Cmc04g0103401 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0103401
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	CMiso1.1chr04: 20470126 .. 20475563 (+)
RNA-Seq Expression	Cmc04g0103401
Synteny	Cmc04g0103401

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCAATTTCATCCCTCTAAATCCCTCAATTAACACATTACCCACCATCCACCATCCATTTTGCCCGGCACCTTCCACCGCCGTCACACCATGCTCGGAAAATTTCTCCGCCCGATTGTCTCATCTTCCCGCAGTCCCCATCTCTTTTCATCACCATTTCAATCACTTCTCAACCCCATTCTTCCATCCCATCTCCACCCCCGTTTTCTTTGCTCCCTGTCACCACCATCATCCGCTTTTCTTCCTCCTCAAGACTCCGACAACCTCAATCTCCCAATCCCAAAAGTTCGAACCCAAACTCCTCTCGAGAAGCAATTCGAATCATGGGTTCAGAAGCTCAAGCCCGGTTTCTCCCCTTCAGACGTCATCGAGGCTCTACAAGCCCAGTCCGACCCGGATCTCGCCCTCGACCTTTTCCGGTGGACGGCGCTGCAGCGAGGCTACAAACACAACGACTTAACTTATCTAACAATCATTAAGATCCTCATTTCCTGCCGGAGATACCACCTCGCTCAAACCCTAGTTGAAGAGGTAATTGCTGGTGCTTGTGAAATGAGTGTGCCGCTTTACAACTCTGTAATTAGGTTCTGCTGTGGCCGGAAAACTCGGTTCAATCGAGCTTTTGATGTGTACAAGAAAATGTGGAAATCTGATGACTGTAAACCCACGCTTGAAACTTATGCAATGCTGTTCAATTCACTGCTTAGGAGATTCAATAAGTTGAATGTTTCTTATGTTTATTTACATTCGGTTCGTTCGTTAACGAAGCAAATGAAATCGTCTGGTGTGATTCCCGATACTTTTGTGTTGAACATGATCATTAAAGCATATTCTAAGTGTCTTGAAGTTGATGAAGCGATTCGGGTTTTTCGAGAAATGGGGTTGTATGCTTGCCAACCGAATTCGTATACTTATGGCTACATTGCAAAAGGGTTGTGTGAGAAAGGAAGAGTTGAAGAAGGGTTGGAATTTTACAAGGAAATGAGAGTTAGAGGCCTGATTCCCAGTAGCAGCACTTATATGATTTTGATTTGTAGTCTAGCAATGGAACGCAGATTTGAGGAAGCTATTGAGATTTGTTTCGATATGTTGTGTAATTCTATGGCACCGGATTTGCTTACTTACAGAACCTTGTTAGAAGGATTATGTCGGGAGGGACGGGATAGCGAAGCATTTGATTTACTTGATGAGTTGAGGAAGAGGGATAAACTGATGAGTGAGAAAACATTCAAGATTCTATTAAATGGACTGCACACTGTTGGTAGAGATAGTTTGTGAGGATTGTCCACTGCATATTCCATTGAATTTCTTAGCTTGGTTCTATGCAGGTTAACCATTTTGGATTAGATCTTGAGTCAGTCTTCTGAATGCTGGATCGAATTTTGTTACTGAACCTTTAAAATTTCACTATCTATTTAGCTTGTTTAGAAGCGAAATGTTGAAGAGAGCAATTCCACTATTCTAGGTCAAATGAACTAAGCACTGGTTATTTGATAGCTGGTGGTTTTGTAATGGAAGCTCCACTCTGCACTTGTAATTATCTATGGAGAGGTGTAAGGATGGACGGAGCATTAGATCTTGAACAATTCTCTAAATGCTGGAATGCATTTTATTACTGAACCTTGAAACTTTCAGGATCCATTAGCCTTGTTTAGACGCGAAATGTGTAGATATTGACTTCTTGGTTCTAGGTCAAATGGACTATGCATTGAATCGACTGGTTATGGATGCTTGTAGAACCCTCAAGCTCTTGTAGGTGGAGGTTTGGTAATGGAAGGCTCACACCCTATGCTGCTGCAACTCTTGGTCGTCTGGATTATGTGTGCTTTCTTCTAAACTGAATCAGTCCACATTCGGAATCCAAAACAAGCCACCGGGTAAGTGTTATAGAGACATAAATGTTGATTCTCTGCTCTTGTTATTACGAACTATTGGATTTGATGTATGGTGGTGCGTCTACAACCAAATTCTCATCTTTGGTGTTTTTCCAGCCTTAGCCACCTTTTTTTTTTTTTTTTTTTTAATATTAATTGTAATAATGGTTAAAATTTTATATTTATTCACTTTGTTAAAAAGAAAAAGGTAAATTTTTTTTTTGTAATATTATATGATCTTATGATAATTGCTGTTGTTATTATTATTTTTAAAATCTTTTATTAAAAGGAAAAATAAAAAAATATCTATTTTTTAAAAAAAAATAAAAAAAATAATTTATTATTTTAGAAAAAACAAAATATTTTATTTTATACAAAATCTTTTAATATTATATTTGATTTATCATTATAGAAAAAACAGAATAATTTATTTTATACAAAATTTCTTTAATTTATCCTTAAGAAAAAGTAAATAAATTTATTTGGGATAAAATCTTTCGATATCATGTTTTTATTATTTAAAAAAAAATTAATAAATTTATACAATATCTAATTTGATTTTATACTTAATAAAATTTTCTAATTTGTAGTGCTATAAGTAAAAACATTTGGAGATTGAAAAGGGAGAAAAAATTGGAAAATTTGTACTAAGAAAATTTCTACGAAAAGAGAATCTTTACAATTTTTGTTAAGAAACCTATTTCTTAAAGAAAAAGGGTTTATTTTTTCGTTTCATTGTTTTTATTTTTATTTATTTATTTGTCTATTTTTTTCTTTACCCTAAATCTAATCCTATAAATGAAAAACTTAGTTGAAGGTTGCATTAGTCGGAAATTTATTTTCAATGATCCACGCCTCATCAACAAAGCAATTTCTTCGAAATTAAATTTTTATTTTTATTCTTTTCTTATTTAAACATAGAGAGAGAAAAAATGTATAAGAAAAATTCTTTTTTTCTTTTTGCTACATTTTAAAAGAAGAGACTTTTAACCCTTTTCTTCTTTCTAAAAAATAGTTTCTTTTAGGGTGGACCCTATTTCCCTTTTTTTTTCTTTTTCTTTAATTAATTTATTTACTTATTTAAGTTTAATTTTATTTATAATTTTGTTTTATTATTATTATTATTGCCATATTTATTATTATTATTATTATTATATATCTTTCTTTTCTTTTAATGTGATGGCAATCTTGTTTTTTTTTTTTTTAATTTTTATATATAAAATTTTTATTTATTTATTTAGTTTTTTATATTTATAATTTTTTAACTTCTTATTATTTTTATTATTATTATTTTATGAAAAACTTTTTTGAATATAACAAATTAATGAAATATTTATCGTCGGAAAACAAAGTCCATAAAGTTAATTATTTTTTTAAATATTTTACGTTTGTTTTCTTATCTTTTTCTCTTTTTATCGTAGCTGCGATTCTTTTCATTTTTTTTTTAAGATCTAGGTAACCACCTTTCTTATTTATTTTTTCTTTTTTAGGTGCGTCTTTCTTCTTCTTTTTTTTTTTTTTTTCATTTAATTCACTGCATAATAGTATTGTCTTTCTTCTTTTTTTTAGGTTAGTAACATAAGGATGATATATAAATAATCTTGAAAAAATTGGTTTTGCATTTAAATTAAGGGAACAAAAACTAAAAGATTATGTATAAAGAATATTGAAAAAAATCCTTTATACTAAATTGATTACGTATAATCGTTTAAATTTGGAACTTCAAATCTCGTATATCAATTTTTTTTAAAAGGTAGTCAAATCTAAACGATCGTGTAATTTAATTAATTAAACAATCGTGTATCAAACAATAGTCAAATCTAAACGATCGTGTACCAAATCACGTTTTCAATATATTACGCGTATTGTTGACGGGATATTTTTGGTATTTTATGCGGTGGGCTTCTGAGATTTTTTCATTTTCGAAATTGTTCTATAGTGTAAGTATTTTGTTGTTTTTTATATTTTTGAAAAGATCGTCATCCCTCTTATATATTTCTTTTAGTTCTTTTTTCTGTTGTTTTCTTTTCTGTTGTTTTTTTTATTTTATTTATCGTTATTATGTCTTTCTTTTCCTTTCTCTTTTAATTTATTTTTCATTACTATCGTTATATTTAGTATATCCATGCATTAATATCTTAAATTATTTACCTAATTTTATTGTGTGATATATTTGATTCCTGATGTGTTATTTTTATTTGACCTTCATTATAAATTTCTTGAAAATTTTAAAATAATTTTAACTATGATTGCATGTAATTTTGAAATATTTTTTAAATTTTTATGATTTTTTTTGCTTTAAAATTATTTCTTTTAAACTCATAATTAAACATATATTTCATAAGGTTTTCTAATCCTATAATGGAATCTAGAAATTTTGGGGGTCCGTTATTTCTAGATTCTTGAGGTGAGTGATAAATATCTTTTAGAGTTCGAGATTTGTTGCCAAGAAAAAATATATTTAATCAATGTTTTCAAAACAAATTTTTCTTCGAAAACTAGGTTACGATAGAATTTGAAAAATTATAATAATTTTTCATTTTTTTGAGGTGATGAATCTTTCTTCTATATAGTTTACTTAATGTGTGTATCCCATCTATTTTATGGGATTATTGTTTCAAATATTTTTCTGATGTAAAATAAGATATAATATTTTATAAAAAAAATGAATTTTATTCTAGACATTAAATTTGACCATCGTTATGAGGAGCTAACATATTTCTTATACACAAATGACTCACGAACTGAACTCTAATTTTTTCGTAGATCAGATTTTATTTTATTTAAAATAATTTATTTTATTTTAGCGTCCAATCACACCAAAAAAGGATCGGTGGCGACTCTCATTTTTTTATTTTAAAATTAAATCTTTTTAAGGATGCCGGTCACTTTGCATTGTCCTGGTACATGGCGACACGTCTTTAGAATAAGGAAGAGTAGGGTCTTACGTCGAACTAGAGCCTTTTAATATTGGTGCTAGCGAGGTTCGAGACAGCCGAAGATGGGTTTCTTGAAGAAAAGATTGCCTGAACGGGGAGGTAGCTACAGAGTCACCATTTTAGATCATCTTCAAGGGATAAGATCTACATCCTCTCACTGGAATGATTATCGAAGTGGGTTGGTAATGGTTGCTTTCTATTTATTTTTGGAATTTTAGGCCCAATTATTGCCTTAATTTCCTGTTTCGTTTGCTTTCTTTTAACTTCTTTTGTTTATTTTGTGATAGTAATGGAAGGGTTTTCACCGACAATGTTAAAAGGTTTACCTCCATTTTGGTGAAGTGCTTAAAATAGCAAGAGCTCTCTGTCTCACTAATATTCCGATTAATCCAACCACCGACGACTACTTTTGTGACCGAATTTGGTTGTCATCTCTTGTGGCCAACTTGAGACCACTATTGATGACCACCTCCATGTGATGACCAGATAGCTCTAATGGCTATTTTTAGTGGCCAATTTTGACAATCACCTATGCTAGCAACCTACGTGACAACTCGGTGACCATCTTTGAAAATTATTTTGTGCCAAACTTTAGCAAAAACTATCTTTTCTAAATCAAATTTT

