Cmc04g0110071 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0110071
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	rhomboid-like protein 20
Location	CMiso1.1chr04: 29389280 .. 29396598 (+)
RNA-Seq Expression	Cmc04g0110071
Synteny	Cmc04g0110071

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGGGAAGAGGAAGAGATATCGAATTTCCACTCTCAAGTTCCCAACAGACGAAGACGACAAATCGAAATCAAAATCAAATAGAGAAAGAAAGAAGAAGGCTGTGACCGTCTCAGAGAATCGTTCCTTCCTCTCTGAGACGATGAACGGCGGCCCCTCCGGTTTCAGTACGTTCTCTTCCACTCTTCTCTTCGATTCCTTAACCAACCATTTTACTCCTCAATTTCTTCTTTCAACTTTGATCCATTTTCCTCTACCTTTGTGTCCGCAGACAATGCTCCCGTCACCCGGACCTTCATCATCGCCTCCGCTCTTTTCACCATTTTCTTCGGGATCCAAGGCCGTTCAATTAAGCTTGGTTTGTCCTATCAGGTACTTCTCTTCCACTCCCTCTGGTTTGATTTTGGTGTCTCCGATTTTGGGTTTTCTTTCTTTCATTAACGTGACCCCCTTATTGCTTGTTTCGATGTTTGATTATCAGTTCCCTGATATATTGTGCTTGCATCTGTTGACTGGCAGCTACTTTTTCAATCCTTCGATTATAGACCGAATTGGCCTTGTTGATTTTTTTCCTTATGTGTGTGAGGACTTAGTGCAATTGATCGCTGCACTTTTGGATTTGAATATAGTAGCCACCTGCCATTTTTAGGTTCTAGTTGGGTTTATATCTTTCTTTAAGTAATTTCTTTGTTGTTGAATGTGGAAAGAGTATTAGATTTTGCCTTATGGTTGGTTGTGCGGCATGTGAATAGCCTATCGAACGAATAGGTGTACCTATCAGGAGATAATGCACGTTTCCGGGAGCCTGGTATAGATAATGTAAGTTTCTAATTAAGTCATCTAATGAGATCATACATCATGTCCCATCAAAAAAGATGGGTTAAGAACTAGAATATTAGAGAGGGGAAGGTAGTGTAGATGGAAAAATAGTTTCAAAGTTTCTTTGGACGAAGAAAGGAAATTTGGCACAAAGTTATTGTCTACAAATTTGGAATGCAAGAAGCAGGTTGTCTTGAAAAAAAAAAATGAAATTAGTTGGTATCAACTATCATTGATTGTCTTTCATCTAATAGCTAAGAATTAATTTTGAGAAGTTTTTGAAATTAAGATGGTGGGATATCAATAAAGTTGAAATTTGAGAGGATAGTTGGGTGTATGGGCAGCTTTTGAATGGGTACCAGTGTTATTACGTGCTGCTGTACACATTGGAATTGCAATCAAAGATTTTCAGGATTTGGTGACAAGAAGCTGTAGATTCTACTGGAAAGGAGCTTACTAGAAGAGGAAATATCCGATTTTTGAAGGCTGATAGATTGGTTAAATATGAAGCATTCAAGGATAGATCAAGACAATAGAGCGTTGGTGCTTCATGCTTCAAGGAAACTTCCAATAAGATTTTTGCAGGCAGTGCTTTCATTTTATGAGAAATTTGGTTGGAGAGAAATTAAAGATTTTTATTAGACAACAATTCTTTTGTGAATTTCATGCATAAATGATTTTTTTTTCTTATCAACAATTTTTTGAACTATGTTTGGTTCCTTATTGAGTTTCATGTATCTCCATTGGCTTCAGGTTTTTCTTTTGCTTGGTTGGAATTGCTTACTATGACTTTCCTCTTGTTTGACCCTTTCCATTTCTATTATTTCATTTGTTCTCAATGTAAGGTTGGTTATTAAAAATAGGGGGGAAAATCTATTTATACCCTAAACTTTTGAATTGTATCCATGAAAACATACTAACAATTGCGTTAGTTTAAACCCGGGACTTTCTTAAGTGTACCCAATATACACACTCCTTCAGATTTCATTCAAAAAGCATCATGTGAGACTTATAATAGTTGCAATTAAATTCCTAAGTTATCAAAATGAATCAATTTAGGCCATTTATTAAGATTATCTTTGAATTTCCAACCAAAGGGTCCTTCCCAGTTTTCCTCTTTCAATCTCTCTCGCCAGAACCCTAACCACCAAATGCCTCTGAACCAATGACCTTCATCTCCAAAGTTTCTCATGGTTCTCATTGCCATCATCTTCACCATCGCCTCTGTCGCCACTCAGGAGGCTAGAACTTCCGGTTCGGCCTTCCCTGCCACCTCCATTGCTCCGTCGGTCGTCTCCGCTTGCCTTGCCACCTTCCTTGCTCTCACCTTTGGATCTACTCCCAGATCTATGGTATCAACCTTTCGATGTGGTGATTGATTTTTCCATGGACTCCATGTATTTGCGACCTGTTGTTCTTTTCTTTCTCTTGAAGTAATCTTTGCGACGGAGGAATTTGTTTTAGATGTTTTCTAAGGGATTTTAACTTCTACACGTTTGATACAGAGGACCTCTTTTGTTTAGGCATTCTTATATATAGAATGCAGGTTTTGTTGGTTTGATTAAAAAATTAAGGTTATCTTTGAAAATCATTCATGCATAAGTTCTAAATGTGTAATCTTTTCAAATGTCAACTTAACAAGATTGGAATTGACGCATGCACGATTTATAAAGAAAATCTTAACTAAGACTATGAGAGTCTAAATTGGTTCATTTTATGAAAGTTTAGGGGTTTAACTTATTAGTTCAAAGGTATATATCAATATTTTTCCAATATATAATATATAATGGGGAAGGGAGAGATACAATTCGTCAAACCCCGGGGTGGGGGGGGGGGGGTATGGGAGTGAATGAACAAAGTAAGTTTGGGAAGGGATATGAGTTCAAATGAGCTATGGTAAAGGATCCACTTGTAGAAATATTATTTTTTATCGTTCTGACTGCTTCTATTCCATCTTTGTTGATATATTCCTATTATGTAGGACTTAGATTCGACTTATTTTATCCCTTTTCCATAGTAAAGATTACCCCTTAATTTGCCTGGTATAGACCAGGGAGTAGACTTTTCACCAGTTAATTGTCATCCTTATGGCAGGATGTGATTGTGAAGCTCCGATTCTGGAAGTTAGTAATGTCAGTTTTTGCTTTTTCGTCTACTCCTGAATTGATGTTCGGACTGTTTCTGCTATATTACTTCAGAGTATTTGAGAGACAAATAGGTTCCAACAAATACTCGGTAAGTTTTTTATTCAGTTCATGCTGCAAGATCTCATTAAAAATATGTCATAATGAAGCTACCAGTCATGATCTTTAAAATGAACGGATCACAAAAAAACTCTAATTGTCCTTTTTCCTTAGTGATATGTGTTTTTTCCTTAAATAGATCTATATTAATATTCCATTGTGATACAGGTCTTTATATTGTTCTCAATAATATCCTCCTTACTTTTTGAGGTCCTTGCGATATCATTACTTAAAGGTATGCATTTTCGTTTAACATACTAGTATGCTTGGCAGCTAGCATAATTTTAACCCATGCTTAATTATTGTTTATTTTTTGTCGTCCATCCCTTTACTTTTCATTTTGTAGCTCTGAACTGCCCTCCTATCGATACTTTTTCTCCCCTAATATTTGTAAATAGGACCAGAAGTTTTTCTTAGCAAGTAGCTCACTTGCTGGGGAGTTAGTTGGGTATATTGGCAATCGTGCGTGGTCTACTCCTTTTTTTTTCTTTTTGATGAGTCTACCTATTCATCTATTGTGTAAACTCAAGTAGAAAACCGAAATGAAATTTCATTATTTCCTACAAAATAGGGTAGTGGTGTCCAATATTTAGTACGTGGGATATTGGAGCAGAAATATAGGAGTTAGTGGGCATGTCCTCTCCTAAAAGGTAGGAAATCATTGGACATGTTGAGTGGTCCTGGAGAAATGAGTTGTTGGCGGTTTAACCTCGACTAGGACCACTCCCCCACTACTTCCTAGATTTTAGCTCCTCCCTCCTGTATAAATAGTGGGAGTCTTGGGGTAGAGTGAACACGTAGGATCGTGTTTATCGATTGTCTGCCTTTGTCTTGTGGCCTAATTGTTTTGTTATTGTCAGGAGCATCTTGGTCGTCTTTTATGGGGTTGCAGTTTGCTTTGTAGGGTGTTTGGTATGGCAGTGATGCTTAATAGGGATTGTTTTTCTATGATGGTGGGGATCCTTATGAATGCCCTTGTGAGTTCTCCCTTTTATGAGAAAAGAAAAGCTTTCTGGCTAGCTTGATTTTGTGCAATTTTGCATGGACCGTGGCTTAGGAGGAATAGTAAAATTGTTAGGAGGTTGGAGAAGTTGTTGGAGATATGGGAAGTAGTGAGGTCTAATGTGTCTTTATCAGTGTTCGTTAATTGGGTTTTTTTTTTTAATTTCTACGTTGCCTAATTCTTTTGGATTTGAGACCATTCTTGTAGCTAGTTGTGGACCTTTTTTCAGCTTGTTTTTTGTACTCTTGCATATTCCTTCATTGTTCTCAATGAAAGGTTTTTTACCAAAAGAAAAAAAAAATTGAATCATAACTTCTTAGTTTGGTCAGGGAGCTTCCATTCTTTTTCTTTTGGGTTTCGTCATTCTTTGTTCAATTTAGAAGTAGTGGACGTGGCCTCTCTTTATTTACTCAAAGGCCACTCCTTTAGGCGTGGGGGAAAGATGTGAGTTAGGAGTCCCAATCCTTTGGACGGATTCTTCTGTAAGTCACCTTTTGTAGTATGAGTGACCACTCTTCCTTAGGAAAGAACACGAAAAAAAACGTATGAAAACATGTGGTTTGTTAGCTAAAACAAACTTGTATTGAGGGAGCCGTGACCAAAGGACTCAGGATCTTAATGTGTGATCCAAACACATTAAGTTTGTTTTTTGGTCATGTCTCCCTCGATACAAGTTCATTCTAGCTAACTTCTTTCCAACCATGCTTATAAACTGAACACAATTTTAAAGCATTTGATGATTGTAGCGTGCAATCACACGTGCTCTTTCCAACAATGCTTATAAACTGAACACGTCCATGCTTATGATTTTCATTTAGTTAATACGTATTTTTATTTCTTCTTGAGCAGATCCTGCAGCAAATCTAGTGACTTCTGGACCTTATGGTCTTTTGTTTGCTTCCTTTGTACCCTTCTTCTTTGATATTCCTGTTTCAACTCGGTTCCGTGTATTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTGGCTGGTCTTCAGGTTAAGGACTGTTTGTTTTATACTCTTTTGGATACCTGCTTTACTTTCTTTGGCTGTGTAAGCTAGTTTTATTGTTGGTGTTGCAGCTCCTTCTGTCTTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGAATTCTTGCTGGTTCCTTATATCGGTTGAATGTATTTGGCATCCGCAAGGCCAAGGTTAAATTCAAATTTTGCTTAAACACATTGGTTTCTTAGTTTTCTTTTCTTTCTGAAATTATAATTCTTTTGTTTAAGATCTATCTTAGGATGAGATTTTTTTCCATCAGAGATGCTTAAAGTCCTATTTTCCTTCGGTCTCCTTCCTCTCATGAGGGCGTTTTCAAAGCTTTTTGGTGTAATTCTGTCCGTTCTTGTCAACTTTTTTGGACCTTTTGGTTTGATGCCTCACTTTGTTGGTTTGTTTTGTTTTAGTTCGGTTAGTCTCTTAGCTTCTTATGGGGGCTCTCTTTATAAGTTTTTGATGCTTCTTAGTTGTAGGTTTTTCATCTTATTTGATTTGTGGACTTGTGTCTTTATTTGTCTTTTTAATTGAATGTTTCATATTTTTTATACTTTTTAGCATTAGTCTCTTTTTATTGCATCAATGAAAATTATCATTTCCTTTTCTAAAAAAAATGTTTGGGCTATGGGTATCTGTTCAAACTGTGGAAATTAAAGGTTAGGTGGCTAATAGCCTGTCTTCTCTATTGTCTGACAATCACAAATATATTTTAAAGGATGAAAAATGATTATTTGATGCGTTTCTCCGTGGTGCCATTATTTCACTGCATGCATATACAAGATTCTTTATGCTCAATTTATGAGTTGATGATGCAAACTATGTTTTTGCTTTGCTTCATCTATCCTTTTTATAATCTAAGAATGAAGGTGTTTCTTACCTGCAAGAAAGAAGAAAACAAAGAACGACAGGCTTTTCTTCTGTGCCCAACTTACTTAATTACTTCTATAAGTTTCGTCTTTTGTATATCGACAGACAACCTCATATATACACGAGTCCTTTCCAAAATCCTTTATTATATCCTGATGTTCGAAACTTCGATGTTTTGCGTGAAGATTTCATTCTTTCATTTGGAGTCAGTTTCATGTATGTTCTCTTACTTTTCAATCAGGCCCTTCTAGTTTTCTAAAAATGCAATATTTTTATTATTTGGCTTTTACAGTTTCCAGAGTTTATCAGTTCATTCTTTTCAAGACTTTCTTTGCCATCTGCGGGGAATCCTCCAGCAGCCCCAAACAGAGATGTTAGAGGAAACATGCCATCCTTCATGAGCCGCCCGGTTGAGGTTAGTACATTTGGCGAATGCTTCTATGTGGTGTTGATTTCTCTAAACATACTTTGATGAAAGCTTAAATGACTCTTGGAAGAAAATTTGACTTGTTAGGTTTTAAGCACGAGAACTTACTGTGTCCCGATAGTCGTCAGAATATAGGCATTGCTATTATTGGCATAATCTGCTGACTAATCTTTATAGTTGTAATTAGTGAATATATCGGTGACATGGAAAACATGAAGAACTTAAGTTGATACTTTAACCTCTAAACTGGATTGTTTTCTCTTGGCCAAACTGAGAGATGGTTCAGTTGACATACCGTTATGTTAATAACTACGAGGTTTGTTTGACTCCTCCATTTTCAATTATACTAAAAACTGAATTATTTCCTCTTATAATTTTATTAGAGGAACTATCCTTCGGCGCCAAGTGCCACAGAACCACCAGAAGACGCCATTGCTACACTTGTTTCAATGGGGTTTGACAGAAACTCAGCCAGGCAGGCCCTTGTGCAAGCCAGAAACGACGTTAACATTGCGACAAACATACTTCTTGAATCACAATCGCACTAATTTGAAGAATTTTGAGGGGTAATTTTAAAACTTTGATGTCCCAGGTCGGAGAAACAACCAAATTTGAGTATCGAGGGTTGATGAATTTGCTGACAAACGAGTTTTGATGGTTGGAGGAACTCACCGAGCTGTTTTTTTATGAACTCTTTAAGGTGTCTCCCTTTTGTGTTCCTCTCTACCGTAGCTCTCAAATTTTCTTGATAATTAATGTCCGATTACACAAGATTGCTTAGTTTGTACGTCTTACTACTAAGATCAAAACATCAAGTAGAAATGTTTATGGAACCATAATGTGCAGAATTCTTATGTTATAATCTAAATTTCAGATTTTTACACAATTTTTTTGGCTCCTAATCTTTATTATATTTAGTAAGCAAAC

