Cmc04g0103591 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0103591
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr04: 20732151 .. 20733356 (+)
RNA-Seq Expression	Cmc04g0103591
Synteny	Cmc04g0103591

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTTAAAAATGCTTTTCTTAATGGGACTCTTTCTGAAGAAGTGTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCACAAGGTGTGTCTCTTGCGTCGCGCACTATATGGCCTCAAACAGGCTCCACGAGCTTGGTTTGCCACATTTAGCTCTACCATCACTCAACTTGGTTTTACTTCTAGTCCTTATGACACTGCACTCTTTACTCGCCACACACCCCAAGGAATTGTTCTCCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACAAGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATAAAAGACCTTGGATCTCTCAATTACTTTCTTGGCCTTGAAGTCTCTCGCCTCTCAGACGGGTATTTATTGTCCCAAGCTAAATATGCCTCTGATCTTTTAGCTCGCTCAGGAATCACTGACTCTAACACCGCTTCAACGCCGTTAGATCCCAATGTTCATTTGACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCGGCAACTAGTTGGTAGTCTCATCTATCTAATAATGACTCGCCTAGACATTGCATATGATGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCATTTTACTGCCGTACTACGTATCCTTCGCTATATCAAAGGGACTTTGGGGCATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATCTGGCTATTCTGATGCAGATTGGGCTGGGGATCCCACTGATCGGCGCTCTACAAGAGGCTACTGCTTCTACTTAGGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCGTGCTCTTGCTGATACTACCGTTGAACTGTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGCAAGGTCCCACTCTCCTTTATTGTGATAATCGTAGTGCCATCCAAATTGCCCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATTCATCATCATCTCTTGAGTAACACTCTTCTTTTGCAACCTGTCTCCACCACTGAGCAACCAGCTGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAATTGCGTACCAAACTCAAGCTGATAGCTACTCTGCCACCTTGA

mRNA sequence

ATGGATGTTAAAAATGCTTTTCTTAATGGGACTCTTTCTGAAGAAGTGTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCACAAGGTGTGTCTCTTGCGTCGCGCACTATATGGCCTCAAACAGGCTCCACGAGCTTGGTTTGCCACATTTAGCTCTACCATCACTCAACTTGGTTTTACTTCTAGTCCTTATGACACTGCACTCTTTACTCGCCACACACCCCAAGGAATTGTTCTCCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACAAGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATAAAAGACCTTGGATCTCTCAATTACTTTCTTGGCCTTGAAGTCTCTCGCCTCTCAGACGGGTATTTATTGTCCCAAGCTAAATATGCCTCTGATCTTTTAGCTCGCTCAGGAATCACTGACTCTAACACCGCTTCAACGCCGTTAGATCCCAATGTTCATTTGACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCGGCAACTAGTTGGTAGTCTCATCTATCTAATAATGACTCGCCTAGACATTGCATATGATGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCATTTTACTGCCGTACTACGTATCCTTCGCTATATCAAAGGGACTTTGGGGCATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATCTGGCTATTCTGATGCAGATTGGGCTGGGGATCCCACTGATCGGCGCTCTACAAGAGGCTACTGCTTCTACTTAGGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCGTGCTCTTGCTGATACTACCGTTGAACTGTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGCAAGGTCCCACTCTCCTTTATTGTGATAATCGTAGTGCCATCCAAATTGCCCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATTCATCATCATCTCTTGAGTAACACTCTTCTTTTGCAACCTGTCTCCACCACTGAGCAACCAGCTGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAATTGCGTACCAAACTCAAGCTGATAGCTACTCTGCCACCTTGA

Coding sequence (CDS)

ATGGATGTTAAAAATGCTTTTCTTAATGGGACTCTTTCTGAAGAAGTGTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCACAAGGTGTGTCTCTTGCGTCGCGCACTATATGGCCTCAAACAGGCTCCACGAGCTTGGTTTGCCACATTTAGCTCTACCATCACTCAACTTGGTTTTACTTCTAGTCCTTATGACACTGCACTCTTTACTCGCCACACACCCCAAGGAATTGTTCTCCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACAAGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATAAAAGACCTTGGATCTCTCAATTACTTTCTTGGCCTTGAAGTCTCTCGCCTCTCAGACGGGTATTTATTGTCCCAAGCTAAATATGCCTCTGATCTTTTAGCTCGCTCAGGAATCACTGACTCTAACACCGCTTCAACGCCGTTAGATCCCAATGTTCATTTGACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCGGCAACTAGTTGGTAGTCTCATCTATCTAATAATGACTCGCCTAGACATTGCATATGATGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCATTTTACTGCCGTACTACGTATCCTTCGCTATATCAAAGGGACTTTGGGGCATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATCTGGCTATTCTGATGCAGATTGGGCTGGGGATCCCACTGATCGGCGCTCTACAAGAGGCTACTGCTTCTACTTAGGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCGTGCTCTTGCTGATACTACCGTTGAACTGTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGCAAGGTCCCACTCTCCTTTATTGTGATAATCGTAGTGCCATCCAAATTGCCCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATTCATCATCATCTCTTGAGTAACACTCTTCTTTTGCAACCTGTCTCCACCACTGAGCAACCAGCTGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAATTGCGTACCAAACTCAAGCTGATAGCTACTCTGCCACCTTGA

Protein sequence

MDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPYDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNYFLGLEVSRLSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLIMTRLDIAYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTVELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLIATLPP

Homology

[Close]

BLAST of Cmc04g0103591 vs. NCBI nr
Match: TYK30390.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 774.6 bits (1999), Expect = 4.1e-220
Identity = 385/401 (96.01%), Postives = 391/401 (97.51%), Query Frame = 0


Query: 1   MDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
           MDVKNAFLNGTLSEE+YMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG
Sbjct: 1   MDVKNAFLNGTLSEEMYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60

Query: 61  FTSSPYDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNY 120
           FTSSP+DTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFE+KDLGSLNY
Sbjct: 61  FTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNY 120

Query: 121 FLGLEVSRLSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLY 180
           FLGLEVSR SDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLY
Sbjct: 121 FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLY 180

Query: 181 RQLVGSLIYLIMTRLDIAYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 240
           RQLVGSLIYL +TR DI Y VHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS
Sbjct: 181 RQLVGSLIYLTVTRPDIVYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 240

Query: 241 SLVLSGYSDADWAGDPTDRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT 300
           SLVLSGYSDADWAGDPTDRRST GYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT
Sbjct: 241 SLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT 300

Query: 301 VELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLLSN 360
            ELLWL WLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFI HHLLSN
Sbjct: 301 AELLWLHWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSN 360

Query: 361 TLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLIATLPP 402
           TLLLQPVSTT+QPADIFTKALPSTRFNQLRTKLKL ATLPP
Sbjct: 361 TLLLQPVSTTKQPADIFTKALPSTRFNQLRTKLKLTATLPP 401

[Close]

BLAST of Cmc04g0103591 vs. NCBI nr
Match: KAA0057482.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 773.9 bits (1997), Expect = 7.0e-220
Identity = 385/401 (96.01%), Postives = 391/401 (97.51%), Query Frame = 0


Query: 1   MDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
           +DVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG
Sbjct: 375 IDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 434

Query: 61  FTSSPYDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNY 120
           FTSSP+DTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFE+KDLGSLNY
Sbjct: 435 FTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNY 494

Query: 121 FLGLEVSRLSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLY 180
           FLG EVSR SDGYLLSQAKYASDLLARSGIT+SNTASTPLDPNVHLTPYDGVPLE+VSLY
Sbjct: 495 FLGFEVSRRSDGYLLSQAKYASDLLARSGITNSNTASTPLDPNVHLTPYDGVPLEEVSLY 554

Query: 181 RQLVGSLIYLIMTRLDIAYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 240
           RQLVGSLIYL +TR DIAY VHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS
Sbjct: 555 RQLVGSLIYLTVTRPDIAYVVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 614

Query: 241 SLVLSGYSDADWAGDPTDRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT 300
           SLVLSGYSDADW GDPTDRRST GYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT
Sbjct: 615 SLVLSGYSDADWVGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT 674

Query: 301 VELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLLSN 360
            ELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFI HHLLSN
Sbjct: 675 AELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSN 734

Query: 361 TLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLIATLPP 402
           TLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKL ATLPP
Sbjct: 735 TLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP 775

[Close]

BLAST of Cmc04g0103591 vs. NCBI nr
Match: KAA0064060.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 773.5 bits (1996), Expect = 9.1e-220
Identity = 385/401 (96.01%), Postives = 390/401 (97.26%), Query Frame = 0


Query: 1    MDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
            MDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTI QLG
Sbjct: 825  MDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTIAQLG 884

Query: 61   FTSSPYDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNY 120
            FTSSP+DTALFTRHTP+GIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFE+KDLGSLNY
Sbjct: 885  FTSSPHDTALFTRHTPRGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNY 944

Query: 121  FLGLEVSRLSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLY 180
            FLGLEVSR SDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLY
Sbjct: 945  FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLY 1004

Query: 181  RQLVGSLIYLIMTRLDIAYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 240
            RQLVGSLIYL +TR DIAY VHIVSQFMAAPRTIHFT VLRILRYIKGTLGHGLQFSSQS
Sbjct: 1005 RQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQS 1064

Query: 241  SLVLSGYSDADWAGDPTDRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT 300
            SLVLSGYSDADWAGDPTDRRST GYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT
Sbjct: 1065 SLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT 1124

Query: 301  VELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLLSN 360
             ELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFI HHLLSN
Sbjct: 1125 AELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSN 1184

Query: 361  TLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLIATLPP 402
            TLLLQPV TTEQPADIFTKALPSTRFNQLRTKLKL ATLPP
Sbjct: 1185 TLLLQPVFTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP 1225

[Close]

BLAST of Cmc04g0103591 vs. NCBI nr
Match: KAA0068118.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 771.2 bits (1990), Expect = 4.5e-219
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 18  MKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPYDTALFTRHTPQ 77
           MKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPYDTALFTRHTPQ
Sbjct: 1   MKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPYDTALFTRHTPQ 60

Query: 78  GIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNYFLGLEVSRLSDGYLLSQ 137
           GIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNYFLGLEVSRLSDGYLLSQ
Sbjct: 61  GIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNYFLGLEVSRLSDGYLLSQ 120

Query: 138 AKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLIMTRLDI 197
           AKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLIMTRLDI
Sbjct: 121 AKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLIMTRLDI 180

Query: 198 AYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPT 257
           AYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPT
Sbjct: 181 AYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPT 240

Query: 258 DRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTVELLWLRWLLADMGVPQ 317
           DRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTVELLWLRWLLADMGVPQ
Sbjct: 241 DRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTVELLWLRWLLADMGVPQ 300

Query: 318 QGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLLSNTLLLQPVSTTEQPADIF 377
           QGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLLSNTLLLQPVSTTEQPADIF
Sbjct: 301 QGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLLSNTLLLQPVSTTEQPADIF 360

Query: 378 TKALPSTRFNQLRTKLKLIATLPP 402
           TKALPSTRFNQLRTKLKLIATLPP
Sbjct: 361 TKALPSTRFNQLRTKLKLIATLPP 384

[Close]

BLAST of Cmc04g0103591 vs. NCBI nr
Match: KAA0031710.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 769.2 bits (1985), Expect = 1.7e-218
Identity = 383/401 (95.51%), Postives = 389/401 (97.01%), Query Frame = 0


Query: 1    MDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
            MDVKNAFLNGTLSEE+YMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQL 
Sbjct: 894  MDVKNAFLNGTLSEEMYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLS 953

Query: 61   FTSSPYDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNY 120
            FTSSP+DTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFE+KDLGSLNY
Sbjct: 954  FTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNY 1013

Query: 121  FLGLEVSRLSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLY 180
            FLGLEVSR SDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLY
Sbjct: 1014 FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLY 1073

Query: 181  RQLVGSLIYLIMTRLDIAYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 240
            RQLVGSLIYL +TR DI Y VHIVSQFMAA RTIHFTAVLRILRYIKGTLGHGLQFSSQS
Sbjct: 1074 RQLVGSLIYLTVTRPDIVYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGLQFSSQS 1133

Query: 241  SLVLSGYSDADWAGDPTDRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT 300
            SLVLSGYSDADWAGDPTDRRST GYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT
Sbjct: 1134 SLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT 1193

Query: 301  VELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLLSN 360
             ELLWL WLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFI HHLLSN
Sbjct: 1194 AELLWLHWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSN 1253

Query: 361  TLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLIATLPP 402
            TLLLQPVSTT+QPADIFTKALPSTRFNQLRTKLKL ATLPP
Sbjct: 1254 TLLLQPVSTTKQPADIFTKALPSTRFNQLRTKLKLTATLPP 1294

[Close]

BLAST of Cmc04g0103591 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.9e-95
Identity = 188/403 (46.65%), Postives = 250/403 (62.03%), Query Frame = 0


Query: 1    MDVKNAFLNGTLSEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQ 60
            +DV NAFL GTL+++VYM  PPG      P+ VC LR+ALYGLKQAPRAW+    + +  
Sbjct: 1064 LDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLT 1123

Query: 61   LGFTSSPYDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSL 120
            +GF +S  DT+LF     + IV +L+YVDD++ITGNDP  + +    L Q F +KD   L
Sbjct: 1124 IGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEEL 1183

Query: 121  NYFLGLEVSRLSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVS 180
            +YFLG+E  R+  G  LSQ +Y  DLLAR+ +  +   +TP+ P+  L+ Y G  L D +
Sbjct: 1184 HYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPT 1243

Query: 181  LYRQLVGSLIYLIMTRLDIAYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSS 240
             YR +VGSL YL  TR DI+Y V+ +SQFM  P   H  A+ RILRY+ GT  HG+    
Sbjct: 1244 EYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKK 1303

Query: 241  QSSLVLSGYSDADWAGDPTDRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALAD 300
             ++L L  YSDADWAGD  D  ST GY  YLG   ISW SKKQ  V RSSTE+EYR++A+
Sbjct: 1304 GNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVAN 1363

Query: 301  TTVELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLL 360
            T+ E+ W+  LL ++G+    P ++YCDN  A  +  N VFH R KHI  D HFI + + 
Sbjct: 1364 TSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQ 1423

Query: 361  SNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLIATLPP 402
            S  L +  VST +Q AD  TK L  T F    +K+  +  +PP
Sbjct: 1424 SGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIG-VTRVPP 1465

[Close]

BLAST of Cmc04g0103591 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 5.7e-92
Identity = 181/402 (45.02%), Postives = 244/402 (60.70%), Query Frame = 0


Query: 1    MDVKNAFLNGTLSEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQ 60
            +DV NAFL GTL++EVYM  PPG      P  VC LR+A+YGLKQAPRAW+    + +  
Sbjct: 1047 LDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLT 1106

Query: 61   LGFTSSPYDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSL 120
            +GF +S  DT+LF     + I+ +L+YVDD++ITGND   +      L Q F +K+   L
Sbjct: 1107 VGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDL 1166

Query: 121  NYFLGLEVSRLSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVS 180
            +YFLG+E  R+  G  LSQ +Y  DLLAR+ +  +   +TP+  +  LT + G  L D +
Sbjct: 1167 HYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPT 1226

Query: 181  LYRQLVGSLIYLIMTRLDIAYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSS 240
             YR +VGSL YL  TR D++Y V+ +SQ+M  P   H+ A+ R+LRY+ GT  HG+    
Sbjct: 1227 EYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKK 1286

Query: 241  QSSLVLSGYSDADWAGDPTDRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALAD 300
             ++L L  YSDADWAGD  D  ST GY  YLG   ISW SKKQ  V RSSTE+EYR++A+
Sbjct: 1287 GNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVAN 1346

Query: 301  TTVELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLL 360
            T+ EL W+  LL ++G+    P ++YCDN  A  +  N VFH R KHI  D HFI + + 
Sbjct: 1347 TSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQ 1406

Query: 361  SNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLIATLP 401
            S  L +  VST +Q AD  TK L    F     K+ +I   P
Sbjct: 1407 SGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKVPP 1448

[Close]

BLAST of Cmc04g0103591 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 272.7 bits (696), Expect = 6.6e-72
Identity = 152/403 (37.72%), Postives = 234/403 (58.06%), Query Frame = 0


Query: 1    MDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
            MDVK AFLNGTL EE+YM+ P G S     VC L +A+YGLKQA R WF  F   + +  
Sbjct: 1001 MDVKTAFLNGTLKEEIYMRLPQGISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECE 1060

Query: 61   FTSSPYDTALF--TRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSL 120
            F +S  D  ++   +      + +LLYVDD++I   D   +++ + YL + F + DL  +
Sbjct: 1061 FVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEI 1120

Query: 121  NYFLGLEVSRLSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVS 180
             +F+G+ +    D   LSQ+ Y   +L++  + + N  STPL   ++    +    ED +
Sbjct: 1121 KHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSD--EDCN 1180

Query: 181  L-YRQLVGSLIYLIM-TRLDIAYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQF 240
               R L+G L+Y+++ TR D+   V+I+S++ +   +  +  + R+LRY+KGT+   L F
Sbjct: 1181 TPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF 1240

Query: 241  SSQSSL--VLSGYSDADWAGDPTDRRSTRGYCFYLGD-SLISWRSKKQSVVSRSSTESEY 300
                +    + GY D+DWAG   DR+ST GY F + D +LI W +K+Q+ V+ SSTE+EY
Sbjct: 1241 KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEY 1300

Query: 301  RALADTTVELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFI 360
             AL +   E LWL++LL  + +  + P  +Y DN+  I IA+N   H+R KHI+   HF 
Sbjct: 1301 MALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFA 1360

Query: 361  HHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLI 397
               + +N + L+ + T  Q ADIFTK LP+ RF +LR KL L+
Sbjct: 1361 REQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGLL 1401

[Close]

BLAST of Cmc04g0103591 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.8e-70
Identity = 159/399 (39.85%), Postives = 235/399 (58.90%), Query Frame = 0


Query: 1    MDVKNAFLNGTLSEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQ 60
            +DVK AFL+G L EE+YM+ P G   +   H VC L ++LYGLKQAPR W+  F S +  
Sbjct: 921  LDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKS 980

Query: 61   LGFTSSPYDTAL-FTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGS 120
              +  +  D  + F R +    ++LLLYVDDM+I G D   I+ L+  L + F++KDLG 
Sbjct: 981  QTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGP 1040

Query: 121  LNYFLGLEV--SRLSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHL-------TP 180
                LG+++   R S    LSQ KY   +L R  + ++   STPL  ++ L       T 
Sbjct: 1041 AQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTV 1100

Query: 181  YDGVPLEDVSLYRQLVGSLIY-LIMTRLDIAYDVHIVSQFMAAPRTIHFTAVLRILRYIK 240
             +   +  V  Y   VGSL+Y ++ TR DIA+ V +VS+F+  P   H+ AV  ILRY++
Sbjct: 1101 EEKGNMAKVP-YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLR 1160

Query: 241  GTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTRGYCFYLGDSLISWRSKKQSVVSRS 300
            GT G  L F   S  +L GY+DAD AGD  +R+S+ GY F      ISW+SK Q  V+ S
Sbjct: 1161 GTTGDCLCFGG-SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALS 1220

Query: 301  STESEYRALADTTVELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIE 360
            +TE+EY A  +T  E++WL+  L ++G+ Q+   ++YCD++SAI ++ N ++H RTKHI+
Sbjct: 1221 TTEAEYIAATETGKEMIWLKRFLQELGLHQK-EYVVYCDSQSAIDLSKNSMYHARTKHID 1280

Query: 361  NDCHFIHHHLLSNTLLLQPVSTTEQPADIFTKALPSTRF 387
               H+I   +   +L +  +ST E PAD+ TK +P  +F
Sbjct: 1281 VRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKF 1316

[Close]

BLAST of Cmc04g0103591 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.6e-47
Identity = 101/224 (45.09%), Postives = 140/224 (62.50%), Query Frame = 0


Query: 82  LLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNYFLGLEVSRLSDGYLLSQAKYA 141
           LLLYVDD+++TG+    ++ L   L   F +KDLG ++YFLG+++     G  LSQ KYA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 142 SDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLIMTRLDIAYDV 201
             +L  +G+ D    STPL   ++ +        D S +R +VG+L YL +TR DI+Y V
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 202 HIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRS 261
           +IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  + D+DWAG  + RRS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 262 TRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTVELLW 306
           T G+C +LG ++ISW +K+Q  VSRSSTE+EYRALA T  EL W
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc04g0103591 vs. ExPASy TrEMBL
Match: A0A5D3E4B0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2254G00020 PE=4 SV=1)

HSP 1 Score: 774.6 bits (1999), Expect = 2.0e-220
Identity = 385/401 (96.01%), Postives = 391/401 (97.51%), Query Frame = 0


Query: 1   MDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
           MDVKNAFLNGTLSEE+YMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG
Sbjct: 1   MDVKNAFLNGTLSEEMYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60

Query: 61  FTSSPYDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNY 120
           FTSSP+DTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFE+KDLGSLNY
Sbjct: 61  FTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNY 120

Query: 121 FLGLEVSRLSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLY 180
           FLGLEVSR SDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLY
Sbjct: 121 FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLY 180

Query: 181 RQLVGSLIYLIMTRLDIAYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 240
           RQLVGSLIYL +TR DI Y VHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS
Sbjct: 181 RQLVGSLIYLTVTRPDIVYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 240

Query: 241 SLVLSGYSDADWAGDPTDRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT 300
           SLVLSGYSDADWAGDPTDRRST GYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT
Sbjct: 241 SLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT 300

Query: 301 VELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLLSN 360
            ELLWL WLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFI HHLLSN
Sbjct: 301 AELLWLHWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSN 360

Query: 361 TLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLIATLPP 402
           TLLLQPVSTT+QPADIFTKALPSTRFNQLRTKLKL ATLPP
Sbjct: 361 TLLLQPVSTTKQPADIFTKALPSTRFNQLRTKLKLTATLPP 401

[Close]

BLAST of Cmc04g0103591 vs. ExPASy TrEMBL
Match: A0A5A7UNP5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003640 PE=4 SV=1)

HSP 1 Score: 773.9 bits (1997), Expect = 3.4e-220
Identity = 385/401 (96.01%), Postives = 391/401 (97.51%), Query Frame = 0


Query: 1   MDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
           +DVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG
Sbjct: 375 IDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 434

Query: 61  FTSSPYDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNY 120
           FTSSP+DTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFE+KDLGSLNY
Sbjct: 435 FTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNY 494

Query: 121 FLGLEVSRLSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLY 180
           FLG EVSR SDGYLLSQAKYASDLLARSGIT+SNTASTPLDPNVHLTPYDGVPLE+VSLY
Sbjct: 495 FLGFEVSRRSDGYLLSQAKYASDLLARSGITNSNTASTPLDPNVHLTPYDGVPLEEVSLY 554

Query: 181 RQLVGSLIYLIMTRLDIAYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 240
           RQLVGSLIYL +TR DIAY VHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS
Sbjct: 555 RQLVGSLIYLTVTRPDIAYVVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 614

Query: 241 SLVLSGYSDADWAGDPTDRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT 300
           SLVLSGYSDADW GDPTDRRST GYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT
Sbjct: 615 SLVLSGYSDADWVGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT 674

Query: 301 VELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLLSN 360
            ELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFI HHLLSN
Sbjct: 675 AELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSN 734

Query: 361 TLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLIATLPP 402
           TLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKL ATLPP
Sbjct: 735 TLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP 775

[Close]

BLAST of Cmc04g0103591 vs. ExPASy TrEMBL
Match: A0A5A7V9Z8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold99G00670 PE=4 SV=1)

HSP 1 Score: 773.5 bits (1996), Expect = 4.4e-220
Identity = 385/401 (96.01%), Postives = 390/401 (97.26%), Query Frame = 0


Query: 1    MDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
            MDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTI QLG
Sbjct: 825  MDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTIAQLG 884

Query: 61   FTSSPYDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNY 120
            FTSSP+DTALFTRHTP+GIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFE+KDLGSLNY
Sbjct: 885  FTSSPHDTALFTRHTPRGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNY 944

Query: 121  FLGLEVSRLSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLY 180
            FLGLEVSR SDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLY
Sbjct: 945  FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLY 1004

Query: 181  RQLVGSLIYLIMTRLDIAYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 240
            RQLVGSLIYL +TR DIAY VHIVSQFMAAPRTIHFT VLRILRYIKGTLGHGLQFSSQS
Sbjct: 1005 RQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQS 1064

Query: 241  SLVLSGYSDADWAGDPTDRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT 300
            SLVLSGYSDADWAGDPTDRRST GYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT
Sbjct: 1065 SLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT 1124

Query: 301  VELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLLSN 360
             ELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFI HHLLSN
Sbjct: 1125 AELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSN 1184

Query: 361  TLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLIATLPP 402
            TLLLQPV TTEQPADIFTKALPSTRFNQLRTKLKL ATLPP
Sbjct: 1185 TLLLQPVFTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP 1225

[Close]

BLAST of Cmc04g0103591 vs. ExPASy TrEMBL
Match: A0A5A7VJV7 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00780 PE=4 SV=1)

HSP 1 Score: 771.2 bits (1990), Expect = 2.2e-219
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 18  MKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPYDTALFTRHTPQ 77
           MKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPYDTALFTRHTPQ
Sbjct: 1   MKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPYDTALFTRHTPQ 60

Query: 78  GIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNYFLGLEVSRLSDGYLLSQ 137
           GIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNYFLGLEVSRLSDGYLLSQ
Sbjct: 61  GIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNYFLGLEVSRLSDGYLLSQ 120

Query: 138 AKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLIMTRLDI 197
           AKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLIMTRLDI
Sbjct: 121 AKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLIMTRLDI 180

Query: 198 AYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPT 257
           AYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPT
Sbjct: 181 AYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPT 240

Query: 258 DRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTVELLWLRWLLADMGVPQ 317
           DRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTVELLWLRWLLADMGVPQ
Sbjct: 241 DRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTVELLWLRWLLADMGVPQ 300

Query: 318 QGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLLSNTLLLQPVSTTEQPADIF 377
           QGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLLSNTLLLQPVSTTEQPADIF
Sbjct: 301 QGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLLSNTLLLQPVSTTEQPADIF 360

Query: 378 TKALPSTRFNQLRTKLKLIATLPP 402
           TKALPSTRFNQLRTKLKLIATLPP
Sbjct: 361 TKALPSTRFNQLRTKLKLIATLPP 384

[Close]

BLAST of Cmc04g0103591 vs. ExPASy TrEMBL
Match: A0A5A7SLT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G004960 PE=4 SV=1)

HSP 1 Score: 769.2 bits (1985), Expect = 8.3e-219
Identity = 383/401 (95.51%), Postives = 389/401 (97.01%), Query Frame = 0


Query: 1    MDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60
            MDVKNAFLNGTLSEE+YMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQL 
Sbjct: 894  MDVKNAFLNGTLSEEMYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLS 953

Query: 61   FTSSPYDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNY 120
            FTSSP+DTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFE+KDLGSLNY
Sbjct: 954  FTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNY 1013

Query: 121  FLGLEVSRLSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLY 180
            FLGLEVSR SDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE+VSLY
Sbjct: 1014 FLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEEVSLY 1073

Query: 181  RQLVGSLIYLIMTRLDIAYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQS 240
            RQLVGSLIYL +TR DI Y VHIVSQFMAA RTIHFTAVLRILRYIKGTLGHGLQFSSQS
Sbjct: 1074 RQLVGSLIYLTVTRPDIVYAVHIVSQFMAASRTIHFTAVLRILRYIKGTLGHGLQFSSQS 1133

Query: 241  SLVLSGYSDADWAGDPTDRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT 300
            SLVLSGYSDADWAGDPTDRRST GYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT
Sbjct: 1134 SLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTT 1193

Query: 301  VELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIHHHLLSN 360
             ELLWL WLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFI HHLLSN
Sbjct: 1194 AELLWLHWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSN 1253

Query: 361  TLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLIATLPP 402
            TLLLQPVSTT+QPADIFTKALPSTRFNQLRTKLKL ATLPP
Sbjct: 1254 TLLLQPVSTTKQPADIFTKALPSTRFNQLRTKLKLTATLPP 1294

[Close]

BLAST of Cmc04g0103591 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 350.1 bits (897), Expect = 2.3e-96
Identity = 177/359 (49.30%), Postives = 239/359 (66.57%), Query Frame = 0


Query: 1   MDVKNAFLNGTLSEEVYMKPPP------GTSSPPHKVCLLRRALYGLKQAPRAWFATFSS 60
           +D+ NAFLNG L EE+YMK PP      G S PP+ VC L++++YGLKQA R WF  FS 
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252

Query: 61  TITQLGFTSSPYDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEIKD 120
           T+   GF  S  D   F + T    + +L+YVDD+II  N+  A+ +L+  L   F+++D
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312

Query: 121 LGSLNYFLGLEVSRLSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPL 180
           LG L YFLGLE++R + G  + Q KYA DLL  +G+     +S P+DP+V  + + G   
Sbjct: 313 LGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372

Query: 181 EDVSLYRQLVGSLIYLIMTRLDIAYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGL 240
            D   YR+L+G L+YL +TRLDI++ V+ +SQF  APR  H  AV++IL YIKGT+G GL
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432

Query: 241 QFSSQSSLVLSGYSDADWAGDPTDRRSTRGYCFYLGDSLISWRSKKQSVVSRSSTESEYR 300
            +SSQ+ + L  +SDA +      RRST GYC +LG SLISW+SKKQ VVS+SS E+EYR
Sbjct: 433 FYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYR 492

Query: 301 ALADTTVELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFI 354
           AL+  T E++WL     ++ +P   PTLL+CDN +AI IA N VFHERTKHIE+DCH +
Sbjct: 493 ALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSV 551

[Close]

BLAST of Cmc04g0103591 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 189.9 bits (481), Expect = 4.0e-48
Identity = 101/224 (45.09%), Postives = 140/224 (62.50%), Query Frame = 0


Query: 82  LLLYVDDMIITGNDPQAISDLQHYLGQHFEIKDLGSLNYFLGLEVSRLSDGYLLSQAKYA 141
           LLLYVDD+++TG+    ++ L   L   F +KDLG ++YFLG+++     G  LSQ KYA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 142 SDLLARSGITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLIMTRLDIAYDV 201
             +L  +G+ D    STPL   ++ +        D S +R +VG+L YL +TR DI+Y V
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 202 HIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRS 261
           +IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  + D+DWAG  + RRS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 262 TRGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTVELLW 306
           T G+C +LG ++ISW +K+Q  VSRSSTE+EYRALA T  EL W
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc04g0103591 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 77.8 bits (190), Expect = 2.2e-14
Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 188 IYLIMTRLDIAYDVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGY 247
           +YL +TR D+ + V+ +SQF +A RT    AV ++L Y+KGT+G GL +S+ S L L  +
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 248 SDADWAGDPTDRRSTRGYC 267
           +D+DWA  P  RRS  G+C
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:

BLAST of Cmc04g0103591 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK30390.1	4.1e-220	96.01	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0057482.1	7.0e-220	96.01	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0064060.1	9.1e-220	96.01	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0068118.1	4.5e-219	100.00	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0031710.1	1.7e-218	95.51	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc04g0103591 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	1.9e-95	46.65	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	5.7e-92	45.02	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	6.6e-72	37.72	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	2.8e-70	39.85	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P92519	5.6e-47	45.09	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc04g0103591 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E4B0	2.0e-220	96.01	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7UNP5	3.4e-220	96.01	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5A7V9Z8	4.4e-220	96.01	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VJV7	2.2e-219	100.00	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5A7SLT8	8.3e-219	95.51	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc04g0103591 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.3e-96	49.30	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	4.0e-48	45.09	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	2.2e-14	45.57	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 1..160 e-value: 3.5E-44 score: 151.2
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 1..279
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 246..383 e-value: 2.2019E-83 score: 249.308
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..351

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0103591.1	Cmc04g0103591.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding