Cmc04g0110201 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0110201
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr04: 29490176 .. 29491005 (+)
RNA-Seq Expression	Cmc04g0110201
Synteny	Cmc04g0110201

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACGCTTGACAGACAAGGCAAAGTTAGTTGCAAAAGGATTTACTCAGACTTATGGTGTTGATTATTCAGAAACTTTTTCTCCTGTTGCTAAATTGAATACTGTTAGAGTCCTTCTTTCTATTGTCGTAAACAAATATTGGCCTTTATATCAGCTGGATGTTAAAAATGCTTTTCTGAATGGAGATCTAGTAGAGGAGGTCTACATGAGCCCCCGCCTAACTTTGAAACCCAGTTTAGTCAACATGTTTGTAAACTCCAGAAATCTTTATATGATCTGAAACAGTCACCTAAAGCATGGTTTGACAGATTCACTACTTTTGTCAAGTCCCAAGGATACAGTCAAGGACACTCTGATCATACTTTATTTACAAAAGTTTTCAAGATAGGGAAGATTGTAATTCTGATAGTTTATGTGGATGACATCGTTTTGTCTGGAGATGATCAGGCAGAAATCAGTCAACTTAAGCAGAGAATGGGTAATGAATTTGAAATCAAGAATTTGGAAAATCTGAAATATTTCCTTGGAATAGAGGTGGCCAGATCTAAAGAAGGCATCTCCGTGTCTCAAAGAAAATACACCCTTGATCTGCTAACCGAGACAGATATGTTGGGATGTCGTCTCACTGACACTCCTATTGAATTCAATTGCAAACTAGGAAACTCTGATGATCAAGTTCTAGTTGATAATGAACTATATCAGCACCTTGTAGGTAAATTGATTTACTTATCTCATACTTGTCCTGATATTTCCTTTGTTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATAGGAACACATGGAAGCTGTCAAAAGAATTCTGA

mRNA sequence

ATGAAACGCTTGACAGACAAGGCAAAGTTAGTTGCAAAAGGATTTACTCAGACTTATGGTGTTGATTATTCAGAAACTTTTTCTCCTGTTGCTAAATTGAATACTGTTAGAGTCCTTCTTTCTATTGTCGTAAACAAATATTGGCCTTTATATCAGCTGGATGTTAAAAATGCTTTTCTGAATGGAGATCTAGTAGAGGAGTCACCTAAAGCATGGTTTGACAGATTCACTACTTTTGTCAAGTCCCAAGGATACAGTCAAGGACACTCTGATCATACTTTATTTACAAAAGTTTTCAAGATAGGGAAGATTGTAATTCTGATAGTTTATGTGGATGACATCGTTTTGTCTGGAGATGATCAGGCAGAAATCAGTCAACTTAAGCAGAGAATGGGTAATGAATTTGAAATCAAGAATTTGGAAAATCTGAAATATTTCCTTGGAATAGAGGTGGCCAGATCTAAAGAAGGCATCTCCGTGTCTCAAAGAAAATACACCCTTGATCTGCTAACCGAGACAGATATGTTGGGATGTCGTCTCACTGACACTCCTATTGAATTCAATTGCAAACTAGGAAACTCTGATGATCAAGTTCTAGTTGATAATGAACTATATCAGCACCTTGTAGGTAAATTGATTTACTTATCTCATACTTGTCCTGATATTTCCTTTGTTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATAGGAACACATGGAAGCTGTCAAAAGAATTCTGA

Coding sequence (CDS)

ATGAAACGCTTGACAGACAAGGCAAAGTTAGTTGCAAAAGGATTTACTCAGACTTATGGTGTTGATTATTCAGAAACTTTTTCTCCTGTTGCTAAATTGAATACTGTTAGAGTCCTTCTTTCTATTGTCGTAAACAAATATTGGCCTTTATATCAGCTGGATGTTAAAAATGCTTTTCTGAATGGAGATCTAGTAGAGGAGTCACCTAAAGCATGGTTTGACAGATTCACTACTTTTGTCAAGTCCCAAGGATACAGTCAAGGACACTCTGATCATACTTTATTTACAAAAGTTTTCAAGATAGGGAAGATTGTAATTCTGATAGTTTATGTGGATGACATCGTTTTGTCTGGAGATGATCAGGCAGAAATCAGTCAACTTAAGCAGAGAATGGGTAATGAATTTGAAATCAAGAATTTGGAAAATCTGAAATATTTCCTTGGAATAGAGGTGGCCAGATCTAAAGAAGGCATCTCCGTGTCTCAAAGAAAATACACCCTTGATCTGCTAACCGAGACAGATATGTTGGGATGTCGTCTCACTGACACTCCTATTGAATTCAATTGCAAACTAGGAAACTCTGATGATCAAGTTCTAGTTGATAATGAACTATATCAGCACCTTGTAGGTAAATTGATTTACTTATCTCATACTTGTCCTGATATTTCCTTTGTTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATAGGAACACATGGAAGCTGTCAAAAGAATTCTGA

Protein sequence

MKRLTDKAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEESPKAWFDRFTTFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPYRNTWKLSKEF

Homology

[Close]

BLAST of Cmc04g0110201 vs. NCBI nr
Match: TYK31050.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 398.7 bits (1023), Expect = 3.7e-107
Identity = 207/260 (79.62%), Postives = 215/260 (82.69%), Query Frame = 0


Query: 7    KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVE 66
            KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVE
Sbjct: 1160 KARLVAKGFTQTYGIDYSETFSPVAKLNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLVE 1219

Query: 67   E-----------------------------SPKAWFDRFTTFVKSQGYSQGHSDHTLFTK 126
            E                             SP+AWFDRFTTFVKSQGYSQGHSDHTLFTK
Sbjct: 1220 EVYMSPPPGFEAQFGQEVCKLQKSLYGLKQSPRAWFDRFTTFVKSQGYSQGHSDHTLFTK 1279

Query: 127  VFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEG 186
              K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEG
Sbjct: 1280 ASKTGKIAILIVYVDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEG 1339

Query: 187  ISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSH 238
            ISVSQRKYTLDLLTET MLGCR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSH
Sbjct: 1340 ISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSH 1399

[Close]

BLAST of Cmc04g0110201 vs. NCBI nr
Match: KAA0035474.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 398.7 bits (1023), Expect = 3.7e-107
Identity = 207/260 (79.62%), Postives = 215/260 (82.69%), Query Frame = 0


Query: 7    KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVE 66
            KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVE
Sbjct: 971  KARLVAKGFTQTYGIDYSETFSPVAKLNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLVE 1030

Query: 67   E-----------------------------SPKAWFDRFTTFVKSQGYSQGHSDHTLFTK 126
            E                             SP+AWFDRFTTFVKSQGYSQGHSDHTLFTK
Sbjct: 1031 EVYMSPPPGFEAQFGQEVCKLQKSLYGLKQSPRAWFDRFTTFVKSQGYSQGHSDHTLFTK 1090

Query: 127  VFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEG 186
              K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEG
Sbjct: 1091 ASKTGKIAILIVYVDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEG 1150

Query: 187  ISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSH 238
            ISVSQRKYTLDLLTET MLGCR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSH
Sbjct: 1151 ISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSH 1210

[Close]

BLAST of Cmc04g0110201 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 397.1 bits (1019), Expect = 1.1e-106
Identity = 206/260 (79.23%), Postives = 214/260 (82.31%), Query Frame = 0


Query: 7    KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVE 66
            KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVE
Sbjct: 1156 KARLVAKGFTQTYGIDYSETFSPVAKLNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLVE 1215

Query: 67   E-----------------------------SPKAWFDRFTTFVKSQGYSQGHSDHTLFTK 126
            E                             SP+AWFDRFTTFVKSQGYSQGHSDHTLFTK
Sbjct: 1216 EVYMSPPPGFEAQFGQEVCKLQKSLYGLKQSPRAWFDRFTTFVKSQGYSQGHSDHTLFTK 1275

Query: 127  VFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEG 186
              K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEG
Sbjct: 1276 ASKTGKIAILIVYVDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEG 1335

Query: 187  ISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSH 238
            ISVSQRKYTLDLLTET MLGCR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSH
Sbjct: 1336 ISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSH 1395

[Close]

BLAST of Cmc04g0110201 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 397.1 bits (1019), Expect = 1.1e-106
Identity = 206/260 (79.23%), Postives = 214/260 (82.31%), Query Frame = 0


Query: 7    KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVE 66
            KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVE
Sbjct: 1130 KARLVAKGFTQTYGIDYSETFSPVAKLNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLVE 1189

Query: 67   E-----------------------------SPKAWFDRFTTFVKSQGYSQGHSDHTLFTK 126
            E                             SP+AWFDRFTTFVKSQGYSQGHSDHTLFTK
Sbjct: 1190 EVYMSPPPGFEAQFGQEVCKLQKSLYGLKQSPRAWFDRFTTFVKSQGYSQGHSDHTLFTK 1249

Query: 127  VFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEG 186
              K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEG
Sbjct: 1250 ASKTGKIAILIVYVDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEG 1309

Query: 187  ISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSH 238
            ISVSQRKYTLDLLTET MLGCR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSH
Sbjct: 1310 ISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSH 1369

[Close]

BLAST of Cmc04g0110201 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 397.1 bits (1019), Expect = 1.1e-106
Identity = 206/260 (79.23%), Postives = 214/260 (82.31%), Query Frame = 0


Query: 7    KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVE 66
            KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVE
Sbjct: 1156 KARLVAKGFTQTYGIDYSETFSPVAKLNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLVE 1215

Query: 67   E-----------------------------SPKAWFDRFTTFVKSQGYSQGHSDHTLFTK 126
            E                             SP+AWFDRFTTFVKSQGYSQGHSDHTLFTK
Sbjct: 1216 EVYMSPPPGFEAQFGQEVCKLQKSLYGLKQSPRAWFDRFTTFVKSQGYSQGHSDHTLFTK 1275

Query: 127  VFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEG 186
              K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEG
Sbjct: 1276 ASKTGKIAILIVYVDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEG 1335

Query: 187  ISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSH 238
            ISVSQRKYTLDLLTET MLGCR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSH
Sbjct: 1336 ISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSH 1395

[Close]

BLAST of Cmc04g0110201 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 7.2e-45
Identity = 101/270 (37.41%), Postives = 152/270 (56.30%), Query Frame = 0


Query: 7    KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVE 66
            KA+LVAKG+ Q  G+DY+ETFSPV K  ++R++L + V++ WP+ QLDV NAFL G L +
Sbjct: 1001 KARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTD 1060

Query: 67   E------------------------------SPKAWFDRFTTFVKSQGYSQGHSDHTLFT 126
            E                              +P+AW+    T++ + G+    SD +LF 
Sbjct: 1061 EVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLF- 1120

Query: 127  KVFKIGK-IVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSK 186
             V + G+ I+ ++VYVDDI+++G+D   +      +   F +K  E+L YFLGIE  R  
Sbjct: 1121 -VLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVP 1180

Query: 187  EGISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYL 246
            +G+ +SQR+YTLDLL  T+ML  +   TP+  + KL       L D   Y+ +VG L YL
Sbjct: 1181 QGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYL 1240

[Close]

BLAST of Cmc04g0110201 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-42
Identity = 99/261 (37.93%), Postives = 147/261 (56.32%), Query Frame = 0


Query: 7    KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDL-- 66
            KA+LVAKG+ Q  G+DY+ETFSPV K  ++R++L + V++ WP+ QLDV NAFL G L  
Sbjct: 1018 KARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTD 1077

Query: 67   ----------------------------VEESPKAWFDRFTTFVKSQGYSQGHSDHTLFT 126
                                        ++++P+AW+     ++ + G+    SD +LF 
Sbjct: 1078 DVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLF- 1137

Query: 127  KVFKIGK-IVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSK 186
             V + GK IV ++VYVDDI+++G+D   +      +   F +K+ E L YFLGIE  R  
Sbjct: 1138 -VLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVP 1197

Query: 187  EGISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYL 237
             G+ +SQR+Y LDLL  T+M+  +   TP+  + KL       L D   Y+ +VG L YL
Sbjct: 1198 TGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYL 1257

[Close]

BLAST of Cmc04g0110201 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.4e-34
Identity = 89/278 (32.01%), Postives = 145/278 (52.16%), Query Frame = 0


Query: 7    KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVE 66
            KA+LV KGF Q  G+D+ E FSPV K+ ++R +LS+  +    + QLDVK AFL+GDL E
Sbjct: 875  KARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEE 934

Query: 67   E------------------------------SPKAWFDRFTTFVKSQGYSQGHSDHTLFT 126
            E                              +P+ W+ +F +F+KSQ Y + +SD  ++ 
Sbjct: 935  EIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYF 994

Query: 127  KVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKE 186
            K F     +IL++YVDD+++ G D+  I++LK  +   F++K+L   +  LG+++ R + 
Sbjct: 995  KRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERT 1054

Query: 187  G--ISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNSDDQVLVDNE------LYQHL 246
               + +SQ KY   +L   +M   +   TP+  + KL        V+ +       Y   
Sbjct: 1055 SRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSA 1114

[Close]

BLAST of Cmc04g0110201 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 132.9 bits (333), Expect = 5.0e-30
Identity = 78/268 (29.10%), Postives = 141/268 (52.61%), Query Frame = 0


Query: 7    KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVE 66
            KA+LVA+GFTQ Y +DY ETF+PVA++++ R +LS+V+     ++Q+DVK AFLNG L E
Sbjct: 955  KARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKE 1014

Query: 67   E----------------------------SPKAWFDRFTTFVKSQGYSQGHSDHTLF-TK 126
            E                            + + WF+ F   +K   +     D  ++   
Sbjct: 1015 EIYMRLPQGISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILD 1074

Query: 127  VFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEG 186
               I + + +++YVDD+V++  D   ++  K+ +  +F + +L  +K+F+GI +   ++ 
Sbjct: 1075 KGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDK 1134

Query: 187  ISVSQRKYTLDLLTETDMLGCRLTDTPI--EFNCKLGNSDDQVLVDNELYQHLVGKLIYL 243
            I +SQ  Y   +L++ +M  C    TP+  + N +L NSD+     N   + L+G L+Y+
Sbjct: 1135 IYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDC---NTPCRSLIGCLMYI 1194

[Close]

BLAST of Cmc04g0110201 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.0e-14
Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = 0


Query: 107 LIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYT 166
           L++YVDDI+L+G     ++ L  ++ + F +K+L  + YFLGI++     G+ +SQ KY 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 167 LDLLTETDMLGCRLTDTPIEFNCKLGNS-DDQVLVDNELYQHLVGKLIYLSHTCPDISFV 226
             +L    ML C+   TP+    KL +S       D   ++ +VG L YL+ T PDIS+ 
Sbjct: 63  EQILNNAGMLDCKPMSTPLPL--KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 122

Query: 227 VSVVSQFMQAP 237
           V++V Q M  P
Sbjct: 123 VNIVCQRMHEP 131

[Close]

BLAST of Cmc04g0110201 vs. ExPASy TrEMBL
Match: A0A5D3E603 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003080 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.8e-107
Identity = 207/260 (79.62%), Postives = 215/260 (82.69%), Query Frame = 0


Query: 7    KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVE 66
            KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVE
Sbjct: 1160 KARLVAKGFTQTYGIDYSETFSPVAKLNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLVE 1219

Query: 67   E-----------------------------SPKAWFDRFTTFVKSQGYSQGHSDHTLFTK 126
            E                             SP+AWFDRFTTFVKSQGYSQGHSDHTLFTK
Sbjct: 1220 EVYMSPPPGFEAQFGQEVCKLQKSLYGLKQSPRAWFDRFTTFVKSQGYSQGHSDHTLFTK 1279

Query: 127  VFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEG 186
              K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEG
Sbjct: 1280 ASKTGKIAILIVYVDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEG 1339

Query: 187  ISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSH 238
            ISVSQRKYTLDLLTET MLGCR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSH
Sbjct: 1340 ISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSH 1399

[Close]

BLAST of Cmc04g0110201 vs. ExPASy TrEMBL
Match: A0A5A7SW06 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G001210 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.8e-107
Identity = 207/260 (79.62%), Postives = 215/260 (82.69%), Query Frame = 0


Query: 7    KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVE 66
            KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVE
Sbjct: 971  KARLVAKGFTQTYGIDYSETFSPVAKLNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLVE 1030

Query: 67   E-----------------------------SPKAWFDRFTTFVKSQGYSQGHSDHTLFTK 126
            E                             SP+AWFDRFTTFVKSQGYSQGHSDHTLFTK
Sbjct: 1031 EVYMSPPPGFEAQFGQEVCKLQKSLYGLKQSPRAWFDRFTTFVKSQGYSQGHSDHTLFTK 1090

Query: 127  VFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEG 186
              K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEG
Sbjct: 1091 ASKTGKIAILIVYVDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEG 1150

Query: 187  ISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSH 238
            ISVSQRKYTLDLLTET MLGCR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSH
Sbjct: 1151 ISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSH 1210

[Close]

BLAST of Cmc04g0110201 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 5.3e-107
Identity = 206/260 (79.23%), Postives = 214/260 (82.31%), Query Frame = 0


Query: 7    KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVE 66
            KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVE
Sbjct: 1156 KARLVAKGFTQTYGIDYSETFSPVAKLNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLVE 1215

Query: 67   E-----------------------------SPKAWFDRFTTFVKSQGYSQGHSDHTLFTK 126
            E                             SP+AWFDRFTTFVKSQGYSQGHSDHTLFTK
Sbjct: 1216 EVYMSPPPGFEAQFGQEVCKLQKSLYGLKQSPRAWFDRFTTFVKSQGYSQGHSDHTLFTK 1275

Query: 127  VFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEG 186
              K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEG
Sbjct: 1276 ASKTGKIAILIVYVDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEG 1335

Query: 187  ISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSH 238
            ISVSQRKYTLDLLTET MLGCR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSH
Sbjct: 1336 ISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSH 1395

[Close]

BLAST of Cmc04g0110201 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 5.3e-107
Identity = 206/260 (79.23%), Postives = 214/260 (82.31%), Query Frame = 0


Query: 7    KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVE 66
            KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVE
Sbjct: 1156 KARLVAKGFTQTYGIDYSETFSPVAKLNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLVE 1215

Query: 67   E-----------------------------SPKAWFDRFTTFVKSQGYSQGHSDHTLFTK 126
            E                             SP+AWFDRFTTFVKSQGYSQGHSDHTLFTK
Sbjct: 1216 EVYMSPPPGFEAQFGQEVCKLQKSLYGLKQSPRAWFDRFTTFVKSQGYSQGHSDHTLFTK 1275

Query: 127  VFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEG 186
              K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEG
Sbjct: 1276 ASKTGKIAILIVYVDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEG 1335

Query: 187  ISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSH 238
            ISVSQRKYTLDLLTET MLGCR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSH
Sbjct: 1336 ISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSH 1395

[Close]

BLAST of Cmc04g0110201 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 5.3e-107
Identity = 206/260 (79.23%), Postives = 214/260 (82.31%), Query Frame = 0


Query: 7    KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVE 66
            KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVE
Sbjct: 1156 KARLVAKGFTQTYGIDYSETFSPVAKLNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLVE 1215

Query: 67   E-----------------------------SPKAWFDRFTTFVKSQGYSQGHSDHTLFTK 126
            E                             SP+AWFDRFTTFVKSQGYSQGHSDHTLFTK
Sbjct: 1216 EVYMSPPPGFEAQFGQEVCKLQKSLYGLKQSPRAWFDRFTTFVKSQGYSQGHSDHTLFTK 1275

Query: 127  VFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEG 186
              K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEG
Sbjct: 1276 ASKTGKIAILIVYVDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEG 1335

Query: 187  ISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSH 238
            ISVSQRKYTLDLLTET MLGCR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSH
Sbjct: 1336 ISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSH 1395

[Close]

BLAST of Cmc04g0110201 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 191.8 bits (486), Expect = 6.5e-49
Identity = 104/264 (39.39%), Postives = 157/264 (59.47%), Query Frame = 0


Query: 7   KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVE 66
           KA+LVAKG+TQ  G+D+ ETFSPV KL +V+++L+I     + L+QLD+ NAFLNGDL E
Sbjct: 147 KARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDE 206

Query: 67  E----------------------------------SPKAWFDRFTTFVKSQGYSQGHSDH 126
           E                                  + + WF +F+  +   G+ Q HSDH
Sbjct: 207 EIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDH 266

Query: 127 TLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVA 186
           T F K+      + ++VYVDDI++  ++ A + +LK ++ + F++++L  LKYFLG+E+A
Sbjct: 267 TYFLKI-TATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA 326

Query: 187 RSKEGISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKL 237
           RS  GI++ QRKY LDLL ET +LGC+ +  P++ +           VD + Y+ L+G+L
Sbjct: 327 RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRL 386

[Close]

BLAST of Cmc04g0110201 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 7.2e-16
Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = 0


Query: 107 LIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYT 166
           L++YVDDI+L+G     ++ L  ++ + F +K+L  + YFLGI++     G+ +SQ KY 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 167 LDLLTETDMLGCRLTDTPIEFNCKLGNS-DDQVLVDNELYQHLVGKLIYLSHTCPDISFV 226
             +L    ML C+   TP+    KL +S       D   ++ +VG L YL+ T PDIS+ 
Sbjct: 63  EQILNNAGMLDCKPMSTPLPL--KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 122

Query: 227 VSVVSQFMQAP 237
           V++V Q M  P
Sbjct: 123 VNIVCQRMHEP 131

[Close]

BLAST of Cmc04g0110201 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 42.0 bits (97), Expect = 8.3e-04
Identity = 18/36 (50.00%), Postives = 27/36 (75.00%), Query Frame = 0


Query: 7   KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSI 43
           KA+LVAKGF Q  G+ + ET+SPV +  T+R +L++
Sbjct: 89  KARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124

The following BLAST results are available for this feature:

BLAST of Cmc04g0110201 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK31050.1	3.7e-107	79.62	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0035474.1	3.7e-107	79.62	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYJ99952.1	1.1e-106	79.23	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
KAA0031941.1	1.1e-106	79.23	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK08054.1	1.1e-106	79.23	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0110201 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	7.2e-45	37.41	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.2e-42	37.93	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P10978	4.4e-34	32.01	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	5.0e-30	29.10	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92519	1.0e-14	35.88	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc04g0110201 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E603	1.8e-107	79.62	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G0...	[more]
A0A5A7SW06	1.8e-107	79.62	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G0...	[more]
A0A5D3BJK7	5.3e-107	79.23	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	5.3e-107	79.23	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	5.3e-107	79.23	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]

BLAST of Cmc04g0110201 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	6.5e-49	39.39	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	7.2e-16	35.88	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	8.3e-04	50.00	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 67..185 e-value: 2.0E-22 score: 80.0
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 7..241
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 8..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0110201.1	Cmc04g0110201.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003676	nucleic acid binding