Homology
BLAST of Cmc04g0110231 vs. NCBI nr
Match:
XP_008464928.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At3g01580 [Cucumis melo] >KAA0057245.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18716.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1416.0 bits (3664), Expect = 0.0e+00
Identity = 709/709 (100.00%), Postives = 709/709 (100.00%), Query Frame = 0
Query: 1 MKSSSRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKV 60
MKSSSRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKV
Sbjct: 1 MKSSSRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKV 60
Query: 61 FDETPTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGL 120
FDETPTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGL
Sbjct: 61 FDETPTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGL 120
Query: 121 QALEFGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSM 180
QALEFGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSM
Sbjct: 121 QALEFGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSM 180
Query: 181 ITGYEQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRN 240
ITGYEQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRN
Sbjct: 181 ITGYEQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRN 240
Query: 241 LDYDLSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFN 300
LDYDLSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFN
Sbjct: 241 LDYDLSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFN 300
Query: 301 EMIDRKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCF 360
EMIDRKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCF
Sbjct: 301 EMIDRKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCF 360
Query: 361 SPEEALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILV 420
SPEEALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILV
Sbjct: 361 SPEEALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILV 420
Query: 421 SCSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVT 480
SCSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVT
Sbjct: 421 SCSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVT 480
Query: 481 WSAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMM 540
WSAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMM
Sbjct: 481 WSAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMM 540
Query: 541 LHKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSEL 600
LHKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSEL
Sbjct: 541 LHKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSEL 600
Query: 601 GEIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGN 660
GEIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGN
Sbjct: 601 GEIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGN 660
Query: 661 EVHSFVANDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGTVEIV 710
EVHSFVANDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGTVEIV
Sbjct: 661 EVHSFVANDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGTVEIV 709
BLAST of Cmc04g0110231 vs. NCBI nr
Match:
XP_011652303.1 (putative pentatricopeptide repeat-containing protein At3g01580 [Cucumis sativus])
HSP 1 Score: 1360.1 bits (3519), Expect = 0.0e+00
Identity = 682/709 (96.19%), Postives = 693/709 (97.74%), Query Frame = 0
Query: 1 MKSSSRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKV 60
MKSSSRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSL QAHKV
Sbjct: 1 MKSSSRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLEQAHKV 60
Query: 61 FDETPTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGL 120
FDETPTKTVHLWNALLRSYCKENQWKQTL+LFHDMVSYGITKGKPDNYTIPIVLKACAGL
Sbjct: 61 FDETPTKTVHLWNALLRSYCKENQWKQTLHLFHDMVSYGITKGKPDNYTIPIVLKACAGL 120
Query: 121 QALEFGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSM 180
QALEFGKMVHGFVEK+EKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSM
Sbjct: 121 QALEFGKMVHGFVEKIEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSM 180
Query: 181 ITGYEQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRN 240
ITGYEQNGN EKAVDFFSQMV+IEHLNPDP+TLVSLASACTQLSDSKLGSSIHGFMIRRN
Sbjct: 181 ITGYEQNGNAEKAVDFFSQMVIIEHLNPDPITLVSLASACTQLSDSKLGSSIHGFMIRRN 240
Query: 241 LDYDLSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFN 300
LDYDLSLANSLLNLY KTGSVNAAAKLFE+MPTKDVISWSSLIACYS NGL AEALNLFN
Sbjct: 241 LDYDLSLANSLLNLYAKTGSVNAAAKLFEKMPTKDVISWSSLIACYSHNGLAAEALNLFN 300
Query: 301 EMIDRKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCF 360
EMIDRKIKFNSVT V LQACAVACNLEEGKRIHELV RKGLELDISVSTALIDMYMKCF
Sbjct: 301 EMIDRKIKFNSVTVVAALQACAVACNLEEGKRIHELVARKGLELDISVSTALIDMYMKCF 360
Query: 361 SPEEALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILV 420
SPEEAL VFEKMPKKDVVS AALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILV
Sbjct: 361 SPEEALDVFEKMPKKDVVSWAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILV 420
Query: 421 SCSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVT 480
SCSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFE LKVKDIVT
Sbjct: 421 SCSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEGLKVKDIVT 480
Query: 481 WSAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMM 540
WSAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGI IFNMM
Sbjct: 481 WSAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGIKIFNMM 540
Query: 541 LHKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSEL 600
LHKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAAC+HHKSEL
Sbjct: 541 LHKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACVHHKSEL 600
Query: 601 GEIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGN 660
GEIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKM GESVIEAGN
Sbjct: 601 GEIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMLGESVIEAGN 660
Query: 661 EVHSFVANDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGTVEIV 710
EVHSFVANDRLHSE DQIYRLLRNLNVNM+DES+SSNS+S LQG+VE+V
Sbjct: 661 EVHSFVANDRLHSESDQIYRLLRNLNVNMKDESHSSNSRSYLQGSVEVV 709
BLAST of Cmc04g0110231 vs. NCBI nr
Match:
XP_038905362.1 (putative pentatricopeptide repeat-containing protein At3g01580 [Benincasa hispida])
HSP 1 Score: 1229.9 bits (3181), Expect = 0.0e+00
Identity = 607/702 (86.47%), Postives = 661/702 (94.16%), Query Frame = 0
Query: 8 QLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKVFDETPTK 67
QLVRLFEKCN SKILAQLQCLT+K+GL HDSFFATKLSALHSKYTSLVQAHKVF+ETP+K
Sbjct: 6 QLVRLFEKCNCSKILAQLQCLTVKVGLAHDSFFATKLSALHSKYTSLVQAHKVFEETPSK 65
Query: 68 TVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGLQALEFGK 127
TVHLWNALLRSYCKENQW+QTL+LFHDMVS+GI KGKPDN+TIPIVLKACAGLQAL+FG+
Sbjct: 66 TVHLWNALLRSYCKENQWEQTLHLFHDMVSHGIKKGKPDNFTIPIVLKACAGLQALKFGE 125
Query: 128 MVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSMITGYEQN 187
MVHGF++K EKTD+DMFVGA+LIELYSKCGKM +A +VF+ FSQPDVVMWTSMITGYEQ+
Sbjct: 126 MVHGFIKKNEKTDIDMFVGAALIELYSKCGKMHKALRVFIEFSQPDVVMWTSMITGYEQD 185
Query: 188 GNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRNLDYDLSL 247
GNPEKAVDFFS+MVMI+HLNPDP+TLVSLASACTQLS+SKLGSSIHGF+ RRNLDYDL L
Sbjct: 186 GNPEKAVDFFSEMVMIKHLNPDPITLVSLASACTQLSNSKLGSSIHGFITRRNLDYDLPL 245
Query: 248 ANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFNEMIDRKI 307
ANSLLNLY KTGSVNAAA LFE+MPTKDVI+WSSLIACYS NG AEALNLFNEMIDRKI
Sbjct: 246 ANSLLNLYAKTGSVNAAANLFEKMPTKDVITWSSLIACYSHNGAAAEALNLFNEMIDRKI 305
Query: 308 KFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCFSPEEALY 367
KFNSVT VG LQACAVACNLEEGKRIHELVTR GLELDISVSTALIDMYMKC SPEEA+
Sbjct: 306 KFNSVTVVGALQACAVACNLEEGKRIHELVTRTGLELDISVSTALIDMYMKCCSPEEAID 365
Query: 368 VFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILVSCSDLGI 427
VFEKMPKKDVVS AALLSGYS NGMS KSM TFNTM LNNIKPDAVA+VKILVSCSDLGI
Sbjct: 366 VFEKMPKKDVVSWAALLSGYSLNGMSSKSMATFNTMLLNNIKPDAVAIVKILVSCSDLGI 425
Query: 428 LQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVTWSAIIAG 487
LQQALCLHDY++K+G+T N+FVGASLIELYSKCG+IVNA+KVFEELKVKDIVTWSAIIAG
Sbjct: 426 LQQALCLHDYIVKSGYTFNVFVGASLIELYSKCGSIVNALKVFEELKVKDIVTWSAIIAG 485
Query: 488 YGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMMLHKYRIK 547
YGIQGQGREALKLFNKMIETS+VMPNEVTFLSLLSACSHAGLIEEGI IFNMML++YRIK
Sbjct: 486 YGIQGQGREALKLFNKMIETSKVMPNEVTFLSLLSACSHAGLIEEGIKIFNMMLYEYRIK 545
Query: 548 PMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSELGEIAAKN 607
P MEHYSIIVDLLGRTGELDRAL+FV+KMPIPAGPHVWGALLGAACIHHKSELGEIAAK
Sbjct: 546 PNMEHYSIIVDLLGRTGELDRALDFVQKMPIPAGPHVWGALLGAACIHHKSELGEIAAKY 605
Query: 608 LFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGNEVHSFVA 667
LFKLDPN+ GY+ LLS +YAVEKNWD+VGKLR+M+KEK LKKM G+SVIEAG+EVHSFVA
Sbjct: 606 LFKLDPNHVGYYTLLSNVYAVEKNWDSVGKLRNMIKEKGLKKMLGQSVIEAGSEVHSFVA 665
Query: 668 NDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGTVEIV 710
+DRLH E D IYRLLRNLN+NM++ESY SNS S +GT +I+
Sbjct: 666 DDRLHPESDHIYRLLRNLNINMKNESYGSNSISYSKGTEDIL 707
BLAST of Cmc04g0110231 vs. NCBI nr
Match:
XP_022982551.1 (putative pentatricopeptide repeat-containing protein At3g01580 isoform X1 [Cucurbita maxima])
HSP 1 Score: 1224.2 bits (3166), Expect = 0.0e+00
Identity = 605/705 (85.82%), Postives = 657/705 (93.19%), Query Frame = 0
Query: 5 SRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKVFDET 64
SRDQLV+LFEKC SKILA+LQC TLK+GL HD+FFATKLSALH KYTSLVQAHKVF+ET
Sbjct: 3 SRDQLVKLFEKCKCSKILAELQCYTLKIGLAHDTFFATKLSALHGKYTSLVQAHKVFEET 62
Query: 65 PTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGLQALE 124
P+KTVHLWNALLRSYCKE QW QTLYLF+DMVS+GI+ GKPDN+TIPIVLKACAGLQAL+
Sbjct: 63 PSKTVHLWNALLRSYCKEKQWGQTLYLFNDMVSHGISNGKPDNFTIPIVLKACAGLQALK 122
Query: 125 FGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSMITGY 184
FGK VHGF++K EKTD+DMFVGA+LIELYSKCGKM EA QVFL F QPDVV+WTSMITGY
Sbjct: 123 FGKTVHGFIKKNEKTDLDMFVGAALIELYSKCGKMHEALQVFLEFPQPDVVLWTSMITGY 182
Query: 185 EQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRNLDYD 244
EQNGNP+K+VDFFSQMVMIEH+NPDPVTLVSLASACTQLS+SKLGSSIHGF+ RRNLDYD
Sbjct: 183 EQNGNPKKSVDFFSQMVMIEHVNPDPVTLVSLASACTQLSNSKLGSSIHGFITRRNLDYD 242
Query: 245 LSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFNEMID 304
LSLANSLLNLY KTGSV AAA LFE+MP KDVISWSSLIACY+ NG AEALNLFN+MID
Sbjct: 243 LSLANSLLNLYTKTGSVKAAANLFEKMPIKDVISWSSLIACYAHNGAAAEALNLFNKMID 302
Query: 305 RKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCFSPEE 364
+KIKFNSVT +G LQACAVACNLEEGK+IHELVTRKGLELDISVSTALIDMYMKCFSPEE
Sbjct: 303 QKIKFNSVTVIGALQACAVACNLEEGKKIHELVTRKGLELDISVSTALIDMYMKCFSPEE 362
Query: 365 ALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILVSCSD 424
AL VFEKMPKKDVVS AALLSGYS NGMS KSMGTFNTM LNNIKPDAVA+VKIL SCSD
Sbjct: 363 ALVVFEKMPKKDVVSWAALLSGYSLNGMSSKSMGTFNTMLLNNIKPDAVAIVKILASCSD 422
Query: 425 LGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVTWSAI 484
LGILQQALCLHDYV+K+GFTNNIFVGASLIELYSKCG+ VNAMKVFEE+KVKDIVTWSAI
Sbjct: 423 LGILQQALCLHDYVVKSGFTNNIFVGASLIELYSKCGSTVNAMKVFEEMKVKDIVTWSAI 482
Query: 485 IAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMMLHKY 544
IAGYGIQGQGREALKLF+KM ETSEVM NEVTFLSLLSACSHAGLIEEGI IFNMML++Y
Sbjct: 483 IAGYGIQGQGREALKLFHKMRETSEVMANEVTFLSLLSACSHAGLIEEGIKIFNMMLNEY 542
Query: 545 RIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSELGEIA 604
RI+P MEHY I+VDLLGRTGELD+ALNFV+KMPIPAGPHVWGALLG+ACIHHKS+LGEIA
Sbjct: 543 RIEPNMEHYGIVVDLLGRTGELDKALNFVQKMPIPAGPHVWGALLGSACIHHKSDLGEIA 602
Query: 605 AKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGNEVHS 664
A NLFKLDPN+AGY+ILLS IYAVE NW+NVGKLR+M+KEK LKK+ G+SVIEAG+EVHS
Sbjct: 603 ANNLFKLDPNHAGYYILLSNIYAVENNWENVGKLRNMIKEKGLKKILGQSVIEAGSEVHS 662
Query: 665 FVANDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGTVEIV 710
FVA+DRLH + DQIYRLLRNLNVNMRDE YSSNSK+ LQ EIV
Sbjct: 663 FVADDRLHPDSDQIYRLLRNLNVNMRDEGYSSNSKTYLQDIEEIV 707
BLAST of Cmc04g0110231 vs. NCBI nr
Match:
KAG7017786.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1219.1 bits (3153), Expect = 0.0e+00
Identity = 602/705 (85.39%), Postives = 655/705 (92.91%), Query Frame = 0
Query: 5 SRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKVFDET 64
SRDQLV+LFEKC SK LA+LQC TLK+GL HD+FFATKLSALH KYTSLVQAHKVF+ET
Sbjct: 3 SRDQLVKLFEKCKCSKNLAELQCYTLKIGLAHDTFFATKLSALHGKYTSLVQAHKVFEET 62
Query: 65 PTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGLQALE 124
P+KTVHLWNA+LRSYCKE QW QTLYLF+DMVS+GI+ GKPDN+TIPIVLKACAGLQAL+
Sbjct: 63 PSKTVHLWNAILRSYCKEKQWGQTLYLFNDMVSHGISNGKPDNFTIPIVLKACAGLQALK 122
Query: 125 FGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSMITGY 184
FGK VHGF++K EKTD+DMFVGA+LIELYSKCGKM EA QVFL F QPDVV+WTSMITGY
Sbjct: 123 FGKTVHGFIKKNEKTDLDMFVGAALIELYSKCGKMHEALQVFLEFPQPDVVLWTSMITGY 182
Query: 185 EQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRNLDYD 244
EQNGNP+K+VDFFSQMVMIEH+NPDPVTLVSLASACTQLS+SKLGSSIHGF+ RRNLDYD
Sbjct: 183 EQNGNPKKSVDFFSQMVMIEHVNPDPVTLVSLASACTQLSNSKLGSSIHGFITRRNLDYD 242
Query: 245 LSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFNEMID 304
LSLANSLLNLY KTGSV AAA LFE+MP KDVISWSSLIACY+ NG AEALNLFN+MID
Sbjct: 243 LSLANSLLNLYAKTGSVKAAANLFEKMPIKDVISWSSLIACYAHNGAAAEALNLFNKMID 302
Query: 305 RKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCFSPEE 364
+KIKFNSVT +G LQACAV CNLEEGK+IHELVTRKGLELDISVSTALIDMYMKCFSPEE
Sbjct: 303 QKIKFNSVTVIGALQACAVECNLEEGKKIHELVTRKGLELDISVSTALIDMYMKCFSPEE 362
Query: 365 ALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILVSCSD 424
AL VFEKMPKKDVVS A LLSGYS NGMS KSMGTFNTM LNNIKPDAVA+VKIL SCSD
Sbjct: 363 ALVVFEKMPKKDVVSWATLLSGYSVNGMSSKSMGTFNTMLLNNIKPDAVAIVKILASCSD 422
Query: 425 LGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVTWSAI 484
LGILQQALCLHDYV+K+GFT+N+FVGASLIELYSKCG+ VNAMKVFEE+KVKDIVTWSAI
Sbjct: 423 LGILQQALCLHDYVVKSGFTDNVFVGASLIELYSKCGSTVNAMKVFEEMKVKDIVTWSAI 482
Query: 485 IAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMMLHKY 544
IAGYGIQGQGREALKLF+KM ETSEVM NEVTFLSLLSACSHAGLIEEGI IFNMML++Y
Sbjct: 483 IAGYGIQGQGREALKLFDKMRETSEVMANEVTFLSLLSACSHAGLIEEGIKIFNMMLNEY 542
Query: 545 RIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSELGEIA 604
RI+P MEHY IIVDLLGRTGEL+RALNFV+KMPIPAGPHVWGALLGAACIHHKS+LGEIA
Sbjct: 543 RIEPNMEHYGIIVDLLGRTGELNRALNFVQKMPIPAGPHVWGALLGAACIHHKSDLGEIA 602
Query: 605 AKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGNEVHS 664
A NLFKLDPN+AGY+ILLS IYAVE NW+NVGKLR+M+KEK LKK+ G+SVIEAG+EVHS
Sbjct: 603 ANNLFKLDPNHAGYYILLSNIYAVENNWENVGKLRNMIKEKGLKKILGQSVIEAGSEVHS 662
Query: 665 FVANDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGTVEIV 710
FVA+DRLH + DQIYRLLRNLNVNMRDE YSSNSK+ LQG EIV
Sbjct: 663 FVADDRLHPKSDQIYRLLRNLNVNMRDEGYSSNSKTYLQGIEEIV 707
BLAST of Cmc04g0110231 vs. ExPASy Swiss-Prot
Match:
Q9SS97 (Putative pentatricopeptide repeat-containing protein At3g01580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E87 PE=3 SV=2)
HSP 1 Score: 705.7 bits (1820), Expect = 5.4e-202
Identity = 334/644 (51.86%), Postives = 473/644 (73.45%), Query Frame = 0
Query: 50 KYTSLVQAHKVFDETPTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYT 109
K++S V A ++F E ++++ WN LL+S +E QW++ LY F M + KPDN+T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFR---DEEKPDNFT 65
Query: 110 IPIVLKACAGLQALEFGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGF 169
+P+ LKAC L+ + +G+M+HGFV+K D++VG+SLI +Y KCG+M EA ++F
Sbjct: 66 LPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL 125
Query: 170 SQPDVVMWTSMITGYEQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLG 229
+PD+V W+SM++G+E+NG+P +AV+FF +MVM + PD VTL++L SACT+LS+S+LG
Sbjct: 126 EKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLG 185
Query: 230 SSIHGFMIRRNLDYDLSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQN 289
+HGF+IRR DLSL NSLLN Y K+ + A LF+ + KDVISWS++IACY QN
Sbjct: 186 RCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQN 245
Query: 290 GLTAEALNLFNEMIDRKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVS 349
G AEAL +FN+M+D + N T + VLQACA A +LE+G++ HEL RKGLE ++ VS
Sbjct: 246 GAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVS 305
Query: 350 TALIDMYMKCFSPEEALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRL-NNI 409
TAL+DMYMKCFSPEEA VF ++P+KDVVS AL+SG++ NGM+ +S+ F+ M L NN
Sbjct: 306 TALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT 365
Query: 410 KPDAVAMVKILVSCSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMK 469
+PDA+ MVK+L SCS+LG L+QA C H YVIK GF +N F+GASL+ELYS+CG++ NA K
Sbjct: 366 RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASK 425
Query: 470 VFEELKVKDIVTWSAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAG 529
VF + +KD V W+++I GYGI G+G +AL+ FN M+++SEV PNEVTFLS+LSACSHAG
Sbjct: 426 VFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAG 485
Query: 530 LIEEGINIFNMMLHKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGAL 589
LI EG+ IF +M++ YR+ P +EHY+++VDLLGR G+LD A+ ++MP P + G L
Sbjct: 486 LIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTL 545
Query: 590 LGAACIHHKSELGEIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLK 649
LGA IH E+ E AK LF+L+ N+AGY++L+S +Y V+ W+NV KLR+ VK++ +K
Sbjct: 546 LGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIK 605
Query: 650 KMFGESVIEAGNEVHSFVANDRLHSECDQIYRLLRNLNVNMRDE 693
K ES+IE +VH FVA+D LH E + +Y LL+ L+++M+++
Sbjct: 606 KGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKED 646
BLAST of Cmc04g0110231 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 465.7 bits (1197), Expect = 9.4e-130
Identity = 244/683 (35.72%), Postives = 398/683 (58.27%), Query Frame = 0
Query: 12 LFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKVFDETPTKTVHL 71
L E+C+S K L Q+ L K GL + FF TKL +L +Y S+ +A +VF+ +K L
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 72 WNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGLQALEFGKMVHG 131
++ +L+ + K + + L F V +P Y +LK C L GK +HG
Sbjct: 103 YHTMLKGFAKVSDLDKALQFF---VRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 162
Query: 132 FVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSMITGYEQNGNPE 191
+ K +D+F L +Y+KC +++EA +VF + D+V W +++ GY QNG
Sbjct: 163 LLVK-SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 222
Query: 192 KAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRNLDYDLSLANSL 251
A++ M E+L P +T+VS+ A + L +G IHG+ +R D ++++ +L
Sbjct: 223 MALEMVKSMCE-ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 282
Query: 252 LNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFNEMIDRKIKFNS 311
+++Y K GS+ A +LF+ M ++V+SW+S+I Y QN EA+ +F +M+D +K
Sbjct: 283 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 342
Query: 312 VTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCFSPEEALYVFEK 371
V+ +G L ACA +LE G+ IH+L GL+ ++SV +LI MY KC + A +F K
Sbjct: 343 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 402
Query: 372 MPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILVSCSDLGILQQA 431
+ + +VS A++ G++ NG ++ F+ MR +KPD V ++ + ++L I A
Sbjct: 403 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 462
Query: 432 LCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVTWSAIIAGYGIQ 491
+H V+++ N+FV +L+++Y+KCG I+ A +F+ + + + TW+A+I GYG
Sbjct: 463 KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTH 522
Query: 492 GQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMMLHKYRIKPMME 551
G G+ AL+LF +M + + PN VTFLS++SACSH+GL+E G+ F MM Y I+ M+
Sbjct: 523 GFGKAALELFEEM-QKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 582
Query: 552 HYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSELGEIAAKNLFKL 611
HY +VDLLGR G L+ A +F+ +MP+ +V+GA+LGA IH E AA+ LF+L
Sbjct: 583 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 642
Query: 612 DPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGNEVHSFVANDRL 671
+P++ GYH+LL+ IY W+ VG++R + + L+K G S++E NEVHSF +
Sbjct: 643 NPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTA 702
Query: 672 HSECDQIYRLLRNLNVNMRDESY 695
H + +IY L L ++++ Y
Sbjct: 703 HPDSKKIYAFLEKLICHIKEAGY 719
BLAST of Cmc04g0110231 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 463.0 bits (1190), Expect = 6.1e-129
Identity = 245/671 (36.51%), Postives = 394/671 (58.72%), Query Frame = 0
Query: 33 GLTHDSFFATKLSALHSKYTSLVQAHKVFDETPTKTVHLWNALLRSYCKENQWKQTLYLF 92
G DS +KLS +++ L +A +VFDE + WN L+ K + ++ LF
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 93 HDMVSYGITKGKPDNYTIPIVLKACAGLQALEFGKMVHGFVEKMEKTDVDMFVGASLIEL 152
M+S G+ + D+YT V K+ + L+++ G+ +HGF+ K + + VG SL+
Sbjct: 184 KKMMSSGV---EMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNS-VGNSLVAF 243
Query: 153 YSKCGKMDEAFQVFLGFSQPDVVMWTSMITGYEQNGNPEKAVDFFSQMVMIEHLNPDPVT 212
Y K ++D A +VF ++ DV+ W S+I GY NG EK + F QM ++ + D T
Sbjct: 244 YLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM-LVSGIEIDLAT 303
Query: 213 LVSLASACTQLSDSKLGSSIHGFMIRRNLDYDLSLANSLLNLYGKTGSVNAAAKLFEEMP 272
+VS+ + C LG ++H ++ + N+LL++Y K G +++A +F EM
Sbjct: 304 IVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 363
Query: 273 TKDVISWSSLIACYSQNGLTAEALNLFNEMIDRKIKFNSVTAVGVLQACAVACNLEEGKR 332
+ V+S++S+IA Y++ GL EA+ LF EM + I + T VL CA L+EGKR
Sbjct: 364 DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKR 423
Query: 333 IHELVTRKGLELDISVSTALIDMYMKCFSPEEALYVFEKMPKKDVVSCAALLSGYSTNGM 392
+HE + L DI VS AL+DMY KC S +EA VF +M KD++S ++ GYS N
Sbjct: 424 VHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCY 483
Query: 393 SFKSMGTFN-TMRLNNIKPDAVAMVKILVSCSDLGILQQALCLHDYVIKTGFTNNIFVGA 452
+ +++ FN + PD + +L +C+ L + +H Y+++ G+ ++ V
Sbjct: 484 ANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN 543
Query: 453 SLIELYSKCGNIVNAMKVFEELKVKDIVTWSAIIAGYGIQGQGREALKLFNKMIETSEVM 512
SL+++Y+KCG ++ A +F+++ KD+V+W+ +IAGYG+ G G+EA+ LFN+M + +
Sbjct: 544 SLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG-IE 603
Query: 513 PNEVTFLSLLSACSHAGLIEEGINIFNMMLHKYRIKPMMEHYSIIVDLLGRTGELDRALN 572
+E++F+SLL ACSH+GL++EG FN+M H+ +I+P +EHY+ IVD+L RTG+L +A
Sbjct: 604 ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYR 663
Query: 573 FVEKMPIPAGPHVWGALLGAACIHHKSELGEIAAKNLFKLDPNNAGYHILLSKIYAVEKN 632
F+E MPIP +WGALL IHH +L E A+ +F+L+P N GY++L++ IYA +
Sbjct: 664 FIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEK 723
Query: 633 WDNVGKLRDMVKEKRLKKMFGESVIEAGNEVHSFVANDRLHSECDQIYRLLRNLNVNMRD 692
W+ V +LR + ++ L+K G S IE V+ FVA D + E + I LR + M +
Sbjct: 724 WEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIE 783
Query: 693 ESYSSNSKSCL 703
E YS +K L
Sbjct: 784 EGYSPLTKYAL 788
BLAST of Cmc04g0110231 vs. ExPASy Swiss-Prot
Match:
Q9M9E2 (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)
HSP 1 Score: 431.4 bits (1108), Expect = 2.0e-119
Identity = 229/663 (34.54%), Postives = 384/663 (57.92%), Query Frame = 0
Query: 46 ALHSKYTSLVQAHKVFDETPTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKP 105
A+ ++ +LV A VF + + + WN L+ Y K+ + + + L+H M+ G KP
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV--KP 196
Query: 106 DNYTIPIVLKACAGLQALEFGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQV 165
D YT P VL+ C G+ L GK VH V + ++D+ V +LI +Y KCG + A +
Sbjct: 197 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRY-GYELDIDVVNALITMYVKCGDVKSARLL 256
Query: 166 FLGFSQPDVVMWTSMITGYEQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSD 225
F + D++ W +MI+GY +NG + ++ F M + ++PD +TL S+ SAC L D
Sbjct: 257 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS-VDPDLMTLTSVISACELLGD 316
Query: 226 SKLGSSIHGFMIRRNLDYDLSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIAC 285
+LG IH ++I D+S+ NSL +Y GS A KLF M KD++SW+++I+
Sbjct: 317 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 376
Query: 286 YSQNGLTAEALNLFNEMIDRKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELD 345
Y N L +A++ + M +K + +T VL ACA +L+ G +H+L + L
Sbjct: 377 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 436
Query: 346 ISVSTALIDMYMKCFSPEEALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRL 405
+ V+ LI+MY KC ++AL +F +P+K+V+S ++++G N F+++ M++
Sbjct: 437 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 496
Query: 406 NNIKPDAVAMVKILVSCSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVN 465
++P+A+ + L +C+ +G L +H +V++TG + F+ +L+++Y +CG +
Sbjct: 497 -TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 556
Query: 466 AMKVFEELKVKDIVTWSAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACS 525
A F K KD+ +W+ ++ GY +GQG ++LF++M++ S V P+E+TF+SLL CS
Sbjct: 557 AWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVK-SRVRPDEITFISLLCGCS 616
Query: 526 HAGLIEEGINIFNMMLHKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVW 585
+ ++ +G+ F+ M Y + P ++HY+ +VDLLGR GEL A F++KMP+ P VW
Sbjct: 617 KSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 676
Query: 586 GALLGAACIHHKSELGEIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEK 645
GALL A IHHK +LGE++A+++F+LD + GY+ILL +YA W V K+R M+KE
Sbjct: 677 GALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKEN 736
Query: 646 RLKKMFGESVIEAGNEVHSFVANDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGT 705
L G S +E +VH+F+++D+ H + +I +L M + + S+S
Sbjct: 737 GLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDE 791
Query: 706 VEI 709
EI
Sbjct: 797 TEI 791
BLAST of Cmc04g0110231 vs. ExPASy Swiss-Prot
Match:
Q9ZQ74 (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E47 PE=3 SV=1)
HSP 1 Score: 422.2 bits (1084), Expect = 1.2e-116
Identity = 226/648 (34.88%), Postives = 373/648 (57.56%), Query Frame = 0
Query: 12 LFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKVFDETPTKTVHL 71
L KC + L Q + GL D ATKL +L+ + A VFD+ P +L
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109
Query: 72 WNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGLQALEFGKMVHG 131
W +LR YC + + + L+ ++ +G + D+ LKAC LQ L+ GK +H
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGF---RYDDIVFSKALKACTELQDLDNGKKIHC 169
Query: 132 FVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSMITGYEQNGNPE 191
+ K+ D + G L+++Y+KCG++ A +VF + +VV WTSMI GY +N E
Sbjct: 170 QLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 229
Query: 192 KAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRNLDYDLSLANSL 251
+ + F++M ++ + T +L ACT+LS G HG +++ ++ L SL
Sbjct: 230 EGLVLFNRM-RENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSL 289
Query: 252 LNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFNEMIDRKIKFNS 311
L++Y K G ++ A ++F E D++ W+++I Y+ NG EAL+LF +M +IK N
Sbjct: 290 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 349
Query: 312 VTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCFSPEEALYVFEK 371
VT VL C + NLE G+ +H L + G+ D +V+ AL+ MY KC+ +A YVFE
Sbjct: 350 VTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEM 409
Query: 372 MPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILVSCSDLGILQQA 431
+KD+V+ +++SG+S NG +++ F+ M ++ P+ V + + +C+ LG L
Sbjct: 410 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 469
Query: 432 LCLHDYVIKTGF--TNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVTWSAIIAGYG 491
LH Y +K GF ++++ VG +L++ Y+KCG+ +A +F+ ++ K+ +TWSA+I GYG
Sbjct: 470 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYG 529
Query: 492 IQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMMLHKYRIKPM 551
QG +L+LF +M++ + PNE TF S+LSAC H G++ EG F+ M Y P
Sbjct: 530 KQGDTIGSLELFEEMLKKQQ-KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPS 589
Query: 552 MEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSELGEIAAKNLF 611
+HY+ +VD+L R GEL++AL+ +EKMPI +GA L +H + +LGEI K +
Sbjct: 590 TKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML 649
Query: 612 KLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIE 658
L P++A Y++L+S +YA + W+ ++R+++K++ L K+ G S +E
Sbjct: 650 DLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
BLAST of Cmc04g0110231 vs. ExPASy TrEMBL
Match:
A0A5A7UUL5 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00170 PE=4 SV=1)
HSP 1 Score: 1416.0 bits (3664), Expect = 0.0e+00
Identity = 709/709 (100.00%), Postives = 709/709 (100.00%), Query Frame = 0
Query: 1 MKSSSRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKV 60
MKSSSRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKV
Sbjct: 1 MKSSSRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKV 60
Query: 61 FDETPTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGL 120
FDETPTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGL
Sbjct: 61 FDETPTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGL 120
Query: 121 QALEFGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSM 180
QALEFGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSM
Sbjct: 121 QALEFGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSM 180
Query: 181 ITGYEQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRN 240
ITGYEQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRN
Sbjct: 181 ITGYEQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRN 240
Query: 241 LDYDLSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFN 300
LDYDLSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFN
Sbjct: 241 LDYDLSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFN 300
Query: 301 EMIDRKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCF 360
EMIDRKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCF
Sbjct: 301 EMIDRKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCF 360
Query: 361 SPEEALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILV 420
SPEEALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILV
Sbjct: 361 SPEEALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILV 420
Query: 421 SCSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVT 480
SCSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVT
Sbjct: 421 SCSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVT 480
Query: 481 WSAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMM 540
WSAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMM
Sbjct: 481 WSAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMM 540
Query: 541 LHKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSEL 600
LHKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSEL
Sbjct: 541 LHKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSEL 600
Query: 601 GEIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGN 660
GEIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGN
Sbjct: 601 GEIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGN 660
Query: 661 EVHSFVANDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGTVEIV 710
EVHSFVANDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGTVEIV
Sbjct: 661 EVHSFVANDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGTVEIV 709
BLAST of Cmc04g0110231 vs. ExPASy TrEMBL
Match:
A0A1S3CMP5 (putative pentatricopeptide repeat-containing protein At3g01580 OS=Cucumis melo OX=3656 GN=LOC103502681 PE=4 SV=1)
HSP 1 Score: 1416.0 bits (3664), Expect = 0.0e+00
Identity = 709/709 (100.00%), Postives = 709/709 (100.00%), Query Frame = 0
Query: 1 MKSSSRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKV 60
MKSSSRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKV
Sbjct: 1 MKSSSRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKV 60
Query: 61 FDETPTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGL 120
FDETPTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGL
Sbjct: 61 FDETPTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGL 120
Query: 121 QALEFGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSM 180
QALEFGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSM
Sbjct: 121 QALEFGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSM 180
Query: 181 ITGYEQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRN 240
ITGYEQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRN
Sbjct: 181 ITGYEQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRN 240
Query: 241 LDYDLSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFN 300
LDYDLSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFN
Sbjct: 241 LDYDLSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFN 300
Query: 301 EMIDRKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCF 360
EMIDRKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCF
Sbjct: 301 EMIDRKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCF 360
Query: 361 SPEEALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILV 420
SPEEALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILV
Sbjct: 361 SPEEALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILV 420
Query: 421 SCSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVT 480
SCSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVT
Sbjct: 421 SCSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVT 480
Query: 481 WSAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMM 540
WSAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMM
Sbjct: 481 WSAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMM 540
Query: 541 LHKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSEL 600
LHKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSEL
Sbjct: 541 LHKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSEL 600
Query: 601 GEIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGN 660
GEIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGN
Sbjct: 601 GEIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGN 660
Query: 661 EVHSFVANDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGTVEIV 710
EVHSFVANDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGTVEIV
Sbjct: 661 EVHSFVANDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGTVEIV 709
BLAST of Cmc04g0110231 vs. ExPASy TrEMBL
Match:
A0A6J1IZM6 (putative pentatricopeptide repeat-containing protein At3g01580 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481394 PE=4 SV=1)
HSP 1 Score: 1224.2 bits (3166), Expect = 0.0e+00
Identity = 605/705 (85.82%), Postives = 657/705 (93.19%), Query Frame = 0
Query: 5 SRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKVFDET 64
SRDQLV+LFEKC SKILA+LQC TLK+GL HD+FFATKLSALH KYTSLVQAHKVF+ET
Sbjct: 3 SRDQLVKLFEKCKCSKILAELQCYTLKIGLAHDTFFATKLSALHGKYTSLVQAHKVFEET 62
Query: 65 PTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGLQALE 124
P+KTVHLWNALLRSYCKE QW QTLYLF+DMVS+GI+ GKPDN+TIPIVLKACAGLQAL+
Sbjct: 63 PSKTVHLWNALLRSYCKEKQWGQTLYLFNDMVSHGISNGKPDNFTIPIVLKACAGLQALK 122
Query: 125 FGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSMITGY 184
FGK VHGF++K EKTD+DMFVGA+LIELYSKCGKM EA QVFL F QPDVV+WTSMITGY
Sbjct: 123 FGKTVHGFIKKNEKTDLDMFVGAALIELYSKCGKMHEALQVFLEFPQPDVVLWTSMITGY 182
Query: 185 EQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRNLDYD 244
EQNGNP+K+VDFFSQMVMIEH+NPDPVTLVSLASACTQLS+SKLGSSIHGF+ RRNLDYD
Sbjct: 183 EQNGNPKKSVDFFSQMVMIEHVNPDPVTLVSLASACTQLSNSKLGSSIHGFITRRNLDYD 242
Query: 245 LSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFNEMID 304
LSLANSLLNLY KTGSV AAA LFE+MP KDVISWSSLIACY+ NG AEALNLFN+MID
Sbjct: 243 LSLANSLLNLYTKTGSVKAAANLFEKMPIKDVISWSSLIACYAHNGAAAEALNLFNKMID 302
Query: 305 RKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCFSPEE 364
+KIKFNSVT +G LQACAVACNLEEGK+IHELVTRKGLELDISVSTALIDMYMKCFSPEE
Sbjct: 303 QKIKFNSVTVIGALQACAVACNLEEGKKIHELVTRKGLELDISVSTALIDMYMKCFSPEE 362
Query: 365 ALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILVSCSD 424
AL VFEKMPKKDVVS AALLSGYS NGMS KSMGTFNTM LNNIKPDAVA+VKIL SCSD
Sbjct: 363 ALVVFEKMPKKDVVSWAALLSGYSLNGMSSKSMGTFNTMLLNNIKPDAVAIVKILASCSD 422
Query: 425 LGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVTWSAI 484
LGILQQALCLHDYV+K+GFTNNIFVGASLIELYSKCG+ VNAMKVFEE+KVKDIVTWSAI
Sbjct: 423 LGILQQALCLHDYVVKSGFTNNIFVGASLIELYSKCGSTVNAMKVFEEMKVKDIVTWSAI 482
Query: 485 IAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMMLHKY 544
IAGYGIQGQGREALKLF+KM ETSEVM NEVTFLSLLSACSHAGLIEEGI IFNMML++Y
Sbjct: 483 IAGYGIQGQGREALKLFHKMRETSEVMANEVTFLSLLSACSHAGLIEEGIKIFNMMLNEY 542
Query: 545 RIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSELGEIA 604
RI+P MEHY I+VDLLGRTGELD+ALNFV+KMPIPAGPHVWGALLG+ACIHHKS+LGEIA
Sbjct: 543 RIEPNMEHYGIVVDLLGRTGELDKALNFVQKMPIPAGPHVWGALLGSACIHHKSDLGEIA 602
Query: 605 AKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGNEVHS 664
A NLFKLDPN+AGY+ILLS IYAVE NW+NVGKLR+M+KEK LKK+ G+SVIEAG+EVHS
Sbjct: 603 ANNLFKLDPNHAGYYILLSNIYAVENNWENVGKLRNMIKEKGLKKILGQSVIEAGSEVHS 662
Query: 665 FVANDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGTVEIV 710
FVA+DRLH + DQIYRLLRNLNVNMRDE YSSNSK+ LQ EIV
Sbjct: 663 FVADDRLHPDSDQIYRLLRNLNVNMRDEGYSSNSKTYLQDIEEIV 707
BLAST of Cmc04g0110231 vs. ExPASy TrEMBL
Match:
A0A6J1F3K2 (putative pentatricopeptide repeat-containing protein At3g01580 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442064 PE=4 SV=1)
HSP 1 Score: 1213.0 bits (3137), Expect = 0.0e+00
Identity = 600/705 (85.11%), Postives = 653/705 (92.62%), Query Frame = 0
Query: 5 SRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKVFDET 64
SRDQLV+LFEKC SK LA+LQC TLK+GL HD+FFATKLSALH KYTSLVQAHKVF+ET
Sbjct: 3 SRDQLVKLFEKCKCSKNLAELQCYTLKIGLAHDTFFATKLSALHGKYTSLVQAHKVFEET 62
Query: 65 PTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGLQALE 124
P+KTVHLWNA+LRSYCKE QW QTLYLF+DMVS+GI+ GKPDN+TIPIVLKACAGLQAL+
Sbjct: 63 PSKTVHLWNAILRSYCKEKQWGQTLYLFNDMVSHGISNGKPDNFTIPIVLKACAGLQALK 122
Query: 125 FGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSMITGY 184
FGK VHGF++K EKTD+DMFVGA+LIELYSKCGKM EA QVFL F QPDVV+WTSMITGY
Sbjct: 123 FGKTVHGFIKKNEKTDLDMFVGAALIELYSKCGKMHEALQVFLEFPQPDVVLWTSMITGY 182
Query: 185 EQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRNLDYD 244
EQNGNP+K+VDFFSQMVMIEH+NPDPVTLVSLASACTQLS+SKLGSSIHGF+ RRNLDY
Sbjct: 183 EQNGNPKKSVDFFSQMVMIEHVNPDPVTLVSLASACTQLSNSKLGSSIHGFITRRNLDYG 242
Query: 245 LSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFNEMID 304
LSLANSLLNLY KTGSV AAA LFE+MP KDVISWSSLIACY+ NG AEALNLFN+MID
Sbjct: 243 LSLANSLLNLYVKTGSVKAAANLFEKMPIKDVISWSSLIACYAHNGAAAEALNLFNKMID 302
Query: 305 RKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCFSPEE 364
+KIKFNSVT +G LQACAV CNLEEGK+IHELV RKGLELDISVSTALIDMYMKCFSPEE
Sbjct: 303 QKIKFNSVTVIGALQACAVECNLEEGKKIHELVIRKGLELDISVSTALIDMYMKCFSPEE 362
Query: 365 ALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILVSCSD 424
AL VFEKMPKKDVVS A LLSGYS NGMS KSMGTFNTM LNNIKPDAVA+VKIL SCSD
Sbjct: 363 ALVVFEKMPKKDVVSWATLLSGYSVNGMSSKSMGTFNTMLLNNIKPDAVAIVKILASCSD 422
Query: 425 LGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVTWSAI 484
LGILQQALCLHDYV+K+GFT+N+FVGASLIELYSKCG+ VNAMKVFEE+KVKDIVTWSAI
Sbjct: 423 LGILQQALCLHDYVVKSGFTDNVFVGASLIELYSKCGSTVNAMKVFEEMKVKDIVTWSAI 482
Query: 485 IAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMMLHKY 544
IAGYGIQGQGREALKLF+KM ETSEVM NEVTFLSLLSACSHAGLIEEGI IFNMML++Y
Sbjct: 483 IAGYGIQGQGREALKLFDKMRETSEVMANEVTFLSLLSACSHAGLIEEGIKIFNMMLNEY 542
Query: 545 RIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSELGEIA 604
RI+P MEHY IIVDLLGRTGEL+RALNFV+KMPIPAGPHVWGALLGAACIHHKS+LGEIA
Sbjct: 543 RIEPNMEHYGIIVDLLGRTGELNRALNFVQKMPIPAGPHVWGALLGAACIHHKSDLGEIA 602
Query: 605 AKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGNEVHS 664
A NLFKLDPN+AGY+ILLS IYAVE NW+NVGKLR+M+KEK LKK+ G+SVIEAG+EVHS
Sbjct: 603 ANNLFKLDPNHAGYYILLSNIYAVENNWENVGKLRNMIKEKGLKKILGQSVIEAGSEVHS 662
Query: 665 FVANDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGTVEIV 710
FVA+DRLH + DQIYRLLRNLNVNMRDE YSSNSK+ LQG EIV
Sbjct: 663 FVADDRLHPKSDQIYRLLRNLNVNMRDEGYSSNSKTYLQGIEEIV 707
BLAST of Cmc04g0110231 vs. ExPASy TrEMBL
Match:
A0A6J1DE08 (putative pentatricopeptide repeat-containing protein At3g01580 OS=Momordica charantia OX=3673 GN=LOC111019914 PE=4 SV=1)
HSP 1 Score: 1185.6 bits (3066), Expect = 0.0e+00
Identity = 584/700 (83.43%), Postives = 645/700 (92.14%), Query Frame = 0
Query: 5 SRDQLVRLFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKVFDET 64
+R++LV+LFEKCN+ KILAQLQC TLK+GL HDSFFATKLSAL++KY SLV A KVFDET
Sbjct: 3 NREELVKLFEKCNNGKILAQLQCHTLKVGLAHDSFFATKLSALYAKYASLVHARKVFDET 62
Query: 65 PTKTVHLWNALLRSYCKENQWKQTLYLFHDMV---SYGITKGKPDNYTIPIVLKACAGLQ 124
P KTVHLWNALLRSYC+ENQW+++L+LFHDMV S+G+T+GKPDN+T+P+VLKACAGLQ
Sbjct: 63 PHKTVHLWNALLRSYCRENQWERSLHLFHDMVSSSSHGVTEGKPDNFTVPVVLKACAGLQ 122
Query: 125 ALEFGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSMI 184
AL+ GK +HGFV++ EKTD+DMFVGA+LIELYSKCGKMDEA QVFLGFSQPDVV+WTSMI
Sbjct: 123 ALKLGKTIHGFVKRNEKTDLDMFVGAALIELYSKCGKMDEALQVFLGFSQPDVVLWTSMI 182
Query: 185 TGYEQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRNL 244
TGYEQNGNPEKAV+FFSQMV+I+H+NPD VTLVSL SACTQLS+SKLGSSIHGF+ RRNL
Sbjct: 183 TGYEQNGNPEKAVEFFSQMVVIKHVNPDRVTLVSLVSACTQLSNSKLGSSIHGFITRRNL 242
Query: 245 DYDLSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFNE 304
DYDLSLANSLLNLY KTGSV +AA LFE+MP KDVISWSSLIACYS NG AEALNLFNE
Sbjct: 243 DYDLSLANSLLNLYAKTGSVKSAANLFEKMPAKDVISWSSLIACYSLNGAAAEALNLFNE 302
Query: 305 MIDRKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCFS 364
MIDRKI+FNSVT +G LQAC VACNLEEGK IH+LVT KGLE+D+SVSTALIDMYMKCFS
Sbjct: 303 MIDRKIEFNSVTVIGALQACGVACNLEEGKTIHKLVTSKGLEMDVSVSTALIDMYMKCFS 362
Query: 365 PEEALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILVS 424
PE+AL VFEKMPKKDVVS AALLSGYS NGMS KSMG FNTM LN IKPDAVAMVKIL S
Sbjct: 363 PEDALDVFEKMPKKDVVSWAALLSGYSQNGMSSKSMGIFNTMLLNRIKPDAVAMVKILAS 422
Query: 425 CSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVTW 484
CSDLGILQQALCLHDYV+K+GFTNNIFVGASLIELYSKCG+IVNAMKVFEE+KVKDIVTW
Sbjct: 423 CSDLGILQQALCLHDYVVKSGFTNNIFVGASLIELYSKCGSIVNAMKVFEEMKVKDIVTW 482
Query: 485 SAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMML 544
SAIIAGYGIQGQGR+ALKLF+KM ETS +MPNEVTF+SLLSACSHAGLIEEGI IFN ML
Sbjct: 483 SAIIAGYGIQGQGRQALKLFHKMTETSRIMPNEVTFISLLSACSHAGLIEEGIKIFNYML 542
Query: 545 HKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSELG 604
H+YRIKP EHY IIVDLLGRTGELDRAL+FV+KMPIPAGPHVWGALLGAACIHHKSELG
Sbjct: 543 HEYRIKPNTEHYGIIVDLLGRTGELDRALDFVQKMPIPAGPHVWGALLGAACIHHKSELG 602
Query: 605 EIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGNE 664
E+AAKNLF+LDPN+AGY+ILLS IYAVEKNWDNVGKLR ++KEK LKKM G+SVIE G+E
Sbjct: 603 EVAAKNLFQLDPNHAGYYILLSNIYAVEKNWDNVGKLRHVIKEKGLKKMLGKSVIEVGSE 662
Query: 665 VHSFVANDRLHSECDQIYRLLRNLNVNMRD--ESYSSNSK 700
VHSFVA+DRLH E DQIYRLL NLNVNMRD E Y+SNSK
Sbjct: 663 VHSFVADDRLHPESDQIYRLLGNLNVNMRDKVEDYNSNSK 702
BLAST of Cmc04g0110231 vs. TAIR 10
Match:
AT3G01580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 705.7 bits (1820), Expect = 3.8e-203
Identity = 334/644 (51.86%), Postives = 473/644 (73.45%), Query Frame = 0
Query: 50 KYTSLVQAHKVFDETPTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYT 109
K++S V A ++F E ++++ WN LL+S +E QW++ LY F M + KPDN+T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFR---DEEKPDNFT 65
Query: 110 IPIVLKACAGLQALEFGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGF 169
+P+ LKAC L+ + +G+M+HGFV+K D++VG+SLI +Y KCG+M EA ++F
Sbjct: 66 LPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL 125
Query: 170 SQPDVVMWTSMITGYEQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLG 229
+PD+V W+SM++G+E+NG+P +AV+FF +MVM + PD VTL++L SACT+LS+S+LG
Sbjct: 126 EKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLG 185
Query: 230 SSIHGFMIRRNLDYDLSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQN 289
+HGF+IRR DLSL NSLLN Y K+ + A LF+ + KDVISWS++IACY QN
Sbjct: 186 RCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQN 245
Query: 290 GLTAEALNLFNEMIDRKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVS 349
G AEAL +FN+M+D + N T + VLQACA A +LE+G++ HEL RKGLE ++ VS
Sbjct: 246 GAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVS 305
Query: 350 TALIDMYMKCFSPEEALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRL-NNI 409
TAL+DMYMKCFSPEEA VF ++P+KDVVS AL+SG++ NGM+ +S+ F+ M L NN
Sbjct: 306 TALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT 365
Query: 410 KPDAVAMVKILVSCSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMK 469
+PDA+ MVK+L SCS+LG L+QA C H YVIK GF +N F+GASL+ELYS+CG++ NA K
Sbjct: 366 RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASK 425
Query: 470 VFEELKVKDIVTWSAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAG 529
VF + +KD V W+++I GYGI G+G +AL+ FN M+++SEV PNEVTFLS+LSACSHAG
Sbjct: 426 VFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAG 485
Query: 530 LIEEGINIFNMMLHKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGAL 589
LI EG+ IF +M++ YR+ P +EHY+++VDLLGR G+LD A+ ++MP P + G L
Sbjct: 486 LIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTL 545
Query: 590 LGAACIHHKSELGEIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLK 649
LGA IH E+ E AK LF+L+ N+AGY++L+S +Y V+ W+NV KLR+ VK++ +K
Sbjct: 546 LGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIK 605
Query: 650 KMFGESVIEAGNEVHSFVANDRLHSECDQIYRLLRNLNVNMRDE 693
K ES+IE +VH FVA+D LH E + +Y LL+ L+++M+++
Sbjct: 606 KGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKED 646
BLAST of Cmc04g0110231 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 465.7 bits (1197), Expect = 6.7e-131
Identity = 244/683 (35.72%), Postives = 398/683 (58.27%), Query Frame = 0
Query: 12 LFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKVFDETPTKTVHL 71
L E+C+S K L Q+ L K GL + FF TKL +L +Y S+ +A +VF+ +K L
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 72 WNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGLQALEFGKMVHG 131
++ +L+ + K + + L F V +P Y +LK C L GK +HG
Sbjct: 103 YHTMLKGFAKVSDLDKALQFF---VRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 162
Query: 132 FVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSMITGYEQNGNPE 191
+ K +D+F L +Y+KC +++EA +VF + D+V W +++ GY QNG
Sbjct: 163 LLVK-SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 222
Query: 192 KAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRNLDYDLSLANSL 251
A++ M E+L P +T+VS+ A + L +G IHG+ +R D ++++ +L
Sbjct: 223 MALEMVKSMCE-ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 282
Query: 252 LNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFNEMIDRKIKFNS 311
+++Y K GS+ A +LF+ M ++V+SW+S+I Y QN EA+ +F +M+D +K
Sbjct: 283 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 342
Query: 312 VTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCFSPEEALYVFEK 371
V+ +G L ACA +LE G+ IH+L GL+ ++SV +LI MY KC + A +F K
Sbjct: 343 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 402
Query: 372 MPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILVSCSDLGILQQA 431
+ + +VS A++ G++ NG ++ F+ MR +KPD V ++ + ++L I A
Sbjct: 403 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 462
Query: 432 LCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVTWSAIIAGYGIQ 491
+H V+++ N+FV +L+++Y+KCG I+ A +F+ + + + TW+A+I GYG
Sbjct: 463 KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTH 522
Query: 492 GQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMMLHKYRIKPMME 551
G G+ AL+LF +M + + PN VTFLS++SACSH+GL+E G+ F MM Y I+ M+
Sbjct: 523 GFGKAALELFEEM-QKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 582
Query: 552 HYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSELGEIAAKNLFKL 611
HY +VDLLGR G L+ A +F+ +MP+ +V+GA+LGA IH E AA+ LF+L
Sbjct: 583 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 642
Query: 612 DPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIEAGNEVHSFVANDRL 671
+P++ GYH+LL+ IY W+ VG++R + + L+K G S++E NEVHSF +
Sbjct: 643 NPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTA 702
Query: 672 HSECDQIYRLLRNLNVNMRDESY 695
H + +IY L L ++++ Y
Sbjct: 703 HPDSKKIYAFLEKLICHIKEAGY 719
BLAST of Cmc04g0110231 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 463.0 bits (1190), Expect = 4.3e-130
Identity = 245/671 (36.51%), Postives = 394/671 (58.72%), Query Frame = 0
Query: 33 GLTHDSFFATKLSALHSKYTSLVQAHKVFDETPTKTVHLWNALLRSYCKENQWKQTLYLF 92
G DS +KLS +++ L +A +VFDE + WN L+ K + ++ LF
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 93 HDMVSYGITKGKPDNYTIPIVLKACAGLQALEFGKMVHGFVEKMEKTDVDMFVGASLIEL 152
M+S G+ + D+YT V K+ + L+++ G+ +HGF+ K + + VG SL+
Sbjct: 184 KKMMSSGV---EMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNS-VGNSLVAF 243
Query: 153 YSKCGKMDEAFQVFLGFSQPDVVMWTSMITGYEQNGNPEKAVDFFSQMVMIEHLNPDPVT 212
Y K ++D A +VF ++ DV+ W S+I GY NG EK + F QM ++ + D T
Sbjct: 244 YLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM-LVSGIEIDLAT 303
Query: 213 LVSLASACTQLSDSKLGSSIHGFMIRRNLDYDLSLANSLLNLYGKTGSVNAAAKLFEEMP 272
+VS+ + C LG ++H ++ + N+LL++Y K G +++A +F EM
Sbjct: 304 IVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 363
Query: 273 TKDVISWSSLIACYSQNGLTAEALNLFNEMIDRKIKFNSVTAVGVLQACAVACNLEEGKR 332
+ V+S++S+IA Y++ GL EA+ LF EM + I + T VL CA L+EGKR
Sbjct: 364 DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKR 423
Query: 333 IHELVTRKGLELDISVSTALIDMYMKCFSPEEALYVFEKMPKKDVVSCAALLSGYSTNGM 392
+HE + L DI VS AL+DMY KC S +EA VF +M KD++S ++ GYS N
Sbjct: 424 VHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCY 483
Query: 393 SFKSMGTFN-TMRLNNIKPDAVAMVKILVSCSDLGILQQALCLHDYVIKTGFTNNIFVGA 452
+ +++ FN + PD + +L +C+ L + +H Y+++ G+ ++ V
Sbjct: 484 ANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN 543
Query: 453 SLIELYSKCGNIVNAMKVFEELKVKDIVTWSAIIAGYGIQGQGREALKLFNKMIETSEVM 512
SL+++Y+KCG ++ A +F+++ KD+V+W+ +IAGYG+ G G+EA+ LFN+M + +
Sbjct: 544 SLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG-IE 603
Query: 513 PNEVTFLSLLSACSHAGLIEEGINIFNMMLHKYRIKPMMEHYSIIVDLLGRTGELDRALN 572
+E++F+SLL ACSH+GL++EG FN+M H+ +I+P +EHY+ IVD+L RTG+L +A
Sbjct: 604 ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYR 663
Query: 573 FVEKMPIPAGPHVWGALLGAACIHHKSELGEIAAKNLFKLDPNNAGYHILLSKIYAVEKN 632
F+E MPIP +WGALL IHH +L E A+ +F+L+P N GY++L++ IYA +
Sbjct: 664 FIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEK 723
Query: 633 WDNVGKLRDMVKEKRLKKMFGESVIEAGNEVHSFVANDRLHSECDQIYRLLRNLNVNMRD 692
W+ V +LR + ++ L+K G S IE V+ FVA D + E + I LR + M +
Sbjct: 724 WEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIE 783
Query: 693 ESYSSNSKSCL 703
E YS +K L
Sbjct: 784 EGYSPLTKYAL 788
BLAST of Cmc04g0110231 vs. TAIR 10
Match:
AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 431.4 bits (1108), Expect = 1.4e-120
Identity = 229/663 (34.54%), Postives = 384/663 (57.92%), Query Frame = 0
Query: 46 ALHSKYTSLVQAHKVFDETPTKTVHLWNALLRSYCKENQWKQTLYLFHDMVSYGITKGKP 105
A+ ++ +LV A VF + + + WN L+ Y K+ + + + L+H M+ G KP
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV--KP 196
Query: 106 DNYTIPIVLKACAGLQALEFGKMVHGFVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQV 165
D YT P VL+ C G+ L GK VH V + ++D+ V +LI +Y KCG + A +
Sbjct: 197 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRY-GYELDIDVVNALITMYVKCGDVKSARLL 256
Query: 166 FLGFSQPDVVMWTSMITGYEQNGNPEKAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSD 225
F + D++ W +MI+GY +NG + ++ F M + ++PD +TL S+ SAC L D
Sbjct: 257 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS-VDPDLMTLTSVISACELLGD 316
Query: 226 SKLGSSIHGFMIRRNLDYDLSLANSLLNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIAC 285
+LG IH ++I D+S+ NSL +Y GS A KLF M KD++SW+++I+
Sbjct: 317 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 376
Query: 286 YSQNGLTAEALNLFNEMIDRKIKFNSVTAVGVLQACAVACNLEEGKRIHELVTRKGLELD 345
Y N L +A++ + M +K + +T VL ACA +L+ G +H+L + L
Sbjct: 377 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 436
Query: 346 ISVSTALIDMYMKCFSPEEALYVFEKMPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRL 405
+ V+ LI+MY KC ++AL +F +P+K+V+S ++++G N F+++ M++
Sbjct: 437 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 496
Query: 406 NNIKPDAVAMVKILVSCSDLGILQQALCLHDYVIKTGFTNNIFVGASLIELYSKCGNIVN 465
++P+A+ + L +C+ +G L +H +V++TG + F+ +L+++Y +CG +
Sbjct: 497 -TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 556
Query: 466 AMKVFEELKVKDIVTWSAIIAGYGIQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACS 525
A F K KD+ +W+ ++ GY +GQG ++LF++M++ S V P+E+TF+SLL CS
Sbjct: 557 AWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVK-SRVRPDEITFISLLCGCS 616
Query: 526 HAGLIEEGINIFNMMLHKYRIKPMMEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVW 585
+ ++ +G+ F+ M Y + P ++HY+ +VDLLGR GEL A F++KMP+ P VW
Sbjct: 617 KSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 676
Query: 586 GALLGAACIHHKSELGEIAAKNLFKLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEK 645
GALL A IHHK +LGE++A+++F+LD + GY+ILL +YA W V K+R M+KE
Sbjct: 677 GALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKEN 736
Query: 646 RLKKMFGESVIEAGNEVHSFVANDRLHSECDQIYRLLRNLNVNMRDESYSSNSKSCLQGT 705
L G S +E +VH+F+++D+ H + +I +L M + + S+S
Sbjct: 737 GLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDE 791
Query: 706 VEI 709
EI
Sbjct: 797 TEI 791
BLAST of Cmc04g0110231 vs. TAIR 10
Match:
AT2G03380.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 422.2 bits (1084), Expect = 8.5e-118
Identity = 226/648 (34.88%), Postives = 373/648 (57.56%), Query Frame = 0
Query: 12 LFEKCNSSKILAQLQCLTLKLGLTHDSFFATKLSALHSKYTSLVQAHKVFDETPTKTVHL 71
L KC + L Q + GL D ATKL +L+ + A VFD+ P +L
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109
Query: 72 WNALLRSYCKENQWKQTLYLFHDMVSYGITKGKPDNYTIPIVLKACAGLQALEFGKMVHG 131
W +LR YC + + + L+ ++ +G + D+ LKAC LQ L+ GK +H
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGF---RYDDIVFSKALKACTELQDLDNGKKIHC 169
Query: 132 FVEKMEKTDVDMFVGASLIELYSKCGKMDEAFQVFLGFSQPDVVMWTSMITGYEQNGNPE 191
+ K+ D + G L+++Y+KCG++ A +VF + +VV WTSMI GY +N E
Sbjct: 170 QLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 229
Query: 192 KAVDFFSQMVMIEHLNPDPVTLVSLASACTQLSDSKLGSSIHGFMIRRNLDYDLSLANSL 251
+ + F++M ++ + T +L ACT+LS G HG +++ ++ L SL
Sbjct: 230 EGLVLFNRM-RENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSL 289
Query: 252 LNLYGKTGSVNAAAKLFEEMPTKDVISWSSLIACYSQNGLTAEALNLFNEMIDRKIKFNS 311
L++Y K G ++ A ++F E D++ W+++I Y+ NG EAL+LF +M +IK N
Sbjct: 290 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 349
Query: 312 VTAVGVLQACAVACNLEEGKRIHELVTRKGLELDISVSTALIDMYMKCFSPEEALYVFEK 371
VT VL C + NLE G+ +H L + G+ D +V+ AL+ MY KC+ +A YVFE
Sbjct: 350 VTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEM 409
Query: 372 MPKKDVVSCAALLSGYSTNGMSFKSMGTFNTMRLNNIKPDAVAMVKILVSCSDLGILQQA 431
+KD+V+ +++SG+S NG +++ F+ M ++ P+ V + + +C+ LG L
Sbjct: 410 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 469
Query: 432 LCLHDYVIKTGF--TNNIFVGASLIELYSKCGNIVNAMKVFEELKVKDIVTWSAIIAGYG 491
LH Y +K GF ++++ VG +L++ Y+KCG+ +A +F+ ++ K+ +TWSA+I GYG
Sbjct: 470 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYG 529
Query: 492 IQGQGREALKLFNKMIETSEVMPNEVTFLSLLSACSHAGLIEEGINIFNMMLHKYRIKPM 551
QG +L+LF +M++ + PNE TF S+LSAC H G++ EG F+ M Y P
Sbjct: 530 KQGDTIGSLELFEEMLKKQQ-KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPS 589
Query: 552 MEHYSIIVDLLGRTGELDRALNFVEKMPIPAGPHVWGALLGAACIHHKSELGEIAAKNLF 611
+HY+ +VD+L R GEL++AL+ +EKMPI +GA L +H + +LGEI K +
Sbjct: 590 TKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML 649
Query: 612 KLDPNNAGYHILLSKIYAVEKNWDNVGKLRDMVKEKRLKKMFGESVIE 658
L P++A Y++L+S +YA + W+ ++R+++K++ L K+ G S +E
Sbjct: 650 DLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_008464928.1 | 0.0e+00 | 100.00 | PREDICTED: putative pentatricopeptide repeat-containing protein At3g01580 [Cucum... | [more] |
| XP_011652303.1 | 0.0e+00 | 96.19 | putative pentatricopeptide repeat-containing protein At3g01580 [Cucumis sativus] | [more] |
| XP_038905362.1 | 0.0e+00 | 86.47 | putative pentatricopeptide repeat-containing protein At3g01580 [Benincasa hispid... | [more] |
| XP_022982551.1 | 0.0e+00 | 85.82 | putative pentatricopeptide repeat-containing protein At3g01580 isoform X1 [Cucur... | [more] |
| KAG7017786.1 | 0.0e+00 | 85.39 | putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9SS97 | 5.4e-202 | 51.86 | Putative pentatricopeptide repeat-containing protein At3g01580 OS=Arabidopsis th... | [more] |
| Q3E6Q1 | 9.4e-130 | 35.72 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
| Q9SN39 | 6.1e-129 | 36.51 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
| Q9M9E2 | 2.0e-119 | 34.54 | Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop... | [more] |
| Q9ZQ74 | 1.2e-116 | 34.88 | Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UUL5 | 0.0e+00 | 100.00 | Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... | [more] |
| A0A1S3CMP5 | 0.0e+00 | 100.00 | putative pentatricopeptide repeat-containing protein At3g01580 OS=Cucumis melo O... | [more] |
| A0A6J1IZM6 | 0.0e+00 | 85.82 | putative pentatricopeptide repeat-containing protein At3g01580 isoform X1 OS=Cuc... | [more] |
| A0A6J1F3K2 | 0.0e+00 | 85.11 | putative pentatricopeptide repeat-containing protein At3g01580 isoform X1 OS=Cuc... | [more] |
| A0A6J1DE08 | 0.0e+00 | 83.43 | putative pentatricopeptide repeat-containing protein At3g01580 OS=Momordica char... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G01580.1 | 3.8e-203 | 51.86 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G11290.1 | 6.7e-131 | 35.72 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G18750.1 | 4.3e-130 | 36.51 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G15510.1 | 1.4e-120 | 34.54 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G03380.1 | 8.5e-118 | 34.88 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