mRNA sequence

GGGGGGAAGAGGAAGAGATATCGAATTTCCACTCTCAAGTTCCCAACAGACGAAGACGACAAATCGAAATCAAAATCAAATAGAGAAAGAAAGAAGAAGGCTGTGACCGTCTCAGAGAATCGTTCCTTCCTCTCTGAGACGATGAACGGCGGCCCCTCCGGTTTCAACAATGCTCCCGTCACCCGGACCTTCATCATCGCCTCCGCTCTTTTCACCATTTTCTTCGGGATCCAAGGCCGTTCAATTAAGCTTGGTTTGTCCTATCAGGATGTGATTGTGAAGCTCCGATTCTGGAAGTTAGTAATGTCAGTTTTTGCTTTTTCGTCTACTCCTGAATTGATGTTCGGACTGTTTCTGCTATATTACTTCAGAGTATTTGAGAGACAAATAGGTTCCAACAAATACTCGGTCTTTATATTGTTCTCAATAATATCCTCCTTACTTTTTGAGGTCCTTGCGATATCATTACTTAAAGATCCTGCAGCAAATCTAGTGACTTCTGGACCTTATGGTCTTTTGTTTGCTTCCTTTGTACCCTTCTTCTTTGATATTCCTGTTTCAACTCGGTTCCGTGTATTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTGGCTGGTCTTCAGCTCCTTCTGTCTTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGAATTCTTGCTGGTTCCTTATATCGGTTGAATGTATTTGGCATCCGCAAGGCCAAGTTTCCAGAGTTTATCAGTTCATTCTTTTCAAGACTTTCTTTGCCATCTGCGGGGAATCCTCCAGCAGCCCCAAACAGAGATGTTAGAGGAAACATGCCATCCTTCATGAGCCGCCCGGTTGAGAGGAACTATCCTTCGGCGCCAAGTGCCACAGAACCACCAGAAGACGCCATTGCTACACTTGTTTCAATGGGGTTTGACAGAAACTCAGCCAGGCAGGCCCTTGTGCAAGCCAGAAACGACGTTAACATTGCGACAAACATACTTCTTGAATCACAATCGCACTAATTTGAAGAATTTTGAGGGGTAATTTTAAAACTTTGATGTCCCAGGTCGGAGAAACAACCAAATTTGAGTATCGAGGGTTGATGAATTTGCTGACAAACGAGTTTTGATGGTTGGAGGAACTCACCGAGCTGTTTTTTTATGAACTCTTTAAGGTGTCTCCCTTTTGTGTTCCTCTCTACCGTAGCTCTCAAATTTTCTTGATAATTAATGTCCGATTACACAAGATTGCTTAGTTTGTACGTCTTACTACTAAGATCAAAACATCAAGTAGAAATGTTTATGGAACCATAATGTGCAGAATTCTTATGTTATAATCTAAATTTCAGATTTTTACACAATTTTTTTGGCTCCTAATCTTTATTATATTTAGTAAGCAAAC

Coding sequence (CDS)

ATGAACGGCGGCCCCTCCGGTTTCAACAATGCTCCCGTCACCCGGACCTTCATCATCGCCTCCGCTCTTTTCACCATTTTCTTCGGGATCCAAGGCCGTTCAATTAAGCTTGGTTTGTCCTATCAGGATGTGATTGTGAAGCTCCGATTCTGGAAGTTAGTAATGTCAGTTTTTGCTTTTTCGTCTACTCCTGAATTGATGTTCGGACTGTTTCTGCTATATTACTTCAGAGTATTTGAGAGACAAATAGGTTCCAACAAATACTCGGTCTTTATATTGTTCTCAATAATATCCTCCTTACTTTTTGAGGTCCTTGCGATATCATTACTTAAAGATCCTGCAGCAAATCTAGTGACTTCTGGACCTTATGGTCTTTTGTTTGCTTCCTTTGTACCCTTCTTCTTTGATATTCCTGTTTCAACTCGGTTCCGTGTATTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTGGCTGGTCTTCAGCTCCTTCTGTCTTCGTGGAGAAGATCCATCTTACCAGGGATATGCGGAATTCTTGCTGGTTCCTTATATCGGTTGAATGTATTTGGCATCCGCAAGGCCAAGTTTCCAGAGTTTATCAGTTCATTCTTTTCAAGACTTTCTTTGCCATCTGCGGGGAATCCTCCAGCAGCCCCAAACAGAGATGTTAGAGGAAACATGCCATCCTTCATGAGCCGCCCGGTTGAGAGGAACTATCCTTCGGCGCCAAGTGCCACAGAACCACCAGAAGACGCCATTGCTACACTTGTTTCAATGGGGTTTGACAGAAACTCAGCCAGGCAGGCCCTTGTGCAAGCCAGAAACGACGTTAACATTGCGACAAACATACTTCTTGAATCACAATCGCACTAA

Protein sequence

MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAFSSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNYPSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH

Homology

[Close]

BLAST of Cmc04g0110071 vs. NCBI nr
Match: XP_008464944.1 (PREDICTED: rhomboid-like protein 20 [Cucumis melo] >KAA0057225.1 rhomboid-like protein 20 [Cucumis melo var. makuwa] >TYK18737.1 rhomboid-like protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 560.8 bits (1444), Expect = 6.7e-156
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNY 240
           AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNY
Sbjct: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNY 240

Query: 241 PSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 292
           PSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH
Sbjct: 241 PSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of Cmc04g0110071 vs. NCBI nr
Match: XP_004141121.1 (rhomboid-like protein 20 [Cucumis sativus] >KGN59722.1 hypothetical protein Csa_002074 [Cucumis sativus])

HSP 1 Score: 545.4 bits (1404), Expect = 2.9e-151
Identity = 284/291 (97.59%), Postives = 285/291 (97.94%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLR WKLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSI SSLLFEVLAISLLKDPAANLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNY 240
           AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSR VERNY
Sbjct: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRQVERNY 240

Query: 241 PSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 292
           PS P+ATEP EDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQ H
Sbjct: 241 PSVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 291

[Close]

BLAST of Cmc04g0110071 vs. NCBI nr
Match: XP_038904170.1 (rhomboid-like protein 20 isoform X1 [Benincasa hispida])

HSP 1 Score: 541.6 bits (1394), Expect = 4.2e-150
Identity = 281/291 (96.56%), Postives = 286/291 (98.28%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRF KLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFLKLVMSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSII+SLLFEVLAI+LLKDPAANLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAIALLKDPAANLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFG+RFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGLRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNY 240
           AGSLYRLNVFGIRKAK PEFISSFFSRLSLPS GNPPAAPNRDVRGNMPSFMSR VERNY
Sbjct: 181 AGSLYRLNVFGIRKAKLPEFISSFFSRLSLPSVGNPPAAPNRDVRGNMPSFMSRQVERNY 240

Query: 241 PSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 292
           PS P+ATEPPED+IATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH
Sbjct: 241 PSVPTATEPPEDSIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of Cmc04g0110071 vs. NCBI nr
Match: XP_022154191.1 (rhomboid-like protein 20 [Momordica charantia])

HSP 1 Score: 531.6 bits (1368), Expect = 4.4e-147
Identity = 274/292 (93.84%), Postives = 284/292 (97.26%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKL+MSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLLMSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSI++SLLFEVLAISLLKDPA NLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIVTSLLFEVLAISLLKDPAVNLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPP-AAPNRDVRGNMPSFMSRPVERN 240
           AGSLYRLNVFGIRKAKFPEFISSFFS+ SLPS GNPP AAPNRDVRGNMPSF  R VERN
Sbjct: 181 AGSLYRLNVFGIRKAKFPEFISSFFSQFSLPSVGNPPAAAPNRDVRGNMPSFTGRQVERN 240

Query: 241 YPSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 292
           YP+ P+ATEPPED+IATLVSMGFDRNSARQALV+ARNDVN+ATNILLE+QSH
Sbjct: 241 YPTVPTATEPPEDSIATLVSMGFDRNSARQALVRARNDVNMATNILLEAQSH 292

[Close]

BLAST of Cmc04g0110071 vs. NCBI nr
Match: XP_023516629.1 (rhomboid-like protein 20 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 527.7 bits (1358), Expect = 6.3e-146
Identity = 271/291 (93.13%), Postives = 280/291 (96.22%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTR F++ASALFTIFFGIQGRSIKLGLSYQDVIVKLR WKLV SVFAF
Sbjct: 1   MNGGPSGFNNAPVTRNFVVASALFTIFFGIQGRSIKLGLSYQDVIVKLRIWKLVTSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSII+SLLFEVLAISLLKDPAANLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNY 240
           AGSLYRLNVFGIRKAKFPEF+SSFFSR SLPSAGNPPAAP RDVRGNMPSF+ R VER++
Sbjct: 181 AGSLYRLNVFGIRKAKFPEFVSSFFSRFSLPSAGNPPAAPTRDVRGNMPSFVGRQVERSH 240

Query: 241 PSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 292
           P  P+ATEPPED+IATLVSMGFDRNSARQALV A NDVNIATNILLESQSH
Sbjct: 241 PPVPTATEPPEDSIATLVSMGFDRNSARQALVHAGNDVNIATNILLESQSH 291

[Close]

BLAST of Cmc04g0110071 vs. ExPASy Swiss-Prot
Match: Q9LET3 (Rhomboid-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=RBL20 PE=2 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 5.0e-122
Identity = 224/293 (76.45%), Postives = 253/293 (86.35%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGF+NAPVT+ F+I SALFT+FFGIQGRS KLGLSYQD+  K R WKL+MS FAF
Sbjct: 1   MNGGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGL+LLYYFRVFERQIGSNKYSVFILFS   SLL EV+ +SLLKD  ANL+TS
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKDTTANLLTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGL+FASF+PF+ DIPVSTRFRVFGV FSDKSFIYLAG+QLLLSSW+RSI PGICGI+
Sbjct: 121 GPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGICGII 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGN-PPAAPNRDVRGNMPSFMSRPVERN 240
           AGSLYRLN+ GIRKAKFPEF++SFFSRLS PS GN PP AP+R++ G +     R  ER+
Sbjct: 181 AGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTGRRAERS 240

Query: 241 YPS-APSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 292
            P+  PS+ EP E+AI TLVSMGFDRN+ARQALV ARNDVN ATNILLE+QSH
Sbjct: 241 QPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293

[Close]

BLAST of Cmc04g0110071 vs. ExPASy Swiss-Prot
Match: Q8RXQ2 (Rhomboid-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=RBL18 PE=2 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.6e-107
Identity = 202/291 (69.42%), Postives = 233/291 (80.07%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVT+ F+IA+ALFT+FFGI+G S KLGLSYQD+  K R WKL++S FAF
Sbjct: 1   MNGGPSGFNNAPVTKAFVIATALFTVFFGIRGGSSKLGLSYQDIFEKFRIWKLIISAFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120
           SST +L+ GL+LLY+FRVFERQIGSNKYSVFI FS   SL+ E + +SL KDP ANL+TS
Sbjct: 61  SSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDPTANLLTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPY L+FASFVPFF DIPV+ RF V GV FSDKSFIYLAG+QLLLSSW+RSI  GICGI+
Sbjct: 121 GPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFTGICGII 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNY 240
           AGSLYRLN+FGIRKAKFPEF++S FSR SLPS  +    P R      P+   + V    
Sbjct: 181 AGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPPRR----TSPNLGRQAVRAYR 240

Query: 241 PSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 292
              PS TEP E+AIATLVSMGFD+N+ARQALV ARNDVN ATNILLE+ SH
Sbjct: 241 APMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287

[Close]

BLAST of Cmc04g0110071 vs. ExPASy Swiss-Prot
Match: Q4R910 (Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis OX=9541 GN=UBAC2 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-17
Identity = 89/343 (25.95%), Postives = 153/343 (44.61%), Query Frame = 0


Query: 4   GPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVK--LRFWKLVMSVFAFS 63
           G SG   AP++++ ++  +  ++   +     +    Y    VK   + W+L+       
Sbjct: 6   GSSGLYKAPLSKSLLLVPSALSLLLALLLPHCQKLFVYDLHAVKNDFQIWRLICGRIICL 65

Query: 64  STPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLK----DPAANL 123
              +      L+Y FR+FER+ GS K++ F+L S + S LF+ L +  ++      AA+ 
Sbjct: 66  DLKDTFCSSLLIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLVEAMQYFFGITAASN 125

Query: 124 VTSGPYGLLFASFVPFFFDIPVSTRFRVFG-VRFSDKSFIYLAGLQLLLSS---WRRSIL 183
           + SG    +FA FVPF+  IP     ++ G +  ++K+ IY+ GLQL  S    W    +
Sbjct: 126 LPSGFLAPVFALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----I 185

Query: 184 PGICGILAGSLYRLNVFGIRKAK-FPEFISSFFSRLSLP--SAGNPPAAP---------- 243
             I G+++G  Y   +F + +    P +++ FFS    P  S+  P +            
Sbjct: 186 VAISGLMSGLCYNSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGATLDI 245

Query: 244 -----------------------NRDVRGNMPSF--MSRPVER----NY-------PSAP 288
                                   R  +G M ++  +  P+ +    NY       P+AP
Sbjct: 246 QRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAAP 305

[Close]

BLAST of Cmc04g0110071 vs. ExPASy Swiss-Prot
Match: Q5ZJQ8 (Ubiquitin-associated domain-containing protein 2 OS=Gallus gallus OX=9031 GN=UBAC2 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.0e-17
Identity = 88/341 (25.81%), Postives = 148/341 (43.40%), Query Frame = 0


Query: 4   GPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVK--LRFWKLVMSVFAFS 63
           G +G   AP++++ ++  +  +I   +  +  +   +Y    +K   + W+LV       
Sbjct: 6   GSNGLYKAPLSKSLLLVPSAISILLTLLFQHYQKFFAYNLQAIKEDFQIWRLVCGRVICL 65

Query: 64  STPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLK---DPAANLV 123
              +      L+Y FR+FER+ GS K+S F+L +   S LF++L +   +       N +
Sbjct: 66  DLKDTFCSSLLIYNFRIFERRYGSRKFSSFLLGAWTLSALFDLLLVEAAQYVFGITINSL 125

Query: 124 TSGPYGLLFASFVPFFFDIPVSTRFRVFG-VRFSDKSFIYLAGLQLLLSSWRRSILPGIC 183
            SG  G +FA FVPF+  IP     +V G    ++K+ +Y+ GLQLL S     IL  + 
Sbjct: 126 PSGFLGPVFALFVPFYCSIPRVQVTQVLGYFSITNKTLVYILGLQLLTSGSYIWIL-ALS 185

Query: 184 GILAGSLYRLNVFGIRKAK-FPEFISSFFSRLSLPSAGNPPAAPNRDVRGNM-------- 243
           G+++G  Y  ++  + +    P +++  FS    P   +  A P  ++R  M        
Sbjct: 186 GLISGICYNSSILKVHRILCVPSWVAKIFSWTLEPIFSS--AEPTNEIRVGMGATVDIQR 245

Query: 244 ------------------------------------PSFMSRPVER---NYPS---APSA 288
                                               P    R  E    ++PS    P  
Sbjct: 246 QQRMELLDRQIMMSQVAQMRRQRQQQGGMINWNRLFPPLRHRHNENYQDHHPSDQDTPPP 305

[Close]

BLAST of Cmc04g0110071 vs. ExPASy Swiss-Prot
Match: Q8NBM4 (Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBAC2 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.7e-16
Identity = 90/343 (26.24%), Postives = 153/343 (44.61%), Query Frame = 0


Query: 4   GPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVK--LRFWKLVMSVFAFS 63
           G SG   AP++++ ++  +  ++   +     +    Y    VK   + W+L+       
Sbjct: 6   GSSGLYKAPLSKSLLLVPSALSLLLALLLPHCQKLFVYDLHAVKNDFQIWRLICGRIICL 65

Query: 64  STPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLK----DPAANL 123
              +      L+Y FR+FER+ GS K++ F+L S + S LF+ L I  ++      AA+ 
Sbjct: 66  DLKDTFCSSLLIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLIEAMQYFFGITAASN 125

Query: 124 VTSGPYGLLFASFVPFFFDIPVSTRFRVFG-VRFSDKSFIYLAGLQLLLSS---WRRSIL 183
           + SG    +FA FVPF+  IP     ++ G +  ++K+ IY+ GLQL  S    W    +
Sbjct: 126 LPSGFLAPVFALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----I 185

Query: 184 PGICGILAGSLYRLNVFGIRKAK-FPEFISSFFSRLSLP--SAGNPPAAP---------- 243
             I G+++G  Y   +F + +    P +++ FFS    P  S+  P +            
Sbjct: 186 VAISGLMSGLCYDSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGATLDI 245

Query: 244 -----------------------NRDVRGNMPSF--MSRPVER----NY-------PSAP 288
                                   R  +G M ++  +  P+ +    NY       P+AP
Sbjct: 246 QRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAAP 305

[Close]

BLAST of Cmc04g0110071 vs. ExPASy TrEMBL
Match: A0A5D3D5B1 (Rhomboid-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00390 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.3e-156
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNY 240
           AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNY
Sbjct: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNY 240

Query: 241 PSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 292
           PSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH
Sbjct: 241 PSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of Cmc04g0110071 vs. ExPASy TrEMBL
Match: A0A1S3CMQ9 (rhomboid-like protein 20 OS=Cucumis melo OX=3656 GN=LOC103502692 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.3e-156
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNY 240
           AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNY
Sbjct: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNY 240

Query: 241 PSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 292
           PSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH
Sbjct: 241 PSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of Cmc04g0110071 vs. ExPASy TrEMBL
Match: A0A0A0LG81 (UBA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G840970 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.4e-151
Identity = 284/291 (97.59%), Postives = 285/291 (97.94%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLR WKLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSI SSLLFEVLAISLLKDPAANLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNY 240
           AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSR VERNY
Sbjct: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRQVERNY 240

Query: 241 PSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 292
           PS P+ATEP EDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQ H
Sbjct: 241 PSVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 291

[Close]

BLAST of Cmc04g0110071 vs. ExPASy TrEMBL
Match: A0A6J1DN01 (rhomboid-like protein 20 OS=Momordica charantia OX=3673 GN=LOC111021509 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.1e-147
Identity = 274/292 (93.84%), Postives = 284/292 (97.26%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKL+MSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLLMSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSI++SLLFEVLAISLLKDPA NLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIVTSLLFEVLAISLLKDPAVNLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPP-AAPNRDVRGNMPSFMSRPVERN 240
           AGSLYRLNVFGIRKAKFPEFISSFFS+ SLPS GNPP AAPNRDVRGNMPSF  R VERN
Sbjct: 181 AGSLYRLNVFGIRKAKFPEFISSFFSQFSLPSVGNPPAAAPNRDVRGNMPSFTGRQVERN 240

Query: 241 YPSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 292
           YP+ P+ATEPPED+IATLVSMGFDRNSARQALV+ARNDVN+ATNILLE+QSH
Sbjct: 241 YPTVPTATEPPEDSIATLVSMGFDRNSARQALVRARNDVNMATNILLEAQSH 292

[Close]

BLAST of Cmc04g0110071 vs. ExPASy TrEMBL
Match: A0A6J1EXA3 (rhomboid-like protein 20 OS=Cucurbita moschata OX=3662 GN=LOC111437003 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 8.9e-146
Identity = 270/291 (92.78%), Postives = 281/291 (96.56%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVTR+F++ASALFTIFFGIQGRSIKLGLSYQDVIVKLR WKLV SVFAF
Sbjct: 1   MNGGPSGFNNAPVTRSFVVASALFTIFFGIQGRSIKLGLSYQDVIVKLRIWKLVTSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSII+SLLFEVLAISLLKDPAANLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNY 240
           AGSLYRLNVFGIRKAKFPEF+SSFFSR SLPSAGNPPAAP RDVRGNMPSF+ R VER++
Sbjct: 181 AGSLYRLNVFGIRKAKFPEFVSSFFSRFSLPSAGNPPAAPTRDVRGNMPSFVGRQVERSH 240

Query: 241 PSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 292
           P  P+ATEPPED+IATLVSMGFDRNSARQALV A NDVNIAT+ILLESQSH
Sbjct: 241 PPVPTATEPPEDSIATLVSMGFDRNSARQALVHAGNDVNIATSILLESQSH 291

[Close]

BLAST of Cmc04g0110071 vs. TAIR 10
Match: AT3G56740.1 (Ubiquitin-associated (UBA) protein )

HSP 1 Score: 438.7 bits (1127), Expect = 3.6e-123
Identity = 224/293 (76.45%), Postives = 253/293 (86.35%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGF+NAPVT+ F+I SALFT+FFGIQGRS KLGLSYQD+  K R WKL+MS FAF
Sbjct: 1   MNGGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGL+LLYYFRVFERQIGSNKYSVFILFS   SLL EV+ +SLLKD  ANL+TS
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKDTTANLLTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGL+FASF+PF+ DIPVSTRFRVFGV FSDKSFIYLAG+QLLLSSW+RSI PGICGI+
Sbjct: 121 GPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGICGII 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGN-PPAAPNRDVRGNMPSFMSRPVERN 240
           AGSLYRLN+ GIRKAKFPEF++SFFSRLS PS GN PP AP+R++ G +     R  ER+
Sbjct: 181 AGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTGRRAERS 240

Query: 241 YPS-APSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 292
            P+  PS+ EP E+AI TLVSMGFDRN+ARQALV ARNDVN ATNILLE+QSH
Sbjct: 241 QPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293

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BLAST of Cmc04g0110071 vs. TAIR 10
Match: AT2G41160.1 (Ubiquitin-associated (UBA) protein )

HSP 1 Score: 390.6 bits (1002), Expect = 1.1e-108
Identity = 202/291 (69.42%), Postives = 233/291 (80.07%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60
           MNGGPSGFNNAPVT+ F+IA+ALFT+FFGI+G S KLGLSYQD+  K R WKL++S FAF
Sbjct: 1   MNGGPSGFNNAPVTKAFVIATALFTVFFGIRGGSSKLGLSYQDIFEKFRIWKLIISAFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120
           SST +L+ GL+LLY+FRVFERQIGSNKYSVFI FS   SL+ E + +SL KDP ANL+TS
Sbjct: 61  SSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDPTANLLTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPY L+FASFVPFF DIPV+ RF V GV FSDKSFIYLAG+QLLLSSW+RSI  GICGI+
Sbjct: 121 GPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFTGICGII 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRPVERNY 240
           AGSLYRLN+FGIRKAKFPEF++S FSR SLPS  +    P R      P+   + V    
Sbjct: 181 AGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPPRR----TSPNLGRQAVRAYR 240

Query: 241 PSAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 292
              PS TEP E+AIATLVSMGFD+N+ARQALV ARNDVN ATNILLE+ SH
Sbjct: 241 APMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287

The following BLAST results are available for this feature:

BLAST of Cmc04g0110071 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464944.1	6.7e-156	100.00	PREDICTED: rhomboid-like protein 20 [Cucumis melo] >KAA0057225.1 rhomboid-like p...	[more]
XP_004141121.1	2.9e-151	97.59	rhomboid-like protein 20 [Cucumis sativus] >KGN59722.1 hypothetical protein Csa_...	[more]
XP_038904170.1	4.2e-150	96.56	rhomboid-like protein 20 isoform X1 [Benincasa hispida]	[more]
XP_022154191.1	4.4e-147	93.84	rhomboid-like protein 20 [Momordica charantia]	[more]
XP_023516629.1	6.3e-146	93.13	rhomboid-like protein 20 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc04g0110071 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LET3	5.0e-122	76.45	Rhomboid-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=RBL20 PE=2 SV=1	[more]
Q8RXQ2	1.6e-107	69.42	Rhomboid-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=RBL18 PE=2 SV=1	[more]
Q4R910	1.5e-17	25.95	Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis OX=9541 ...	[more]
Q5ZJQ8	2.0e-17	25.81	Ubiquitin-associated domain-containing protein 2 OS=Gallus gallus OX=9031 GN=UBA...	[more]
Q8NBM4	3.7e-16	26.24	Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBAC...	[more]

BLAST of Cmc04g0110071 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D5B1	3.3e-156	100.00	Rhomboid-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CMQ9	3.3e-156	100.00	rhomboid-like protein 20 OS=Cucumis melo OX=3656 GN=LOC103502692 PE=4 SV=1	[more]
A0A0A0LG81	1.4e-151	97.59	UBA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G840970 PE=4 SV...	[more]
A0A6J1DN01	2.1e-147	93.84	rhomboid-like protein 20 OS=Momordica charantia OX=3673 GN=LOC111021509 PE=4 SV=...	[more]
A0A6J1EXA3	8.9e-146	92.78	rhomboid-like protein 20 OS=Cucurbita moschata OX=3662 GN=LOC111437003 PE=3 SV=1	[more]

BLAST of Cmc04g0110071 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56740.1	3.6e-123	76.45	Ubiquitin-associated (UBA) protein	[more]
AT2G41160.1	1.1e-108	69.42	Ubiquitin-associated (UBA) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 250..287 e-value: 1.1E-10 score: 51.5
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 250..285 e-value: 2.0E-11 score: 43.6
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 248..288 score: 14.667439
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 48..190 e-value: 1.5E-5 score: 25.1
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 9..188 e-value: 9.1E-8 score: 34.1
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 9..186
None	No IPR available	GENE3D	1.10.8.10		coord: 231..291 e-value: 4.6E-14 score: 54.2
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 234..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0110071.1	Cmc04g0110071.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004252	serine-type endopeptidase activity