mRNA sequence

TTTTCAATTTCATCCCTCTAAATCCCTCAATTAACACATTACCCACCATCCACCATCCATTTTGCCCGGCACCTTCCACCGCCGTCACACCATGCTCGGAAAATTTCTCCGCCCGATTGTCTCATCTTCCCGCAGTCCCCATCTCTTTTCATCACCATTTCAATCACTTCTCAACCCCATTCTTCCATCCCATCTCCACCCCCGTTTTCTTTGCTCCCTGTCACCACCATCATCCGCTTTTCTTCCTCCTCAAGACTCCGACAACCTCAATCTCCCAATCCCAAAAGTTCGAACCCAAACTCCTCTCGAGAAGCAATTCGAATCATGGGTTCAGAAGCTCAAGCCCGGTTTCTCCCCTTCAGACGTCATCGAGGCTCTACAAGCCCAGTCCGACCCGGATCTCGCCCTCGACCTTTTCCGGTGGACGGCGCTGCAGCGAGGCTACAAACACAACGACTTAACTTATCTAACAATCATTAAGATCCTCATTTCCTGCCGGAGATACCACCTCGCTCAAACCCTAGTTGAAGAGGTAATTGCTGGTGCTTGTGAAATGAGTGTGCCGCTTTACAACTCTGTAATTAGGTTCTGCTGTGGCCGGAAAACTCGGTTCAATCGAGCTTTTGATGTGTACAAGAAAATGTGGAAATCTGATGACTGTAAACCCACGCTTGAAACTTATGCAATGCTGTTCAATTCACTGCTTAGGAGATTCAATAAGTTGAATGTTTCTTATGTTTATTTACATTCGGTTCGTTCGTTAACGAAGCAAATGAAATCGTCTGGTGTGATTCCCGATACTTTTGTGTTGAACATGATCATTAAAGCATATTCTAAGTGTCTTGAAGTTGATGAAGCGATTCGGGTTTTTCGAGAAATGGGGTTGTATGCTTGCCAACCGAATTCGTATACTTATGGCTACATTGCAAAAGGGTTGTGTGAGAAAGGAAGAGTTGAAGAAGGGTTGGAATTTTACAAGGAAATGAGAGTTAGAGGCCTGATTCCCAGTAGCAGCACTTATATGATTTTGATTTGTAGTCTAGCAATGGAACGCAGATTTGAGGAAGCTATTGAGATTTGTTTCGATATGTTGTGTAATTCTATGGCACCGGATTTGCTTACTTACAGAACCTTGTTAGAAGGATTATGTCGGGAGGGACGGGATAGCGAAGCATTTGATTTACTTGATGAGTTGAGGAAGAGGGATAAACTGATGAGTGAGAAAACATTCAAGATTCTATTAAATGGACTGCACACTGTTGGTAGAGATAGTTTGTGAGGATTGTCCACTGCATATTCCATTGAATTTCTTAGCTTGGTTCTATGCAGGTTAACCATTTTGGATTAGATCTTGAGTCAGTCTTCTGAATGCTGGATCGAATTTTGTTACTGAACCTTTAAAATTTCACTATCTATTTAGCTTGTTTAGAAGCGAAATGTTGAAGAGAGCAATTCCACTATTCTAGGTCAAATGAACTAAGCACTGGTTATTTGATAGCTGGTGGTTTTGTAATGGAAGCTCCACTCTGCACTTGTAATTATCTATGGAGAGGTGTAAGGATGGACGGAGCATTAGATCTTGAACAATTCTCTAAATGCTGGAATGCATTTTATTACTGAACCTTGAAACTTTCAGGATCCATTAGCCTTGTTTAGACGCGAAATGTGTAGATATTGACTTCTTGGTTCTAGGTCAAATGGACTATGCATTGAATCGACTGGTTATGGATGCTTGTAGAACCCTCAAGCTCTTGTAGGTGGAGGTTTGGTAATGGAAGGCTCACACCCTATGCTGCTGCAACTCTTGGTCGTCTGGATTATGTGTGCTTTCTTCTAAACTGAATCAGTCCACATTCGGAATCCAAAACAAGCCACCGGGATGCCGGTCACTTTGCATTGTCCTGGTACATGGCGACACGTCTTTAGAATAAGGAAGAGTAGGGTCTTACGTCGAACTAGAGCCTTTTAATATTGGTGCTAGCGAGGTTCGAGACAGCCGAAGATGGGTTTCTTGAAGAAAAGATTGCCTGAACGGGGAGGTAGCTACAGAGTCACCATTTTAGATCATCTTCAAGGGATAAGATCTACATCCTCTCACTGGAATGATTATCGAAGTGGGTTGGTAATGGTTGCTTTCTATTTATTTTTGGAATTTTAGGCCCAATTATTGCCTTAATTTCCTGTTTCGTTTGCTTTCTTTTAACTTCTTTTGTTTATTTTGTGATAGTAATGGAAGGGTTTTCACCGACAATGTTAAAAGGTTTACCTCCATTTTGGTGAAGTGCTTAAAATAGCAAGAGCTCTCTGTCTCACTAATATTCCGATTAATCCAACCACCGACGACTACTTTTGTGACCGAATTTGGTTGTCATCTCTTGTGGCCAACTTGAGACCACTATTGATGACCACCTCCATGTGATGACCAGATAGCTCTAATGGCTATTTTTAGTGGCCAATTTTGACAATCACCTATGCTAGCAACCTACGTGACAACTCGGTGACCATCTTTGAAAATTATTTTGTGCCAAACTTTAGCAAAAACTATCTTTTCTAAATCAAATTTT

Coding sequence (CDS)

ATGCTCGGAAAATTTCTCCGCCCGATTGTCTCATCTTCCCGCAGTCCCCATCTCTTTTCATCACCATTTCAATCACTTCTCAACCCCATTCTTCCATCCCATCTCCACCCCCGTTTTCTTTGCTCCCTGTCACCACCATCATCCGCTTTTCTTCCTCCTCAAGACTCCGACAACCTCAATCTCCCAATCCCAAAAGTTCGAACCCAAACTCCTCTCGAGAAGCAATTCGAATCATGGGTTCAGAAGCTCAAGCCCGGTTTCTCCCCTTCAGACGTCATCGAGGCTCTACAAGCCCAGTCCGACCCGGATCTCGCCCTCGACCTTTTCCGGTGGACGGCGCTGCAGCGAGGCTACAAACACAACGACTTAACTTATCTAACAATCATTAAGATCCTCATTTCCTGCCGGAGATACCACCTCGCTCAAACCCTAGTTGAAGAGGTAATTGCTGGTGCTTGTGAAATGAGTGTGCCGCTTTACAACTCTGTAATTAGGTTCTGCTGTGGCCGGAAAACTCGGTTCAATCGAGCTTTTGATGTGTACAAGAAAATGTGGAAATCTGATGACTGTAAACCCACGCTTGAAACTTATGCAATGCTGTTCAATTCACTGCTTAGGAGATTCAATAAGTTGAATGTTTCTTATGTTTATTTACATTCGGTTCGTTCGTTAACGAAGCAAATGAAATCGTCTGGTGTGATTCCCGATACTTTTGTGTTGAACATGATCATTAAAGCATATTCTAAGTGTCTTGAAGTTGATGAAGCGATTCGGGTTTTTCGAGAAATGGGGTTGTATGCTTGCCAACCGAATTCGTATACTTATGGCTACATTGCAAAAGGGTTGTGTGAGAAAGGAAGAGTTGAAGAAGGGTTGGAATTTTACAAGGAAATGAGAGTTAGAGGCCTGATTCCCAGTAGCAGCACTTATATGATTTTGATTTGTAGTCTAGCAATGGAACGCAGATTTGAGGAAGCTATTGAGATTTGTTTCGATATGTTGTGTAATTCTATGGCACCGGATTTGCTTACTTACAGAACCTTGTTAGAAGGATTATGTCGGGAGGGACGGGATAGCGAAGCATTTGATTTACTTGATGAGTTGAGGAAGAGGGATAAACTGATGAGTGAGAAAACATTCAAGATTCTATTAAATGGACTGCACACTGTTGGTAGAGATAGTTTGTGA

Protein sequence

MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLNLPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKHNDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDVYKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRVRGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRKRDKLMSEKTFKILLNGLHTVGRDSL

Homology

[Close]

BLAST of Cmc04g0103401 vs. NCBI nr
Match: XP_016902527.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucumis melo] >KAA0068094.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK26076.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 797.7 bits (2059), Expect = 4.4e-227
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0


Query: 1   MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60
           MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN
Sbjct: 1   MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120
           LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH
Sbjct: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120

Query: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180
           NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV
Sbjct: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300
           NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV
Sbjct: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE
Sbjct: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360

Query: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRDSL 396
           AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRDSL
Sbjct: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRDSL 395

[Close]

BLAST of Cmc04g0103401 vs. NCBI nr
Match: XP_004144398.1 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucumis sativus] >KGN58385.1 hypothetical protein Csa_002386 [Cucumis sativus])

HSP 1 Score: 749.6 bits (1934), Expect = 1.4e-212
Identity = 373/393 (94.91%), Postives = 379/393 (96.44%), Query Frame = 0


Query: 1   MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60
           ML KFLRPI+SS R PHLFSSPFQSLLNPILPSHLH RFLCSLSPPSSA LPPQ+SDNLN
Sbjct: 1   MLSKFLRPILSSCRRPHLFSSPFQSLLNPILPSHLHHRFLCSLSPPSSALLPPQNSDNLN 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120
           LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDV EALQAQSDPDLALDLFRWTA QRGYKH
Sbjct: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120

Query: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180
           N LTYLTIIKILI  RR HLA+TLVEEVIAGACEMSVPLYNSVIRFCC RK RFNRAFDV
Sbjct: 121 NHLTYLTIIKILIYRRRCHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKPTLETYAMLFNSLLRRFNKL+VSYVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300
           NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVE+GLEFYKEMRV
Sbjct: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE
Sbjct: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360

Query: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRD 394
           AFDLLDELRKRDKLM+EKTFK LLNGLHTVGRD
Sbjct: 361 AFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD 393

[Close]

BLAST of Cmc04g0103401 vs. NCBI nr
Match: XP_038888802.1 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Benincasa hispida])

HSP 1 Score: 717.6 bits (1851), Expect = 5.8e-203
Identity = 356/393 (90.59%), Postives = 372/393 (94.66%), Query Frame = 0


Query: 1   MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60
           MLGKFLRPI+S+SR  H FSSPFQSLLNPILPSHLH RFLC  SPPSS  +P Q+SDNLN
Sbjct: 1   MLGKFLRPILSASRRRHPFSSPFQSLLNPILPSHLHRRFLC--SPPSSTVIPSQNSDNLN 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120
           LPIPK+R+QTPLEKQFE+WVQKLKPGFSPSDV EALQAQSDPDLALDLFRWTA QRGYKH
Sbjct: 61  LPIPKIRSQTPLEKQFETWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120

Query: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180
           NDLTYLTIIKILIS RRYHLA+TLVEEV+AGACEMSVPLYNSVIRFCC RK  FNRAFDV
Sbjct: 121 NDLTYLTIIKILISRRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCSRKFLFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNV YVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVCYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300
           NMIIKAYSKCLEVDEAIRVFREMGLY C+PN+YTYGYIAKGLCEKGRV +GLEFYKEMRV
Sbjct: 241 NMIIKAYSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           + L+PSSSTYMILICSLAMERRFEEAIEICFDML NSMAPDLLTYRTLLEGLCREGRDSE
Sbjct: 301 KRLLPSSSTYMILICSLAMERRFEEAIEICFDMLSNSMAPDLLTYRTLLEGLCREGRDSE 360

Query: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRD 394
           AFDLLDELRKRDKLM++KTFKILLNGLH VGRD
Sbjct: 361 AFDLLDELRKRDKLMNQKTFKILLNGLHIVGRD 391

[Close]

BLAST of Cmc04g0103401 vs. NCBI nr
Match: KAG7036236.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 675.2 bits (1741), Expect = 3.3e-190
Identity = 332/393 (84.48%), Postives = 359/393 (91.35%), Query Frame = 0


Query: 1   MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60
           M+GKFLRP++S+SR  +  SS FQSL NPILP +LH R LC  SP +S  LPPQ  +N +
Sbjct: 1   MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLC--SPSASTVLPPQTPENFD 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120
           LPIPKVR+QTPLEKQFE+W+QKLKPGFSPSDV EALQAQSDPDLALDLFRWTA QRGYKH
Sbjct: 61  LPIPKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120

Query: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180
           NDLTYLTIIKILI CRRYHLA+TLVEEV+AGACEMSVPLYNSVIRFCCGRK  FNRAFDV
Sbjct: 121 NDLTYLTIIKILICCRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKP LETYAMLFN+LLRRFNKLNV YVYLHSVRSL KQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLAKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300
           NMIIKA+SKCLEVDEAIRVFREMGLY C+PN+YTYGYIAKGLCEKGRV +GLEFYKEMRV
Sbjct: 241 NMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           +GL PSSSTYMILICSLAME RF+EAIE+CFDML  S APD+LTYRTLLEGLCREGRDS+
Sbjct: 301 KGLFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSD 360

Query: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRD 394
           AFDLLDEL+KRDKLM+EKTF ILLNGLH VGR+
Sbjct: 361 AFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE 391

[Close]

BLAST of Cmc04g0103401 vs. NCBI nr
Match: XP_022995354.1 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucurbita maxima])

HSP 1 Score: 674.5 bits (1739), Expect = 5.7e-190
Identity = 333/393 (84.73%), Postives = 358/393 (91.09%), Query Frame = 0


Query: 1   MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60
           M+GKFLRP++S+SR  +  SSPFQSL NPILP +LH R LCS SP  S  LP Q  +N +
Sbjct: 1   MIGKFLRPVLSASRKRNPLSSPFQSLPNPILPYNLHRRSLCSPSPSPSTVLPSQPPENFS 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120
           LPI KVR+QTPLEKQFE+WVQKLKPGFSPSDV EALQAQSDPDLALDLFRWTA QRGYKH
Sbjct: 61  LPIQKVRSQTPLEKQFETWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120

Query: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180
           NDLTYLTIIKILI  RRYHLA+TLVEEV+AGACEMSVPLYNSVIRFCCGR+  FNRAFDV
Sbjct: 121 NDLTYLTIIKILICRRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRRFLFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKP LETYAMLFNSLLRRFNKLNV YVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPNLETYAMLFNSLLRRFNKLNVCYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300
           NMIIKA+SKCLEVDEAIRVFREMGLY C+PN+YTYGYIAKGLCEKGRV +GLEFYKEMRV
Sbjct: 241 NMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           +GL PSSSTYMILICSLAME RF+EAIE+CFDML  S APD+LTYRTLLEGLCREGRDS+
Sbjct: 301 KGLSPSSSTYMILICSLAMEGRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSD 360

Query: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRD 394
           AFDLLDEL+KRDKLM+EKTF ILLNGLH VGR+
Sbjct: 361 AFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE 393

[Close]

BLAST of Cmc04g0103401 vs. ExPASy Swiss-Prot
Match: Q9LSF5 (Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g25210 PE=2 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 1.2e-131
Identity = 233/384 (60.68%), Postives = 297/384 (77.34%), Query Frame = 0


Query: 9   IVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLNLPIPKVRT 68
           + S++RS +L S PF S       +HL   F    S P S   P            ++RT
Sbjct: 11  LTSTNRSRNL-SPPFLS----TAVNHLSLSFSSVSSSPESHTSP-----------SRIRT 70

Query: 69  QTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKHNDLTYLTI 128
           +TPLE QFE+W+Q LKPGF+ SDV+ AL+AQSDPDLALD+FRWTA QRGYKHN   Y T+
Sbjct: 71  RTPLETQFETWIQNLKPGFTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTM 130

Query: 129 IKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDVYKKMWKSD 188
           IK  I+ +R +  +TL+EEVIAGACEMSVPLYN +IRFCCGRK  FNRAFDVY KM +SD
Sbjct: 131 IKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSD 190

Query: 189 DCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYS 248
           D KP LETY +L +SLL+RFNKLNV YVYLH+VRSLTKQMKS+GVIPDTFVLNMIIKAY+
Sbjct: 191 DSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYA 250

Query: 249 KCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRVRGLIPSSS 308
           KCLEVDEAIRVF+EM LY  +PN+YTY Y+ KG+CEKGRV +GL FYKEM+V+G++P+ S
Sbjct: 251 KCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGS 310

Query: 309 TYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDEL 368
            YM+LICSL+MERR +EA+E+ +DML NS++PD+LTY T+L  LCR GR SEA ++++E 
Sbjct: 311 CYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEW 370

Query: 369 RKRDKLMSEKTFKILLNGLHTVGR 393
           +KRD +M E+ ++ L++ ++ + +
Sbjct: 371 KKRDPVMGERNYRTLMDEVYFLNK 378

[Close]

BLAST of Cmc04g0103401 vs. ExPASy Swiss-Prot
Match: Q9ZUY1 (Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g27800 PE=3 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 5.2e-53
Identity = 108/317 (34.07%), Postives = 189/317 (59.62%), Query Frame = 0


Query: 75  QFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKHNDLTYLTIIKILIS 134
           +F   + KL P F+P ++ +A+  + DP L   LF W + Q  + H + +Y   I+ L +
Sbjct: 125 KFHETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGA 184

Query: 135 CRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDVYKKM--WKSDDCKP 194
            + Y     +V +V++     +  LYNS+I F   +  +  RA ++++ M   K+ +C+P
Sbjct: 185 AKMYQEMDDIVNQVLSVRHIGNENLYNSII-FYFTKAGKLIRAVNIFRHMVTSKNLECRP 244

Query: 195 TLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSKCLE 254
           T+ TY +LF +LL R N   +++VY+ +VRSL +QM  SG+ PD F LN ++K Y   L 
Sbjct: 245 TIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLH 304

Query: 255 VDEAIRVFREMG-LYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRVRGLIPSSSTYM 314
           V++A+R+F +M  +Y C+PNS+TY Y+  GLC +GR     E   EM+ +G +P+  +Y 
Sbjct: 305 VNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYN 364

Query: 315 ILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRKR 374
            L+ + A+    ++A++  ++M+ N    D ++YRTL++  CR+G+  EA  LL+ LR++
Sbjct: 365 SLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 424

Query: 375 DKLMSEKTFKILLNGLH 389
            +L+   ++  L+N LH
Sbjct: 425 -QLVDRDSYDKLVNVLH 439

[Close]

BLAST of Cmc04g0103401 vs. ExPASy Swiss-Prot
Match: Q9FNL2 (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX=3702 GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.1e-31
Identity = 89/312 (28.53%), Postives = 160/312 (51.28%), Query Frame = 0


Query: 82  KLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQ--RGYKHNDLTYLTIIKILISCRRYH 141
           K     +PS VI+ ++A+ D + ++ +F     +   GY H+  ++  ++  L+S  ++ 
Sbjct: 9   KWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFK 68

Query: 142 LAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFD---VYKKMWKSDDCKPTLET 201
            A+ L+  +    C +S  +  S+    C    R +R FD   V+ KM K  DC P+ + 
Sbjct: 69  AAEDLIVRMKIENCVVSEDILLSI----CRGYGRVHRPFDSLRVFHKM-KDFDCDPSQKA 128

Query: 202 YAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSK-CLEVDE 261
           Y  +  ++L   N+LN+++ +        K M+  G+ P    LN++IKA  +    VD 
Sbjct: 129 YVTVL-AILVEENQLNLAFKFY-------KNMREIGLPPTVASLNVLIKALCRNDGTVDA 188

Query: 262 AIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRVRGLIPSSSTYMILIC 321
            +++F EM    C P+SYTYG +  GLC  GR++E  + + EM  +   P+  TY  LI 
Sbjct: 189 GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLIN 248

Query: 322 SLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRKRDKLM 381
            L   +  +EA+    +M    + P++ TY +L++GLC++GR  +A +L + +  R    
Sbjct: 249 GLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP 307

Query: 382 SEKTFKILLNGL 388
           +  T+  L+ GL
Sbjct: 309 NMVTYTTLITGL 307

[Close]

BLAST of Cmc04g0103401 vs. ExPASy Swiss-Prot
Match: P0C894 (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.4e-29
Identity = 94/364 (25.82%), Postives = 168/364 (46.15%), Query Frame = 0


Query: 72  LEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKHNDLTYLTIIKI 131
           LEK F+     L P + P  ++E    + DP LA   F+W+  + G+KH+  +Y  +  I
Sbjct: 98  LEKLFD---LTLAPIWVPRVLVE---LKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHI 157

Query: 132 LISCRRYHLAQTLVEEVI-----------------------------------AGACEMS 191
           L   R Y+ A ++++E++                                    G  E +
Sbjct: 158 LFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEA 217

Query: 192 VPLYNSVIRFCCGRKTR-FNRAFDVYKKMWKSDDCK------------PTLETYAMLFNS 251
           +  ++ + RF    KTR  N     + K+ K+DD K            PT+ TY ++ + 
Sbjct: 218 IQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDC 277

Query: 252 LLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSKCLEVDEAIRVFREM 311
           + +  +        + + R L ++MK  G++PDT   N +I  + K   +D+ +  F EM
Sbjct: 278 MCKEGD--------VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 337

Query: 312 GLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRVRGLIPSSSTYMILICSLAMERRF 371
               C+P+  TY  +    C+ G++  GLEFY+EM+  GL P+  +Y  L+ +   E   
Sbjct: 338 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 397

Query: 372 EEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRKRDKLMSEKTFKIL 388
           ++AI+   DM    + P+  TY +L++  C+ G  S+AF L +E+ +     +  T+  L
Sbjct: 398 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 447

[Close]

BLAST of Cmc04g0103401 vs. ExPASy Swiss-Prot
Match: Q9LR67 (Pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g03560 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 8.3e-27
Identity = 94/375 (25.07%), Postives = 165/375 (44.00%), Query Frame = 0


Query: 53  PQDSDNLNLPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWT 112
           P  S  LNL       ++ L+     ++ KL P F  S V+++ + +  PD+A   F W+
Sbjct: 84  PWVSQILNLLDGSASMESNLDGFCRKFLIKLSPNF-VSFVLKSDEIREKPDIAWSFFCWS 143

Query: 113 ALQRGYKHNDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKT 172
             Q+ Y HN   Y++++ +L   +     + +  E+      M+V   N++I+   G+  
Sbjct: 144 RKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIK-SFGKLG 203

Query: 173 RFNRAFDVYKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSG 232
                  V++KM K +  +PTL TY  L N L        VS +++ S   + + M+S  
Sbjct: 204 MVEELLWVWRKM-KENGIEPTLYTYNFLMNGL--------VSAMFVDSAERVFEVMESGR 263

Query: 233 VIPDTFVLNMIIKAYSKCLEVDEAIRVFREMG--------------LYACQPNS------ 292
           + PD    N +IK Y K  +  +A+   R+M               + AC  +S      
Sbjct: 264 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 323

Query: 293 ---------------YTYGYIAKGLCEKGRVEEGLEFYKEMRVRGLIPSSSTYMILICSL 352
                          + +  +  GLC++G++ EG   ++ M  +G  P+ + Y +LI   
Sbjct: 324 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 383

Query: 353 AMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRKRDKLMSE 393
           A     E+AI +   M+     PD++TY  ++ GLC+ GR  EA D     R     ++ 
Sbjct: 384 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINS 443

[Close]

BLAST of Cmc04g0103401 vs. ExPASy TrEMBL
Match: A0A5D3DR42 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00350 PE=4 SV=1)

HSP 1 Score: 797.7 bits (2059), Expect = 2.1e-227
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0


Query: 1   MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60
           MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN
Sbjct: 1   MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120
           LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH
Sbjct: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120

Query: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180
           NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV
Sbjct: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300
           NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV
Sbjct: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE
Sbjct: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360

Query: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRDSL 396
           AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRDSL
Sbjct: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRDSL 395

[Close]

BLAST of Cmc04g0103401 vs. ExPASy TrEMBL
Match: A0A1S4E2S7 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499230 PE=4 SV=1)

HSP 1 Score: 797.7 bits (2059), Expect = 2.1e-227
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0


Query: 1   MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60
           MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN
Sbjct: 1   MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120
           LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH
Sbjct: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120

Query: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180
           NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV
Sbjct: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300
           NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV
Sbjct: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE
Sbjct: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360

Query: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRDSL 396
           AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRDSL
Sbjct: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRDSL 395

[Close]

BLAST of Cmc04g0103401 vs. ExPASy TrEMBL
Match: A0A0A0L8U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G635360 PE=4 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 6.7e-213
Identity = 373/393 (94.91%), Postives = 379/393 (96.44%), Query Frame = 0


Query: 1   MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60
           ML KFLRPI+SS R PHLFSSPFQSLLNPILPSHLH RFLCSLSPPSSA LPPQ+SDNLN
Sbjct: 1   MLSKFLRPILSSCRRPHLFSSPFQSLLNPILPSHLHHRFLCSLSPPSSALLPPQNSDNLN 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120
           LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDV EALQAQSDPDLALDLFRWTA QRGYKH
Sbjct: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120

Query: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180
           N LTYLTIIKILI  RR HLA+TLVEEVIAGACEMSVPLYNSVIRFCC RK RFNRAFDV
Sbjct: 121 NHLTYLTIIKILIYRRRCHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKPTLETYAMLFNSLLRRFNKL+VSYVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300
           NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVE+GLEFYKEMRV
Sbjct: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE
Sbjct: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360

Query: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRD 394
           AFDLLDELRKRDKLM+EKTFK LLNGLHTVGRD
Sbjct: 361 AFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD 393

[Close]

BLAST of Cmc04g0103401 vs. ExPASy TrEMBL
Match: A0A6J1K5G5 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111490928 PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 2.7e-190
Identity = 333/393 (84.73%), Postives = 358/393 (91.09%), Query Frame = 0


Query: 1   MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60
           M+GKFLRP++S+SR  +  SSPFQSL NPILP +LH R LCS SP  S  LP Q  +N +
Sbjct: 1   MIGKFLRPVLSASRKRNPLSSPFQSLPNPILPYNLHRRSLCSPSPSPSTVLPSQPPENFS 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120
           LPI KVR+QTPLEKQFE+WVQKLKPGFSPSDV EALQAQSDPDLALDLFRWTA QRGYKH
Sbjct: 61  LPIQKVRSQTPLEKQFETWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120

Query: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180
           NDLTYLTIIKILI  RRYHLA+TLVEEV+AGACEMSVPLYNSVIRFCCGR+  FNRAFDV
Sbjct: 121 NDLTYLTIIKILICRRRYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRRFLFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKP LETYAMLFNSLLRRFNKLNV YVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPNLETYAMLFNSLLRRFNKLNVCYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300
           NMIIKA+SKCLEVDEAIRVFREMGLY C+PN+YTYGYIAKGLCEKGRV +GLEFYKEMRV
Sbjct: 241 NMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           +GL PSSSTYMILICSLAME RF+EAIE+CFDML  S APD+LTYRTLLEGLCREGRDS+
Sbjct: 301 KGLSPSSSTYMILICSLAMEGRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSD 360

Query: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRD 394
           AFDLLDEL+KRDKLM+EKTF ILLNGLH VGR+
Sbjct: 361 AFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE 393

[Close]

BLAST of Cmc04g0103401 vs. ExPASy TrEMBL
Match: A0A6J1ETB4 (pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111437373 PE=4 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 1.5e-188
Identity = 331/393 (84.22%), Postives = 358/393 (91.09%), Query Frame = 0


Query: 1   MLGKFLRPIVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLN 60
           M+GKFLRP++S+SR  +  SS FQSL NPILP +LH R LCS SP  S  LPPQ  +N +
Sbjct: 1   MIGKFLRPVLSASRKRNPLSSLFQSLPNPILPYNLHRRSLCSPSP--STVLPPQTPENFD 60

Query: 61  LPIPKVRTQTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKH 120
           LPI KVR+QTPLEKQFE+W+QKLKPGFSPSDV EALQAQSDPDLALDLFRWTA QRGYKH
Sbjct: 61  LPIQKVRSQTPLEKQFETWIQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKH 120

Query: 121 NDLTYLTIIKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDV 180
           NDLTYLTIIKILI  R+YHLA+TLVEEV+AGACEMSVPLYNSVIRFCCGRK  FNRAFDV
Sbjct: 121 NDLTYLTIIKILICRRKYHLAETLVEEVLAGACEMSVPLYNSVIRFCCGRKFLFNRAFDV 180

Query: 181 YKKMWKSDDCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVL 240
           YKKMWKSDDCKP LETYAMLFN+LLRRFNKLNV YVYLHSVRSLTKQMKSSGVIPDTFVL
Sbjct: 181 YKKMWKSDDCKPNLETYAMLFNTLLRRFNKLNVCYVYLHSVRSLTKQMKSSGVIPDTFVL 240

Query: 241 NMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRV 300
           NMIIKA+SKCLEVDEAIRVFREMGLY C+PN+YTYGYIAKGLCEKGRV +GLEFYKEMRV
Sbjct: 241 NMIIKAFSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIAKGLCEKGRVGQGLEFYKEMRV 300

Query: 301 RGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSE 360
           +GL PSSSTYMILICSLAME RF+EAIE+CFDML  S APD+LTYRTLLEGLCREGRDS+
Sbjct: 301 KGLFPSSSTYMILICSLAMECRFDEAIEVCFDMLSTSRAPDMLTYRTLLEGLCREGRDSD 360

Query: 361 AFDLLDELRKRDKLMSEKTFKILLNGLHTVGRD 394
           AFDLLDEL+KRDKLM+EKTF ILLNGLH VGR+
Sbjct: 361 AFDLLDELKKRDKLMNEKTFNILLNGLHIVGRE 391

[Close]

BLAST of Cmc04g0103401 vs. TAIR 10
Match: AT3G25210.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 471.1 bits (1211), Expect = 8.8e-133
Identity = 233/384 (60.68%), Postives = 297/384 (77.34%), Query Frame = 0


Query: 9   IVSSSRSPHLFSSPFQSLLNPILPSHLHPRFLCSLSPPSSAFLPPQDSDNLNLPIPKVRT 68
           + S++RS +L S PF S       +HL   F    S P S   P            ++RT
Sbjct: 11  LTSTNRSRNL-SPPFLS----TAVNHLSLSFSSVSSSPESHTSP-----------SRIRT 70

Query: 69  QTPLEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKHNDLTYLTI 128
           +TPLE QFE+W+Q LKPGF+ SDV+ AL+AQSDPDLALD+FRWTA QRGYKHN   Y T+
Sbjct: 71  RTPLETQFETWIQNLKPGFTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTM 130

Query: 129 IKILISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDVYKKMWKSD 188
           IK  I+ +R +  +TL+EEVIAGACEMSVPLYN +IRFCCGRK  FNRAFDVY KM +SD
Sbjct: 131 IKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSD 190

Query: 189 DCKPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYS 248
           D KP LETY +L +SLL+RFNKLNV YVYLH+VRSLTKQMKS+GVIPDTFVLNMIIKAY+
Sbjct: 191 DSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYA 250

Query: 249 KCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRVRGLIPSSS 308
           KCLEVDEAIRVF+EM LY  +PN+YTY Y+ KG+CEKGRV +GL FYKEM+V+G++P+ S
Sbjct: 251 KCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGS 310

Query: 309 TYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDEL 368
            YM+LICSL+MERR +EA+E+ +DML NS++PD+LTY T+L  LCR GR SEA ++++E 
Sbjct: 311 CYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEW 370

Query: 369 RKRDKLMSEKTFKILLNGLHTVGR 393
           +KRD +M E+ ++ L++ ++ + +
Sbjct: 371 KKRDPVMGERNYRTLMDEVYFLNK 378

[Close]

BLAST of Cmc04g0103401 vs. TAIR 10
Match: AT2G27800.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 209.9 bits (533), Expect = 3.7e-54
Identity = 108/317 (34.07%), Postives = 189/317 (59.62%), Query Frame = 0


Query: 75  QFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKHNDLTYLTIIKILIS 134
           +F   + KL P F+P ++ +A+  + DP L   LF W + Q  + H + +Y   I+ L +
Sbjct: 125 KFHETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGA 184

Query: 135 CRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDVYKKM--WKSDDCKP 194
            + Y     +V +V++     +  LYNS+I F   +  +  RA ++++ M   K+ +C+P
Sbjct: 185 AKMYQEMDDIVNQVLSVRHIGNENLYNSII-FYFTKAGKLIRAVNIFRHMVTSKNLECRP 244

Query: 195 TLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSKCLE 254
           T+ TY +LF +LL R N   +++VY+ +VRSL +QM  SG+ PD F LN ++K Y   L 
Sbjct: 245 TIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLH 304

Query: 255 VDEAIRVFREMG-LYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRVRGLIPSSSTYM 314
           V++A+R+F +M  +Y C+PNS+TY Y+  GLC +GR     E   EM+ +G +P+  +Y 
Sbjct: 305 VNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYN 364

Query: 315 ILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRKR 374
            L+ + A+    ++A++  ++M+ N    D ++YRTL++  CR+G+  EA  LL+ LR++
Sbjct: 365 SLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 424

Query: 375 DKLMSEKTFKILLNGLH 389
            +L+   ++  L+N LH
Sbjct: 425 -QLVDRDSYDKLVNVLH 439

[Close]

BLAST of Cmc04g0103401 vs. TAIR 10
Match: AT5G46100.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 139.0 bits (349), Expect = 8.0e-33
Identity = 89/312 (28.53%), Postives = 160/312 (51.28%), Query Frame = 0


Query: 82  KLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQ--RGYKHNDLTYLTIIKILISCRRYH 141
           K     +PS VI+ ++A+ D + ++ +F     +   GY H+  ++  ++  L+S  ++ 
Sbjct: 9   KWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFK 68

Query: 142 LAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFD---VYKKMWKSDDCKPTLET 201
            A+ L+  +    C +S  +  S+    C    R +R FD   V+ KM K  DC P+ + 
Sbjct: 69  AAEDLIVRMKIENCVVSEDILLSI----CRGYGRVHRPFDSLRVFHKM-KDFDCDPSQKA 128

Query: 202 YAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSK-CLEVDE 261
           Y  +  ++L   N+LN+++ +        K M+  G+ P    LN++IKA  +    VD 
Sbjct: 129 YVTVL-AILVEENQLNLAFKFY-------KNMREIGLPPTVASLNVLIKALCRNDGTVDA 188

Query: 262 AIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRVRGLIPSSSTYMILIC 321
            +++F EM    C P+SYTYG +  GLC  GR++E  + + EM  +   P+  TY  LI 
Sbjct: 189 GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLIN 248

Query: 322 SLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRKRDKLM 381
            L   +  +EA+    +M    + P++ TY +L++GLC++GR  +A +L + +  R    
Sbjct: 249 GLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP 307

Query: 382 SEKTFKILLNGL 388
           +  T+  L+ GL
Sbjct: 309 NMVTYTTLITGL 307

[Close]

BLAST of Cmc04g0103401 vs. TAIR 10
Match: AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 132.1 bits (331), Expect = 9.7e-31
Identity = 94/364 (25.82%), Postives = 168/364 (46.15%), Query Frame = 0


Query: 72  LEKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKHNDLTYLTIIKI 131
           LEK F+     L P + P  ++E    + DP LA   F+W+  + G+KH+  +Y  +  I
Sbjct: 98  LEKLFD---LTLAPIWVPRVLVE---LKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHI 157

Query: 132 LISCRRYHLAQTLVEEVI-----------------------------------AGACEMS 191
           L   R Y+ A ++++E++                                    G  E +
Sbjct: 158 LFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEA 217

Query: 192 VPLYNSVIRFCCGRKTR-FNRAFDVYKKMWKSDDCK------------PTLETYAMLFNS 251
           +  ++ + RF    KTR  N     + K+ K+DD K            PT+ TY ++ + 
Sbjct: 218 IQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDC 277

Query: 252 LLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSKCLEVDEAIRVFREM 311
           + +  +        + + R L ++MK  G++PDT   N +I  + K   +D+ +  F EM
Sbjct: 278 MCKEGD--------VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 337

Query: 312 GLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRVRGLIPSSSTYMILICSLAMERRF 371
               C+P+  TY  +    C+ G++  GLEFY+EM+  GL P+  +Y  L+ +   E   
Sbjct: 338 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 397

Query: 372 EEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRKRDKLMSEKTFKIL 388
           ++AI+   DM    + P+  TY +L++  C+ G  S+AF L +E+ +     +  T+  L
Sbjct: 398 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 447

[Close]

BLAST of Cmc04g0103401 vs. TAIR 10
Match: AT5G27300.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 122.5 bits (306), Expect = 7.7e-28
Identity = 76/301 (25.25%), Postives = 137/301 (45.51%), Query Frame = 0


Query: 73  EKQFESWVQKLKPGFSPSDVIEALQAQSDPDLALDLFRWTALQRGYKHNDLTYLTIIKIL 132
           E +F+  + KL P F+P ++ +A+  + DP L   LF W + Q  + H + +        
Sbjct: 116 ESKFQETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCS-------- 175

Query: 133 ISCRRYHLAQTLVEEVIAGACEMSVPLYNSVIRFCCGRKTRFNRAFDVYKKMWKSD--DC 192
                YH+A                     + +    +  +  RA ++++ M  S   +C
Sbjct: 176 -----YHIA---------------------IRKLGAAKSGKLIRAVNIFRHMVNSRNLEC 235

Query: 193 KPTLETYAMLFNSLLRRFNKLNVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSKC 252
           +PT+ TY +LF +LL R N   ++++Y+ +VRSL +QM  SG+ PD F LN ++      
Sbjct: 236 RPTMRTYHILFKALLGRGNNSFINHLYMETVRSLFRQMVDSGIEPDVFALNCLV------ 295

Query: 253 LEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEEGLEFYKEMRVRGLIPSSSTY 312
                                             KGR     E   EM+ +G +P+  +Y
Sbjct: 296 ----------------------------------KGRTINTRELLSEMKGKGFVPNGKSY 342

Query: 313 MILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRK 372
             L+ + A+    ++A++  ++M+ N    D ++YRTL++  CR+G+  EA  LL+ LR+
Sbjct: 356 NSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLRE 342

The following BLAST results are available for this feature:

BLAST of Cmc04g0103401 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902527.1	4.4e-227	100.00	PREDICTED: pentatricopeptide repeat-containing protein At3g25210, mitochondrial ...	[more]
XP_004144398.1	1.4e-212	94.91	pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucumis sa...	[more]
XP_038888802.1	5.8e-203	90.59	pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Benincasa ...	[more]
KAG7036236.1	3.3e-190	84.48	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022995354.1	5.7e-190	84.73	pentatricopeptide repeat-containing protein At3g25210, mitochondrial [Cucurbita ...	[more]

BLAST of Cmc04g0103401 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSF5	1.2e-131	60.68	Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidop...	[more]
Q9ZUY1	5.2e-53	34.07	Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidop...	[more]
Q9FNL2	1.1e-31	28.53	Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX...	[more]
P0C894	1.4e-29	25.82	Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th...	[more]
Q9LR67	8.3e-27	25.07	Pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Arabidop...	[more]

BLAST of Cmc04g0103401 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DR42	2.1e-227	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4E2S7	2.1e-227	100.00	pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucumis ...	[more]
A0A0A0L8U7	6.7e-213	94.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G635360 PE=4 SV=1	[more]
A0A6J1K5G5	2.7e-190	84.73	pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucurbit...	[more]
A0A6J1ETB4	1.5e-188	84.22	pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Cucurbit...	[more]

BLAST of Cmc04g0103401 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25210.1	8.8e-133	60.68	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G27800.1	3.7e-54	34.07	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G46100.1	8.0e-33	28.53	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G02150.1	9.7e-31	25.82	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G27300.1	7.7e-28	25.25	pentatricopeptide (PPR) repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 308..335 e-value: 0.024 score: 14.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 235..283 e-value: 3.1E-12 score: 46.5 coord: 344..387 e-value: 9.0E-9 score: 35.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 160..193 e-value: 6.1E-4 score: 17.8 coord: 309..341 e-value: 2.2E-5 score: 22.3 coord: 239..271 e-value: 1.3E-4 score: 19.9 coord: 344..372 e-value: 2.3E-5 score: 22.2 coord: 273..306 e-value: 2.2E-7 score: 28.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 306..340 score: 8.79102
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 156..192 score: 8.560833
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 236..270 score: 10.468099
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 341..375 score: 10.402331
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 271..305 score: 12.342482
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 54..211 e-value: 1.9E-23 score: 85.0 coord: 212..301 e-value: 1.4E-20 score: 75.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 308..392 e-value: 3.7E-15 score: 57.7
None	No IPR available	PANTHER	PTHR47938:SF2	OS06G0184866 PROTEIN	coord: 44..393
None	No IPR available	PANTHER	PTHR47938	RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED	coord: 44..393

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0103401.1	Cmc04g0103401.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding