Cmc04g0110091 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0110091
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	CMiso1.1chr04: 29405545 .. 29410131 (-)
RNA-Seq Expression	Cmc04g0110091
Synteny	Cmc04g0110091

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATCGAACTCGCGCACAAACGGGAGGGTTTTGGTGAGAAGCTCGTAGGAGAAACAGAGTGAGCTTCATTTCTCGTCGCTCCGTCTATCGATTTCAGTGTCAATGAAGCTCCTTCAATCTGTCGCCGGTTCTGCTCCGTCACCATGAAAGAAGTTCTTCAGTTCTTTATCTCCGTTCATTATTTTTAGCTTACACGTTCCTCGTTCTTCCATTTATGTTCAGGTCAAAGCCGCTCGCTTGTCCGTTTTCTTGGACAGCGTCGATCTTTTGCTGTTTCTACGGAAGAGTACAGAAAACGGAATTACGCTGATAATGTTTCCGAGTACAAAACCGTTATTGCCTCCCTCACTTCCCAGAGAAGGTCTTCTTTCTTTCTTTGATTGATTGATTTGTTGTTCTTTTTATTCGTGGGTATTTAAAGTGGTTTGTTGTTCAATACGTTTCTGGTTTAGGTACTTCTCATTGAGGGATGTGTATGACGATATGATGTTGGATGGAGTGCAGCCTACAATGGACGTTTTCCACTTACTGATAACTGGAACCATGAAAGGCGCTCGTTTCCAACATGCTTTTTTCTTCAGGGATGAAATGAAGGCCATGGGTTTGATTCCTGATGTAGGTAACTTCTTGAATATCAATTGAGTCTTTTTGGCCATGCTTTCACTATGCTTGGCTCTTCGGATTGATCATTACCTTTTTTCTGTACTTGCATATATGTTTTGCAGGTTAGTCTGTATAACATGCTGATCTCATTATGTGGTAAATGTAACAACTCTGAAGAGGCTGTCCGGGTAGGTTTCTATATGTTTTTAAAATGTTGTTTTGGAAGTTTGAAGGAAAATCTGGACCCGTCTTTTAATTGTCAACTATTGTATATTTAAATTGAAGATCTTAGATGAGATGAGGAGATATGAAGTGAAGCCAAATTCACAGACGTACATCTGTCTACTTAATGCTTGTGCAGCTGCTGGTAGATTAGATCGCGTGTATGCTACTTCTTTCACAACCTAACCTTTTATCATTCAGCCTGCAAGGGTTATAGTCGTGTTTATTGATTTATGTCATGTATAAATGGATGAGAGTAAAGTTCTCACCAGTAAATTCACTTATTTTCTACTTGATTGGTTTAATAGTTGTCTGACATTTTTTATCAATATATTAGGTATACGATTGTCAGAGATATGACTTCTGCTGGCCTTGGCTTAAACAAGTTCTGCTATGCTGGACTTATAGCTGCACATATGAACAAGAAACCTGTGGCAGATGATTTTGCTACTAAAGTAAAAATCATCTCAGCTGTTCTTTATGTCCTTGTTAATGTGCGGTTTGTGATATATCAATACAGTGCTACTTTTCTATGATTAGGTGGTTGAATTTGTTGAACGGTCAAAGGAATGGTTATCGGTTGATGCATCAAGTGTAACAGCTGAAAATGTAATGATGGGTGTTTCAGAAGAGGAATTGTACAATATTCCGACTGCTGAATATGTTCATAGACGTGGAGGATTTTTGAACAAACAGTTGACTATTTATCATGTTGCTTTAAATGCTTGTGCAAATCTCAAGAATGTGGAGGTATCTAACTCATAATTTCACGATATTTGGATTTATATTATTGGATAAACTTAATCAGATTAGGGTCTCTTTATTTCAGTTATGTTCTACATATATGATTAGTTGAGCCATTCTGCTATTGTTAGGTCTCCTGATAATTAATAACATTATTTCTTACATAGTAGATGCCATCTATTCTCCTTTATAACTTAATTTTTATCAAGTGTTTTCATATATTACGTGTAAACTTCCTCATCGTGTATTTTCATATAAAATATTTTTTTTGTTTCTTATCAGTTTTTTCTTTCTTACAATCTAAGTAGGTTATGGAGACCATAATGGATATGTTAAAGAAGGATGGAAAAACTCCCGATGTCTACATAATAATGCAAGTCATGAGGTAAAGGGCTAAGTCCAAAAATTAAATTCTGTTGTCTCTCAGTCCAAGAATTAAATTCTGTTGTCTATGGCTCCATGGCTCCATGCAGTTTCTAATTAAATGTCAAGGCATAGATCAATTTGATCGGACTATTGCATTCATTGCATGGGAATCACTCATAATTACCCCACTAGTAGAAAGTCAGCAATTTTGTTTGATTGAGTTGGTTTTCTTTAGCTGTTCATTAGTTTGCTTCTTGTTTTGATGAGAATGACCAGGGCCATAAATTTTAAAGATCAGCTTGTTATATGATTATAACTATAAAGTATGTGTAGATCTAATGGAACTACTGATTTGGCCTTGTTTGTGCATTTGTCTGCCATTGATTAAGCTTAATCTAACATGATCGCAAGTTGAGTGTTTTTTTTTTGTATGGATTATGATACACTAGTGATGGGTGCTTGCGTTGGATTGATTATGTTACTGTAGCGGTTCCTGTGATCATTCACTTTTTGTCTCTAACATGCGCTGTTTAGTAGCTTTTGTATGGGTGCTTTCTTGTATTTTCATATACTTGTCATGTAGCTTTAATGAAAGTTGTGAGGATTGTACATCAGCACTAAGTATAGGTTGCAGTCGTGTTGTTTCATTAGTTTTGACATCTCATTTGTAGGATTCTTGGTTATTAGAATTCCTACCCACTCGGTGATTTTTTCTGTTCTTCTATTGAAATCACAATGTAACCCACTCCATGTTTATTGGAAGAAGTGCTAATAGTCTAATACAGATTTTCATCTAAATAGATGTGTAGAGTTTGAGGCTTAATTATAAAATTGATTATTTAGGACATAGGATGGATGAGTTTTTCTATGATTTGACAGTTAACTTCTAACAGGTGCTATCTACATTCTGGAGATATTGATCGTGGTCATAAAGCTTTTGAGGAGCACTTAAATTCTGGGGGTTCTGTAGCAGCTGAACTCTATTCAGTGAGTTTGGACCAACTATGTTTCTGGCTTCTGCTTTTACAGCATTAAAATATTACTCCATATTAACTGTTCTTAACCAAAAAGGAGATATCCTTATATATATATATATTCTACTGTCCATCTACACGTTTTCTGCTTTCTTTGGAAATTCCTAAAAATCTAGAGAGACAGTTAACTTTTTCCAATATATTTCATCTTCCTTGCAAAAGAGATTGCTGTAGTATAGACACTTCAAACGAACAATATGAGAGTCTTTATTAGTAAGCATTCAAGGTAACTACTGCGGATATTTAGCTATGGTTTTCATTTGGCTGTAGACGCTTGTGGAAGGAGCCATGATTGGTTATACACCAAAGGGAATGCAATTGGCTCAAGAAACACTGGTAACTTCCAATTTCTACTGAAGTTACAATTGAAATTGACTTGATCTTAGTAATGCGATGTTGATTATTGCTTATTGCAGGAAAACATGAATTCCAGGGGCTTTTTCTTGAACGCCAGATTAGGAAGTGAGCTCCTCCTTGCAGCAGCGGGTGAAAAGGTAGGCCGACGGTTTATTACATTTTAGTTCACAAGAGACCATTGTGGGTAGCAATTGGCTACTTCAAAATTCTTACATTTATTATTTCGAGGTCCATATGATTCAAAATATGAGTTTAATTTTTTCATATTCCCATGCAGACTGGTGGTTATACAACTGCCAATTATATATGGGACCTCTTGCAAGCTCGACAGATAACTCCTTCATTCGCTGCTGTGGACGCTTATTACAGGGGATTGAAGGTACTTCTCTCTCCATGATCTTTAATTCTTTTGTTATGAAATTTGTTATTCCTGTGTTGATGTTTGATAATTAATACAAATATTATTATGGGTTGGCTTAGTGGTACAAAGGGAGACATAGTCTCAATAACTAACTAAGAGATCATGGGTTTAATTTATGGTGGTCACCTACTTAAGCGGGTTGTCCCGTGTCAGTCATTCACTGATATAAAAAAATGAATATTTGATAATTAATACATGCAACTTCCCTTTACTAGTAATTGAGGTCTGGTTGAGTTGAGATTCGTCAAGTAATTCCATTTTATTCTTGTGTATTCGTGCAACTAGCTGAAAGACAATATACTGACCATTCAAAGTGTAATTACAACATTTGATTTTAAATGGTTTGCTAGGTTGAATCAAACCTTAGGTCAAGTTCTCTTATCATTTAATAACGGTGACATTTTAAATTTCAAAATGCAGGATCGTGAGATTCCAGAAGATGACGCTAGGCTTTTATTAGTTTCTCGAATCCACGAAAATCTTCGAGCCAGATTTGGTGGCGACCGAGCATAATCTAAATCAGATTTGGTGTCTCCACATTGAGAATAATTTATGCTCCAATTTTAATTGATTCTTCCATCAGTTGAAGGTATGCATTATGATGTGTATCCAACGGTCTATAGGTGTTTAAGCCTTTAGAATTATGTATTTTGAATAGTGAAAGTGGAGATTTGATAGCAAGTTTTGAGTACTTATTTTGGCCTAGATTTAATTTTAATTTTAGTATTACTTTCAAAGAATTACAAGTTTGGATTCCAGTTTCTTTCTTTTGTGTATATTATTATACATAGTGGTTTAAGTTTCATTATTATCCCCCCAACTGTTTTTGGTAAGGTCTAT

mRNA sequence

TCATCGAACTCGCGCACAAACGGGAGGGTTTTGGTGAGAAGCTCGTAGGAGAAACAGAGTGAGCTTCATTTCTCGTCGCTCCGTCTATCGATTTCAGTGTCAATGAAGCTCCTTCAATCTGTCGCCGGTCAAAGCCGCTCGCTTGTCCGTTTTCTTGGACAGCGTCGATCTTTTGCTGTTTCTACGGAAGAGTACAGAAAACGGAATTACGCTGATAATGTTTCCGAGTACAAAACCGTTATTGCCTCCCTCACTTCCCAGAGAAGGTACTTCTCATTGAGGGATGTGTATGACGATATGATGTTGGATGGAGTGCAGCCTACAATGGACGTTTTCCACTTACTGATAACTGGAACCATGAAAGGCGCTCGTTTCCAACATGCTTTTTTCTTCAGGGATGAAATGAAGGCCATGGGTTTGATTCCTGATGTTAGTCTGTATAACATGCTGATCTCATTATGTGGTAAATGTAACAACTCTGAAGAGGCTGTCCGGATCTTAGATGAGATGAGGAGATATGAAGTGAAGCCAAATTCACAGACGTACATCTGTCTACTTAATGCTTGTGCAGCTGCTGGTAGATTAGATCGCGTGTATACGATTGTCAGAGATATGACTTCTGCTGGCCTTGGCTTAAACAAGTTCTGCTATGCTGGACTTATAGCTGCACATATGAACAAGAAACCTGTGGCAGATGATTTTGCTACTAAAGTGGTTGAATTTGTTGAACGGTCAAAGGAATGGTTATCGGTTGATGCATCAAGTGTAACAGCTGAAAATGTAATGATGGGTGTTTCAGAAGAGGAATTGTACAATATTCCGACTGCTGAATATGTTCATAGACGTGGAGGATTTTTGAACAAACAGTTGACTATTTATCATGTTGCTTTAAATGCTTGTGCAAATCTCAAGAATGTGGAGGTTATGGAGACCATAATGGATATGTTAAAGAAGGATGGAAAAACTCCCGATGTCTACATAATAATGCAAGTCATGAGGTGCTATCTACATTCTGGAGATATTGATCGTGGTCATAAAGCTTTTGAGGAGCACTTAAATTCTGGGGGTTCTGTAGCAGCTGAACTCTATTCAACGCTTGTGGAAGGAGCCATGATTGGTTATACACCAAAGGGAATGCAATTGGCTCAAGAAACACTGGAAAACATGAATTCCAGGGGCTTTTTCTTGAACGCCAGATTAGGAAGTGAGCTCCTCCTTGCAGCAGCGGGTGAAAAGACTGGTGGTTATACAACTGCCAATTATATATGGGACCTCTTGCAAGCTCGACAGATAACTCCTTCATTCGCTGCTGTGGACGCTTATTACAGGGGATTGAAGGATCGTGAGATTCCAGAAGATGACGCTAGGCTTTTATTAGTTTCTCGAATCCACGAAAATCTTCGAGCCAGATTTGGTGGCGACCGAGCATAATCTAAATCAGATTTGGTGTCTCCACATTGAGAATAATTTATGCTCCAATTTTAATTGATTCTTCCATCAGTTGAAGGTATGCATTATGATGTGTATCCAACGGTCTATAGGTGTTTAAGCCTTTAGAATTATGTATTTTGAATAGTGAAAGTGGAGATTTGATAGCAAGTTTTGAGTACTTATTTTGGCCTAGATTTAATTTTAATTTTAGTATTACTTTCAAAGAATTACAAGTTTGGATTCCAGTTTCTTTCTTTTGTGTATATTATTATACATAGTGGTTTAAGTTTCATTATTATCCCCCCAACTGTTTTTGGTAAGGTCTAT

Coding sequence (CDS)

ATGAAGCTCCTTCAATCTGTCGCCGGTCAAAGCCGCTCGCTTGTCCGTTTTCTTGGACAGCGTCGATCTTTTGCTGTTTCTACGGAAGAGTACAGAAAACGGAATTACGCTGATAATGTTTCCGAGTACAAAACCGTTATTGCCTCCCTCACTTCCCAGAGAAGGTACTTCTCATTGAGGGATGTGTATGACGATATGATGTTGGATGGAGTGCAGCCTACAATGGACGTTTTCCACTTACTGATAACTGGAACCATGAAAGGCGCTCGTTTCCAACATGCTTTTTTCTTCAGGGATGAAATGAAGGCCATGGGTTTGATTCCTGATGTTAGTCTGTATAACATGCTGATCTCATTATGTGGTAAATGTAACAACTCTGAAGAGGCTGTCCGGATCTTAGATGAGATGAGGAGATATGAAGTGAAGCCAAATTCACAGACGTACATCTGTCTACTTAATGCTTGTGCAGCTGCTGGTAGATTAGATCGCGTGTATACGATTGTCAGAGATATGACTTCTGCTGGCCTTGGCTTAAACAAGTTCTGCTATGCTGGACTTATAGCTGCACATATGAACAAGAAACCTGTGGCAGATGATTTTGCTACTAAAGTGGTTGAATTTGTTGAACGGTCAAAGGAATGGTTATCGGTTGATGCATCAAGTGTAACAGCTGAAAATGTAATGATGGGTGTTTCAGAAGAGGAATTGTACAATATTCCGACTGCTGAATATGTTCATAGACGTGGAGGATTTTTGAACAAACAGTTGACTATTTATCATGTTGCTTTAAATGCTTGTGCAAATCTCAAGAATGTGGAGGTTATGGAGACCATAATGGATATGTTAAAGAAGGATGGAAAAACTCCCGATGTCTACATAATAATGCAAGTCATGAGGTGCTATCTACATTCTGGAGATATTGATCGTGGTCATAAAGCTTTTGAGGAGCACTTAAATTCTGGGGGTTCTGTAGCAGCTGAACTCTATTCAACGCTTGTGGAAGGAGCCATGATTGGTTATACACCAAAGGGAATGCAATTGGCTCAAGAAACACTGGAAAACATGAATTCCAGGGGCTTTTTCTTGAACGCCAGATTAGGAAGTGAGCTCCTCCTTGCAGCAGCGGGTGAAAAGACTGGTGGTTATACAACTGCCAATTATATATGGGACCTCTTGCAAGCTCGACAGATAACTCCTTCATTCGCTGCTGTGGACGCTTATTACAGGGGATTGAAGGATCGTGAGATTCCAGAAGATGACGCTAGGCTTTTATTAGTTTCTCGAATCCACGAAAATCTTCGAGCCAGATTTGGTGGCGACCGAGCATAA

Protein sequence

MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLRDVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRCYLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGFFLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDDARLLLVSRIHENLRARFGGDRA

Homology

[Close]

BLAST of Cmc04g0110091 vs. NCBI nr
Match: XP_008464942.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g35850, mitochondrial [Cucumis melo] >KAA0057227.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18735.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 878.6 bits (2269), Expect = 2.2e-251
Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 0


Query: 1   MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLR 60
           MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLR
Sbjct: 1   MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLR 60

Query: 61  DVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC 120
           DVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC
Sbjct: 61  DVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC 120

Query: 121 GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK 180
           GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK
Sbjct: 121 GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK 180

Query: 181 FCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIP 240
           FCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIP
Sbjct: 181 FCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIP 240

Query: 241 TAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRC 300
           TAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRC
Sbjct: 241 TAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRC 300

Query: 301 YLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGF 360
           YLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGF
Sbjct: 301 YLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGF 360

Query: 361 FLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDD 420
           FLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDD
Sbjct: 361 FLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDD 420

Query: 421 ARLLLVSRIHENLRARFGGDRA 443
           ARLLLVSRIHENLRARFGGDRA
Sbjct: 421 ARLLLVSRIHENLRARFGGDRA 442

[Close]

BLAST of Cmc04g0110091 vs. NCBI nr
Match: XP_004141120.1 (pentatricopeptide repeat-containing protein At4g35850, mitochondrial [Cucumis sativus])

HSP 1 Score: 840.1 bits (2169), Expect = 8.7e-240
Identity = 418/442 (94.57%), Postives = 432/442 (97.74%), Query Frame = 0


Query: 1   MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLR 60
           MKLLQS+AGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNV+EYKTVIASLT+QRRYFSL 
Sbjct: 1   MKLLQSLAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVAEYKTVIASLTAQRRYFSLT 60

Query: 61  DVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC 120
           DVYDDMMLDGVQPTMDVFHLLI+GTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC
Sbjct: 61  DVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC 120

Query: 121 GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK 180
           GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK
Sbjct: 121 GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK 180

Query: 181 FCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIP 240
           FCYAGLIAAHMNKKPVADDF TKVVEFVERSKEWLSVDASSVTAEN MMGVSEEELYNIP
Sbjct: 181 FCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEELYNIP 240

Query: 241 TAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRC 300
           TAEYVHRRGGFLNKQLTIYHVALNACANLKNV+VMETIMDMLKKDGKTPDVY+IMQVMRC
Sbjct: 241 TAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIMQVMRC 300

Query: 301 YLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGF 360
           YLHSGDIDRGHKAFEEHLNSGGS+A ELY+TLVEGAMIGYTPKGMQLAQETLENMNSRGF
Sbjct: 301 YLHSGDIDRGHKAFEEHLNSGGSIAPELYTTLVEGAMIGYTPKGMQLAQETLENMNSRGF 360

Query: 361 FLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDD 420
           FLN R GSELLLAAAGEKTGGYTTANYIWDLL+AR+ITP F AVDAYY+GLK REIPEDD
Sbjct: 361 FLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKREIPEDD 420

Query: 421 ARLLLVSRIHENLRARFGGDRA 443
            RL+LV+RIHENL+ARFGGDRA
Sbjct: 421 PRLVLVTRIHENLQARFGGDRA 442

[Close]

BLAST of Cmc04g0110091 vs. NCBI nr
Match: XP_022928173.1 (pentatricopeptide repeat-containing protein At4g35850, mitochondrial [Cucurbita moschata])

HSP 1 Score: 792.3 bits (2045), Expect = 2.1e-225
Identity = 395/439 (89.98%), Postives = 414/439 (94.31%), Query Frame = 0


Query: 1   MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLR 60
           MKLLQSV   SRSLVR LGQRRSFAVSTEEY KRNYADNVSEY TVI S+T+QRRYF LR
Sbjct: 1   MKLLQSVTSHSRSLVRLLGQRRSFAVSTEEYSKRNYADNVSEYNTVIGSITAQRRYFLLR 60

Query: 61  DVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC 120
           DVYDDMMLDGVQPTMDVFH LITG+MKGARFQ AFFFRDEMKAMGLIPDV+LYNMLISLC
Sbjct: 61  DVYDDMMLDGVQPTMDVFHSLITGSMKGARFQDAFFFRDEMKAMGLIPDVTLYNMLISLC 120

Query: 121 GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK 180
           GKCNNSEEAVRILDEMRRYEVKP+SQTYICLLNACA AGRLDRVYTIVRDMT+AGLGLNK
Sbjct: 121 GKCNNSEEAVRILDEMRRYEVKPHSQTYICLLNACAVAGRLDRVYTIVRDMTAAGLGLNK 180

Query: 181 FCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIP 240
           FCY GLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASS TAENVMMGVSEEELYNIP
Sbjct: 181 FCYTGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSATAENVMMGVSEEELYNIP 240

Query: 241 TAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRC 300
           TAEYVHRRGGFLN+QLTIYHVAL+ACANLKNVEVMETIMDMLKKDGKTPDV+I++QVMRC
Sbjct: 241 TAEYVHRRGGFLNRQLTIYHVALHACANLKNVEVMETIMDMLKKDGKTPDVFIVIQVMRC 300

Query: 301 YLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGF 360
           YLHSGDIDRG KAFEEHLNSGG  AAELY+TLVEGAMIGYTPKGMQLAQETL NMNSRGF
Sbjct: 301 YLHSGDIDRGLKAFEEHLNSGGLPAAELYATLVEGAMIGYTPKGMQLAQETLVNMNSRGF 360

Query: 361 FLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDD 420
           FLN +LGS+LLLAAAGEKTGGYTTANYIWDLLQAR+ITPSF AV+AYY GLK+REIPE+D
Sbjct: 361 FLNPKLGSDLLLAAAGEKTGGYTTANYIWDLLQARKITPSFPAVEAYYNGLKEREIPEED 420

Query: 421 ARLLLVSRIHENLRARFGG 440
            RLLLVSR + NLR R GG
Sbjct: 421 PRLLLVSRTYSNLRVRSGG 439

[Close]

BLAST of Cmc04g0110091 vs. NCBI nr
Match: XP_022989560.1 (pentatricopeptide repeat-containing protein At4g35850, mitochondrial [Cucurbita maxima])

HSP 1 Score: 792.3 bits (2045), Expect = 2.1e-225
Identity = 395/439 (89.98%), Postives = 414/439 (94.31%), Query Frame = 0


Query: 1   MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLR 60
           MKLLQSV G SRSLVR LGQRRSFAVSTEEY KRNYADNVSEY TVI S+T+QRRYF LR
Sbjct: 1   MKLLQSVTGHSRSLVRLLGQRRSFAVSTEEYSKRNYADNVSEYNTVIGSITAQRRYFLLR 60

Query: 61  DVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC 120
           DVYDD+MLDGVQPTMDVFH LITG+MKGARFQ AFFFRDEMKAMGLIPDV+LYNMLISLC
Sbjct: 61  DVYDDLMLDGVQPTMDVFHSLITGSMKGARFQDAFFFRDEMKAMGLIPDVTLYNMLISLC 120

Query: 121 GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK 180
           GKCNNSEEAVRILDEMRRYEVKP+SQTYICLLNACA AGRLDRVYTIVRDMT+AGLGLNK
Sbjct: 121 GKCNNSEEAVRILDEMRRYEVKPHSQTYICLLNACAVAGRLDRVYTIVRDMTAAGLGLNK 180

Query: 181 FCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIP 240
           FCY GLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASS TAENVMMGVSEEELYNIP
Sbjct: 181 FCYTGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSATAENVMMGVSEEELYNIP 240

Query: 241 TAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRC 300
           TAEYVHRRGGFLN+QLTIYHVAL+ACANLKNVEVMETIMDMLKKDGKTPDV+I++QVMRC
Sbjct: 241 TAEYVHRRGGFLNRQLTIYHVALHACANLKNVEVMETIMDMLKKDGKTPDVFIVIQVMRC 300

Query: 301 YLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGF 360
           YLHSGDIDRG KAFEEHLNSGG  AAELY+TLVEGAMIGYTPKGMQLAQETL NMNSRGF
Sbjct: 301 YLHSGDIDRGLKAFEEHLNSGGPPAAELYATLVEGAMIGYTPKGMQLAQETLVNMNSRGF 360

Query: 361 FLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDD 420
           FLN +LGS+LLLAAAGEKTGGYTTANYIWDLLQAR+ITPS  AV+AYY GLK+REIPEDD
Sbjct: 361 FLNPKLGSDLLLAAAGEKTGGYTTANYIWDLLQARKITPSSPAVEAYYNGLKEREIPEDD 420

Query: 421 ARLLLVSRIHENLRARFGG 440
            RLLLVSR + NLR R GG
Sbjct: 421 PRLLLVSRTYNNLRVRSGG 439

[Close]

BLAST of Cmc04g0110091 vs. NCBI nr
Match: KAG6588934.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 792.3 bits (2045), Expect = 2.1e-225
Identity = 395/439 (89.98%), Postives = 414/439 (94.31%), Query Frame = 0


Query: 1   MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLR 60
           MKLLQSV   SRSLVR LGQRRSFAVSTEEY KRNYADNVSEY TVI S+T+QRRYF LR
Sbjct: 1   MKLLQSVTSHSRSLVRLLGQRRSFAVSTEEYSKRNYADNVSEYNTVIGSITAQRRYFLLR 60

Query: 61  DVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC 120
           DVYDDMMLDGVQPTMDVFH LITG+MKGARFQ AFFFRDEMKAMGLIPDV+LYNMLISLC
Sbjct: 61  DVYDDMMLDGVQPTMDVFHSLITGSMKGARFQDAFFFRDEMKAMGLIPDVTLYNMLISLC 120

Query: 121 GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK 180
           GKCNNSEEAVRILDEMRRYEVKP+SQTYICLLNACA AGRLDRVYTIVRDMT+AGLGLNK
Sbjct: 121 GKCNNSEEAVRILDEMRRYEVKPHSQTYICLLNACAVAGRLDRVYTIVRDMTAAGLGLNK 180

Query: 181 FCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIP 240
           FCY GLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASS TAENVMMGVSEEELYNIP
Sbjct: 181 FCYTGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSATAENVMMGVSEEELYNIP 240

Query: 241 TAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRC 300
           TAEYVHRRGGFLN+QLTIYHVAL+ACANLKNVEVMETIMDMLKKDGKTPDV+I++QVMRC
Sbjct: 241 TAEYVHRRGGFLNRQLTIYHVALHACANLKNVEVMETIMDMLKKDGKTPDVFIVIQVMRC 300

Query: 301 YLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGF 360
           YLHSGDIDRG KAFEEHLNSGG  AAELY+TLVEGAMIGYTPKGMQLAQETL NMNSRGF
Sbjct: 301 YLHSGDIDRGLKAFEEHLNSGGLPAAELYTTLVEGAMIGYTPKGMQLAQETLVNMNSRGF 360

Query: 361 FLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDD 420
           FLN +LGS+LLLAAAGEKTGGYTTANYIWDLLQAR+ITPSF AV+AYY GLK+REIPE+D
Sbjct: 361 FLNPKLGSDLLLAAAGEKTGGYTTANYIWDLLQARKITPSFPAVEAYYNGLKEREIPEED 420

Query: 421 ARLLLVSRIHENLRARFGG 440
            RLLLVSR + NLR R GG
Sbjct: 421 PRLLLVSRTYSNLRVRSGG 439

[Close]

BLAST of Cmc04g0110091 vs. ExPASy Swiss-Prot
Match: Q8VYR5 (Pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g35850 PE=1 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 2.6e-162
Identity = 272/436 (62.39%), Postives = 349/436 (80.05%), Query Frame = 0


Query: 3   LLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLRDV 62
           L+QS++G++RSLVR L  RR FA S EE  KRNYA+++SEY T + S+T+QRR++ LRDV
Sbjct: 4   LMQSISGRNRSLVRALVSRRYFASSPEEIAKRNYANDLSEYNTAVNSVTAQRRHYLLRDV 63

Query: 63  YDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGK 122
           YDDM LDGVQPT D+FH  + GTMKGAR   AFFFR+EMKAMG+ PDV+LYN LIS CGK
Sbjct: 64  YDDMKLDGVQPTADIFHSFVVGTMKGARLSDAFFFREEMKAMGIAPDVNLYNFLISTCGK 123

Query: 123 CNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFC 182
           C N +EA+R+ DEM+RY+VKPN QT++CLLNACA +G+LD VY IVRDMT+AG+GLN+FC
Sbjct: 124 CKNGKEAIRVYDEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFC 183

Query: 183 YAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIPTA 242
           YAGLI AH+NK+P  D+ +TK++EFVE+SK W ++D+S  +AE+VM  +SEEELYNIPTA
Sbjct: 184 YAGLITAHLNKQPRPDNLSTKILEFVEQSKGWSAIDSSRKSAEDVMFSISEEELYNIPTA 243

Query: 243 EYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRCYL 302
           +Y HR   FL + LT+YHVA +A A+LK+V+  E +++MLKKDGK  D Y ++Q+MRCYL
Sbjct: 244 DYSHRT-RFLQRNLTVYHVAFSALADLKDVKATEALLEMLKKDGKDTDTYCMLQIMRCYL 303

Query: 303 HSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGFFL 362
           HS D + G K F++++++    A ELY+TL+EGAM GYT  GM++AQ+TL  MN R FFL
Sbjct: 304 HSQDFENGLKLFQDYMSADKIPAMELYTTLIEGAMTGYTDNGMKIAQDTLIQMNERNFFL 363

Query: 363 NARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDDAR 422
           + R GS LLL AAGEKTGGYT AN IWDL+ AR I P+ AAV+AYY+GLK+REIPEDD R
Sbjct: 364 DPRTGSNLLLKAAGEKTGGYTVANMIWDLMLARNILPTLAAVEAYYKGLKEREIPEDDPR 423

Query: 423 LLLVSRIHENLRARFG 439
           L+LV+R + NLR R G
Sbjct: 424 LMLVTRTYNNLRLREG 438

[Close]

BLAST of Cmc04g0110091 vs. ExPASy Swiss-Prot
Match: Q9FIT7 (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61990 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.8e-21
Identity = 79/308 (25.65%), Postives = 139/308 (45.13%), Query Frame = 0


Query: 30  EYRKRNYADNVSEYKTVIASLTSQRRYFSLRDVYDDMMLDGVQPTMDVFHLLITGTMKGA 89
           E +KRN   +   Y TV+  + S        ++  +M+  G +P + ++  LI   ++ +
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 90  RFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYI 149
           RF  A     EMK  G+ PD+  YN LI    K    +EA   L EM    +KPN+ TY 
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526

Query: 150 CLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFCYAGLIAAHMNKKPVADDFATKVVEFVE 209
             ++    A         V++M   G+  NK    GLI  +  K  V +  +     +  
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA----YRS 586

Query: 210 RSKEWLSVDASSVTAENVMMGVSEEELYNIPTAEYVHR--RGGFLNKQLTIYHVALNACA 269
              + +  DA + T   +M G+ + +   +  AE + R  RG  +   +  Y V +N  +
Sbjct: 587 MVDQGILGDAKTYTV--LMNGLFKND--KVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 646

Query: 270 NLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRCYLHSGDIDRGHKAFEEHLNSGGSVAAE 329
            L N++   +I D + ++G TP+V I   ++  +  SG+I++  +  +E    G    A 
Sbjct: 647 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 706

Query: 330 LYSTLVEG 336
            Y T+++G
Sbjct: 707 TYCTIIDG 706

[Close]

BLAST of Cmc04g0110091 vs. ExPASy Swiss-Prot
Match: Q940A6 (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g19440 PE=2 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 1.6e-15
Identity = 75/313 (23.96%), Postives = 125/313 (39.94%), Query Frame = 0


Query: 23  SFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLRDVYDDMMLDGVQPTMDVFHLLI 82
           +F +  E   +    D VS Y T+I+    +++        D+M+  G++P    + +LI
Sbjct: 537 AFRIQKEILGRGCVMDRVS-YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 596

Query: 83  TGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNNSEEAVRILDEMRRYEVK 142
            G     + + A  F D+ K  G++PDV  Y+++I  C K   +EE     DEM    V+
Sbjct: 597 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 656

Query: 143 PNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFCYAGLIAAHMNKKPVADDFAT 202
           PN+  Y  L+ A   +GRL     +  DM   G+  N   Y  LI        +      
Sbjct: 657 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG----MSIISRVEE 716

Query: 203 KVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIPTAEYVHRRGGFLNKQLTIYHVA 262
             + F E   E L  +    TA     G   + +        +H +    NK    Y V 
Sbjct: 717 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK--ITYTVM 776

Query: 263 LNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRCYLHSGDIDRGHKAFEEHLNSGG 322
           +   A   NV     +++ +++ G  PD     + +  YL  G +    K  +E      
Sbjct: 777 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE------ 832

Query: 323 SVAAELYSTLVEG 336
               E Y+ ++EG
Sbjct: 837 ----ENYAAIIEG 832

[Close]

BLAST of Cmc04g0110091 vs. ExPASy Swiss-Prot
Match: B8Y6I0 (Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=4577 GN=PPR10 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.1e-14
Identity = 82/376 (21.81%), Postives = 163/376 (43.35%), Query Frame = 0


Query: 29  EEYRKRNYADNVSEYKTVIASLTSQRRYFSLRDVYDDMMLDGVQPTMDVFHLLITGTMKG 88
           E+ + R +A  V  Y  ++        Y     V  +M  +G QP    ++ L     + 
Sbjct: 269 EDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARA 328

Query: 89  ARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNNSEEAVRILDEMRRYEVKPNSQTY 148
             F+ A    D M + GL+P+   YN +++  G     +EA+ + D+M++    PN  TY
Sbjct: 329 GFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTY 388

Query: 149 ICLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFCYAGLIAAHMNKKPVADDFATKVVEFV 208
             +L       R   +  ++ +M+ +G   N+  +  ++A  +  K   +D+ T+V+E +
Sbjct: 389 NLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLA--VCGKRGMEDYVTRVLEGM 448

Query: 209 ERSKEWLSVDA-SSVTAENVMMG--VSEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNA 268
                 LS D  +++ A     G   +  ++YN  T+       GF    +T Y+  LN 
Sbjct: 449 RSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTS------AGF-TPCITTYNALLNV 508

Query: 269 CANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRCYLHSGDIDRGHKAFEEHLNSGGSVA 328
            +   +    ++I+  ++  G  P+      +++CY   G++  G  A E  +   G+V 
Sbjct: 509 LSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNV-AGIAAIENEVYGSGAVF 568

Query: 329 AE--LYSTLVEGAMIGYTPKGMQLAQETLENMNSRGFFLNARLGSELLLAAAGEKTGGYT 388
               +  TLV          GM+ A    + + +RG+  +  + + +L   A  K G Y+
Sbjct: 569 PSWVILRTLVIANFKCRRLDGMETA---FQEVKARGYNPDLVIFNSMLSIYA--KNGMYS 628

Query: 389 TANYIWDLLQARQITP 400
            A  ++D ++   ++P
Sbjct: 629 KATEVFDSIKRSGLSP 629

[Close]

BLAST of Cmc04g0110091 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 6.9e-14
Identity = 88/404 (21.78%), Postives = 150/404 (37.13%), Query Frame = 0


Query: 69  DGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNNSEE 128
           DG  P    F+ L+ G  K    +HA    D M   G  PDV  YN +IS   K    +E
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348

Query: 129 AVRILDEMRRYEVKPNSQTY------ICLLNACAAAGRLDRVYT---------------- 188
           AV +LD+M   +  PN+ TY      +C  N    A  L RV T                
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408

Query: 189 -------------IVRDMTSAGLGLNKFCYAGLIAAHMNKKPVADDFATKVVEFVERSKE 248
                        +  +M S G   ++F Y  LI +  +K  +  D A  +++ +E S  
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL--DEALNMLKQMELSGC 468

Query: 249 WLSVDASSVTAENVMMGVSEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVE 308
             SV   +   +         E   I     VH     +++    Y+  ++     + VE
Sbjct: 469 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG----VSRNSVTYNTLIDGLCKSRRVE 528

Query: 309 VMETIMDMLKKDGKTPDVYIIMQVMRCYLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLV 368
               +MD +  +G+ PD Y    ++  +   GDI +     +   ++G       Y TL+
Sbjct: 529 DAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 588

Query: 369 EGAMIGYTPKGMQLAQETLENMNSRGFFLNARLGSELLLAAAGEKTGGYTTANYIWDLLQ 428
            G         +++A + L ++  +G  L     +  ++     K       N   ++L+
Sbjct: 589 SGLC---KAGRVEVASKLLRSIQMKGINLTPHAYNP-VIQGLFRKRKTTEAINLFREMLE 648

Query: 429 ARQITPSFAAVDAYYRGLKDREIPEDDARLLLVSRIHENLRARF 438
             +  P   +    +RGL +   P  +A   LV  + +     F
Sbjct: 649 QNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEF 682

[Close]

BLAST of Cmc04g0110091 vs. ExPASy TrEMBL
Match: A0A5D3D5B2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00370 PE=4 SV=1)

HSP 1 Score: 878.6 bits (2269), Expect = 1.1e-251
Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 0


Query: 1   MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLR 60
           MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLR
Sbjct: 1   MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLR 60

Query: 61  DVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC 120
           DVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC
Sbjct: 61  DVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC 120

Query: 121 GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK 180
           GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK
Sbjct: 121 GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK 180

Query: 181 FCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIP 240
           FCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIP
Sbjct: 181 FCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIP 240

Query: 241 TAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRC 300
           TAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRC
Sbjct: 241 TAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRC 300

Query: 301 YLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGF 360
           YLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGF
Sbjct: 301 YLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGF 360

Query: 361 FLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDD 420
           FLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDD
Sbjct: 361 FLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDD 420

Query: 421 ARLLLVSRIHENLRARFGGDRA 443
           ARLLLVSRIHENLRARFGGDRA
Sbjct: 421 ARLLLVSRIHENLRARFGGDRA 442

[Close]

BLAST of Cmc04g0110091 vs. ExPASy TrEMBL
Match: A0A1S3CMS3 (pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502690 PE=4 SV=1)

HSP 1 Score: 878.6 bits (2269), Expect = 1.1e-251
Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 0


Query: 1   MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLR 60
           MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLR
Sbjct: 1   MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLR 60

Query: 61  DVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC 120
           DVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC
Sbjct: 61  DVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC 120

Query: 121 GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK 180
           GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK
Sbjct: 121 GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK 180

Query: 181 FCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIP 240
           FCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIP
Sbjct: 181 FCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIP 240

Query: 241 TAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRC 300
           TAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRC
Sbjct: 241 TAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRC 300

Query: 301 YLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGF 360
           YLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGF
Sbjct: 301 YLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGF 360

Query: 361 FLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDD 420
           FLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDD
Sbjct: 361 FLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDD 420

Query: 421 ARLLLVSRIHENLRARFGGDRA 443
           ARLLLVSRIHENLRARFGGDRA
Sbjct: 421 ARLLLVSRIHENLRARFGGDRA 442

[Close]

BLAST of Cmc04g0110091 vs. ExPASy TrEMBL
Match: A0A0A0LCH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G840460 PE=4 SV=1)

HSP 1 Score: 840.1 bits (2169), Expect = 4.2e-240
Identity = 418/442 (94.57%), Postives = 432/442 (97.74%), Query Frame = 0


Query: 1   MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLR 60
           MKLLQS+AGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNV+EYKTVIASLT+QRRYFSL 
Sbjct: 1   MKLLQSLAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVAEYKTVIASLTAQRRYFSLT 60

Query: 61  DVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC 120
           DVYDDMMLDGVQPTMDVFHLLI+GTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC
Sbjct: 61  DVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC 120

Query: 121 GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK 180
           GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK
Sbjct: 121 GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK 180

Query: 181 FCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIP 240
           FCYAGLIAAHMNKKPVADDF TKVVEFVERSKEWLSVDASSVTAEN MMGVSEEELYNIP
Sbjct: 181 FCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEELYNIP 240

Query: 241 TAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRC 300
           TAEYVHRRGGFLNKQLTIYHVALNACANLKNV+VMETIMDMLKKDGKTPDVY+IMQVMRC
Sbjct: 241 TAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIMQVMRC 300

Query: 301 YLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGF 360
           YLHSGDIDRGHKAFEEHLNSGGS+A ELY+TLVEGAMIGYTPKGMQLAQETLENMNSRGF
Sbjct: 301 YLHSGDIDRGHKAFEEHLNSGGSIAPELYTTLVEGAMIGYTPKGMQLAQETLENMNSRGF 360

Query: 361 FLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDD 420
           FLN R GSELLLAAAGEKTGGYTTANYIWDLL+AR+ITP F AVDAYY+GLK REIPEDD
Sbjct: 361 FLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKREIPEDD 420

Query: 421 ARLLLVSRIHENLRARFGGDRA 443
            RL+LV+RIHENL+ARFGGDRA
Sbjct: 421 PRLVLVTRIHENLQARFGGDRA 442

[Close]

BLAST of Cmc04g0110091 vs. ExPASy TrEMBL
Match: A0A6J1JMQ0 (pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111486622 PE=4 SV=1)

HSP 1 Score: 792.3 bits (2045), Expect = 1.0e-225
Identity = 395/439 (89.98%), Postives = 414/439 (94.31%), Query Frame = 0


Query: 1   MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLR 60
           MKLLQSV G SRSLVR LGQRRSFAVSTEEY KRNYADNVSEY TVI S+T+QRRYF LR
Sbjct: 1   MKLLQSVTGHSRSLVRLLGQRRSFAVSTEEYSKRNYADNVSEYNTVIGSITAQRRYFLLR 60

Query: 61  DVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC 120
           DVYDD+MLDGVQPTMDVFH LITG+MKGARFQ AFFFRDEMKAMGLIPDV+LYNMLISLC
Sbjct: 61  DVYDDLMLDGVQPTMDVFHSLITGSMKGARFQDAFFFRDEMKAMGLIPDVTLYNMLISLC 120

Query: 121 GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK 180
           GKCNNSEEAVRILDEMRRYEVKP+SQTYICLLNACA AGRLDRVYTIVRDMT+AGLGLNK
Sbjct: 121 GKCNNSEEAVRILDEMRRYEVKPHSQTYICLLNACAVAGRLDRVYTIVRDMTAAGLGLNK 180

Query: 181 FCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIP 240
           FCY GLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASS TAENVMMGVSEEELYNIP
Sbjct: 181 FCYTGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSATAENVMMGVSEEELYNIP 240

Query: 241 TAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRC 300
           TAEYVHRRGGFLN+QLTIYHVAL+ACANLKNVEVMETIMDMLKKDGKTPDV+I++QVMRC
Sbjct: 241 TAEYVHRRGGFLNRQLTIYHVALHACANLKNVEVMETIMDMLKKDGKTPDVFIVIQVMRC 300

Query: 301 YLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGF 360
           YLHSGDIDRG KAFEEHLNSGG  AAELY+TLVEGAMIGYTPKGMQLAQETL NMNSRGF
Sbjct: 301 YLHSGDIDRGLKAFEEHLNSGGPPAAELYATLVEGAMIGYTPKGMQLAQETLVNMNSRGF 360

Query: 361 FLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDD 420
           FLN +LGS+LLLAAAGEKTGGYTTANYIWDLLQAR+ITPS  AV+AYY GLK+REIPEDD
Sbjct: 361 FLNPKLGSDLLLAAAGEKTGGYTTANYIWDLLQARKITPSSPAVEAYYNGLKEREIPEDD 420

Query: 421 ARLLLVSRIHENLRARFGG 440
            RLLLVSR + NLR R GG
Sbjct: 421 PRLLLVSRTYNNLRVRSGG 439

[Close]

BLAST of Cmc04g0110091 vs. ExPASy TrEMBL
Match: A0A6J1EN55 (pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111435075 PE=4 SV=1)

HSP 1 Score: 792.3 bits (2045), Expect = 1.0e-225
Identity = 395/439 (89.98%), Postives = 414/439 (94.31%), Query Frame = 0


Query: 1   MKLLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLR 60
           MKLLQSV   SRSLVR LGQRRSFAVSTEEY KRNYADNVSEY TVI S+T+QRRYF LR
Sbjct: 1   MKLLQSVTSHSRSLVRLLGQRRSFAVSTEEYSKRNYADNVSEYNTVIGSITAQRRYFLLR 60

Query: 61  DVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLC 120
           DVYDDMMLDGVQPTMDVFH LITG+MKGARFQ AFFFRDEMKAMGLIPDV+LYNMLISLC
Sbjct: 61  DVYDDMMLDGVQPTMDVFHSLITGSMKGARFQDAFFFRDEMKAMGLIPDVTLYNMLISLC 120

Query: 121 GKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNK 180
           GKCNNSEEAVRILDEMRRYEVKP+SQTYICLLNACA AGRLDRVYTIVRDMT+AGLGLNK
Sbjct: 121 GKCNNSEEAVRILDEMRRYEVKPHSQTYICLLNACAVAGRLDRVYTIVRDMTAAGLGLNK 180

Query: 181 FCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIP 240
           FCY GLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASS TAENVMMGVSEEELYNIP
Sbjct: 181 FCYTGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSATAENVMMGVSEEELYNIP 240

Query: 241 TAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRC 300
           TAEYVHRRGGFLN+QLTIYHVAL+ACANLKNVEVMETIMDMLKKDGKTPDV+I++QVMRC
Sbjct: 241 TAEYVHRRGGFLNRQLTIYHVALHACANLKNVEVMETIMDMLKKDGKTPDVFIVIQVMRC 300

Query: 301 YLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGF 360
           YLHSGDIDRG KAFEEHLNSGG  AAELY+TLVEGAMIGYTPKGMQLAQETL NMNSRGF
Sbjct: 301 YLHSGDIDRGLKAFEEHLNSGGLPAAELYATLVEGAMIGYTPKGMQLAQETLVNMNSRGF 360

Query: 361 FLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDD 420
           FLN +LGS+LLLAAAGEKTGGYTTANYIWDLLQAR+ITPSF AV+AYY GLK+REIPE+D
Sbjct: 361 FLNPKLGSDLLLAAAGEKTGGYTTANYIWDLLQARKITPSFPAVEAYYNGLKEREIPEED 420

Query: 421 ARLLLVSRIHENLRARFGG 440
            RLLLVSR + NLR R GG
Sbjct: 421 PRLLLVSRTYSNLRVRSGG 439

[Close]

BLAST of Cmc04g0110091 vs. TAIR 10
Match: AT4G35850.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 573.2 bits (1476), Expect = 1.8e-163
Identity = 272/436 (62.39%), Postives = 349/436 (80.05%), Query Frame = 0


Query: 3   LLQSVAGQSRSLVRFLGQRRSFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLRDV 62
           L+QS++G++RSLVR L  RR FA S EE  KRNYA+++SEY T + S+T+QRR++ LRDV
Sbjct: 4   LMQSISGRNRSLVRALVSRRYFASSPEEIAKRNYANDLSEYNTAVNSVTAQRRHYLLRDV 63

Query: 63  YDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGK 122
           YDDM LDGVQPT D+FH  + GTMKGAR   AFFFR+EMKAMG+ PDV+LYN LIS CGK
Sbjct: 64  YDDMKLDGVQPTADIFHSFVVGTMKGARLSDAFFFREEMKAMGIAPDVNLYNFLISTCGK 123

Query: 123 CNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFC 182
           C N +EA+R+ DEM+RY+VKPN QT++CLLNACA +G+LD VY IVRDMT+AG+GLN+FC
Sbjct: 124 CKNGKEAIRVYDEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFC 183

Query: 183 YAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIPTA 242
           YAGLI AH+NK+P  D+ +TK++EFVE+SK W ++D+S  +AE+VM  +SEEELYNIPTA
Sbjct: 184 YAGLITAHLNKQPRPDNLSTKILEFVEQSKGWSAIDSSRKSAEDVMFSISEEELYNIPTA 243

Query: 243 EYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRCYL 302
           +Y HR   FL + LT+YHVA +A A+LK+V+  E +++MLKKDGK  D Y ++Q+MRCYL
Sbjct: 244 DYSHRT-RFLQRNLTVYHVAFSALADLKDVKATEALLEMLKKDGKDTDTYCMLQIMRCYL 303

Query: 303 HSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQETLENMNSRGFFL 362
           HS D + G K F++++++    A ELY+TL+EGAM GYT  GM++AQ+TL  MN R FFL
Sbjct: 304 HSQDFENGLKLFQDYMSADKIPAMELYTTLIEGAMTGYTDNGMKIAQDTLIQMNERNFFL 363

Query: 363 NARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGLKDREIPEDDAR 422
           + R GS LLL AAGEKTGGYT AN IWDL+ AR I P+ AAV+AYY+GLK+REIPEDD R
Sbjct: 364 DPRTGSNLLLKAAGEKTGGYTVANMIWDLMLARNILPTLAAVEAYYKGLKEREIPEDDPR 423

Query: 423 LLLVSRIHENLRARFG 439
           L+LV+R + NLR R G
Sbjct: 424 LMLVTRTYNNLRLREG 438

[Close]

BLAST of Cmc04g0110091 vs. TAIR 10
Match: AT5G61990.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 4.2e-22
Identity = 79/308 (25.65%), Postives = 139/308 (45.13%), Query Frame = 0


Query: 30  EYRKRNYADNVSEYKTVIASLTSQRRYFSLRDVYDDMMLDGVQPTMDVFHLLITGTMKGA 89
           E +KRN   +   Y TV+  + S        ++  +M+  G +P + ++  LI   ++ +
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 90  RFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYI 149
           RF  A     EMK  G+ PD+  YN LI    K    +EA   L EM    +KPN+ TY 
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526

Query: 150 CLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFCYAGLIAAHMNKKPVADDFATKVVEFVE 209
             ++    A         V++M   G+  NK    GLI  +  K  V +  +     +  
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA----YRS 586

Query: 210 RSKEWLSVDASSVTAENVMMGVSEEELYNIPTAEYVHR--RGGFLNKQLTIYHVALNACA 269
              + +  DA + T   +M G+ + +   +  AE + R  RG  +   +  Y V +N  +
Sbjct: 587 MVDQGILGDAKTYTV--LMNGLFKND--KVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 646

Query: 270 NLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRCYLHSGDIDRGHKAFEEHLNSGGSVAAE 329
            L N++   +I D + ++G TP+V I   ++  +  SG+I++  +  +E    G    A 
Sbjct: 647 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 706

Query: 330 LYSTLVEG 336
            Y T+++G
Sbjct: 707 TYCTIIDG 706

[Close]

BLAST of Cmc04g0110091 vs. TAIR 10
Match: AT4G19440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 1.2e-16
Identity = 75/313 (23.96%), Postives = 125/313 (39.94%), Query Frame = 0


Query: 23  SFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLRDVYDDMMLDGVQPTMDVFHLLI 82
           +F +  E   +    D VS Y T+I+    +++        D+M+  G++P    + +LI
Sbjct: 524 AFRIQKEILGRGCVMDRVS-YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 583

Query: 83  TGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNNSEEAVRILDEMRRYEVK 142
            G     + + A  F D+ K  G++PDV  Y+++I  C K   +EE     DEM    V+
Sbjct: 584 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 643

Query: 143 PNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFCYAGLIAAHMNKKPVADDFAT 202
           PN+  Y  L+ A   +GRL     +  DM   G+  N   Y  LI        +      
Sbjct: 644 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG----MSIISRVEE 703

Query: 203 KVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIPTAEYVHRRGGFLNKQLTIYHVA 262
             + F E   E L  +    TA     G   + +        +H +    NK    Y V 
Sbjct: 704 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK--ITYTVM 763

Query: 263 LNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRCYLHSGDIDRGHKAFEEHLNSGG 322
           +   A   NV     +++ +++ G  PD     + +  YL  G +    K  +E      
Sbjct: 764 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE------ 819

Query: 323 SVAAELYSTLVEG 336
               E Y+ ++EG
Sbjct: 824 ----ENYAAIIEG 819

[Close]

BLAST of Cmc04g0110091 vs. TAIR 10
Match: AT4G19440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 1.2e-16
Identity = 75/313 (23.96%), Postives = 125/313 (39.94%), Query Frame = 0


Query: 23  SFAVSTEEYRKRNYADNVSEYKTVIASLTSQRRYFSLRDVYDDMMLDGVQPTMDVFHLLI 82
           +F +  E   +    D VS Y T+I+    +++        D+M+  G++P    + +LI
Sbjct: 524 AFRIQKEILGRGCVMDRVS-YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 583

Query: 83  TGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNNSEEAVRILDEMRRYEVK 142
            G     + + A  F D+ K  G++PDV  Y+++I  C K   +EE     DEM    V+
Sbjct: 584 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 643

Query: 143 PNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFCYAGLIAAHMNKKPVADDFAT 202
           PN+  Y  L+ A   +GRL     +  DM   G+  N   Y  LI        +      
Sbjct: 644 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG----MSIISRVEE 703

Query: 203 KVVEFVERSKEWLSVDASSVTAENVMMGVSEEELYNIPTAEYVHRRGGFLNKQLTIYHVA 262
             + F E   E L  +    TA     G   + +        +H +    NK    Y V 
Sbjct: 704 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK--ITYTVM 763

Query: 263 LNACANLKNVEVMETIMDMLKKDGKTPDVYIIMQVMRCYLHSGDIDRGHKAFEEHLNSGG 322
           +   A   NV     +++ +++ G  PD     + +  YL  G +    K  +E      
Sbjct: 764 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE------ 819

Query: 323 SVAAELYSTLVEG 336
               E Y+ ++EG
Sbjct: 824 ----ENYAAIIEG 819

[Close]

BLAST of Cmc04g0110091 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 4.9e-15
Identity = 88/404 (21.78%), Postives = 150/404 (37.13%), Query Frame = 0


Query: 69  DGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNNSEE 128
           DG  P    F+ L+ G  K    +HA    D M   G  PDV  YN +IS   K    +E
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348

Query: 129 AVRILDEMRRYEVKPNSQTY------ICLLNACAAAGRLDRVYT---------------- 188
           AV +LD+M   +  PN+ TY      +C  N    A  L RV T                
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408

Query: 189 -------------IVRDMTSAGLGLNKFCYAGLIAAHMNKKPVADDFATKVVEFVERSKE 248
                        +  +M S G   ++F Y  LI +  +K  +  D A  +++ +E S  
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL--DEALNMLKQMELSGC 468

Query: 249 WLSVDASSVTAENVMMGVSEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVE 308
             SV   +   +         E   I     VH     +++    Y+  ++     + VE
Sbjct: 469 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG----VSRNSVTYNTLIDGLCKSRRVE 528

Query: 309 VMETIMDMLKKDGKTPDVYIIMQVMRCYLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLV 368
               +MD +  +G+ PD Y    ++  +   GDI +     +   ++G       Y TL+
Sbjct: 529 DAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 588

Query: 369 EGAMIGYTPKGMQLAQETLENMNSRGFFLNARLGSELLLAAAGEKTGGYTTANYIWDLLQ 428
            G         +++A + L ++  +G  L     +  ++     K       N   ++L+
Sbjct: 589 SGLC---KAGRVEVASKLLRSIQMKGINLTPHAYNP-VIQGLFRKRKTTEAINLFREMLE 648

Query: 429 ARQITPSFAAVDAYYRGLKDREIPEDDARLLLVSRIHENLRARF 438
             +  P   +    +RGL +   P  +A   LV  + +     F
Sbjct: 649 QNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEF 682

The following BLAST results are available for this feature:

BLAST of Cmc04g0110091 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464942.1	2.2e-251	100.00	PREDICTED: pentatricopeptide repeat-containing protein At4g35850, mitochondrial ...	[more]
XP_004141120.1	8.7e-240	94.57	pentatricopeptide repeat-containing protein At4g35850, mitochondrial [Cucumis sa...	[more]
XP_022928173.1	2.1e-225	89.98	pentatricopeptide repeat-containing protein At4g35850, mitochondrial [Cucurbita ...	[more]
XP_022989560.1	2.1e-225	89.98	pentatricopeptide repeat-containing protein At4g35850, mitochondrial [Cucurbita ...	[more]
KAG6588934.1	2.1e-225	89.98	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of Cmc04g0110091 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYR5	2.6e-162	62.39	Pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Arabidop...	[more]
Q9FIT7	5.8e-21	25.65	Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidop...	[more]
Q940A6	1.6e-15	23.96	Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidop...	[more]
B8Y6I0	3.1e-14	21.81	Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=457...	[more]
Q9LFF1	6.9e-14	21.78	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]

BLAST of Cmc04g0110091 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D5B2	1.1e-251	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CMS3	1.1e-251	100.00	pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Cucumis ...	[more]
A0A0A0LCH8	4.2e-240	94.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G840460 PE=4 SV=1	[more]
A0A6J1JMQ0	1.0e-225	89.98	pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Cucurbit...	[more]
A0A6J1EN55	1.0e-225	89.98	pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Cucurbit...	[more]

BLAST of Cmc04g0110091 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35850.1	1.8e-163	62.39	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G61990.1	4.2e-22	25.65	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G19440.1	1.2e-16	23.96	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G19440.2	1.2e-16	23.96	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53700.1	4.9e-15	21.78	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 147..178 e-value: 7.6E-4 score: 17.5 coord: 112..144 e-value: 4.4E-8 score: 30.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 108..156 e-value: 3.1E-13 score: 49.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 109..143 score: 12.002681
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 144..178 score: 9.437737
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 242..439 e-value: 5.7E-12 score: 47.6 coord: 29..238 e-value: 1.7E-32 score: 115.1
None	No IPR available	PANTHER	PTHR47801	OS05G0145600 PROTEIN	coord: 6..440

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0110091.1	Cmc04g0110091.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034220	ion transmembrane transport
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0015276	ligand-gated ion channel activity
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0038023	signaling receptor activity