Cmc04g0102831 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0102831
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCACTA en-spm transposon protein
LocationCMiso1.1chr04: 19765815 .. 19766681 (-)
RNA-Seq ExpressionCmc04g0102831
SyntenyCmc04g0102831
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACCATCGACCCCGACAAGTTCGGAACTCTTGACTTGCACAATCATCTCCTCGTCGAGCATCAAACCAAGTCTTTCAACGGTGTAGAATGAAAACATCCTACCAACTTGGCCTGAGGGTTATCGATTGGAATGAACGAAGGAGGAAACGCATTGCGCTCTAGACCCATGGGGAATTATTCATATTCATTCGAGATAGTTCACGAGGAAGAGAACGAAAAAGAGAGGTTACGATGCCCACTACGCGGTTTGAATAGCTCGACCTACTGGAATTTAAGAAGACTGCTGATGTTCGTAAGTGTGTTCTTTGGATGTTCTTTCCCTTTCCTCACTTATCTTTCTGCAACGAAAAGATGAACTCCAAAGAGAATAGGACACATAACAATCTTTTTTCCCTTTTATTTTCTTCCTAAGTCAATCCCCTTCGCTACTCCCATAATCAATCTCTTTCTTCCAATTCTTCGTGTTAAGGAGAGATTTCTTGTTTATCATGTCTAAGTATGACATATGTTTTATTCTATTTTATGTTTTATGTTTGTTCTGGAGTTGTTCTTTTGTTTGGTTTGGTTTGTGTAATTTGTGACAAATTTGAGATTTGCATTACTTGTGTGATTTTGTTGTCCTTATTCTTGCTACCAATAATTCCCTTCACAAGAGCTTTTAAATCGTTTCTGTATTGGTATAATGACTATGCACCATTATTTCATGTCTCTCAATTCATTGTGGCATATAGTTGTTTTTCATTTATAGAAGATAATTTACCGATAACATTTTATGCTGAATTTCAGCTATGATTACTCGGGATATGGAGCTTCTTTTGATAAGGTAAGCAAGCAATTCTATTTCTTTTCACCTACTTTAGAACTTTT

mRNA sequence

CACCATCGACCCCGACAAGTTCGGAACTCTTGACTTGCACAATCATCTCCTCGTCGAGCATCAAACCAAGTCTTTCAACGGTGTAGAATGAAAACATCCTACCAACTTGGCCTGAGGGTTATCGATTGGAATGAACGAAGGAGGAAACGCATTGCGCTCTAGACCCATGGGGAATTATTCATATTCATTCGAGATAGTTCACGAGGAAGAGAACGAAAAAGAGAGGTTACGATGCCCACTACGCGGTTTGAATAGCTCGACCTACTGGAATTTAAGAAGACTGCTGATGTTCCTATGATTACTCGGGATATGGAGCTTCTTTTGATAAGGTAAGCAAGCAATTCTATTTCTTTTCACCTACTTTAGAACTTTT

Coding sequence (CDS)

ATGAACGAAGGAGGAAACGCATTGCGCTCTAGACCCATGGGGAATTATTCATATTCATTCGAGATAGTTCACGAGGAAGAGAACGAAAAAGAGAGGTTACGATGCCCACTACGCGGTTTGAATAGCTCGACCTACTGGAATTTAAGAAGACTGCTGATGTTCCTATGA

Protein sequence

MNEGGNALRSRPMGNYSYSFEIVHEEENEKERLRCPLRGLNSSTYWNLRRLLMFL
Homology
BLAST of Cmc04g0102831 vs. NCBI nr
Match: KAA0053564.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 66.2 bits (160), Expect = 9.8e-08
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0

Query: 1  MNEGGNALRSRPMGNYSYSFEIVHEEENEKE 32
          MNEGGNALRSRPMGNYSYSFEIVH EENEKE
Sbjct: 1  MNEGGNALRSRPMGNYSYSFEIVHNEENEKE 31

BLAST of Cmc04g0102831 vs. ExPASy TrEMBL
Match: A0A5A7UEC5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G001300 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.8e-08
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0

Query: 1  MNEGGNALRSRPMGNYSYSFEIVHEEENEKE 32
          MNEGGNALRSRPMGNYSYSFEIVH EENEKE
Sbjct: 1  MNEGGNALRSRPMGNYSYSFEIVHNEENEKE 31

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0053564.19.8e-0896.77CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UEC54.8e-0896.77CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0102831.1Cmc04g0102831.1mRNA