Cmc04g0104791 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0104791
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
LocationCMiso1.1chr04: 22937839 .. 22938947 (-)
RNA-Seq ExpressionCmc04g0104791
SyntenyCmc04g0104791
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTTCGAATAAAATATAATCCCGATGGCACTATTGCTCGTCACAAAGCGCGACTGGTTGCTAAAGGTTATCATTAGGTACAAGGTTTTGATTTTGATGAAACATTTAGTCCTGTTGTTAAGAAACCTACCATACGCATCATTCTTGCTCTTGCTGCTCAATACAATTGGTCCTTAACCCAGTTAGATGTCAAAAATGTCTTTCTTCATGGTATTCTTCAGGAAACAGTTTACATGGCTCAACCTATTGGCTTCCAAGACAAAACATGTCCAATCATGTGTGTCTCCTCCACAAGAGTCTTTATGGTCTCAAACAGGCCCCTCGCGCTTGATTTGAACGCTTTACATCTTATTTATTCACTTTGGGTTTTGTTGCGTCTACAGCTAATCCCTCATTATTCATTCGATCAGTCGGATCCTCTCTCACTTACTTACTTTTGTATGTAGATGACATCATTGTCATTGGACCTGACTATTTATACATTTTTGTTCTTAAAAACCAATTGGCCCTGGAATTCAAAATATCCGACCTTGGTCCTTCAAAGTACTTTCTTGGTCTCAAAATCCAATCCTCCATTGGTGGCATATCTGTTAACCAAGCTAAATATCTCATTGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTTGATCTTTATACAATTGCACCACCATTTAATGATCCATCACTTTATCGCAGACTAGTTGGTTCCTTGCAATATCTTACCTTCACTCGTCCTGATATTGCATTCTCTGTAAATCGTGTTAGTCAGTTCATGCATAAACCAACTGTCATTCACTTTTCAGCTGTCAAACGCATCCTCAGATATCTCCGTGGTACTCCAACCCTTGGAATAAAATTTCGAAAAGGTTCGTTTTCTCTACAAACCTTTTGTGATTCTGATTGGGCAGGTGATACATCTGATCGACGTTCCACCTCCGACTTTATCACCTTTCTCGGTCCTAATCCAATATCTTGGTCTTCTAAAAAGCAATCTACCGTCTCTCGTTCCTCCATAGAAGTAGAATATTGTTCCCTTGCCACTACTACTGTCGATCTTTACTGGATCCGATAG

mRNA sequence

ATGGGTTTTCGAATAAAATATAATCCCGATGGCACTATTGCTCGTCACAAAGCGCGACTGGTTGCTAAAGCTAATCCCTCATTATTCATTCGATCAGTCGGATCCTCTCTCACTTACTTACTTTTGTATGTAGATGACATCATTGTCATTGGACCTGACTATTTATACATTTTTGTTCTTAAAAACCAATTGGCCCTGGAATTCAAAATATCCGACCTTGGTCCTTCAAAGTACTTTCTTGGTCTCAAAATCCAATCCTCCATTGGTGGCATATCTGTTAACCAAGCTAAATATCTCATTGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTTGATCTTTATACAATTGCACCACCATTTAATGATCCATCACTTTATCGCAGACTAGTTGGTTCCTTGCAATATCTTACCTTCACTCGTCCTGATATTGCATTCTCTGTAAATCGTGTTAGTCAGTTCATGCATAAACCAACTGTCATTCACTTTTCAGCTGTCAAACGCATCCTCAGATATCTCCGTGGTACTCCAACCCTTGGAATAAAATTTCGAAAAGGTTCGTTTTCTCTACAAACCTTTTGTGATTCTGATTGGGCAGGTGATACATCTGATCGACGTTCCACCTCCGACTTTATCACCTTTCTCGGTCCTAATCCAATATCTTGGTCTTCTAAAAAGCAATCTACCGTCTCTCGTTCCTCCATAGAAGTAGAATATTGTTCCCTTGCCACTACTACTGTCGATCTTTACTGGATCCGATAG

Coding sequence (CDS)

ATGGGTTTTCGAATAAAATATAATCCCGATGGCACTATTGCTCGTCACAAAGCGCGACTGGTTGCTAAAGCTAATCCCTCATTATTCATTCGATCAGTCGGATCCTCTCTCACTTACTTACTTTTGTATGTAGATGACATCATTGTCATTGGACCTGACTATTTATACATTTTTGTTCTTAAAAACCAATTGGCCCTGGAATTCAAAATATCCGACCTTGGTCCTTCAAAGTACTTTCTTGGTCTCAAAATCCAATCCTCCATTGGTGGCATATCTGTTAACCAAGCTAAATATCTCATTGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTTGATCTTTATACAATTGCACCACCATTTAATGATCCATCACTTTATCGCAGACTAGTTGGTTCCTTGCAATATCTTACCTTCACTCGTCCTGATATTGCATTCTCTGTAAATCGTGTTAGTCAGTTCATGCATAAACCAACTGTCATTCACTTTTCAGCTGTCAAACGCATCCTCAGATATCTCCGTGGTACTCCAACCCTTGGAATAAAATTTCGAAAAGGTTCGTTTTCTCTACAAACCTTTTGTGATTCTGATTGGGCAGGTGATACATCTGATCGACGTTCCACCTCCGACTTTATCACCTTTCTCGGTCCTAATCCAATATCTTGGTCTTCTAAAAAGCAATCTACCGTCTCTCGTTCCTCCATAGAAGTAGAATATTGTTCCCTTGCCACTACTACTGTCGATCTTTACTGGATCCGATAG

Protein sequence

MGFRIKYNPDGTIARHKARLVAKANPSLFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKIQSSIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVDLYWIR
Homology
BLAST of Cmc04g0104791 vs. NCBI nr
Match: XP_016902755.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo] >KAA0025330.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 471.9 bits (1213), Expect = 3.7e-129
Identity = 238/239 (99.58%), Postives = 239/239 (100.00%), Query Frame = 0

Query: 25  NPSLFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKI 84
           NPSLFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKI
Sbjct: 166 NPSLFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKI 225

Query: 85  QSSIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSL 144
           QSSIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSL
Sbjct: 226 QSSIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSL 285

Query: 145 QYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFC 204
           QYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFR+GSFSLQTFC
Sbjct: 286 QYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFREGSFSLQTFC 345

Query: 205 DSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVDLYWIR 264
           DSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVDLYWIR
Sbjct: 346 DSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVDLYWIR 404

BLAST of Cmc04g0104791 vs. NCBI nr
Match: KAA0057165.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27148.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 437.2 bits (1123), Expect = 1.0e-118
Identity = 236/319 (73.98%), Postives = 243/319 (76.18%), Query Frame = 0

Query: 3   FRIKYNPDGTIARHKARLVAK--------------------------------------- 62
           FRIKYNP+GTIARHK RLVAK                                       
Sbjct: 32  FRIKYNPNGTIARHKVRLVAKGYHQETVYMAQPTGFQDKTCPNHVCLLYKSLYGLKQAPR 91

Query: 63  -------------------ANPSLFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQL 122
                              A+PSLFIRSVGSSLTYLLLYV +IIV GPDYLYIFVLKNQL
Sbjct: 92  AWFERFRSYLFTLDFVASTADPSLFIRSVGSSLTYLLLYVGNIIVAGPDYLYIFVLKNQL 151

Query: 123 ALEFKISDLGPSKYFLGLKIQSSIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDL 182
           ALEFKISDLGP KYFLGL+IQSSI GI VNQAKYL DLLHTS MTSAK CITPMSTSLD 
Sbjct: 152 ALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSRMTSAKCCITPMSTSLDP 211

Query: 183 YTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLR 242
           YTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFS+NRVSQFMHKPTVIHFSAVKRILRYLR
Sbjct: 212 YTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSINRVSQFMHKPTVIHFSAVKRILRYLR 271

Query: 243 GTPTLGIKFRKGSFSLQTFCDSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSS 264
           GTPTLGIKFRKGSFSLQTFCDS+WAGDTSD+RSTS FI FLG NPISWSSKKQSTVSRSS
Sbjct: 272 GTPTLGIKFRKGSFSLQTFCDSEWAGDTSDQRSTSSFIAFLGSNPISWSSKKQSTVSRSS 331

BLAST of Cmc04g0104791 vs. NCBI nr
Match: KAA0045362.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 432.6 bits (1111), Expect = 2.5e-117
Identity = 239/341 (70.09%), Postives = 243/341 (71.26%), Query Frame = 0

Query: 3   FRIKYNPDGTIARHKARLVAK--------------------------------------- 62
           FRIKYNPDGTIARHKARLVAK                                       
Sbjct: 222 FRIKYNPDGTIARHKARLVAKGYHQVQGFDFDETFSPVVKKPTIRIILALAAQYNWSLTQ 281

Query: 63  -----------------------------------------ANPSLFIRSVGSSLTYLLL 122
                                                    A+PSLFIRSVGS L+YLLL
Sbjct: 282 LDVKNDFFHGILQETVYMTQSTDFQDKTCPNHVCLLHKSLYADPSLFIRSVGSFLSYLLL 341

Query: 123 YVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKIQSSIGGISVNQAKYLIDL 182
           YVDDIIV G DYLYIFVLKNQLALEFKIS+LGP KYFLGL+IQSSI GI VNQAKYL DL
Sbjct: 342 YVDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDL 401

Query: 183 LHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVS 242
           LHTSGMTSAKSCITPMSTSLDLYTIAPPFNDP LYRRLVGSLQYLTFTRPDIA SVNRVS
Sbjct: 402 LHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIALSVNRVS 461

Query: 243 QFMHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWAGDTSDRRSTSDFI 264
           QFMHKPTVIHFSAVKRILRYL GTPTLGIKFRKGSFSLQTFCDSDWA DTSDRRSTS FI
Sbjct: 462 QFMHKPTVIHFSAVKRILRYLCGTPTLGIKFRKGSFSLQTFCDSDWAADTSDRRSTSGFI 521

BLAST of Cmc04g0104791 vs. NCBI nr
Match: XP_016901810.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 411.8 bits (1057), Expect = 4.6e-111
Identity = 222/292 (76.03%), Postives = 225/292 (77.05%), Query Frame = 0

Query: 3   FRIKYNPDGTIARHKARLVAK--------------------------------------- 62
           FRIKYNPDGTI RHKARLV K                                       
Sbjct: 32  FRIKYNPDGTIVRHKARLVVKGYHQVQGFDFDETFSPVVKKPTIHIILALAAQYNWSLTQ 91

Query: 63  ---------ANPSLFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLG 122
                    A+PSLFIRSVGSSLTYLLLYVDDIIV  PDYLYI VLKNQLALEFKISDL 
Sbjct: 92  LDVKNAFLHADPSLFIRSVGSSLTYLLLYVDDIIVTEPDYLYISVLKNQLALEFKISDLD 151

Query: 123 PSKYFLGLKIQSSIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDP 182
           P KYFLGL+IQSSI GI VNQAKYL DLLHTSGMTS KSCITPMSTS DLYTIAPPFNDP
Sbjct: 152 PLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSVKSCITPMSTSFDLYTIAPPFNDP 211

Query: 183 SLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFR 242
           SLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPT+IHFSAVKRILRYLRGT T GIKFR
Sbjct: 212 SLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTIIHFSAVKRILRYLRGTLTFGIKFR 271

Query: 243 KGSFSLQTFCDSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSSIE 247
           KGSFSLQTFCDSDWAGDTSDRRSTS FI FL  NPISWSSKKQSTVSRSS E
Sbjct: 272 KGSFSLQTFCDSDWAGDTSDRRSTSSFIAFLDSNPISWSSKKQSTVSRSSTE 323

BLAST of Cmc04g0104791 vs. NCBI nr
Match: TYK06402.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 379.4 bits (973), Expect = 2.5e-101
Identity = 198/227 (87.22%), Postives = 202/227 (88.99%), Query Frame = 0

Query: 37  LTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKIQSSIGGISVNQA 96
           L++LLLYVDDIIV GPDYLYI V KNQLALEFKISDLGP KYFLGL+IQSSI GI VNQA
Sbjct: 441 LSHLLLYVDDIIVTGPDYLYISVFKNQLALEFKISDLGPLKYFLGLEIQSSIDGIFVNQA 500

Query: 97  KYLIDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAF 156
           KYL DLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQ LTFTR DIAF
Sbjct: 501 KYLNDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQCLTFTRSDIAF 560

Query: 157 SVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWAGDTSDRR 216
           SVNRVSQFMHKPTVIHF AVKRILRYLRGTPTLGIKF K  F L  FCD DWAGDTSDRR
Sbjct: 561 SVNRVSQFMHKPTVIHFLAVKRILRYLRGTPTLGIKFEKVRF-LYKFCDFDWAGDTSDRR 620

Query: 217 STSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVDLYWIR 264
           STS FI F G NPISWSSKK+STVSRS IE EY SLATTT DLYWIR
Sbjct: 621 STSGFIAFFGSNPISWSSKKKSTVSRSCIEAEYRSLATTTADLYWIR 666

BLAST of Cmc04g0104791 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.4e-54
Identity = 115/242 (47.52%), Postives = 159/242 (65.70%), Query Frame = 0

Query: 24   ANPSLFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLK 83
            ++ SLF+   G S+ Y+L+YVDDI++ G D   +    + L+  F + D     YFLG++
Sbjct: 1131 SDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE 1190

Query: 84   IQSSIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTS--LDLYTIAPPFNDPSLYRRLV 143
             +    G+ ++Q +Y++DLL  + M +AK   TPM+ S  L LY+      DP+ YR +V
Sbjct: 1191 AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYS-GTKLTDPTEYRGIV 1250

Query: 144  GSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFRKG-SFSL 203
            GSLQYL FTRPDI+++VNR+SQFMH PT  H  A+KRILRYL GTP  GI  +KG + SL
Sbjct: 1251 GSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSL 1310

Query: 204  QTFCDSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVDLY 263
              + D+DWAGD  D  ST+ +I +LG +PISWSSKKQ  V RSS E EY S+A T+ ++ 
Sbjct: 1311 HAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQ 1370

BLAST of Cmc04g0104791 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.5e-53
Identity = 113/242 (46.69%), Postives = 163/242 (67.36%), Query Frame = 0

Query: 24   ANPSLFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLK 83
            ++ SLF+   G S+ Y+L+YVDDI++ G D + +    + L+  F + +     YFLG++
Sbjct: 1114 SDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIE 1173

Query: 84   IQSSIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTS--LDLYTIAPPFNDPSLYRRLV 143
             +    G+ ++Q +Y +DLL  + M +AK   TPM+TS  L L++      DP+ YR +V
Sbjct: 1174 AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHS-GTKLPDPTEYRGIV 1233

Query: 144  GSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFRKG-SFSL 203
            GSLQYL FTRPD++++VNR+SQ+MH PT  H++A+KR+LRYL GTP  GI  +KG + SL
Sbjct: 1234 GSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSL 1293

Query: 204  QTFCDSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVDLY 263
              + D+DWAGDT D  ST+ +I +LG +PISWSSKKQ  V RSS E EY S+A T+ +L 
Sbjct: 1294 HAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQ 1353

BLAST of Cmc04g0104791 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 7.7e-53
Identity = 110/224 (49.11%), Postives = 149/224 (66.52%), Query Frame = 0

Query: 39  YLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKIQSSIGGISVNQAKY 98
           YLLLYVDDI++ G     + +L  QL+  F + DLGP  YFLG++I++   G+ ++Q KY
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKY 61

Query: 99  LIDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSV 158
              +L+ +GM   K   TP+   L+       + DPS +R +VG+LQYLT TRPDI+++V
Sbjct: 62  AEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 121

Query: 159 NRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGS-FSLQTFCDSDWAGDTSDRRS 218
           N V Q MH+PT+  F  +KR+LRY++GT   G+   K S  ++Q FCDSDWAG TS RRS
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 181

Query: 219 TSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVDLYW 262
           T+ F TFLG N ISWS+K+Q TVSRSS E EY +LA T  +L W
Sbjct: 182 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of Cmc04g0104791 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-29
Identity = 88/245 (35.92%), Postives = 133/245 (54.29%), Query Frame = 0

Query: 29   FIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKI--QS 88
            F R   ++   LLLYVDD++++G D   I  LK  L+  F + DLGP++  LG+KI  + 
Sbjct: 994  FKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRER 1053

Query: 89   SIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDL------YTIAPPFNDPSL-YRR 148
            +   + ++Q KY+  +L    M +AK   TP++  L L       T+    N   + Y  
Sbjct: 1054 TSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSS 1113

Query: 149  LVGSLQY-LTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSF 208
             VGSL Y +  TRPDIA +V  VS+F+  P   H+ AVK ILRYLRGT    + F     
Sbjct: 1114 AVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDP 1173

Query: 209  SLQTFCDSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVD 264
             L+ + D+D AGD  +R+S++ ++       ISW SK Q  V+ S+ E EY +   T  +
Sbjct: 1174 ILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKE 1233

BLAST of Cmc04g0104791 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-27
Identity = 78/237 (32.91%), Postives = 128/237 (54.01%), Query Frame = 0

Query: 28  LFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKI-QS 87
           L+ RS      Y+ +YVDD++V  P       +K +L   + + DLG    FLGL I QS
Sbjct: 72  LYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKVDKFLGLNIHQS 131

Query: 88  SIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDLY-TIAPPFNDPSLYRRLVGSLQ 147
           S G I+++   Y+      S + + K   TP+  S  L+ T +P   D + Y+ +VG L 
Sbjct: 132 SNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDITPYQSIVGQLL 191

Query: 148 YLTFT-RPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGS-FSLQTF 207
           +   T RPDI++ V+ +S+F+ +P  IH  + +R+LRYL  T ++ +K+R GS  +L  +
Sbjct: 192 FCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKYRSGSQLALTVY 251

Query: 208 CDSDWAGDTSDRRSTSDFITFLGPNPISWSSKK-QSTVSRSSIEVEYCSLATTTVDL 260
           CD+          ST  ++T L   P++WSSKK +  +   S E EY + + T +++
Sbjct: 252 CDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYITASETVMEI 308

BLAST of Cmc04g0104791 vs. ExPASy TrEMBL
Match: A0A5A7SGQ3 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1204G00120 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.8e-129
Identity = 238/239 (99.58%), Postives = 239/239 (100.00%), Query Frame = 0

Query: 25  NPSLFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKI 84
           NPSLFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKI
Sbjct: 166 NPSLFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKI 225

Query: 85  QSSIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSL 144
           QSSIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSL
Sbjct: 226 QSSIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSL 285

Query: 145 QYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFC 204
           QYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFR+GSFSLQTFC
Sbjct: 286 QYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFREGSFSLQTFC 345

Query: 205 DSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVDLYWIR 264
           DSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVDLYWIR
Sbjct: 346 DSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVDLYWIR 404

BLAST of Cmc04g0104791 vs. ExPASy TrEMBL
Match: A0A1S4E450 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107991867 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.8e-129
Identity = 238/239 (99.58%), Postives = 239/239 (100.00%), Query Frame = 0

Query: 25  NPSLFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKI 84
           NPSLFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKI
Sbjct: 166 NPSLFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKI 225

Query: 85  QSSIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSL 144
           QSSIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSL
Sbjct: 226 QSSIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSL 285

Query: 145 QYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFC 204
           QYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFR+GSFSLQTFC
Sbjct: 286 QYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFREGSFSLQTFC 345

Query: 205 DSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVDLYWIR 264
           DSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVDLYWIR
Sbjct: 346 DSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVDLYWIR 404

BLAST of Cmc04g0104791 vs. ExPASy TrEMBL
Match: A0A5D3DUH6 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1920G00270 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 4.9e-119
Identity = 236/319 (73.98%), Postives = 243/319 (76.18%), Query Frame = 0

Query: 3   FRIKYNPDGTIARHKARLVAK--------------------------------------- 62
           FRIKYNP+GTIARHK RLVAK                                       
Sbjct: 32  FRIKYNPNGTIARHKVRLVAKGYHQETVYMAQPTGFQDKTCPNHVCLLYKSLYGLKQAPR 91

Query: 63  -------------------ANPSLFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQL 122
                              A+PSLFIRSVGSSLTYLLLYV +IIV GPDYLYIFVLKNQL
Sbjct: 92  AWFERFRSYLFTLDFVASTADPSLFIRSVGSSLTYLLLYVGNIIVAGPDYLYIFVLKNQL 151

Query: 123 ALEFKISDLGPSKYFLGLKIQSSIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDL 182
           ALEFKISDLGP KYFLGL+IQSSI GI VNQAKYL DLLHTS MTSAK CITPMSTSLD 
Sbjct: 152 ALEFKISDLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSRMTSAKCCITPMSTSLDP 211

Query: 183 YTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLR 242
           YTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFS+NRVSQFMHKPTVIHFSAVKRILRYLR
Sbjct: 212 YTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSINRVSQFMHKPTVIHFSAVKRILRYLR 271

Query: 243 GTPTLGIKFRKGSFSLQTFCDSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSS 264
           GTPTLGIKFRKGSFSLQTFCDS+WAGDTSD+RSTS FI FLG NPISWSSKKQSTVSRSS
Sbjct: 272 GTPTLGIKFRKGSFSLQTFCDSEWAGDTSDQRSTSSFIAFLGSNPISWSSKKQSTVSRSS 331

BLAST of Cmc04g0104791 vs. ExPASy TrEMBL
Match: A0A5A7TPR4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001410 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.2e-117
Identity = 239/341 (70.09%), Postives = 243/341 (71.26%), Query Frame = 0

Query: 3   FRIKYNPDGTIARHKARLVAK--------------------------------------- 62
           FRIKYNPDGTIARHKARLVAK                                       
Sbjct: 222 FRIKYNPDGTIARHKARLVAKGYHQVQGFDFDETFSPVVKKPTIRIILALAAQYNWSLTQ 281

Query: 63  -----------------------------------------ANPSLFIRSVGSSLTYLLL 122
                                                    A+PSLFIRSVGS L+YLLL
Sbjct: 282 LDVKNDFFHGILQETVYMTQSTDFQDKTCPNHVCLLHKSLYADPSLFIRSVGSFLSYLLL 341

Query: 123 YVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKIQSSIGGISVNQAKYLIDL 182
           YVDDIIV G DYLYIFVLKNQLALEFKIS+LGP KYFLGL+IQSSI GI VNQAKYL DL
Sbjct: 342 YVDDIIVTGLDYLYIFVLKNQLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDL 401

Query: 183 LHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVS 242
           LHTSGMTSAKSCITPMSTSLDLYTIAPPFNDP LYRRLVGSLQYLTFTRPDIA SVNRVS
Sbjct: 402 LHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPLLYRRLVGSLQYLTFTRPDIALSVNRVS 461

Query: 243 QFMHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWAGDTSDRRSTSDFI 264
           QFMHKPTVIHFSAVKRILRYL GTPTLGIKFRKGSFSLQTFCDSDWA DTSDRRSTS FI
Sbjct: 462 QFMHKPTVIHFSAVKRILRYLCGTPTLGIKFRKGSFSLQTFCDSDWAADTSDRRSTSGFI 521

BLAST of Cmc04g0104791 vs. ExPASy TrEMBL
Match: A0A1S4E1E5 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107991416 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 2.2e-111
Identity = 222/292 (76.03%), Postives = 225/292 (77.05%), Query Frame = 0

Query: 3   FRIKYNPDGTIARHKARLVAK--------------------------------------- 62
           FRIKYNPDGTI RHKARLV K                                       
Sbjct: 32  FRIKYNPDGTIVRHKARLVVKGYHQVQGFDFDETFSPVVKKPTIHIILALAAQYNWSLTQ 91

Query: 63  ---------ANPSLFIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLG 122
                    A+PSLFIRSVGSSLTYLLLYVDDIIV  PDYLYI VLKNQLALEFKISDL 
Sbjct: 92  LDVKNAFLHADPSLFIRSVGSSLTYLLLYVDDIIVTEPDYLYISVLKNQLALEFKISDLD 151

Query: 123 PSKYFLGLKIQSSIGGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDP 182
           P KYFLGL+IQSSI GI VNQAKYL DLLHTSGMTS KSCITPMSTS DLYTIAPPFNDP
Sbjct: 152 PLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSVKSCITPMSTSFDLYTIAPPFNDP 211

Query: 183 SLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFR 242
           SLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPT+IHFSAVKRILRYLRGT T GIKFR
Sbjct: 212 SLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTIIHFSAVKRILRYLRGTLTFGIKFR 271

Query: 243 KGSFSLQTFCDSDWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSSIE 247
           KGSFSLQTFCDSDWAGDTSDRRSTS FI FL  NPISWSSKKQSTVSRSS E
Sbjct: 272 KGSFSLQTFCDSDWAGDTSDRRSTSSFIAFLDSNPISWSSKKQSTVSRSSTE 323

BLAST of Cmc04g0104791 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 208.8 bits (530), Expect = 5.5e-54
Identity = 110/224 (49.11%), Postives = 149/224 (66.52%), Query Frame = 0

Query: 39  YLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKIQSSIGGISVNQAKY 98
           YLLLYVDDI++ G     + +L  QL+  F + DLGP  YFLG++I++   G+ ++Q KY
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKY 61

Query: 99  LIDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSV 158
              +L+ +GM   K   TP+   L+       + DPS +R +VG+LQYLT TRPDI+++V
Sbjct: 62  AEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 121

Query: 159 NRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGS-FSLQTFCDSDWAGDTSDRRS 218
           N V Q MH+PT+  F  +KR+LRY++GT   G+   K S  ++Q FCDSDWAG TS RRS
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 181

Query: 219 TSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVDLYW 262
           T+ F TFLG N ISWS+K+Q TVSRSS E EY +LA T  +L W
Sbjct: 182 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of Cmc04g0104791 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-42
Identity = 97/236 (41.10%), Postives = 137/236 (58.05%), Query Frame = 0

Query: 29  FIRSVGSSLTYLLLYVDDIIVIGPDYLYIFVLKNQLALEFKISDLGPSKYFLGLKIQSSI 88
           F++   +    +L+YVDDII+   +   +  LK+QL   FK+ DLGP KYFLGL+I  S 
Sbjct: 269 FLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSA 328

Query: 89  GGISVNQAKYLIDLLHTSGMTSAKSCITPMSTSLDLYT-IAPPFNDPSLYRRLVGSLQYL 148
            GI++ Q KY +DLL  +G+   K    PM  S+         F D   YRRL+G L YL
Sbjct: 329 AGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYL 388

Query: 149 TFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKF-RKGSFSLQTFCDS 208
             TR DI+F+VN++SQF   P + H  AV +IL Y++GT   G+ +  +    LQ F D+
Sbjct: 389 QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDA 448

Query: 209 DWAGDTSDRRSTSDFITFLGPNPISWSSKKQSTVSRSSIEVEYCSLATTTVDLYWI 263
            +      RRST+ +  FLG + ISW SKKQ  VS+SS E EY +L+  T ++ W+
Sbjct: 449 SFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504

BLAST of Cmc04g0104791 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 65.1 bits (157), Expect = 9.7e-11
Identity = 33/81 (40.74%), Postives = 46/81 (56.79%), Query Frame = 0

Query: 146 YLTFTRPDIAFSVNRVSQFMHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGS-FSLQTFC 205
           YLT TRPD+ F+VNR+SQF          AV ++L Y++GT   G+ +   S   L+ F 
Sbjct: 2   YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61

Query: 206 DSDWAGDTSDRRSTSDFITFL 226
           DSDWA     RRS + F + +
Sbjct: 62  DSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016902755.13.7e-12999.58PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo] >... [more]
KAA0057165.11.0e-11873.98putative mitochondrial protein [Cucumis melo var. makuwa] >TYK27148.1 putative m... [more]
KAA0045362.12.5e-11770.09putative mitochondrial protein [Cucumis melo var. makuwa][more]
XP_016901810.14.6e-11176.03PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo][more]
TYK06402.12.5e-10187.22putative mitochondrial protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q94HW21.4e-5447.52Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT941.5e-5346.69Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P925197.7e-5349.11Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
P109782.0e-2935.92Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P256001.9e-2732.91Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
Match NameE-valueIdentityDescription
A0A5A7SGQ31.8e-12999.58Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A1S4E4501.8e-12999.58uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=... [more]
A0A5D3DUH64.9e-11973.98Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5A7TPR41.2e-11770.09Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A1S4E1E52.2e-11176.03uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=... [more]
Match NameE-valueIdentityDescription
ATMG00810.15.5e-5449.11DNA/RNA polymerases superfamily protein [more]
AT4G23160.11.3e-4241.10cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00240.19.7e-1140.74Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 26..118
e-value: 1.2E-16
score: 61.0
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 51..252
NoneNo IPR availablePANTHERPTHR11439:SF335SUBFAMILY NOT NAMEDcoord: 51..252
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 201..263
e-value: 5.09004E-30
score: 107.939
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 26..249

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0104791.1Cmc04g0104791.1mRNA