Cmc04g0103891 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0103891
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr04: 21101417 .. 21102175 (-)
RNA-Seq Expression	Cmc04g0103891
Synteny	Cmc04g0103891

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATACCTTCTGTAGTAGTTTGTCTAGAGTTAGTTTACTGTCATCCTACTTTAGCACTTCTGAACAAGATTGTATGTTGTGGCATTTTCGACTGGGCCACCCAAATTTTACATATATGCAATATTTATTTCCCTACCTTTTTCCTAAACTTGATATCTCTTCTCTATCTTGTGATGTATGTATCCGGGTTAAACAACATCGGGTTGCTTTTCCCTCACAACCAATATAATCCTACACAAACATTGTTTACCCTCATCCATAGTGATGTTTGGGGTCCTTCCAAGGTCACCACCTCATTGGAAAAACGGTGGTTTGTAACTTTCATTGATGACCATACCCGTCTTACTTGGGTCTACCTTATCACAGATAAATTCGAGGTTTCATCCATTTTCCAAAACTTCTATCATACTATTGAAACACAATTCTATACAAAAATTGCAATTCTTCGAAGCCATAATGGTCGAGAATTCCAAAACCATAACCTTAATGAATTTCTAGCCTCCAAGGGGATTGTTCATCAAACCTCGTGTGCCTACACTCCTCAACAAAATGGAGTGACCGAACGAAAAAACCGTCACGTTGTGGAAGTAGCCCATTCCCTTATACTTTCCACTTCCCTTCCATTATACCTGTGGGGAGATGCTATTCTTACAGCCGCTCAGTTAATCAATAGAATGTCTTCTCGTATCCTCCACCTTCAGATTCCCTTATATTGTCTTAAGGAGTCTTACCCCTCTACTCGCCTTGTTTTTTAG

mRNA sequence

ATGATGATACCTTCTGTAGTAGTTTGTCTAGAGTTAGTTTACTGTCATCCTACTTTAGCACTTCTGAACAAGATTGTATGTTGTGGCATTTTCGACTGGGCCACCCAAATTTTACATATATGCAATATTTATTTCCCTACCTTTTTCCTAAACTTGATATCTCTTCTCTATCTTGTGATGTATGTATCCGGGTTAAACAACATCGGGTTGCTTTTCCCTCACAACCAATATAATCCTACACAAACATTGTTTACCCTCATCCATAGTGATGTTTGGGGTCCTTCCAAGGTCACCACCTCATTGGAAAAACGGTGGTTTGTAACTTTCATTGATGACCATACCCGTCTTACTTGGGTCTACCTTATCACAGATAAATTCGAGGTTTCATCCATTTTCCAAAACTTCTATCATACTATTGAAACACAATTCTATACAAAAATTGCAATTCTTCGAAGCCATAATGGTCGAGAATTCCAAAACCATAACCTTAATGAATTTCTAGCCTCCAAGGGGATTGTTCATCAAACCTCGTGTGCCTACACTCCTCAACAAAATGGAGTGACCGAACGAAAAAACCGTCACGTTGTGGAAGTAGCCCATTCCCTTATACTTTCCACTTCCCTTCCATTATACCTGTGGGGAGATGCTATTCTTACAGCCGCTCAGTTAATCAATAGAATGTCTTCTCGTATCCTCCACCTTCAGATTCCCTTATATTGTCTTAAGGAGTCTTACCCCTCTACTCGCCTTGTTTTTTAG

Coding sequence (CDS)

ATGATGATACCTTCTGTAGTAGTTTGTCTAGAGTTAGTTTACTGTCATCCTACTTTAGCACTTCTGAACAAGATTGTATGTTGTGGCATTTTCGACTGGGCCACCCAAATTTTACATATATGCAATATTTATTTCCCTACCTTTTTCCTAAACTTGATATCTCTTCTCTATCTTGTGATGTATGTATCCGGGTTAAACAACATCGGGTTGCTTTTCCCTCACAACCAATATAATCCTACACAAACATTGTTTACCCTCATCCATAGTGATGTTTGGGGTCCTTCCAAGGTCACCACCTCATTGGAAAAACGGTGGTTTGTAACTTTCATTGATGACCATACCCGTCTTACTTGGGTCTACCTTATCACAGATAAATTCGAGGTTTCATCCATTTTCCAAAACTTCTATCATACTATTGAAACACAATTCTATACAAAAATTGCAATTCTTCGAAGCCATAATGGTCGAGAATTCCAAAACCATAACCTTAATGAATTTCTAGCCTCCAAGGGGATTGTTCATCAAACCTCGTGTGCCTACACTCCTCAACAAAATGGAGTGACCGAACGAAAAAACCGTCACGTTGTGGAAGTAGCCCATTCCCTTATACTTTCCACTTCCCTTCCATTATACCTGTGGGGAGATGCTATTCTTACAGCCGCTCAGTTAATCAATAGAATGTCTTCTCGTATCCTCCACCTTCAGATTCCCTTATATTGTCTTAAGGAGTCTTACCCCTCTACTCGCCTTGTTTTTTAG

Protein sequence

MMIPSVVVCLELVYCHPTLALLNKIVCCGIFDWATQILHICNIYFPTFFLNLISLLYLVMYVSGLNNIGLLFPHNQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWVYLITDKFEVSSIFQNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCAYTPQQNGVTERKNRHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIPLYCLKESYPSTRLVF

Homology

[Close]

BLAST of Cmc04g0103891 vs. NCBI nr
Match: KAA0068166.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK21086.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 396.4 bits (1017), Expect = 1.9e-106
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 60  MYVSGLNNIGLLFPHNQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWV 119
           MYVSGLNNIGLLFPHNQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWV
Sbjct: 1   MYVSGLNNIGLLFPHNQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWV 60

Query: 120 YLITDKFEVSSIFQNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCA 179
           YLITDKFEVSSIFQNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCA
Sbjct: 61  YLITDKFEVSSIFQNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCA 120

Query: 180 YTPQQNGVTERKNRHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIPLY 239
           YTPQQNGVTERKNRHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIPLY
Sbjct: 121 YTPQQNGVTERKNRHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIPLY 180

Query: 240 CLKESYPSTRLVF 253
           CLKESYPSTRLVF
Sbjct: 181 CLKESYPSTRLVF 193

[Close]

BLAST of Cmc04g0103891 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 311.2 bits (796), Expect = 8.0e-81
Identity = 155/180 (86.11%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 72  FPHNQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWVYLITDKFEVSSI 131
           FP   Y PTQ  F LIHSDVWGPSKVTTS  KRWFVTFIDDHTRLTWVYLI+DK EV SI
Sbjct: 665 FPSQPYKPTQP-FNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLISDKSEVPSI 724

Query: 132 FQNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCAYTPQQNGVTERK 191
           FQNFYHTI+TQF+TKIAILRS NGREFQNHNL+EFLASKGIVHQTSCAYTPQQNGV ERK
Sbjct: 725 FQNFYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERK 784

Query: 192 NRHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIPLYCLKESYPSTRLV 251
           NRH+VEVA SL+LSTSLP YLWGDAILTAA LINRM SRILHLQ PL CLKESYPSTRLV
Sbjct: 785 NRHLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLV 843

[Close]

BLAST of Cmc04g0103891 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 311.2 bits (796), Expect = 8.0e-81
Identity = 155/180 (86.11%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 72  FPHNQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWVYLITDKFEVSSI 131
           FP   Y PTQ  F LIHSDVWGPSKVTTS  KRWFVTFIDDHTRLTWVYLI+DK EV SI
Sbjct: 639 FPSQPYKPTQP-FNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLISDKSEVPSI 698

Query: 132 FQNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCAYTPQQNGVTERK 191
           FQNFYHTI+TQF+TKIAILRS NGREFQNHNL+EFLASKGIVHQTSCAYTPQQNGV ERK
Sbjct: 699 FQNFYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERK 758

Query: 192 NRHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIPLYCLKESYPSTRLV 251
           NRH+VEVA SL+LSTSLP YLWGDAILTAA LINRM SRILHLQ PL CLKESYPSTRLV
Sbjct: 759 NRHLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLV 817

[Close]

BLAST of Cmc04g0103891 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 311.2 bits (796), Expect = 8.0e-81
Identity = 155/180 (86.11%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 72  FPHNQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWVYLITDKFEVSSI 131
           FP   Y PTQ  F LIHSDVWGPSKVTTS  KRWFVTFIDDHTRLTWVYLI+DK EV SI
Sbjct: 665 FPSQPYKPTQP-FNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLISDKSEVPSI 724

Query: 132 FQNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCAYTPQQNGVTERK 191
           FQNFYHTI+TQF+TKIAILRS NGREFQNHNL+EFLASKGIVHQTSCAYTPQQNGV ERK
Sbjct: 725 FQNFYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERK 784

Query: 192 NRHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIPLYCLKESYPSTRLV 251
           NRH+VEVA SL+LSTSLP YLWGDAILTAA LINRM SRILHLQ PL CLKESYPSTRLV
Sbjct: 785 NRHLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLV 843

[Close]

BLAST of Cmc04g0103891 vs. NCBI nr
Match: KAA0048203.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 311.2 bits (796), Expect = 8.0e-81
Identity = 155/180 (86.11%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 72  FPHNQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWVYLITDKFEVSSI 131
           FP   Y PTQ  F LIHSDVWGPSKVTTS  KRWFVTFIDDHTRLTWVYLI+DK EV SI
Sbjct: 665 FPSQPYKPTQP-FNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLISDKSEVPSI 724

Query: 132 FQNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCAYTPQQNGVTERK 191
           FQNFYHTI+TQF+TKIAILRS NGREFQNHNL+EFLASKGIVHQTSCAYTPQQNGV ERK
Sbjct: 725 FQNFYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERK 784

Query: 192 NRHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIPLYCLKESYPSTRLV 251
           NRH+VEVA SL+LSTSLP YLWGDAILTAA LINRM SRILHLQ PL CLKESYPSTRLV
Sbjct: 785 NRHLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLV 843

[Close]

BLAST of Cmc04g0103891 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-27
Identity = 63/155 (40.65%), Postives = 92/155 (59.35%), Query Frame = 0


Query: 83  LFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWVYLITDKFEVSSIFQNFYHTIETQ 142
           +  L++SDV GP ++ +    ++FVTFIDD +R  WVY++  K +V  +FQ F+  +E +
Sbjct: 480 ILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERE 539

Query: 143 FYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCAYTPQQNGVTERKNRHVVEVAHSL 202
              K+  LRS NG E+ +    E+ +S GI H+ +   TPQ NGV ER NR +VE   S+
Sbjct: 540 TGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSM 599

Query: 203 ILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIP 238
           +    LP   WG+A+ TA  LINR  S  L  +IP
Sbjct: 600 LRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIP 634

[Close]

BLAST of Cmc04g0103891 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 113.2 bits (282), Expect = 4.2e-24
Identity = 59/147 (40.14%), Postives = 84/147 (57.14%), Query Frame = 0


Query: 86  LIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWVYLITDKFEVSSIFQNFYHTIETQFYT 145
           ++HSDV GP    T  +K +FV F+D  T     YLI  K +V S+FQ+F    E  F  
Sbjct: 483 VVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNL 542

Query: 146 KIAILRSHNGREFQNHNLNEFLASKGIVHQTSCAYTPQQNGVTERKNRHVVEVAHSLILS 205
           K+  L   NGRE+ ++ + +F   KGI +  +  +TPQ NGV+ER  R + E A +++  
Sbjct: 543 KVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSG 602

Query: 206 TSLPLYLWGDAILTAAQLINRMSSRIL 233
             L    WG+A+LTA  LINR+ SR L
Sbjct: 603 AKLDKSFWGEAVLTATYLINRIPSRAL 629

[Close]

BLAST of Cmc04g0103891 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.6e-23
Identity = 65/176 (36.93%), Postives = 97/176 (55.11%), Query Frame = 0


Query: 72  FPHNQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWVYLITDKFEVSSI 131
           F  +  N T+ L   I+SDVW  S + +    R++V F+D  TR TW+Y +  K +V   
Sbjct: 513 FSQSTINSTRPL-EYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKET 572

Query: 132 FQNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCAYTPQQNGVTERK 191
           F  F + +E +F T+I    S NG EF    L E+ +  GI H TS  +TP+ NG++ERK
Sbjct: 573 FITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGISHLTSPPHTPEHNGLSERK 632

Query: 192 NRHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIPLYCLKESYPS 248
           +RH+VE   +L+   S+P   W  A   A  LINR+ + +L L+ P   L  + P+
Sbjct: 633 HRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPN 684

[Close]

BLAST of Cmc04g0103891 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.7e-23
Identity = 61/151 (40.40%), Postives = 89/151 (58.94%), Query Frame = 0


Query: 87  IHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWVYLITDKFEVSSIFQNFYHTIETQFYTK 146
           I+SDVW  S + +    R++V F+D  TR TW+Y +  K +V   F  F   +E +F T+
Sbjct: 506 IYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 565

Query: 147 IAILRSHNGREFQNHNLNEFLASKGIVHQTSCAYTPQQNGVTERKNRHVVEVAHSLILST 206
           I  L S NG EF    L ++L+  GI H TS  +TP+ NG++ERK+RH+VE+  +L+   
Sbjct: 566 IGTLYSDNGGEFV--VLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHA 625

Query: 207 SLPLYLWGDAILTAAQLINRMSSRILHLQIP 238
           S+P   W  A   A  LINR+ + +L LQ P
Sbjct: 626 SVPKTYWPYAFSVAVYLINRLPTPLLQLQSP 653

[Close]

BLAST of Cmc04g0103891 vs. ExPASy Swiss-Prot
Match: O13527 (Truncated transposon Ty1-A Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-A PE=3 SV=3)

HSP 1 Score: 80.1 bits (196), Expect = 3.9e-14
Identity = 44/157 (28.03%), Postives = 79/157 (50.32%), Query Frame = 0


Query: 75  NQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWVYLITDKFE--VSSIF 134
           N Y P    F  +H+D++GP          +F++F D+ T+L WVY + D+ E  +  +F
Sbjct: 101 NSYEP----FQYLHTDIFGPVHNLPKSAPSYFISFTDETTKLRWVYPLHDRREDSILDVF 160

Query: 135 QNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCAYTPQQNGVTERKN 194
                 I+ QF   + +++   G E+ N  L++FL   GI    +     + +GV ER N
Sbjct: 161 TTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLN 220

Query: 195 RHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSS 230
           R +++   + +  + LP +LW  AI  +  + N ++S
Sbjct: 221 RTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLAS 253

[Close]

BLAST of Cmc04g0103891 vs. ExPASy TrEMBL
Match: A0A5D3DC00 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00520 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 9.2e-107
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 60  MYVSGLNNIGLLFPHNQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWV 119
           MYVSGLNNIGLLFPHNQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWV
Sbjct: 1   MYVSGLNNIGLLFPHNQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWV 60

Query: 120 YLITDKFEVSSIFQNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCA 179
           YLITDKFEVSSIFQNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCA
Sbjct: 61  YLITDKFEVSSIFQNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCA 120

Query: 180 YTPQQNGVTERKNRHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIPLY 239
           YTPQQNGVTERKNRHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIPLY
Sbjct: 121 YTPQQNGVTERKNRHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIPLY 180

Query: 240 CLKESYPSTRLVF 253
           CLKESYPSTRLVF
Sbjct: 181 CLKESYPSTRLVF 193

[Close]

BLAST of Cmc04g0103891 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.9e-81
Identity = 155/180 (86.11%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 72  FPHNQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWVYLITDKFEVSSI 131
           FP   Y PTQ  F LIHSDVWGPSKVTTS  KRWFVTFIDDHTRLTWVYLI+DK EV SI
Sbjct: 665 FPSQPYKPTQP-FNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLISDKSEVPSI 724

Query: 132 FQNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCAYTPQQNGVTERK 191
           FQNFYHTI+TQF+TKIAILRS NGREFQNHNL+EFLASKGIVHQTSCAYTPQQNGV ERK
Sbjct: 725 FQNFYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERK 784

Query: 192 NRHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIPLYCLKESYPSTRLV 251
           NRH+VEVA SL+LSTSLP YLWGDAILTAA LINRM SRILHLQ PL CLKESYPSTRLV
Sbjct: 785 NRHLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLV 843

[Close]

BLAST of Cmc04g0103891 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.9e-81
Identity = 155/180 (86.11%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 72  FPHNQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWVYLITDKFEVSSI 131
           FP   Y PTQ  F LIHSDVWGPSKVTTS  KRWFVTFIDDHTRLTWVYLI+DK EV SI
Sbjct: 665 FPSQPYKPTQP-FNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLISDKSEVPSI 724

Query: 132 FQNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCAYTPQQNGVTERK 191
           FQNFYHTI+TQF+TKIAILRS NGREFQNHNL+EFLASKGIVHQTSCAYTPQQNGV ERK
Sbjct: 725 FQNFYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERK 784

Query: 192 NRHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIPLYCLKESYPSTRLV 251
           NRH+VEVA SL+LSTSLP YLWGDAILTAA LINRM SRILHLQ PL CLKESYPSTRLV
Sbjct: 785 NRHLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLV 843

[Close]

BLAST of Cmc04g0103891 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.9e-81
Identity = 155/180 (86.11%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 72  FPHNQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWVYLITDKFEVSSI 131
           FP   Y PTQ  F LIHSDVWGPSKVTTS  KRWFVTFIDDHTRLTWVYLI+DK EV SI
Sbjct: 665 FPSQPYKPTQP-FNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLISDKSEVPSI 724

Query: 132 FQNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCAYTPQQNGVTERK 191
           FQNFYHTI+TQF+TKIAILRS NGREFQNHNL+EFLASKGIVHQTSCAYTPQQNGV ERK
Sbjct: 725 FQNFYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERK 784

Query: 192 NRHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIPLYCLKESYPSTRLV 251
           NRH+VEVA SL+LSTSLP YLWGDAILTAA LINRM SRILHLQ PL CLKESYPSTRLV
Sbjct: 785 NRHLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLV 843

[Close]

BLAST of Cmc04g0103891 vs. ExPASy TrEMBL
Match: A0A5A7SM64 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00220 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.9e-81
Identity = 155/180 (86.11%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 72  FPHNQYNPTQTLFTLIHSDVWGPSKVTTSLEKRWFVTFIDDHTRLTWVYLITDKFEVSSI 131
           FP   Y PTQ  F LIHSDVWGPSKVTTS  KRWFVTFIDDHTRLTWVYLI+DK EV SI
Sbjct: 665 FPSQPYKPTQP-FNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTRLTWVYLISDKSEVPSI 724

Query: 132 FQNFYHTIETQFYTKIAILRSHNGREFQNHNLNEFLASKGIVHQTSCAYTPQQNGVTERK 191
           FQNFYHTI+TQF+TKIAILRS NGREFQNHNL+EFLASKGIVHQTSCAYTPQQNGV ERK
Sbjct: 725 FQNFYHTIKTQFHTKIAILRSDNGREFQNHNLSEFLASKGIVHQTSCAYTPQQNGVAERK 784

Query: 192 NRHVVEVAHSLILSTSLPLYLWGDAILTAAQLINRMSSRILHLQIPLYCLKESYPSTRLV 251
           NRH+VEVA SL+LSTSLP YLWGDAILTAA LINRM SRILHLQ PL CLKESYPSTRLV
Sbjct: 785 NRHLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMPSRILHLQTPLDCLKESYPSTRLV 843

The following BLAST results are available for this feature:

BLAST of Cmc04g0103891 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0068166.1	1.9e-106	100.00	Beta-galactosidase [Cucumis melo var. makuwa] >TYK21086.1 Beta-galactosidase [Cu...	[more]
TYJ99952.1	8.0e-81	86.11	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
KAA0031941.1	8.0e-81	86.11	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK08054.1	8.0e-81	86.11	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0048203.1	8.0e-81	86.11	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0103891 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.1e-27	40.65	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	4.2e-24	40.14	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	1.6e-23	36.93	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.7e-23	40.40	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
O13527	3.9e-14	28.03	Truncated transposon Ty1-A Gag-Pol polyprotein OS=Saccharomyces cerevisiae (stra...	[more]

BLAST of Cmc04g0103891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DC00	9.2e-107	100.00	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G0...	[more]
A0A5D3BJK7	3.9e-81	86.11	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	3.9e-81	86.11	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	3.9e-81	86.11	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]
A0A5A7SM64	3.9e-81	86.11	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G0...	[more]

BLAST of Cmc04g0103891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 75..251 e-value: 1.3E-32 score: 114.7
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 86..182 e-value: 2.3E-10 score: 40.7
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 75..245 score: 17.972221
None	No IPR available	PANTHER	PTHR11439:SF324	RIBONUCLEASE H-LIKE DOMAIN, GAG-PRE-INTEGRASE DOMAIN, GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATED	coord: 81..222
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 81..222
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 82..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0103891.1	Cmc04g0103891.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003676	nucleic acid binding