Cmc04g0104141 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTAACATTTCCTATGCTTCGACTGTTGGGAGCCTGATGTATGCAATGTTATGTACTAGACCTGACATTTGCTATTCAGTGGGGATAGTTAGTAGATATCAGTCCACTCCTAGACGTGATCATTGGAAAGTCGTTAAGAATATTCTAAAATATCTTAGAAGAAGAAAAGACTACATGCTCGTGTATGTTTCTAAGGATCTGATCCTTACTGGATACACTGACTCCGATTTTCAAACTGATAAAGATGTTAGAAAGTTTACATTAGGATCAGTTTTCACTCTGAACGGAGGAGCAGTGGTATGGAAAAGCATAAATAATCATGTATTGTTGACTCCACTATGGAAGCTGAATATGTAG ATGAGTAACATTTCCTATGCTTCGACTGTTGGGAGCCTGATGTATGCAATGTTATGTACTAGACCTGACATTTGCTATTCAGTGGGGATAGTTAGTAGATATCAGTCCACTCCTAGACGTGATCATTGGAAAGTCGTTAAGAATATTCTAAAATATCTTAGAAGAAGAAAAGACTACATGCTCGTGTATGTTTCTAAGGATCTGATCCTTACTGGATACACTGACTCCGATTTTCAAACTGATAAAGATGTTAGAAAGTTTACATTAGGATCAGTTTTCACTCTGAACGGAGGAGCAGTGGTATGGAAAAGCATAAATAATCATGTATTGTTGACTCCACTATGGAAGCTGAATATGTAG ATGAGTAACATTTCCTATGCTTCGACTGTTGGGAGCCTGATGTATGCAATGTTATGTACTAGACCTGACATTTGCTATTCAGTGGGGATAGTTAGTAGATATCAGTCCACTCCTAGACGTGATCATTGGAAAGTCGTTAAGAATATTCTAAAATATCTTAGAAGAAGAAAAGACTACATGCTCGTGTATGTTTCTAAGGATCTGATCCTTACTGGATACACTGACTCCGATTTTCAAACTGATAAAGATGTTAGAAAGTTTACATTAGGATCAGTTTTCACTCTGAACGGAGGAGCAGTGGTATGGAAAAGCATAAATAATCATGTATTGTTGACTCCACTATGGAAGCTGAATATGTAG MSNISYASTVGSLMYAMLCTRPDICYSVGIVSRYQSTPRRDHWKVVKNILKYLRRRKDYMLVYVSKDLILTGYTDSDFQTDKDVRKFTLGSVFTLNGGAVVWKSINNHVLLTPLWKLNM Homology
BLAST of Cmc04g0104141 vs. NCBI nr
Match: KAA0054839.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK27769.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 199.1 bits (505), Expect = 2.1e-47 Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of Cmc04g0104141 vs. NCBI nr
Match: KAA0033208.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK07508.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 195.3 bits (495), Expect = 3.0e-46 Identity = 97/119 (81.51%), Postives = 101/119 (84.87%), Query Frame = 0
BLAST of Cmc04g0104141 vs. NCBI nr
Match: KAA0046768.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 188.3 bits (477), Expect = 3.7e-44 Identity = 92/105 (87.62%), Postives = 94/105 (89.52%), Query Frame = 0
BLAST of Cmc04g0104141 vs. NCBI nr
Match: KAA0063746.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK14949.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 187.6 bits (475), Expect = 6.3e-44 Identity = 92/113 (81.42%), Postives = 95/113 (84.07%), Query Frame = 0
BLAST of Cmc04g0104141 vs. NCBI nr
Match: TYK14490.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43 Identity = 92/119 (77.31%), Postives = 98/119 (82.35%), Query Frame = 0
BLAST of Cmc04g0104141 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 5.8e-24 Identity = 53/104 (50.96%), Postives = 72/104 (69.23%), Query Frame = 0
BLAST of Cmc04g0104141 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 6.2e-18 Identity = 43/105 (40.95%), Postives = 67/105 (63.81%), Query Frame = 0
BLAST of Cmc04g0104141 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10 Identity = 38/97 (39.18%), Postives = 56/97 (57.73%), Query Frame = 0
BLAST of Cmc04g0104141 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 9.0e-09 Identity = 35/100 (35.00%), Postives = 51/100 (51.00%), Query Frame = 0
BLAST of Cmc04g0104141 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2) HSP 1 Score: 57.8 bits (138), Expect = 9.9e-08 Identity = 36/100 (36.00%), Postives = 48/100 (48.00%), Query Frame = 0
BLAST of Cmc04g0104141 vs. ExPASy TrEMBL
Match: A0A5D3DWF1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00340 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 1.0e-47 Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of Cmc04g0104141 vs. ExPASy TrEMBL
Match: A0A5A7SRP3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1702G00260 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.5e-46 Identity = 97/119 (81.51%), Postives = 101/119 (84.87%), Query Frame = 0
BLAST of Cmc04g0104141 vs. ExPASy TrEMBL
Match: A0A5A7TV73 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00520 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.8e-44 Identity = 92/105 (87.62%), Postives = 94/105 (89.52%), Query Frame = 0
BLAST of Cmc04g0104141 vs. ExPASy TrEMBL
Match: A0A5A7VBE3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold437G00140 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 3.1e-44 Identity = 92/113 (81.42%), Postives = 95/113 (84.07%), Query Frame = 0
BLAST of Cmc04g0104141 vs. ExPASy TrEMBL
Match: A0A5D3CST8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00010 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 5.2e-44 Identity = 92/119 (77.31%), Postives = 98/119 (82.35%), Query Frame = 0
BLAST of Cmc04g0104141 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 57.4 bits (137), Expect = 9.2e-09 Identity = 35/107 (32.71%), Postives = 56/107 (52.34%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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