Cmc04g0103701 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0103701
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Integrase catalytic domain-containing protein
Location	CMiso1.1chr04: 20875303 .. 20876133 (+)
RNA-Seq Expression	Cmc04g0103701
Synteny	Cmc04g0103701

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGTAAAAACAACTTTTTTAAATGGTGACCTAGAAGAAGAAATTTATATGACACAACCAGAAGGCTTTAAAATCTCTGGGCAAGAAAACAAAGTGTGTAAACTGAGAAAATCCCTATACGGTCCTAAGCAAGCTCCCAAGCAGTGGTATGAAAAATTTAATAATACGTTGATAACCAATGGGTTTAAAATAAATTCCTCTGACACGTGTGTTTATTCAAAGGTGTTTGGAGCTGATTGCATATTAATATGTCTATATGTTGATGACATGTTAATCTTTGGAACAAACATGGAGTTAATAATTGACACTAAGTTATTTCTCTCGTCACACTTTGAAATGAAAGACCTAGAAGAAGCAGACGTAATCCTACGTGTTAAAATCAGGAAAAATAAAACTAGTTTGTCTCTTTGTCAATCTCACTACGTGGAGAAAATACTAAAGAAGTTTGATTCCTTTGATGTTTCTCCTGTGAGAACTCCCTTTGACGCTAGTAAACATCTTAATAAGAATAAAGGAGATAGTGTGTCTCAACTTGAATATGCAAAGATCATAGGTAGTGTGATGTATTTAATGAATTACACTAGACCGGATATTGCATATGCTGTCAGTAGATTAAGTAGATATACACATAATCCTGATAGAAACCACTGGGATGCCTTACGCCATCTATTGAGATATCTTAAAGGGACAATAGATTACTGTTTACACTTCAACAAATTTCCTGCCGTATTAGAAGGATATCGTGATGCTAACTGGGTCACAGATAATGATGAGGTTAACTCTACTAGTGGGTATGTATTTTTGCTCGGAGGTGGAGCAATATCTTGA

mRNA sequence

ATGGACGTAAAAACAACTTTTTTAAATGGTGACCTAGAAGAAGAAATTTATATGACACAACCAGAAGGCTTTAAAATCTCTGGGCAAGAAAACAAAGTGTGTAAACTGAGAAAATCCCTATACGGTCCTAAGCAAGCTCCCAAGCAGTGGTATGAAAAATTTAATAATACGTTGATAACCAATGGGTTTAAAATAAATTCCTCTGACACGTGTGTTTATTCAAAGGTGTTTGGAGCTGATTGCATATTAATATGTCTATATGTTGATGACATGTTAATCTTTGGAACAAACATGGAGTTAATAATTGACACTAAGTTATTTCTCTCGTCACACTTTGAAATGAAAGACCTAGAAGAAGCAGACGTAATCCTACGTGTTAAAATCAGGAAAAATAAAACTAGTTTGTCTCTTTGTCAATCTCACTACGTGGAGAAAATACTAAAGAAGTTTGATTCCTTTGATGTTTCTCCTGTGAGAACTCCCTTTGACGCTAGTAAACATCTTAATAAGAATAAAGGAGATAGTGTGTCTCAACTTGAATATGCAAAGATCATAGGTAGTGTGATGTATTTAATGAATTACACTAGACCGGATATTGCATATGCTGTCAGTAGATTAAGTAGATATACACATAATCCTGATAGAAACCACTGGGATGCCTTACGCCATCTATTGAGATATCTTAAAGGGACAATAGATTACTGTTTACACTTCAACAAATTTCCTGCCGTATTAGAAGGATATCGTGATGCTAACTGGGTCACAGATAATGATGAGGTTAACTCTACTAGTGGGTATGTATTTTTGCTCGGAGGTGGAGCAATATCTTGA

Coding sequence (CDS)

