Cmc04g0106841 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0106841
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionNBS-LRR type resistance protein
LocationCMiso1.1chr04: 25085557 .. 25086175 (+)
RNA-Seq ExpressionCmc04g0106841
SyntenyCmc04g0106841
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGGGAGAGAATACATTGAGGTCGTCAAGGGCGACCTCCAGGTAATTAAATGCACTACACATTTATATATGATTTCATTTGAAACATATCTAACTTTAACCAATCTAATGTGTTATGTTTGTAATGTGCAGCGATTCTTTGTGCTTGATTTCAACGATCAAGCAATGAACAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCATAAACATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGGACGTGATGAGGATTGGCACTTCCTCTGCGACCATTATATCAGCCGTGCATTCCAGGTATTTGTCATGATTAATTATGATAACAAGTTTTTATATGTATAAGAAATAAACAATATAATTGTTTTAATGCAGGAGCAATCACGGACAAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCGAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAAAGAAGAGGGCAGCCGGTCGATCGTGTGGAATTGTTCCGGGAAACACACGTTCGAGCTGGGACATTCGTGTCGCAGGCCGCCGAGGATGCGCATGTAA

mRNA sequence

GTTGGGAGAGAATACATTGAGGTCGTCAAGGGCGACCTCCAGCGATTCTTTGTGCTTGATTTCAACGATCAAGCAATGAACAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCATAAACATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGGACGTGATGAGGATTGGCACTTCCTCTGCGACCATTATATCAGCCGTGCATTCCAGGAGCAATCACGGACAAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCGAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAAAGAAGAGGGCAGCCGGTCGATCGTGTGGAATTGTTCCGGGAAACACACGTTCGAGCTGGGACATTCGTGTCGCAGGCCGCCGAGGATGCGCATGTAA

Coding sequence (CDS)

ATGAGGATTGGCACTTCCTCTGCGACCATTATATCAGCCGTGCATTCCAGGAGCAATCACGGACAAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCGAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAAAGAAGAGGGCAGCCGGTCGATCGTGTGGAATTGTTCCGGGAAACACACGTTCGAGCTGGGACATTCGTGTCGCAGGCCGCCGAGGATGCGCATGTAA

Protein sequence

MRIGTSSATIISAVHSRSNHGQTRLLDRSSLTIIVAGRSRFYNDSMSSLKEEGSRSIVWNCSGKHTFELGHSCRRPPRMRM
Homology
[Close]
BLAST of Cmc04g0106841 vs. NCBI nr
Match: KAA0040675.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 156.8 bits (395), Expect = 8.1e-35
Identity = 76/81 (93.83%), Postives = 79/81 (97.53%), Query Frame = 0 

Query: 1   MRIGTSSATIISAVHSRSNHGQTRLLDRSSLTIIVAGRSRFYNDSMSSLKEEGSRSIVWN 60
           MRIGTSS TIISA+HSRSNHGQTRLLDRSSLTIIVAG SRFYNDSMSSLKEEGSRS+VWN
Sbjct: 128 MRIGTSSTTIISAMHSRSNHGQTRLLDRSSLTIIVAGPSRFYNDSMSSLKEEGSRSVVWN 187

Query: 61  CSGKHTFELGHSCRRPPRMRM 82
           CSGKHTFELG+SCRRPPRMRM
Sbjct: 188 CSGKHTFELGYSCRRPPRMRM 208

[Close]
BLAST of Cmc04g0106841 vs. NCBI nr
Match: KAA0036833.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYJ95900.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 155.6 bits (392), Expect = 1.8e-34
Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0 

Query: 1   MRIGTSSATIISAVHSRSNHGQTRLLDRSSLTIIVAGRSRFYNDSMSSLKEEGSRSIVWN 60
           MRIGTSS TIISAVHSRSNHG+TRLLDRSSLTIIV G SRFYNDSMSSLKEEGSRSIVWN
Sbjct: 121 MRIGTSSTTIISAVHSRSNHGRTRLLDRSSLTIIVEGPSRFYNDSMSSLKEEGSRSIVWN 180

Query: 61  CSGKHTFELGHSCRRPPRMRM 82
           CSGKHTFELGHSCRRPPRMR+
Sbjct: 181 CSGKHTFELGHSCRRPPRMRI 201

[Close]
BLAST of Cmc04g0106841 vs. NCBI nr
Match: TYK08760.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 4.0e-34
Identity = 75/81 (92.59%), Postives = 78/81 (96.30%), Query Frame = 0 

Query: 1   MRIGTSSATIISAVHSRSNHGQTRLLDRSSLTIIVAGRSRFYNDSMSSLKEEGSRSIVWN 60
           MRIGTSS TIISA+HSRSNHGQTRLLDRSSLTIIVAG SRFYNDSMSSLKEE SRS+VWN
Sbjct: 128 MRIGTSSTTIISAMHSRSNHGQTRLLDRSSLTIIVAGPSRFYNDSMSSLKEEASRSVVWN 187

Query: 61  CSGKHTFELGHSCRRPPRMRM 82
           CSGKHTFELG+SCRRPPRMRM
Sbjct: 188 CSGKHTFELGYSCRRPPRMRM 208

[Close]
BLAST of Cmc04g0106841 vs. NCBI nr
Match: ADN34241.1 (NBS-LRR type resistance protein [Cucumis melo subsp. melo])

HSP 1 Score: 144.4 bits (363), Expect = 4.2e-31
Identity = 73/81 (90.12%), Postives = 75/81 (92.59%), Query Frame = 0 

Query: 1  MRIGTSSATIISAVHSRSNHGQTRLLDRSSLTIIVAGRSRFYNDSMSSLKEEGSRSIVWN 60
          MRI TSSATIISAVHSRSNH +TRLLDRSSLTIIVAG S FYNDSMSSLKEEGSRSIVWN
Sbjct: 1  MRIDTSSATIISAVHSRSNHRRTRLLDRSSLTIIVAGPSHFYNDSMSSLKEEGSRSIVWN 60

Query: 61 CSGKHTFELGHSCRRPPRMRM 82
          CS KHTFELGHSCRR PRMR+
Sbjct: 61 CSEKHTFELGHSCRRLPRMRI 81

[Close]
BLAST of Cmc04g0106841 vs. NCBI nr
Match: KAA0055453.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK08935.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 140.2 bits (352), Expect = 7.9e-30
Identity = 70/81 (86.42%), Postives = 74/81 (91.36%), Query Frame = 0 

Query: 1   MRIGTSSATIISAVHSRSNHGQTRLLDRSSLTIIVAGRSRFYNDSMSSLKEEGSRSIVWN 60
           MRIGTSSATIIS VHSRSNHG+TR+LD+SSLTI VAG SRFYNDSMSSLKE+GSRSIVWN
Sbjct: 247 MRIGTSSATIISVVHSRSNHGRTRMLDKSSLTIRVAGPSRFYNDSMSSLKEKGSRSIVWN 306

Query: 61  CSGKHTFELGHSCRRPPRMRM 82
             GK TFELGHSCRRPPRM M
Sbjct: 307 YFGKQTFELGHSCRRPPRMCM 327

[Close]
BLAST of Cmc04g0106841 vs. ExPASy TrEMBL
Match: A0A5A7TGV8 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold540G00120 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.9e-35
Identity = 76/81 (93.83%), Postives = 79/81 (97.53%), Query Frame = 0 

Query: 1   MRIGTSSATIISAVHSRSNHGQTRLLDRSSLTIIVAGRSRFYNDSMSSLKEEGSRSIVWN 60
           MRIGTSS TIISA+HSRSNHGQTRLLDRSSLTIIVAG SRFYNDSMSSLKEEGSRS+VWN
Sbjct: 128 MRIGTSSTTIISAMHSRSNHGQTRLLDRSSLTIIVAGPSRFYNDSMSSLKEEGSRSVVWN 187

Query: 61  CSGKHTFELGHSCRRPPRMRM 82
           CSGKHTFELG+SCRRPPRMRM
Sbjct: 188 CSGKHTFELGYSCRRPPRMRM 208

[Close]
BLAST of Cmc04g0106841 vs. ExPASy TrEMBL
Match: A0A5A7T1N6 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002030 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 8.8e-35
Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0 

Query: 1   MRIGTSSATIISAVHSRSNHGQTRLLDRSSLTIIVAGRSRFYNDSMSSLKEEGSRSIVWN 60
           MRIGTSS TIISAVHSRSNHG+TRLLDRSSLTIIV G SRFYNDSMSSLKEEGSRSIVWN
Sbjct: 121 MRIGTSSTTIISAVHSRSNHGRTRLLDRSSLTIIVEGPSRFYNDSMSSLKEEGSRSIVWN 180

Query: 61  CSGKHTFELGHSCRRPPRMRM 82
           CSGKHTFELGHSCRRPPRMR+
Sbjct: 181 CSGKHTFELGHSCRRPPRMRI 201

[Close]
BLAST of Cmc04g0106841 vs. ExPASy TrEMBL
Match: A0A5D3CBP1 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00090 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.0e-34
Identity = 75/81 (92.59%), Postives = 78/81 (96.30%), Query Frame = 0 

Query: 1   MRIGTSSATIISAVHSRSNHGQTRLLDRSSLTIIVAGRSRFYNDSMSSLKEEGSRSIVWN 60
           MRIGTSS TIISA+HSRSNHGQTRLLDRSSLTIIVAG SRFYNDSMSSLKEE SRS+VWN
Sbjct: 128 MRIGTSSTTIISAMHSRSNHGQTRLLDRSSLTIIVAGPSRFYNDSMSSLKEEASRSVVWN 187

Query: 61  CSGKHTFELGHSCRRPPRMRM 82
           CSGKHTFELG+SCRRPPRMRM
Sbjct: 188 CSGKHTFELGYSCRRPPRMRM 208

[Close]
BLAST of Cmc04g0106841 vs. ExPASy TrEMBL
Match: E5GCP2 (NBS-LRR type resistance protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.0e-31
Identity = 73/81 (90.12%), Postives = 75/81 (92.59%), Query Frame = 0 

Query: 1  MRIGTSSATIISAVHSRSNHGQTRLLDRSSLTIIVAGRSRFYNDSMSSLKEEGSRSIVWN 60
          MRI TSSATIISAVHSRSNH +TRLLDRSSLTIIVAG S FYNDSMSSLKEEGSRSIVWN
Sbjct: 1  MRIDTSSATIISAVHSRSNHRRTRLLDRSSLTIIVAGPSHFYNDSMSSLKEEGSRSIVWN 60

Query: 61 CSGKHTFELGHSCRRPPRMRM 82
          CS KHTFELGHSCRR PRMR+
Sbjct: 61 CSEKHTFELGHSCRRLPRMRI 81

[Close]
BLAST of Cmc04g0106841 vs. ExPASy TrEMBL
Match: A0A5A7UHP1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00230 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.8e-30
Identity = 70/81 (86.42%), Postives = 74/81 (91.36%), Query Frame = 0 

Query: 1   MRIGTSSATIISAVHSRSNHGQTRLLDRSSLTIIVAGRSRFYNDSMSSLKEEGSRSIVWN 60
           MRIGTSSATIIS VHSRSNHG+TR+LD+SSLTI VAG SRFYNDSMSSLKE+GSRSIVWN
Sbjct: 247 MRIGTSSATIISVVHSRSNHGRTRMLDKSSLTIRVAGPSRFYNDSMSSLKEKGSRSIVWN 306

Query: 61  CSGKHTFELGHSCRRPPRMRM 82
             GK TFELGHSCRRPPRM M
Sbjct: 307 YFGKQTFELGHSCRRPPRMCM 327

The following BLAST results are available for this feature:
BLAST of Cmc04g0106841 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0040675.18.1e-3593.83NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0036833.11.8e-3493.83NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYJ95900.1 NBS-LRR t... [more]
TYK08760.14.0e-3492.59NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
ADN34241.14.2e-3190.12NBS-LRR type resistance protein [Cucumis melo subsp. melo][more]
KAA0055453.17.9e-3086.42CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK08935.1 CACTA en-... [more]
BLAST of Cmc04g0106841 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc04g0106841 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TGV83.9e-3593.83NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7T1N68.8e-3593.83NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3CBP12.0e-3492.59NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
E5GCP22.0e-3190.12NBS-LRR type resistance protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A5A7UHP13.8e-3086.42CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
BLAST of Cmc04g0106841 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0106841.1Cmc04g0106841.1mRNA