Cmc04g0103511 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0103511
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	ATP-dependent DNA helicase
Location	CMiso1.1chr04: 20612121 .. 20616025 (-)
RNA-Seq Expression	Cmc04g0103511
Synteny	Cmc04g0103511

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCAAGCGACAGATGATTGCAAAAACGATAGTTTTAAAGTTCCTTGCTTTCTTCTTTCTCTCTGAGGCACCACACCCTATTTTGTAGTTTTCTTTTTCTTTTTTTTCTTTTCCAAGGAGGACCTTTCTTTTTGTTTTGATGTCCCATACTCCATCTTTTTTAATAGGTCATGCTAGAGTTATTATTTCAATGTTACAAGATGTACAGAAGAGCAACCAGAAGATGACGATGTTGCAGTTAGTAGACAAATTGAAAGCAAAACACAATGATCTAGGTTGGTTTTCTGATTTATGATATTGTTCACTGTCCCAAGTTTCCATTGATTGCTAAAAGACCTGTATGTATAGATCTCACATGGTTTTACGTAGTTTTAGAATTAAAACTATCCAATTGAGGCTGTTGTTGAATTTTCACATGCTTGTGTTACACCTAATTAGCACCATTACCTAGCATACATGTACGCGCACAGACACACACATATATACATACCATGTGTTGGAAAGTGAACTTTATCTATTGGGTATTAGGTATTTTACGCTAGATGGCAGATGTTATGTATATTTTTTCTTTATATAGAAACAAATAATATATCATTAAAAGAGAACGAGATGTGTGTGAAGGCAGATACACATTAAGAATTCCTCCCAAGTTTAAGGTCACAGGAGATTAGAAGAAAGCTCTCTAATTGGTATTTATACAAGTGTTCAACAAATAATGGGGGAGGACAAGAGGACACACTTTCTTTCACTTCTGCTCCAAACTATAGGAATCAAACATTTGTCCATGATACGGTCAAGAGCATTATAACAAGATTTATAAGTGTGGGCTTCAGTTGCCATACTTGCAAGCATGTCCGATTGCTTTGTGAGATTAGTCGAGGTACGTGTAAGTTGACTCGGACACTCACATATATAAGAAAAGAAAAAACTAGACATTAATAGAAAGTAAGATCTAACTAACTTACATGATGAAAATTCAAGAATCAAATAAGTAAATTGCAGCAAGTATTTGAAAAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAACAAGTTTATTTATTAATAAATATAATGAGATGAAAGGTTAAAGTGCAAGAGAATTATATAATGAGCAAAAATCTAAGGATCAACAAGCGCACCCGGACATCTCAACTAAGTTGACACCCTCTTGGCACCCTCATCATCTCCAAACATCACCTTTAAAATTGCAGCAAGTAGTTAGAAAAGATCACCTTTAAAGTACTCCTTGACTGCTTTCTATTTAACTTTTGATTATTCATTTAGTTTTAGCTTCTTAAACTAGTGAAGCTTCTCCTCTCTCTCCCTCTCTCCCCCTTCCTATCACGTGCATTTGAGTGTACTGCCATCGTTTTATTATCCAAGTTATTTCTTGTTGTCTGATAGAAATTGTTTTGCTTGGCAATACAGTTTGGAGTACTTCATTATTTGAAGTCTTAACGTGCATTTTTAATTTCAGTTTCTGACCTAAGGAAAGAGGAAATAGAGCAACTTATCGTACAACTTTTATTAGATCGTGTTTTGGTAAGGATTCTTTCTCTCTATCTAGCTTACTTTAATACATTGAAGACCTAGGGGAAGGTGGGGGGAGATGGAACCATGGAGGATTTAGCATCTTATAGCATTCTTGAGGTTCTCCATATAAGATATTCTTCTCCTGCCTTTCCTAATTGAGACAAATAAGGAGCACTGCTGTAACTGCTTTACGTTCTTTTGGGATTGGAGACCCTTCCTTCTGTATTCATTTTTTCATATATCTATACAAATTACTCGTGCTCTAAAACGTTCCTCGGGTCCCCTCCAAAGTTAAAATATAGAATGAAACTTATGTCACGTTACTCACGGTATGAAACATTCTAATTGTTCTTTAAGATTAATACTAAACGCTACTTGTGCTTTATTTGTTTGATTGTAAATCTTCTTAGCTATCCGTCTAATTTCTACGTCATGTGGCTACTTTTTATGTTCGTTGTTGGCACATCTATCCTGCTATAGTCTCTCTCTTCTAACCCATTGTGACATTGAAATAATCTTCTGTTGCTTCAGAAAGAAGAATTTCAGCATACAGCTTATGCTACTAATGCGTATGTTTCCATTGGGCCATTGGCTCGGCAAGTACTGCAAGGTCAGTATTTTTTTTTCCCAACAAGTGATGGCCATATGAAAACACTGGAAATTAAAAGAATTATTTTCTTGTTATTGCTCTAAAGCCAGAAGTAGATATGATTTTTGCGTTCTTTCAAGTTTCAACATACAGAAATTTAAGACCACTGTATTCTAATTTCTAAACAACTTTTCAGTTGATTTTCTTTTTCTAAGAAACATGTATATTCACATAACAAAAGAGAACAACCTAAGGGCAAGGGATAAGAGGACTCTCCCACGGAGAAACTAGAAAATGATGGCCTTCCAGTTATTGAATATCATAGAAAGGCTACATAATTACAAAAGTGTTCGGTGTAATTCGTTCTCCACCAAGAAGTTGTGTGTTGCAACACAATTCAAAAAGAATCAAAAGAATTATAGCTATCTTAAAAAATTCTACTATTCCTTTCTTTCCAAATACACCACAAAAGGGACCAGGTAGCACGTCTCCATAAGATGTTTCCTTTCAGGCTATAACCTCTAATGTTGAGCCTTTCAATCAACCAACTAACAACTTTTCGGTTAATAATATCTATCATCAAAAGTATGGTTTCTTTCTTTAGTCCAATGACCTGATACCACAATTGAACTTGGACGGATCCAATTATTATAATTTTCAATTTCAGAGAATGAGAAACACACTTCAGTTATCGAAGTATAATTATTATTCTTCTTACTTTACTTGAAAAATTATGAAGCTGGAAAAGGATTACAACAAGGAATATAACAATTGACTTTGCTGACATTTTTCTACTTACAGGGAAGAAGGTCGTGAAAATTGAGATTTCCGGCAAACAGAAGGTAACTGGTGTTAAATCTACAAGAAAAAGCGCTGCTCCGTCAGGTTTAGAGTGTAAGCTTGACAAGCTACGCAAGGAACTTGCATCCATGGACGGAGGCATATTCCCTCATTCAGTGCTCTCAACCCAGCAAATCAGCGTCTTAAGTGCCCAAAAGCCTACTTCCTTGGATCAGGCAAATCTTCTTAACATCAATTTTAATCTTTGATTTTGAAAAGGGCGCCTGCTGGTTGCTTAGGAAGCCTTAATAGGTGTCTTATTCAATTTAAATTATAAGCAACTGAATGGAAGGATTACAAAAAGTTCCCACTTGTCCAGATCAAGTAGACCTTTTTTTATAACTATTTTGTTTCTAGTTTCTTTTTAACACATTAGACTGCAGTTGTCATTCAAAAATCTAAAATTCTGAAAATGTTAAATGGTTTTAATTTGCAGTTGGAAACAATGATTGGAAAAGTGAAGGCAGAGAAGTATGGGGATAGAATTCTCGAGGAAATAGACAAGTGGTCCATTGGTCAAAATCCAAATGCTTCCGAAGAAGAGCAAGAAGAAGATGAAAATAGGACTCCAAAAAGACCAAAAACCATTAACACTCACGTTGTTATTGAGAGCAGCGATGAAGAAGCCTGATGCATTCAACTGACAATTTTGTCGTCAAGATCCAATATAACAACTAATCCTTTGGTTTGTAGCTTTCTTCCTCATCTCTTATCTTTTAATTGCTATTTATGAAATAGATCCTGAATTCTGAGAGGAATTCACTTATCCTTTAAGTTGCTCCCTTCCTGCCATGTGCTCTTAGTTGCTTCGAATGATCATAACTTGATATGATCGAAAGTGTATTATTCGTTGTTAATGGATCAAAACTCAATTCTTTTAATACAACAAGTACGAGGTTGAAAGATTGAACTTCTAACCTTTAGGGAGAACTAAACTCAATTTGG

mRNA sequence

GCCAAGCGACAGATGATTGCAAAAACGATAGTTTTAAAGTTCCTTGCTTTCTTCTTTCTCTCTGAGGCACCACACCCTATTTTGTAGTTTTCTTTTTCTTTTTTTTCTTTTCCAAGGAGGACCTTTCTTTTTGTTTTGATGTCCCATACTCCATCTTTTTTAATAGGTCATGCTAGAGTTATTATTTCAATGTTACAAGATGTACAGAAGAGCAACCAGAAGATGACGATGTTGCAGTTAGTAGACAAATTGAAAGCAAAACACAATGATCTAGTTTCTGACCTAAGGAAAGAGGAAATAGAGCAACTTATCGTACAACTTTTATTAGATCGTGTTTTGAAAGAAGAATTTCAGCATACAGCTTATGCTACTAATGCGTATGTTTCCATTGGGCCATTGGCTCGGCAAGTACTGCAAGGGAAGAAGGTCGTGAAAATTGAGATTTCCGGCAAACAGAAGGTAACTGGTGTTAAATCTACAAGAAAAAGCGCTGCTCCGTCAGGTTTAGAGTGTAAGCTTGACAAGCTACGCAAGGAACTTGCATCCATGGACGGAGGCATATTCCCTCATTCAGTGCTCTCAACCCAGCAAATCAGCGTCTTAAGTGCCCAAAAGCCTACTTCCTTGGATCAGTTGGAAACAATGATTGGAAAAGTGAAGGCAGAGAAGTATGGGGATAGAATTCTCGAGGAAATAGACAAGTGGTCCATTGGTCAAAATCCAAATGCTTCCGAAGAAGAGCAAGAAGAAGATGAAAATAGGACTCCAAAAAGACCAAAAACCATTAACACTCACGTTGTTATTGAGAGCAGCGATGAAGAAGCCTGATGCATTCAACTGACAATTTTGTCGTCAAGATCCAATATAACAACTAATCCTTTGGTTTGTAGCTTTCTTCCTCATCTCTTATCTTTTAATTGCTATTTATGAAATAGATCCTGAATTCTGAGAGGAATTCACTTATCCTTTAAGTTGCTCCCTTCCTGCCATGTGCTCTTAGTTGCTTCGAATGATCATAACTTGATATGATCGAAAGTGTATTATTCGTTGTTAATGGATCAAAACTCAATTCTTTTAATACAACAAGTACGAGGTTGAAAGATTGAACTTCTAACCTTTAGGGAGAACTAAACTCAATTTGG

Coding sequence (CDS)

ATGTCCCATACTCCATCTTTTTTAATAGGTCATGCTAGAGTTATTATTTCAATGTTACAAGATGTACAGAAGAGCAACCAGAAGATGACGATGTTGCAGTTAGTAGACAAATTGAAAGCAAAACACAATGATCTAGTTTCTGACCTAAGGAAAGAGGAAATAGAGCAACTTATCGTACAACTTTTATTAGATCGTGTTTTGAAAGAAGAATTTCAGCATACAGCTTATGCTACTAATGCGTATGTTTCCATTGGGCCATTGGCTCGGCAAGTACTGCAAGGGAAGAAGGTCGTGAAAATTGAGATTTCCGGCAAACAGAAGGTAACTGGTGTTAAATCTACAAGAAAAAGCGCTGCTCCGTCAGGTTTAGAGTGTAAGCTTGACAAGCTACGCAAGGAACTTGCATCCATGGACGGAGGCATATTCCCTCATTCAGTGCTCTCAACCCAGCAAATCAGCGTCTTAAGTGCCCAAAAGCCTACTTCCTTGGATCAGTTGGAAACAATGATTGGAAAAGTGAAGGCAGAGAAGTATGGGGATAGAATTCTCGAGGAAATAGACAAGTGGTCCATTGGTCAAAATCCAAATGCTTCCGAAGAAGAGCAAGAAGAAGATGAAAATAGGACTCCAAAAAGACCAAAAACCATTAACACTCACGTTGTTATTGAGAGCAGCGATGAAGAAGCCTGA

Protein sequence

MSHTPSFLIGHARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEEFQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKLRKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWSIGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA

Homology

[Close]

BLAST of Cmc04g0103511 vs. NCBI nr
Match: XP_008460413.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 34 isoform X1 [Cucumis melo])

HSP 1 Score: 409.1 bits (1050), Expect = 2.6e-110
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 11  HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE 70
           HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE
Sbjct: 490 HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE 549

Query: 71  FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL 130
           FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL
Sbjct: 550 FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL 609

Query: 131 RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS 190
           RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS
Sbjct: 610 RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS 669

Query: 191 IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA 230
           IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA
Sbjct: 670 IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA 708

[Close]

BLAST of Cmc04g0103511 vs. NCBI nr
Match: XP_008460415.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 34 isoform X2 [Cucumis melo])

HSP 1 Score: 409.1 bits (1050), Expect = 2.6e-110
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 11  HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE 70
           HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE
Sbjct: 414 HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE 473

Query: 71  FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL 130
           FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL
Sbjct: 474 FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL 533

Query: 131 RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS 190
           RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS
Sbjct: 534 RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS 593

Query: 191 IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA 230
           IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA
Sbjct: 594 IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA 632

[Close]

BLAST of Cmc04g0103511 vs. NCBI nr
Match: XP_031738250.1 (mediator of RNA polymerase II transcription subunit 34 isoform X2 [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 1.2e-104
Identity = 207/219 (94.52%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 11  HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE 70
           HARVIIS+LQDVQKSNQKMTMLQLVDKLK KHN LVSDLRKEEIEQLI+QLLLDRVLKEE
Sbjct: 468 HARVIISILQDVQKSNQKMTMLQLVDKLKTKHNGLVSDLRKEEIEQLIIQLLLDRVLKEE 527

Query: 71  FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL 130
           FQHTAYATNAYV++GPLARQVLQGKKVVKIEISGKQKVTGVKS RKS APSGLECKLDKL
Sbjct: 528 FQHTAYATNAYVTVGPLARQVLQGKKVVKIEISGKQKVTGVKSKRKSVAPSGLECKLDKL 587

Query: 131 RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS 190
           RKELAS+DGGIFPHSVLSTQQI VLSAQKPTSLDQLETMIGKVKAEKYGDRILEEI+KWS
Sbjct: 588 RKELASIDGGIFPHSVLSTQQIVVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIEKWS 647

Query: 191 IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA 230
           IGQNPNASEEEQEEDENRTPKRPKTI+THVVIESSDEEA
Sbjct: 648 IGQNPNASEEEQEEDENRTPKRPKTIDTHVVIESSDEEA 686

[Close]

BLAST of Cmc04g0103511 vs. NCBI nr
Match: XP_011651674.1 (mediator of RNA polymerase II transcription subunit 34 isoform X1 [Cucumis sativus] >XP_011651675.1 mediator of RNA polymerase II transcription subunit 34 isoform X1 [Cucumis sativus] >KGN58393.1 hypothetical protein Csa_001874 [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 1.2e-104
Identity = 207/219 (94.52%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 11  HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE 70
           HARVIIS+LQDVQKSNQKMTMLQLVDKLK KHN LVSDLRKEEIEQLI+QLLLDRVLKEE
Sbjct: 490 HARVIISILQDVQKSNQKMTMLQLVDKLKTKHNGLVSDLRKEEIEQLIIQLLLDRVLKEE 549

Query: 71  FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL 130
           FQHTAYATNAYV++GPLARQVLQGKKVVKIEISGKQKVTGVKS RKS APSGLECKLDKL
Sbjct: 550 FQHTAYATNAYVTVGPLARQVLQGKKVVKIEISGKQKVTGVKSKRKSVAPSGLECKLDKL 609

Query: 131 RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS 190
           RKELAS+DGGIFPHSVLSTQQI VLSAQKPTSLDQLETMIGKVKAEKYGDRILEEI+KWS
Sbjct: 610 RKELASIDGGIFPHSVLSTQQIVVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIEKWS 669

Query: 191 IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA 230
           IGQNPNASEEEQEEDENRTPKRPKTI+THVVIESSDEEA
Sbjct: 670 IGQNPNASEEEQEEDENRTPKRPKTIDTHVVIESSDEEA 708

[Close]

BLAST of Cmc04g0103511 vs. NCBI nr
Match: XP_038887820.1 (LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 2 [Benincasa hispida])

HSP 1 Score: 364.0 bits (933), Expect = 9.5e-97
Identity = 195/219 (89.04%), Postives = 210/219 (95.89%), Query Frame = 0


Query: 11  HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE 70
           HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHN+LVSDLRKEEIEQLI+QLLLDRVLKEE
Sbjct: 490 HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNELVSDLRKEEIEQLIIQLLLDRVLKEE 549

Query: 71  FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL 130
           FQHTAYATNAYV++GPLARQVLQGKKVVK+EISGKQKVTGVKS RK  A SGLE KLD+L
Sbjct: 550 FQHTAYATNAYVTVGPLARQVLQGKKVVKLEISGKQKVTGVKSRRKGVASSGLEYKLDEL 609

Query: 131 RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS 190
           RKELAS+DGGIFPHSVLSTQQISVLSAQKPTSLDQLET+IGKVKAEKYG+RILEEI+KWS
Sbjct: 610 RKELASVDGGIFPHSVLSTQQISVLSAQKPTSLDQLETLIGKVKAEKYGNRILEEIEKWS 669

Query: 191 IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA 230
           +GQN NAS+EEQ EDE RTPKRPKTIN+ +VIESSDE+A
Sbjct: 670 VGQNQNASQEEQ-EDEKRTPKRPKTINSPIVIESSDEKA 707

[Close]

BLAST of Cmc04g0103511 vs. ExPASy Swiss-Prot
Match: Q9FT73 (ATP-dependent DNA helicase Q-like 2 OS=Arabidopsis thaliana OX=3702 GN=RECQL2 PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.0e-53
Identity = 111/218 (50.92%), Postives = 163/218 (74.77%), Query Frame = 0


Query: 12  ARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEEF 71
           +++++SM+Q+ Q  +Q++TMLQL DKL+ KH DL+++L+++E+E L+++L++D VLKEEF
Sbjct: 490 SKLVVSMVQETQAKDQRVTMLQLGDKLRNKHKDLIAELKRDEVEHLVIKLIVDSVLKEEF 549

Query: 72  QHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKLR 131
           QHT Y+TNAYV++GPLA Q+LQG+K +K+E S +Q     K  ++S   SGLE KLD+LR
Sbjct: 550 QHTPYSTNAYVTMGPLANQLLQGRKTIKMETSSRQ----TKKLKRSITFSGLELKLDELR 609

Query: 132 KELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWSI 191
           KE+++ DG I PH+VLSTQQI  +S+QKP SL +LE++IGK+K EKYGDRILEE+ +   
Sbjct: 610 KEISAADGSILPHTVLSTQQIGSISSQKPVSLQELESIIGKLKTEKYGDRILEEVMRHEA 669

Query: 192 GQNPNASEEEQEED-ENRTPKRPKTINTHVVIESSDEE 229
                  +  +EE  ++R  KR KT    V++ESS EE
Sbjct: 670 VSEQLVEDPTKEETCKSRLRKRAKTQKDVVLVESSGEE 703

[Close]

BLAST of Cmc04g0103511 vs. ExPASy Swiss-Prot
Match: Q6AYJ1 (ATP-dependent DNA helicase Q1 OS=Rattus norvegicus OX=10116 GN=Recql PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.5e-07
Identity = 39/133 (29.32%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 11  HARVIISMLQDVQKSNQKMTMLQLVDKLKAK-------HNDLVSDLRKEEIEQLIVQLLL 70
           H + +I +L+  +  N+K+T L+L+D    K           V  L +E++E++IV  LL
Sbjct: 492 HCQALIKILKQAEGLNEKLTPLKLIDAWMGKGAAKFRVAGVAVPALPREDLEKIIVHALL 551

Query: 71  DRVLKEEFQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGL 130
            + LKE++  TAYAT +Y+ +GP A  +      V +++         +S+ ++A+P   
Sbjct: 552 QQYLKEDYSFTAYATISYLKVGPRASLLSNEGHAVTMQVK-----RSTQSSVRAASPEA- 611

Query: 131 ECKLDKLRKELAS 137
            C++D   KE +S
Sbjct: 612 -CEVDSKGKEKSS 617

[Close]

BLAST of Cmc04g0103511 vs. ExPASy Swiss-Prot
Match: P46063 (ATP-dependent DNA helicase Q1 OS=Homo sapiens OX=9606 GN=RECQL PE=1 SV=3)

HSP 1 Score: 52.8 bits (125), Expect = 6.1e-06
Identity = 40/151 (26.49%), Postives = 75/151 (49.67%), Query Frame = 0


Query: 11  HARVIISMLQDVQKSNQKMTMLQLVDKLKAK-------HNDLVSDLRKEEIEQLIVQLLL 70
           + R +I +L+  ++ N+K+T L+L+D    K          +   L +E++E++I   L+
Sbjct: 492 YCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVAPTLPREDLEKIIAHFLI 551

Query: 71  DRVLKEEFQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKS-AAPSG 130
            + LKE++  TAYAT +Y+ IGP A  +      + ++++        KST+ S  A S 
Sbjct: 552 QQYLKEDYSFTAYATISYLKIGPKANLLNNEAHAITMQVT--------KSTQNSFRAESS 611

Query: 131 LECKLDKLRKELASMDGGIFPHSVLSTQQIS 154
             C  ++  K++   + G F     +  Q S
Sbjct: 612 QTCHSEQGDKKMEEKNSGNFQKKAANMLQQS 634

[Close]

BLAST of Cmc04g0103511 vs. ExPASy Swiss-Prot
Match: Q5RF63 (ATP-dependent DNA helicase Q1 OS=Pongo abelii OX=9601 GN=RECQL PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.8e-05
Identity = 39/151 (25.83%), Postives = 74/151 (49.01%), Query Frame = 0


Query: 11  HARVIISMLQDVQKSNQKMTMLQLVDKLKAK-------HNDLVSDLRKEEIEQLIVQLLL 70
           + R +I +L+  ++ N+K+T L+L+D    K          +   L +E++E++I   L+
Sbjct: 492 YCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGVVAPTLPREDLEKIIAHFLI 551

Query: 71  DRVLKEEFQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKS-AAPSG 130
            + LKE++  TAYAT +Y+ IGP A  +      + ++++        KST+ S    S 
Sbjct: 552 QQYLKEDYSFTAYATISYLKIGPKANLLNNEAHAITMQVT--------KSTQNSFRVESS 611

Query: 131 LECKLDKLRKELASMDGGIFPHSVLSTQQIS 154
             C  ++  K++   + G F     +  Q S
Sbjct: 612 QTCHSEQGDKKMEEKNSGNFQKKAANMLQQS 634

[Close]

BLAST of Cmc04g0103511 vs. ExPASy Swiss-Prot
Match: Q9Z129 (ATP-dependent DNA helicase Q1 OS=Mus musculus OX=10090 GN=Recql PE=1 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 8.8e-05
Identity = 33/112 (29.46%), Postives = 59/112 (52.68%), Query Frame = 0


Query: 11  HARVIISMLQDVQKSNQKMTMLQLVDKLKAK-------HNDLVSDLRKEEIEQLIVQLLL 70
           H R +I +L+  +  N+K+T L+L+D    K          +   L +E++E+++   LL
Sbjct: 492 HCRDLIKILKQAEGLNEKLTPLKLIDAWMGKGAAKLRVAGVVAPALPREDLERIVAHALL 551

Query: 71  DRVLKEEFQHTAYATNAYVSIGPLARQVLQGKKVVKIEI--SGKQKVTGVKS 114
            + LKE++  TAYAT +Y+ +GP A  +      V +++  S +  V G  S
Sbjct: 552 QQYLKEDYSFTAYATISYLKVGPRACLLSNEAHAVTMQVKKSAQSSVRGALS 603

[Close]

BLAST of Cmc04g0103511 vs. ExPASy TrEMBL
Match: A0A1S3CBZ6 (ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103499236 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 11  HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE 70
           HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE
Sbjct: 414 HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE 473

Query: 71  FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL 130
           FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL
Sbjct: 474 FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL 533

Query: 131 RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS 190
           RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS
Sbjct: 534 RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS 593

Query: 191 IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA 230
           IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA
Sbjct: 594 IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA 632

[Close]

BLAST of Cmc04g0103511 vs. ExPASy TrEMBL
Match: A0A1S3CDP6 (ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103499236 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 11  HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE 70
           HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE
Sbjct: 490 HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE 549

Query: 71  FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL 130
           FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL
Sbjct: 550 FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL 609

Query: 131 RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS 190
           RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS
Sbjct: 610 RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS 669

Query: 191 IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA 230
           IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA
Sbjct: 670 IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA 708

[Close]

BLAST of Cmc04g0103511 vs. ExPASy TrEMBL
Match: A0A0A0L974 (ATP-dependent DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_3G636420 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 6.0e-105
Identity = 207/219 (94.52%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 11  HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE 70
           HARVIIS+LQDVQKSNQKMTMLQLVDKLK KHN LVSDLRKEEIEQLI+QLLLDRVLKEE
Sbjct: 490 HARVIISILQDVQKSNQKMTMLQLVDKLKTKHNGLVSDLRKEEIEQLIIQLLLDRVLKEE 549

Query: 71  FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL 130
           FQHTAYATNAYV++GPLARQVLQGKKVVKIEISGKQKVTGVKS RKS APSGLECKLDKL
Sbjct: 550 FQHTAYATNAYVTVGPLARQVLQGKKVVKIEISGKQKVTGVKSKRKSVAPSGLECKLDKL 609

Query: 131 RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS 190
           RKELAS+DGGIFPHSVLSTQQI VLSAQKPTSLDQLETMIGKVKAEKYGDRILEEI+KWS
Sbjct: 610 RKELASIDGGIFPHSVLSTQQIVVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIEKWS 669

Query: 191 IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA 230
           IGQNPNASEEEQEEDENRTPKRPKTI+THVVIESSDEEA
Sbjct: 670 IGQNPNASEEEQEEDENRTPKRPKTIDTHVVIESSDEEA 708

[Close]

BLAST of Cmc04g0103511 vs. ExPASy TrEMBL
Match: A0A6J1HTR5 (ATP-dependent DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111466807 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.9e-90
Identity = 183/219 (83.56%), Postives = 204/219 (93.15%), Query Frame = 0


Query: 11  HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE 70
           HARVIISMLQDVQK+NQ+MTMLQLVDKLK K ++LVSDLRKEE+EQLI+QLLLDRVLKEE
Sbjct: 489 HARVIISMLQDVQKTNQRMTMLQLVDKLKGKRDELVSDLRKEEMEQLIIQLLLDRVLKEE 548

Query: 71  FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL 130
           FQHTAYATNAY+++GPLARQVLQGKKVVK+EISGKQK+TGVKS RKS A SGLE +LD+L
Sbjct: 549 FQHTAYATNAYITVGPLARQVLQGKKVVKLEISGKQKITGVKSRRKSVASSGLEYRLDEL 608

Query: 131 RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS 190
           RKELAS+DG IFPH+VLSTQQI VLSAQKPTSLDQLETMIGKVKAEKYG+RIL EI+KWS
Sbjct: 609 RKELASIDGDIFPHAVLSTQQIGVLSAQKPTSLDQLETMIGKVKAEKYGNRILGEIEKWS 668

Query: 191 IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA 230
             Q+ NAS+EEQ  DE+R PKRPKTI+THVVIESSDEEA
Sbjct: 669 AAQSQNASQEEQ-GDEDRAPKRPKTIDTHVVIESSDEEA 706

[Close]

BLAST of Cmc04g0103511 vs. ExPASy TrEMBL
Match: A0A6J1HRC8 (DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111466807 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.9e-90
Identity = 183/219 (83.56%), Postives = 204/219 (93.15%), Query Frame = 0


Query: 11  HARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEE 70
           HARVIISMLQDVQK+NQ+MTMLQLVDKLK K ++LVSDLRKEE+EQLI+QLLLDRVLKEE
Sbjct: 467 HARVIISMLQDVQKTNQRMTMLQLVDKLKGKRDELVSDLRKEEMEQLIIQLLLDRVLKEE 526

Query: 71  FQHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKL 130
           FQHTAYATNAY+++GPLARQVLQGKKVVK+EISGKQK+TGVKS RKS A SGLE +LD+L
Sbjct: 527 FQHTAYATNAYITVGPLARQVLQGKKVVKLEISGKQKITGVKSRRKSVASSGLEYRLDEL 586

Query: 131 RKELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWS 190
           RKELAS+DG IFPH+VLSTQQI VLSAQKPTSLDQLETMIGKVKAEKYG+RIL EI+KWS
Sbjct: 587 RKELASIDGDIFPHAVLSTQQIGVLSAQKPTSLDQLETMIGKVKAEKYGNRILGEIEKWS 646

Query: 191 IGQNPNASEEEQEEDENRTPKRPKTINTHVVIESSDEEA 230
             Q+ NAS+EEQ  DE+R PKRPKTI+THVVIESSDEEA
Sbjct: 647 AAQSQNASQEEQ-GDEDRAPKRPKTIDTHVVIESSDEEA 684

[Close]

BLAST of Cmc04g0103511 vs. TAIR 10
Match: AT1G31360.1 (RECQ helicase L2 )

HSP 1 Score: 209.9 bits (533), Expect = 2.1e-54
Identity = 111/218 (50.92%), Postives = 163/218 (74.77%), Query Frame = 0


Query: 12  ARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEEF 71
           +++++SM+Q+ Q  +Q++TMLQL DKL+ KH DL+++L+++E+E L+++L++D VLKEEF
Sbjct: 490 SKLVVSMVQETQAKDQRVTMLQLGDKLRNKHKDLIAELKRDEVEHLVIKLIVDSVLKEEF 549

Query: 72  QHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKLR 131
           QHT Y+TNAYV++GPLA Q+LQG+K +K+E S +Q     K  ++S   SGLE KLD+LR
Sbjct: 550 QHTPYSTNAYVTMGPLANQLLQGRKTIKMETSSRQ----TKKLKRSITFSGLELKLDELR 609

Query: 132 KELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWSI 191
           KE+++ DG I PH+VLSTQQI  +S+QKP SL +LE++IGK+K EKYGDRILEE+ +   
Sbjct: 610 KEISAADGSILPHTVLSTQQIGSISSQKPVSLQELESIIGKLKTEKYGDRILEEVMRHEA 669

Query: 192 GQNPNASEEEQEED-ENRTPKRPKTINTHVVIESSDEE 229
                  +  +EE  ++R  KR KT    V++ESS EE
Sbjct: 670 VSEQLVEDPTKEETCKSRLRKRAKTQKDVVLVESSGEE 703

[Close]

BLAST of Cmc04g0103511 vs. TAIR 10
Match: AT1G31360.2 (RECQ helicase L2 )

HSP 1 Score: 209.9 bits (533), Expect = 2.1e-54
Identity = 111/218 (50.92%), Postives = 163/218 (74.77%), Query Frame = 0


Query: 12  ARVIISMLQDVQKSNQKMTMLQLVDKLKAKHNDLVSDLRKEEIEQLIVQLLLDRVLKEEF 71
           +++++SM+Q+ Q  +Q++TMLQL DKL+ KH DL+++L+++E+E L+++L++D VLKEEF
Sbjct: 365 SKLVVSMVQETQAKDQRVTMLQLGDKLRNKHKDLIAELKRDEVEHLVIKLIVDSVLKEEF 424

Query: 72  QHTAYATNAYVSIGPLARQVLQGKKVVKIEISGKQKVTGVKSTRKSAAPSGLECKLDKLR 131
           QHT Y+TNAYV++GPLA Q+LQG+K +K+E S +Q     K  ++S   SGLE KLD+LR
Sbjct: 425 QHTPYSTNAYVTMGPLANQLLQGRKTIKMETSSRQ----TKKLKRSITFSGLELKLDELR 484

Query: 132 KELASMDGGIFPHSVLSTQQISVLSAQKPTSLDQLETMIGKVKAEKYGDRILEEIDKWSI 191
           KE+++ DG I PH+VLSTQQI  +S+QKP SL +LE++IGK+K EKYGDRILEE+ +   
Sbjct: 485 KEISAADGSILPHTVLSTQQIGSISSQKPVSLQELESIIGKLKTEKYGDRILEEVMRHEA 544

Query: 192 GQNPNASEEEQEED-ENRTPKRPKTINTHVVIESSDEE 229
                  +  +EE  ++R  KR KT    V++ESS EE
Sbjct: 545 VSEQLVEDPTKEETCKSRLRKRAKTQKDVVLVESSGEE 578

The following BLAST results are available for this feature:

BLAST of Cmc04g0103511 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460413.1	2.6e-110	100.00	PREDICTED: mediator of RNA polymerase II transcription subunit 34 isoform X1 [Cu...	[more]
XP_008460415.1	2.6e-110	100.00	PREDICTED: mediator of RNA polymerase II transcription subunit 34 isoform X2 [Cu...	[more]
XP_031738250.1	1.2e-104	94.52	mediator of RNA polymerase II transcription subunit 34 isoform X2 [Cucumis sativ...	[more]
XP_011651674.1	1.2e-104	94.52	mediator of RNA polymerase II transcription subunit 34 isoform X1 [Cucumis sativ...	[more]
XP_038887820.1	9.5e-97	89.04	LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 2 [Benincasa hispida]	[more]

BLAST of Cmc04g0103511 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FT73	3.0e-53	50.92	ATP-dependent DNA helicase Q-like 2 OS=Arabidopsis thaliana OX=3702 GN=RECQL2 PE...	[more]
Q6AYJ1	9.5e-07	29.32	ATP-dependent DNA helicase Q1 OS=Rattus norvegicus OX=10116 GN=Recql PE=1 SV=1	[more]
P46063	6.1e-06	26.49	ATP-dependent DNA helicase Q1 OS=Homo sapiens OX=9606 GN=RECQL PE=1 SV=3	[more]
Q5RF63	1.8e-05	25.83	ATP-dependent DNA helicase Q1 OS=Pongo abelii OX=9601 GN=RECQL PE=2 SV=1	[more]
Q9Z129	8.8e-05	29.46	ATP-dependent DNA helicase Q1 OS=Mus musculus OX=10090 GN=Recql PE=1 SV=2	[more]

BLAST of Cmc04g0103511 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBZ6	1.2e-110	100.00	ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103499236 PE=3 SV=1	[more]
A0A1S3CDP6	1.2e-110	100.00	ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103499236 PE=3 SV=1	[more]
A0A0A0L974	6.0e-105	94.52	ATP-dependent DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_3G636420 PE=3 SV=1	[more]
A0A6J1HTR5	1.9e-90	83.56	ATP-dependent DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111466807 PE=3 SV=1	[more]
A0A6J1HRC8	1.9e-90	83.56	DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111466807 PE=3 SV=1	[more]

BLAST of Cmc04g0103511 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31360.1	2.1e-54	50.92	RECQ helicase L2	[more]
AT1G31360.2	2.1e-54	50.92	RECQ helicase L2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 222..229
None	No IPR available	COILS	Coil	Coil	coord: 35..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..229
None	No IPR available	PANTHER	PTHR13710	DNA HELICASE RECQ FAMILY MEMBER	coord: 10..201
None	No IPR available	PANTHER	PTHR13710:SF72	ATP-DEPENDENT DNA HELICASE Q1	coord: 10..201
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 9..104 e-value: 9.5E-24 score: 85.4
IPR044876	HRDC domain superfamily	GENE3D	1.10.150.80	HRDC domain	coord: 121..189 e-value: 3.0E-12 score: 48.1
IPR002121	HRDC domain	PFAM	PF00570	HRDC	coord: 126..186 e-value: 4.2E-10 score: 39.5
IPR002121	HRDC domain	PROSITE	PS50967	HRDC	coord: 117..196 score: 12.050076
IPR018982	RQC domain	PFAM	PF09382	RQC	coord: 14..106 e-value: 8.9E-6 score: 25.5
IPR010997	HRDC-like superfamily	SUPERFAMILY	47819	HRDC-like	coord: 123..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0103511.1	Cmc04g0103511.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006268	DNA unwinding involved in DNA replication
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005694	chromosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0043138	3'-5' DNA helicase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0009378	four-way junction helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding