQKF +VH++FGASNV+KLLNE+ P+QREDA
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 67  VNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPAPSPSSS 126
           VNSLAYEA+ R++DPVYGCV  ISILQR + +LQ++L     +L +Y  +   A + S+S
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASAS 154

Query: 127 S 128
           +
Sbjct: 155 T 155

[Close]

BLAST of Cmc04g0110381 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.6e-40
Identity = 77/121 (63.64%), Postives = 98/121 (80.99%), Query Frame = 0


Query: 7   SNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDA 66
           + SPCAACKFLRRKC PDCVFAPYFPP+ PQKF +VH++FGASNV+KLLNE+ P+QREDA
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 67  VNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPAPSPSSS 126
           VNSLAYEA+ R++DPVYGCV  ISILQR + +LQ++L     +L +Y  +   A + S+S
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASAS 154

Query: 127 S 128
           +
Sbjct: 155 T 155

[Close]

BLAST of Cmc04g0110381 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.5e-39
Identity = 90/175 (51.43%), Postives = 120/175 (68.57%), Query Frame = 0


Query: 3   SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQ 62
           +S+ +NSPCAACKFLRRKC P+CVFAPYFPP++PQKFANVHK+FGASNV+KLLNE+ P Q
Sbjct: 2   ASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQ 61

Query: 63  REDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPAPS 122
           REDAVNSLAYEA+ R++DPVYGCVG IS+LQ Q+ +LQ +L    ++L +Y    + A +
Sbjct: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAAT 121

Query: 123 PSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNG---PCGDGHDKG 175
             S        ++      ++T+   HY+   +F P      G   P G+ +D G
Sbjct: 122 HQSLGINLLAGAA----DGTATAVRDHYHHHQFF-PREQMFGGLDVPAGNNYDGG 171

[Close]

BLAST of Cmc04g0110381 vs. ExPASy TrEMBL
Match: A0A5D3BPW0 (LOB domain-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00030 PE=3 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.5e-95
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 178
           PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 177

[Close]

BLAST of Cmc04g0110381 vs. ExPASy TrEMBL
Match: A0A1S3B938 (LOB domain-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103487119 PE=3 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.5e-95
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 178
           PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 177

[Close]

BLAST of Cmc04g0110381 vs. ExPASy TrEMBL
Match: A0A0A0LI15 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G839790 PE=3 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.3e-95
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 30  MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 89

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE+PA
Sbjct: 90  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 149

Query: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 178
           PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 150 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 206

[Close]

BLAST of Cmc04g0110381 vs. ExPASy TrEMBL
Match: A0A6J1FAW3 (LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111442374 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.0e-88
Identity = 164/177 (92.66%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120
           HQR+DAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+E+PA
Sbjct: 61  HQRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA 120

Query: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 178
           PSPSSSSQYARRSSSTSH+GSSSTSSYGHYY+  YFSPWSN++NG CGDGHDK E+K
Sbjct: 121 PSPSSSSQYARRSSSTSHDGSSSTSSYGHYYSNPYFSPWSNSHNGSCGDGHDKAEFK 177

[Close]

BLAST of Cmc04g0110381 vs. ExPASy TrEMBL
Match: A0A6J1DD95 (LOB domain-containing protein 25-like OS=Momordica charantia OX=3673 GN=LOC111019975 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.9e-88
Identity = 170/180 (94.44%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           M+SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 15  MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 74

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+E+PA
Sbjct: 75  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA 134

Query: 121 --PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDK-GEYK 178
             PSPSSSSQYARRSSST+HEGSSSTSSYGHYY+GLYFSPWS NNNGPCGDGHDK GEYK
Sbjct: 135 PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWS-NNNGPCGDGHDKGGEYK 193

[Close]

BLAST of Cmc04g0110381 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 203.8 bits (517), Expect = 1.2e-52
Identity = 94/111 (84.68%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 4   STYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQR 63
           S Y+NSPCAACKFLRRKC  DCVFAPYFPPEEP KFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYA 115
           EDAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV++LQ+EL+ TNADL+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of Cmc04g0110381 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 200.3 bits (508), Expect = 1.3e-51
Identity = 97/124 (78.23%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPAP 121
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NADL  Y  S   A 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 SPSS 126
           +P +
Sbjct: 123 APGN 126

[Close]

BLAST of Cmc04g0110381 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 200.3 bits (508), Expect = 1.3e-51
Identity = 97/124 (78.23%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPAP 121
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NADL  Y  S   A 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 SPSS 126
           +P +
Sbjct: 123 APGN 126

[Close]

BLAST of Cmc04g0110381 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 200.3 bits (508), Expect = 1.3e-51
Identity = 97/124 (78.23%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPAP 121
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NADL  Y  S   A 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 SPSS 126
           +P +
Sbjct: 123 APGN 126

[Close]

BLAST of Cmc04g0110381 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 200.3 bits (508), Expect = 1.3e-51
Identity = 97/124 (78.23%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPAP 121
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NADL  Y  S   A 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 SPSS 126
           +P +
Sbjct: 123 APGN 126

The following BLAST results are available for this feature:

BLAST of Cmc04g0110381 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443563.1	3.1e-95	100.00	PREDICTED: LOB domain-containing protein 25-like [Cucumis melo] >KAA0053633.1 LO...	[more]
XP_011652293.1	9.0e-95	99.44	LOB domain-containing protein 25 isoform X2 [Cucumis sativus] >KAE8651263.1 hypo...	[more]
XP_004141196.1	9.0e-95	99.44	LOB domain-containing protein 25 isoform X1 [Cucumis sativus]	[more]
XP_038905774.1	2.9e-93	97.74	LOB domain-containing protein 25-like [Benincasa hispida]	[more]
XP_022935530.1	6.2e-88	92.66	LOB domain-containing protein 25-like [Cucurbita moschata]	[more]

BLAST of Cmc04g0110381 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8Q3	1.7e-51	84.68	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
Q9FML4	1.8e-50	78.23	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
A2WXT0	8.6e-40	63.64	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]
Q8LQH4	8.6e-40	63.64	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6...	[more]
O04479	2.5e-39	51.43	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]

BLAST of Cmc04g0110381 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPW0	1.5e-95	100.00	LOB domain-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B938	1.5e-95	100.00	LOB domain-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103487119 PE...	[more]
A0A0A0LI15	4.3e-95	99.44	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G839790 PE=3 SV...	[more]
A0A6J1FAW3	3.0e-88	92.66	LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111442...	[more]
A0A6J1DD95	3.9e-88	94.44	LOB domain-containing protein 25-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]

BLAST of Cmc04g0110381 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27650.1	1.2e-52	84.68	LOB domain-containing protein 25	[more]
AT5G63090.2	1.3e-51	78.23	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.3	1.3e-51	78.23	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.1	1.3e-51	78.23	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.4	1.3e-51	78.23	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..167
None	No IPR available	PANTHER	PTHR31301:SF12	LOB DOMAIN-CONTAINING PROTEIN 25	coord: 1..164
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 1..164
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 10..106 e-value: 2.4E-42 score: 143.5
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 9..110 score: 27.625731

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0110381.1	Cmc04g0110381.1	mRNA