ATGGACGTAAAAACAACTTTTTTAAATGGTGACCTAGAAGAAGAAATTTATATGACACAACCAGAAGGCTTTAAAATCTCTGGGCAAGAAAACAAAGTGTGTAAACTGAGAAAATCCCTATACGGTCCTAAGCAAGCTCCCAAGCAGTGGTATGAAAAATTTAATAATACGTTGATAACCAATGGGTTTAAAATAAATTCCTCTGACACGTGTGTTTATTCAAAGGTGTTTGGAGCTGATTGCATATTAATATGTCTATATGTTGATGACATGTTAATCTTTGGAACAAACATGGAGTTAATAATTGACACTAAGTTATTTCTCTCGTCACACTTTGAAATGAAAGACCTAGAAGAAGCAGACGTAATCCTACGTGTTAAAATCAGGAAAAATAAAACTAGTTTGTCTCTTTGTCAATCTCACTACGTGGAGAAAATACTAAAGAAGTTTGATTCCTTTGATGTTTCTCCTGTGAGAACTCCCTTTGACGCTAGTAAACATCTTAATAAGAATAAAGGAGATAGTGTGTCTCAACTTGAATATGCAAAGATCATAGGTAGTGTGATGTATTTAATGAATTACACTAGACCGGATATTGCATATGCTGTCAGTAGATTAAGTAGATATACACATAATCCTGATAGAAACCACTGGGATGCCTTACGCCATCTATTGAGATATCTTAAAGGGACAATAGATTACTGTTTACACTTCAACAAATTTCCTGCCGTATTAGAAGGATATCGTGATGCTAACTGGGTCACAGATAATGATGAGGTTAACTCTACTAGTGGGTATGTATTTTTGCTCGGAGGTGGAGCAATATCTTGA

Protein sequence

MDVKTTFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGPKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLEEADVILRVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNKNKGDSVSQLEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHFNKFPAVLEGYRDANWVTDNDEVNSTSGYVFLLGGGAIS

Homology

[Close]

BLAST of Cmc04g0103701 vs. NCBI nr
Match: TYK06518.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 530.8 bits (1366), Expect = 7.1e-147
Identity = 261/276 (94.57%), Postives = 264/276 (95.65%), Query Frame = 0


Query: 1    MDVKTTFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGPKQAPKQWYEKFNNTLIT 60
            MDVKT FLNG+LEEEIYMTQPEGFKISGQENKVCKLRKSLYG KQAPKQWYEKFNNTLIT
Sbjct: 944  MDVKTAFLNGNLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLIT 1003

Query: 61   NGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLEEA 120
            NGFKINSSDTCVYSK+ GADCILICLYVDDMLIFGTNMELI DTK FLSSHFEMKDL EA
Sbjct: 1004 NGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEA 1063

Query: 121  DVILRVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNKNKGDSVSQLE 180
            DVIL VKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHL KNKGDSVSQ E
Sbjct: 1064 DVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPE 1123

Query: 181  YAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHFNK 240
            YAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNP+R HWDALRHLLRYLKGTIDYCLHF K
Sbjct: 1124 YAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKK 1183

Query: 241  FPAVLEGYRDANWVTDNDEVNSTSGYVFLLGGGAIS 277
            FPAVLEGY DANWVTDNDEVNSTSGYVFLLGGGAIS
Sbjct: 1184 FPAVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAIS 1219

[Close]

BLAST of Cmc04g0103701 vs. NCBI nr
Match: KAD6453934.1 (hypothetical protein E3N88_08640 [Mikania micrantha])

HSP 1 Score: 411.8 bits (1057), Expect = 4.8e-111
Identity = 197/276 (71.38%), Postives = 232/276 (84.06%), Query Frame = 0


Query: 1   MDVKTTFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGPKQAPKQWYEKFNNTLIT 60
           MDVKT FLNGDL+EEIYM QPEGF +SG E+KVCKLRKSLYG KQAPK+WYEKF+ TL  
Sbjct: 295 MDVKTAFLNGDLDEEIYMLQPEGFVVSGLESKVCKLRKSLYGLKQAPKKWYEKFDRTLKQ 354

Query: 61  NGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLEEA 120
           +G+ +N+SD+CVYSK      +LICLYVDDMLIFG +M  I  TK FLSS FEMKDL EA
Sbjct: 355 DGYIVNNSDSCVYSKRSKTGYVLICLYVDDMLIFGADMHDINQTKAFLSSKFEMKDLGEA 414

Query: 121 DVILRVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNKNKGDSVSQLE 180
           DVIL VKI++    +SLCQSHY+E++LKKFD F+++PV+TP+D S  L KN  +SVSQ E
Sbjct: 415 DVILGVKIKRTWNGISLCQSHYIEQMLKKFDCFELNPVKTPYDPSILLKKNNHESVSQSE 474

Query: 181 YAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHFNK 240
           YAKIIGSVM+LMNYTRPDIAY VSRLSRYTHNP + HW A+  L+RYL+GT++ CLH+NK
Sbjct: 475 YAKIIGSVMFLMNYTRPDIAYTVSRLSRYTHNPSKEHWSAIHRLMRYLRGTMELCLHYNK 534

Query: 241 FPAVLEGYRDANWVTDNDEVNSTSGYVFLLGGGAIS 277
           FPAVLEGY DANWVTDNDEV+STSGYVF++GGGAIS
Sbjct: 535 FPAVLEGYCDANWVTDNDEVSSTSGYVFIMGGGAIS 570

[Close]

BLAST of Cmc04g0103701 vs. NCBI nr
Match: KAE8670806.1 (hypothetical protein F3Y22_tig00112079pilonHSYRG00011 [Hibiscus syriacus])

HSP 1 Score: 394.8 bits (1013), Expect = 6.0e-106
Identity = 191/276 (69.20%), Postives = 224/276 (81.16%), Query Frame = 0


Query: 1    MDVKTTFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGPKQAPKQWYEKFNNTLIT 60
            MDVKT FLNGDL+EEIYM QP GF+  G E KV +L+KSLYG KQAPKQWYEKF+ T+++
Sbjct: 767  MDVKTAFLNGDLDEEIYMEQPLGFEAPGMEGKVYRLKKSLYGLKQAPKQWYEKFHKTILS 826

Query: 61   NGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLEEA 120
             GF +N SD CVYSK+F  +C++I LYVDDMLIF +N+E I   K FLS+ FEM  L E 
Sbjct: 827  FGFVVNGSDACVYSKMFDTECVIISLYVDDMLIFSSNIESINKVKNFLSTKFEMTYLGEV 886

Query: 121  DVILRVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNKNKGDSVSQLE 180
            DVIL V++ K +   SLCQ+HY++K+LKKFDSFDV PVRTP+D S HL KNKG SVSQ E
Sbjct: 887  DVILGVEVTKTEKGFSLCQAHYIDKVLKKFDSFDVVPVRTPYDPSIHLVKNKGSSVSQTE 946

Query: 181  YAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHFNK 240
            YAK+IGS+M+LMNYTRPDIAYAVSRLSRYTHNP   HW AL+ LL+YLKGT+D+ L F  
Sbjct: 947  YAKLIGSLMFLMNYTRPDIAYAVSRLSRYTHNPSGEHWIALKRLLKYLKGTLDWKLEFAG 1006

Query: 241  FPAVLEGYRDANWVTDNDEVNSTSGYVFLLGGGAIS 277
            FPAVLEGY DANWV+DNDEV+STSGYVF LGG AIS
Sbjct: 1007 FPAVLEGYCDANWVSDNDEVSSTSGYVFTLGGAAIS 1042

[Close]

BLAST of Cmc04g0103701 vs. NCBI nr
Match: KAG7571733.1 (Integrase catalytic core [Arabidopsis suecica])

HSP 1 Score: 387.1 bits (993), Expect = 1.3e-103
Identity = 189/276 (68.48%), Postives = 222/276 (80.43%), Query Frame = 0


Query: 1    MDVKTTFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGPKQAPKQWYEKFNNTLIT 60
            MDVKT FLNGDL EEIYM QPEGF I GQENKVCKL KSLYG KQAPKQW+EKF+NTL+ 
Sbjct: 885  MDVKTAFLNGDLHEEIYMMQPEGFIIEGQENKVCKLIKSLYGLKQAPKQWFEKFSNTLLE 944

Query: 61   NGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLEEA 120
            NGF  N  DTCV+SKV     ++ICLYVDDMLI GT++E++ DTK+FLSS F+MKDL EA
Sbjct: 945  NGFVSNEGDTCVFSKVHEHGYVIICLYVDDMLILGTSLEIVCDTKVFLSSKFDMKDLGEA 1004

Query: 121  DVILRVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNKNKGDSVSQLE 180
            DVIL +K+ K  +  SL QSHY+EKILKKF  +D    ++P+D+S HL +N+G+SV+Q E
Sbjct: 1005 DVILGIKVVKTDSGFSLNQSHYIEKILKKFGYWDEPSAKSPYDSSLHLCQNRGESVNQSE 1064

Query: 181  YAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHFNK 240
            YAK+IGSVMYLMN TRPDIAYAVSRLSRYTHNP  NHW AL  L+RYLKGTID+ L ++ 
Sbjct: 1065 YAKVIGSVMYLMNCTRPDIAYAVSRLSRYTHNPGSNHWSALNRLMRYLKGTIDWNLCYSG 1124

Query: 241  FPAVLEGYRDANWVTDNDEVNSTSGYVFLLGGGAIS 277
               VLE Y DANW +DNDEVNSTSG+VF L GGAI+
Sbjct: 1125 TSCVLEAYCDANWSSDNDEVNSTSGFVFTLAGGAIA 1160

[Close]

BLAST of Cmc04g0103701 vs. NCBI nr
Match: KAG7551885.1 (Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa])

HSP 1 Score: 385.6 bits (989), Expect = 3.7e-103
Identity = 188/276 (68.12%), Postives = 221/276 (80.07%), Query Frame = 0


Query: 1    MDVKTTFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGPKQAPKQWYEKFNNTLIT 60
            MDVKT FLNGDL EEIYM QPEGF I GQENKVCKL KSLYG KQAPKQW+EKF+NTL+ 
Sbjct: 916  MDVKTAFLNGDLHEEIYMMQPEGFIIEGQENKVCKLIKSLYGLKQAPKQWFEKFSNTLLE 975

Query: 61   NGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLEEA 120
            NGF  N  DTCV+SKV     ++ICLYVDDMLI GT++E++ DTK+FLSS F+MKDL EA
Sbjct: 976  NGFVSNEGDTCVFSKVHEHGYVIICLYVDDMLILGTSLEIVCDTKVFLSSKFDMKDLGEA 1035

Query: 121  DVILRVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNKNKGDSVSQLE 180
            DVIL +K+ K  +  SL QSHY+EKILKKF  +D    ++P+D+S HL +N+G+SV+Q E
Sbjct: 1036 DVILGIKVVKTDSGFSLNQSHYIEKILKKFGYWDEPSAKSPYDSSLHLCQNRGESVNQSE 1095

Query: 181  YAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHFNK 240
            YAK+IGSVMYLMN TRPDIAY VSRLSRYTHNP  NHW AL  L+RYLKGTID+ L ++ 
Sbjct: 1096 YAKVIGSVMYLMNCTRPDIAYVVSRLSRYTHNPGSNHWSALNRLMRYLKGTIDWNLCYSG 1155

Query: 241  FPAVLEGYRDANWVTDNDEVNSTSGYVFLLGGGAIS 277
               VLE Y DANW +DNDEVNSTSG+VF L GGAI+
Sbjct: 1156 TSCVLEAYCDANWSSDNDEVNSTSGFVFTLAGGAIA 1191

[Close]

BLAST of Cmc04g0103701 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.5e-64
Identity = 132/286 (46.15%), Postives = 186/286 (65.03%), Query Frame = 0


Query: 1    MDVKTTFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGPKQAPKQWYEKFNNTLIT 60
            +DVKT FL+GDLEEEIYM QPEGF+++G+++ VCKL KSLYG KQAP+QWY KF++ + +
Sbjct: 921  LDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKS 980

Query: 61   NGFKINSSDTCVYSKVFGA-DCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLEE 120
              +    SD CVY K F   + I++ LYVDDMLI G +  LI   K  LS  F+MKDL  
Sbjct: 981  QTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGP 1040

Query: 121  ADVILRVKIRKNKTS--LSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNK------- 180
            A  IL +KI + +TS  L L Q  Y+E++L++F+  +  PV TP      L+K       
Sbjct: 1041 AQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTV 1100

Query: 181  NKGDSVSQLEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKG 240
             +  +++++ Y+  +GS+MY M  TRPDIA+AV  +SR+  NP + HW+A++ +LRYL+G
Sbjct: 1101 EEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRG 1160

Query: 241  TIDYCLHFNKFPAVLEGYRDANWVTDNDEVNSTSGYVFLLGGGAIS 277
            T   CL F     +L+GY DA+   D D   S++GY+F   GGAIS
Sbjct: 1161 TTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAIS 1206

[Close]

BLAST of Cmc04g0103701 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.3e-50
Identity = 112/278 (40.29%), Postives = 161/278 (57.91%), Query Frame = 0


Query: 1    MDVKTTFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGPKQAPKQWYEKFNNTLIT 60
            +DV   FL G L +++YM+QP GF    + N VCKLRK+LYG KQAP+ WY +  N L+T
Sbjct: 1064 LDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLT 1123

Query: 61   NGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLEEA 120
             GF  + SDT ++    G   + + +YVDD+LI G +  L+ +T   LS  F +KD EE 
Sbjct: 1124 IGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEEL 1183

Query: 121  DVILRVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNKNKGDSVSQ-L 180
               L ++ ++  T L L Q  Y+  +L + +     PV TP   S  L+   G  ++   
Sbjct: 1184 HYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPT 1243

Query: 181  EYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHFN 240
            EY  I+GS+ YL  +TRPDI+YAV+RLS++ H P   H  AL+ +LRYL GT ++ +   
Sbjct: 1244 EYRGIVGSLQYLA-FTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLK 1303

Query: 241  KFPAV-LEGYRDANWVTDNDEVNSTSGYVFLLGGGAIS 277
            K   + L  Y DA+W  D D+  ST+GY+  LG   IS
Sbjct: 1304 KGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPIS 1340

[Close]

BLAST of Cmc04g0103701 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-49
Identity = 109/278 (39.21%), Postives = 159/278 (57.19%), Query Frame = 0


Query: 1    MDVKTTFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGPKQAPKQWYEKFNNTLIT 60
            +DV   FL G L +E+YM+QP GF    + + VC+LRK++YG KQAP+ WY +    L+T
Sbjct: 1047 LDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLT 1106

Query: 61   NGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLEEA 120
             GF  + SDT ++    G   I + +YVDD+LI G +  L+  T   LS  F +K+ E+ 
Sbjct: 1107 VGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDL 1166

Query: 121  DVILRVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNKNKGDSV-SQL 180
               L ++ ++    L L Q  Y   +L + +     PV TP   S  L  + G  +    
Sbjct: 1167 HYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPT 1226

Query: 181  EYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHFN 240
            EY  I+GS+ YL  +TRPD++YAV+RLS+Y H P  +HW+AL+ +LRYL GT D+ +   
Sbjct: 1227 EYRGIVGSLQYLA-FTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLK 1286

Query: 241  KFPAV-LEGYRDANWVTDNDEVNSTSGYVFLLGGGAIS 277
            K   + L  Y DA+W  D D+  ST+GY+  LG   IS
Sbjct: 1287 KGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPIS 1323

[Close]

BLAST of Cmc04g0103701 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 179.5 bits (454), Expect = 5.2e-44
Identity = 108/273 (39.56%), Postives = 151/273 (55.31%), Query Frame = 0


Query: 1    MDVKTTFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGPKQAPKQWYEKFNNTLIT 60
            MDVKT FLNG L+EEIYM  P+G  IS   + VCKL K++YG KQA + W+E F   L  
Sbjct: 1001 MDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKE 1060

Query: 61   NGFKINSSDTCVYSKVFG--ADCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLE 120
              F  +S D C+Y    G   + I + LYVDD++I   +M  + + K +L   F M DL 
Sbjct: 1061 CEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLN 1120

Query: 121  EADVILRVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNKNKGDSVSQ 180
            E    + ++I   +  + L QS YV+KIL KF+  + + V TP  +  +      D    
Sbjct: 1121 EIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCN 1180

Query: 181  LEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHF 240
                 +IG +MY+M  TRPD+  AV+ LSRY+   +   W  L+ +LRYLKGTID  L F
Sbjct: 1181 TPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF 1240

Query: 241  NK---FPAVLEGYRDANWVTDNDEVNSTSGYVF 269
             K   F   + GY D++W     +  ST+GY+F
Sbjct: 1241 KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLF 1271

[Close]

BLAST of Cmc04g0103701 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 3.5e-32
Identity = 92/279 (32.97%), Postives = 138/279 (49.46%), Query Frame = 0


Query: 1   MDVKTTFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGPKQAPKQWYEKFNNTLIT 60
           MDV T FLN  ++E IY+ QP GF      + V +L   +YG KQAP  W E  NNTL  
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 61  NGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLEEA 120
            GF  +  +  +Y +      I I +YVDD+L+   + ++    K  L+  + MKDL + 
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 121 DVILRVKIRKNKT-SLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNKNKGDSVSQL 180
           D  L + I ++    ++L    Y+ K   + +       +TP   SK L +     +  +
Sbjct: 121 DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 181 -EYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHF 240
             Y  I+G +++  N  RPDI+Y VS LSR+   P   H ++ R +LRYL  T   CL +
Sbjct: 181 TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240

Query: 241 NK-FPAVLEGYRDANWVTDNDEVNSTSGYVFLLGGGAIS 277
                  L  Y DA+    +D  +ST GYV LL G  ++
Sbjct: 241 RSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVT 279

[Close]

BLAST of Cmc04g0103701 vs. ExPASy TrEMBL
Match: A0A5D3C5T2 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00500 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 3.4e-147
Identity = 261/276 (94.57%), Postives = 264/276 (95.65%), Query Frame = 0


Query: 1    MDVKTTFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGPKQAPKQWYEKFNNTLIT 60
            MDVKT FLNG+LEEEIYMTQPEGFKISGQENKVCKLRKSLYG KQAPKQWYEKFNNTLIT
Sbjct: 944  MDVKTAFLNGNLEEEIYMTQPEGFKISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLIT 1003

Query: 61   NGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLEEA 120
            NGFKINSSDTCVYSK+ GADCILICLYVDDMLIFGTNMELI DTK FLSSHFEMKDL EA
Sbjct: 1004 NGFKINSSDTCVYSKMVGADCILICLYVDDMLIFGTNMELITDTKYFLSSHFEMKDLGEA 1063

Query: 121  DVILRVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNKNKGDSVSQLE 180
            DVIL VKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHL KNKGDSVSQ E
Sbjct: 1064 DVILGVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDSVSQPE 1123

Query: 181  YAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHFNK 240
            YAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNP+R HWDALRHLLRYLKGTIDYCLHF K
Sbjct: 1124 YAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFKK 1183

Query: 241  FPAVLEGYRDANWVTDNDEVNSTSGYVFLLGGGAIS 277
            FPAVLEGY DANWVTDNDEVNSTSGYVFLLGGGAIS
Sbjct: 1184 FPAVLEGYCDANWVTDNDEVNSTSGYVFLLGGGAIS 1219

[Close]

BLAST of Cmc04g0103701 vs. ExPASy TrEMBL
Match: A0A5N6PGV2 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_08640 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 2.3e-111
Identity = 197/276 (71.38%), Postives = 232/276 (84.06%), Query Frame = 0


Query: 1   MDVKTTFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGPKQAPKQWYEKFNNTLIT 60
           MDVKT FLNGDL+EEIYM QPEGF +SG E+KVCKLRKSLYG KQAPK+WYEKF+ TL  
Sbjct: 295 MDVKTAFLNGDLDEEIYMLQPEGFVVSGLESKVCKLRKSLYGLKQAPKKWYEKFDRTLKQ 354

Query: 61  NGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLEEA 120
           +G+ +N+SD+CVYSK      +LICLYVDDMLIFG +M  I  TK FLSS FEMKDL EA
Sbjct: 355 DGYIVNNSDSCVYSKRSKTGYVLICLYVDDMLIFGADMHDINQTKAFLSSKFEMKDLGEA 414

Query: 121 DVILRVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNKNKGDSVSQLE 180
           DVIL VKI++    +SLCQSHY+E++LKKFD F+++PV+TP+D S  L KN  +SVSQ E
Sbjct: 415 DVILGVKIKRTWNGISLCQSHYIEQMLKKFDCFELNPVKTPYDPSILLKKNNHESVSQSE 474

Query: 181 YAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHFNK 240
           YAKIIGSVM+LMNYTRPDIAY VSRLSRYTHNP + HW A+  L+RYL+GT++ CLH+NK
Sbjct: 475 YAKIIGSVMFLMNYTRPDIAYTVSRLSRYTHNPSKEHWSAIHRLMRYLRGTMELCLHYNK 534

Query: 241 FPAVLEGYRDANWVTDNDEVNSTSGYVFLLGGGAIS 277
           FPAVLEGY DANWVTDNDEV+STSGYVF++GGGAIS
Sbjct: 535 FPAVLEGYCDANWVTDNDEVSSTSGYVFIMGGGAIS 570

[Close]

BLAST of Cmc04g0103701 vs. ExPASy TrEMBL
Match: A0A2N9EQT1 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4851 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.8e-109
Identity = 194/276 (70.29%), Postives = 227/276 (82.25%), Query Frame = 0


Query: 1   MDVKTTFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGPKQAPKQWYEKFNNTLIT 60
           MDVKT FLNGDL+EEIYM QPEGF + GQENKVCKLRKSLYG KQAPKQW+EKF+ TL++
Sbjct: 383 MDVKTAFLNGDLDEEIYMDQPEGFVVQGQENKVCKLRKSLYGLKQAPKQWHEKFDKTLVS 442

Query: 61  NGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLEEA 120
           NGF +N SD CVYSK  GA  ++ICLYVDDMLIFGT+M  + +TK FLSS+F+MKDL EA
Sbjct: 443 NGFAVNESDRCVYSKFSGASGVIICLYVDDMLIFGTDMNAVKNTKDFLSSNFDMKDLGEA 502

Query: 121 DVILRVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNKNKGDSVSQLE 180
           D+IL ++I +N   L+L QSHY+EK+LKKF+ +D  PVRTP+D S HL KN G  VSQ E
Sbjct: 503 DLILGIRIIRNNEGLTLSQSHYIEKVLKKFNHYDYEPVRTPYDPSIHLKKNSGSPVSQSE 562

Query: 181 YAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHFNK 240
           YAKIIGSVM+LMN TRPDIAYAVSRLSRYTHNP   HW+A+  LL+YLKGT++  L +  
Sbjct: 563 YAKIIGSVMFLMNCTRPDIAYAVSRLSRYTHNPAHEHWNAITRLLKYLKGTMNLGLTYTG 622

Query: 241 FPAVLEGYRDANWVTDNDEVNSTSGYVFLLGGGAIS 277
            PAVLEGY DANW++DNDE NSTSGYVF LGGGAIS
Sbjct: 623 HPAVLEGYCDANWISDNDETNSTSGYVFTLGGGAIS 658

[Close]

BLAST of Cmc04g0103701 vs. ExPASy TrEMBL
Match: A0A2N9H4B0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37208 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.8e-109
Identity = 194/276 (70.29%), Postives = 227/276 (82.25%), Query Frame = 0


Query: 1    MDVKTTFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGPKQAPKQWYEKFNNTLIT 60
            MDVKT FLNGDL+EEIYM QPEGF + GQENKVCKLRKSLYG KQAPKQW+EKF+ TL++
Sbjct: 893  MDVKTAFLNGDLDEEIYMDQPEGFVVQGQENKVCKLRKSLYGLKQAPKQWHEKFDKTLVS 952

Query: 61   NGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLEEA 120
            NGF +N SD CVYSK  GA  ++ICLYVDDMLIFGT+M  + +TK FLSS+F+MKDL EA
Sbjct: 953  NGFAVNESDRCVYSKFSGASGVIICLYVDDMLIFGTDMNAVKNTKDFLSSNFDMKDLGEA 1012

Query: 121  DVILRVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNKNKGDSVSQLE 180
            D+IL ++I +N   L+L QSHY+EK+LKKF+ +D  PVRTP+D S HL KN G  VSQ E
Sbjct: 1013 DLILGIRIIRNNEGLTLSQSHYIEKVLKKFNHYDYEPVRTPYDPSIHLKKNSGSPVSQSE 1072

Query: 181  YAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHFNK 240
            YAKIIGSVM+LMN TRPDIAYAVSRLSRYTHNP   HW+A+  LL+YLKGT++  L +  
Sbjct: 1073 YAKIIGSVMFLMNCTRPDIAYAVSRLSRYTHNPAHEHWNAITRLLKYLKGTMNLGLTYTG 1132

Query: 241  FPAVLEGYRDANWVTDNDEVNSTSGYVFLLGGGAIS 277
             PAVLEGY DANW++DNDE NSTSGYVF LGGGAIS
Sbjct: 1133 HPAVLEGYCDANWISDNDETNSTSGYVFTLGGGAIS 1168

[Close]

BLAST of Cmc04g0103701 vs. ExPASy TrEMBL
Match: A0A6A2Y4J7 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112079pilonHSYRG00011 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.9e-106
Identity = 191/276 (69.20%), Postives = 224/276 (81.16%), Query Frame = 0


Query: 1    MDVKTTFLNGDLEEEIYMTQPEGFKISGQENKVCKLRKSLYGPKQAPKQWYEKFNNTLIT 60
            MDVKT FLNGDL+EEIYM QP GF+  G E KV +L+KSLYG KQAPKQWYEKF+ T+++
Sbjct: 767  MDVKTAFLNGDLDEEIYMEQPLGFEAPGMEGKVYRLKKSLYGLKQAPKQWYEKFHKTILS 826

Query: 61   NGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLEEA 120
             GF +N SD CVYSK+F  +C++I LYVDDMLIF +N+E I   K FLS+ FEM  L E 
Sbjct: 827  FGFVVNGSDACVYSKMFDTECVIISLYVDDMLIFSSNIESINKVKNFLSTKFEMTYLGEV 886

Query: 121  DVILRVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNKNKGDSVSQLE 180
            DVIL V++ K +   SLCQ+HY++K+LKKFDSFDV PVRTP+D S HL KNKG SVSQ E
Sbjct: 887  DVILGVEVTKTEKGFSLCQAHYIDKVLKKFDSFDVVPVRTPYDPSIHLVKNKGSSVSQTE 946

Query: 181  YAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHFNK 240
            YAK+IGS+M+LMNYTRPDIAYAVSRLSRYTHNP   HW AL+ LL+YLKGT+D+ L F  
Sbjct: 947  YAKLIGSLMFLMNYTRPDIAYAVSRLSRYTHNPSGEHWIALKRLLKYLKGTLDWKLEFAG 1006

Query: 241  FPAVLEGYRDANWVTDNDEVNSTSGYVFLLGGGAIS 277
            FPAVLEGY DANWV+DNDEV+STSGYVF LGG AIS
Sbjct: 1007 FPAVLEGYCDANWVSDNDEVSSTSGYVFTLGGAAIS 1042

[Close]

BLAST of Cmc04g0103701 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 164.1 bits (414), Expect = 1.6e-40
Identity = 98/282 (34.75%), Postives = 154/282 (54.61%), Query Frame = 0


Query: 1   MDVKTTFLNGDLEEEIYMTQPEGFKI----SGQENKVCKLRKSLYGPKQAPKQWYEKFNN 60
           +D+   FLNGDL+EEIYM  P G+      S   N VC L+KS+YG KQA +QW+ KF+ 
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252

Query: 61  TLITNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKD 120
           TLI  GF  + SD   + K+     + + +YVDD++I   N   + + K  L S F+++D
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312

Query: 121 LEEADVILRVKIRKNKTSLSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLNKNK-GDS 180
           L      L ++I ++   +++CQ  Y   +L +       P   P D S   + +  GD 
Sbjct: 313 LGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372

Query: 181 VSQLEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYC 240
           V    Y ++IG +MYL   TR DI++AV++LS+++  P   H  A+  +L Y+KGT+   
Sbjct: 373 VDAKAYRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 432

Query: 241 LHFNKFPAV-LEGYRDANWVTDNDEVNSTSGYVFLLGGGAIS 277
           L ++    + L+ + DA++ +  D   ST+GY   LG   IS
Sbjct: 433 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLIS 473

[Close]

BLAST of Cmc04g0103701 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-22
Identity = 63/194 (32.47%), Postives = 104/194 (53.61%), Query Frame = 0


Query: 84  ICLYVDDMLIFGTNMELIIDTKLFLSSHFEMKDLEEADVILRVKIRKNKTSLSLCQSHYV 143
           + LYVDD+L+ G++  L+      LSS F MKDL      L ++I+ + + L L Q+ Y 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 144 EKILKKFDSFDVSPVRTPFDASKHLNKNKGDSVSQLEYAKIIGSVMYLMNYTRPDIAYAV 203
           E+IL      D  P+ TP     + + +        ++  I+G++ YL   TRPDI+YAV
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYL-TLTRPDISYAV 122

Query: 204 SRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEGYRDANWVTDNDEVNS 263
           + + +  H P    +D L+ +LRY+KGTI + L+ +K   + ++ + D++W        S
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 264 TSGYVFLLGGGAIS 277
           T+G+   LG   IS
Sbjct: 183 TTGFCTFLGCNIIS 195

[Close]

BLAST of Cmc04g0103701 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-05
Identity = 26/83 (31.33%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 189 MYLMNYTRPDIAYAVSRLSRYTHNPDRNHWDALRHLLRYLKGTIDYCLHFNKFPAV-LEG 248
           MYL   TRPD+ +AV+RLS+++         A+  +L Y+KGT+   L ++    + L+ 
Sbjct: 1   MYL-TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 60

Query: 249 YRDANWVTDNDEVNSTSGYVFLL 271
           + D++W +  D   S +G+  L+
Sbjct: 61  FADSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:

BLAST of Cmc04g0103701 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK06518.1	7.1e-147	94.57	ty1-copia retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAD6453934.1	4.8e-111	71.38	hypothetical protein E3N88_08640 [Mikania micrantha]	[more]
KAE8670806.1	6.0e-106	69.20	hypothetical protein F3Y22_tig00112079pilonHSYRG00011 [Hibiscus syriacus]	[more]
KAG7571733.1	1.3e-103	68.48	Integrase catalytic core [Arabidopsis suecica]	[more]
KAG7551885.1	3.7e-103	68.12	Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa]	[more]

BLAST of Cmc04g0103701 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	3.5e-64	46.15	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q94HW2	1.3e-50	40.29	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.1e-49	39.21	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	5.2e-44	39.56	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P25600	3.5e-32	32.97	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc04g0103701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C5T2	3.4e-147	94.57	Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5N6PGV2	2.3e-111	71.38	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Mikania micran...	[more]
A0A2N9EQT1	2.8e-109	70.29	Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB...	[more]
A0A2N9H4B0	2.8e-109	70.29	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37208 PE=4 SV=1	[more]
A0A6A2Y4J7	2.9e-106	69.20	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112079pilon...	[more]

BLAST of Cmc04g0103701 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.6e-40	34.75	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.5e-22	32.47	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	1.7e-05	31.33	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 1..162 e-value: 8.5E-48 score: 163.1
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 1..270
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0103701.1	Cmc04g0103701.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding