Cmc04g0102151 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0102151
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr04: 18865944 .. 18866384 (-)
RNA-Seq Expression	Cmc04g0102151
Synteny	Cmc04g0102151

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGATGAGATTGAAATTAAAGACTTGGGGAATCCAAAGTATTTTCTTAGGATTGAGATTGCTAGGTTCAGAGAGGGCATCTCCGTGTCTCAGAGAAAGTACATTCTTGATTTATTAGCTGAAATAGGTATGATGGGATATCGTCTTGCTGATACGCCCACTGAGCTCAATGCCAAACTTGGAAATTCTAGTGACAGGATTTGTGTTGATAAAGAGAAATATCAGGGCCTTGTGAGAAAGTTGATTTACTTGTCTCACACTAAGCCAGACATCTCCTATGTTGTGCGTATTGTCAATCAAATCATGCAGGCTCCTTATGAAGACCACATGAAGGCAGTTAATAGAATTCTGAGGTATTTAAAAGCAACTACCAGTAAAGGGTTGAGGTTCAGGAAAACTGACAGAAGGTGTATTGAGGCCTATATTGACCTTGATTGA

mRNA sequence

ATGGGAGATGAGATTGAAATTAAAGACTTGGGGAATCCAAAGTATTTTCTTAGGATTGAGATTGCTAGGTTCAGAGAGGGCATCTCCGTGTCTCAGAGAAAGTACATTCTTGATTTATTAGCTGAAATAGGTATGATGGGATATCGTCTTGCTGATACGCCCACTGAGCTCAATGCCAAACTTGGAAATTCTAGTGACAGGATTTGTGTTGATAAAGAGAAATATCAGGGCCTTGTGAGAAAGTTGATTTACTTGTCTCACACTAAGCCAGACATCTCCTATGTTGTGCGTATTGTCAATCAAATCATGCAGGCTCCTTATGAAGACCACATGAAGGCAGTTAATAGAATTCTGAGGTATTTAAAAGCAACTACCAGTAAAGGGTTGAGGTTCAGGAAAACTGACAGAAGGTGTATTGAGGCCTATATTGACCTTGATTGA

Coding sequence (CDS)

ATGGGAGATGAGATTGAAATTAAAGACTTGGGGAATCCAAAGTATTTTCTTAGGATTGAGATTGCTAGGTTCAGAGAGGGCATCTCCGTGTCTCAGAGAAAGTACATTCTTGATTTATTAGCTGAAATAGGTATGATGGGATATCGTCTTGCTGATACGCCCACTGAGCTCAATGCCAAACTTGGAAATTCTAGTGACAGGATTTGTGTTGATAAAGAGAAATATCAGGGCCTTGTGAGAAAGTTGATTTACTTGTCTCACACTAAGCCAGACATCTCCTATGTTGTGCGTATTGTCAATCAAATCATGCAGGCTCCTTATGAAGACCACATGAAGGCAGTTAATAGAATTCTGAGGTATTTAAAAGCAACTACCAGTAAAGGGTTGAGGTTCAGGAAAACTGACAGAAGGTGTATTGAGGCCTATATTGACCTTGATTGA

Protein sequence

MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAKLGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILRYLKATTSKGLRFRKTDRRCIEAYIDLD

Homology

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BLAST of Cmc04g0102151 vs. NCBI nr
Match: KAA0065570.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK07136.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 238.8 bits (608), Expect = 2.9e-59
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK 60
           MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK
Sbjct: 1   MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK 60

Query: 61  LGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILR 120
           LGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILR
Sbjct: 61  LGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILR 119

[Close]

BLAST of Cmc04g0102151 vs. NCBI nr
Match: XP_031740860.1 (uncharacterized protein LOC116403658 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 1.7e-51
Identity = 105/146 (71.92%), Postives = 119/146 (81.51%), Query Frame = 0


Query: 1   MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK 60
           MGDE EIKDLGN KYFL +E+AR +EGISVSQRKYILDLL E GM+G R  DTP E N K
Sbjct: 21  MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYILDLLTETGMLGCRPTDTPIEFNCK 80

Query: 61  LGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILRY 120
           LGNS D++ VDKE+YQ LV KLIYLSHT+PDIS+ V +V+Q MQ P E+HMKAVNRILRY
Sbjct: 81  LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQTPNEEHMKAVNRILRY 140

Query: 121 LKATTSKGLRFRKTDRRCIEAYIDLD 147
           LK+T  KGL FRKTDR+ IEAY D D
Sbjct: 141 LKSTPGKGLMFRKTDRKTIEAYTDSD 166

[Close]

BLAST of Cmc04g0102151 vs. NCBI nr
Match: XP_031741968.1 (uncharacterized protein LOC116403980 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 1.7e-51
Identity = 105/146 (71.92%), Postives = 119/146 (81.51%), Query Frame = 0


Query: 1   MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK 60
           MGDE EIKDLGN KYFL +E+AR +EGISVSQRKYILDLL E GM+G R  DTP E N K
Sbjct: 91  MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYILDLLTETGMLGCRPTDTPIEFNCK 150

Query: 61  LGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILRY 120
           LGNS D++ VDKE+YQ LV KLIYLSHT+PDIS+ V +V+Q MQ P E+HMKAVNRILRY
Sbjct: 151 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQTPNEEHMKAVNRILRY 210

Query: 121 LKATTSKGLRFRKTDRRCIEAYIDLD 147
           LK+T  KGL FRKTDR+ IEAY D D
Sbjct: 211 LKSTPGKGLMFRKTDRKTIEAYTDSD 236

[Close]

BLAST of Cmc04g0102151 vs. NCBI nr
Match: TYK25960.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 212.6 bits (540), Expect = 2.3e-51
Identity = 106/146 (72.60%), Postives = 120/146 (82.19%), Query Frame = 0


Query: 1   MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK 60
           MGDE EIKDLGN KYFL IE+ RF+EGISVSQRKY LDLL EIGM+G R ADTPTE N K
Sbjct: 1   MGDECEIKDLGNLKYFLGIEVTRFKEGISVSQRKYTLDLLTEIGMLGCRPADTPTEFNYK 60

Query: 61  LGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILRY 120
           LGNS D++ VD+E+YQ LV KLIYLSHT PDIS+ V +V+Q MQAPYE HM+AVNRILRY
Sbjct: 61  LGNSDDQVSVDEEQYQRLVGKLIYLSHTCPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 120

Query: 121 LKATTSKGLRFRKTDRRCIEAYIDLD 147
           LK T+ KGL  RKT+R+ IEAY D D
Sbjct: 121 LKNTSGKGLMSRKTNRKTIEAYTDSD 146

[Close]

BLAST of Cmc04g0102151 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 211.8 bits (538), Expect = 3.8e-51
Identity = 105/146 (71.92%), Postives = 119/146 (81.51%), Query Frame = 0


Query: 1    MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK 60
            MGDE EIKDLGN KYFL +E+AR +EGISVSQRKY LDLL E GM+G R ADTP E N K
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILRY 120
            LGNS D++ VDKE+YQ LV KLIYLSHT+PDIS+ V +V+Q MQAPYE HM+AVNRILRY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKATTSKGLRFRKTDRRCIEAYIDLD 147
            LK T  KGL FRKT+R+ IEAY D D
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSD 1454

[Close]

BLAST of Cmc04g0102151 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.6e-23
Identity = 58/146 (39.73%), Postives = 82/146 (56.16%), Query Frame = 0


Query: 1    MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK 60
            +     +KD     YFL IE  R   G+ +SQR+YILDLLA   M+  +   TP   + K
Sbjct: 1171 LSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPK 1230

Query: 61   LGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILRY 120
            L   S     D  +Y+G+V  L YL+ T+PDISY V  ++Q M  P E+H++A+ RILRY
Sbjct: 1231 LSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRY 1290

Query: 121  LKATTSKGLRFRKTDRRCIEAYIDLD 147
            L  T + G+  +K +   + AY D D
Sbjct: 1291 LAGTPNHGIFLKKGNTLSLHAYSDAD 1316

[Close]

BLAST of Cmc04g0102151 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-21
Identity = 54/146 (36.99%), Postives = 80/146 (54.79%), Query Frame = 0


Query: 1    MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK 60
            +     +K+  +  YFL IE  R  +G+ +SQR+Y LDLLA   M+  +   TP   + K
Sbjct: 1154 LSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPK 1213

Query: 61   LGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILRY 120
            L   S     D  +Y+G+V  L YL+ T+PD+SY V  ++Q M  P +DH  A+ R+LRY
Sbjct: 1214 LTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRY 1273

Query: 121  LKATTSKGLRFRKTDRRCIEAYIDLD 147
            L  T   G+  +K +   + AY D D
Sbjct: 1274 LAGTPDHGIFLKKGNTLSLHAYSDAD 1299

[Close]

BLAST of Cmc04g0102151 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-15
Identity = 53/147 (36.05%), Postives = 74/147 (50.34%), Query Frame = 0


Query: 1   MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK 60
           +     +KDLG   YFL I+I     G+ +SQ KY   +L   GM+  +   TP  L  K
Sbjct: 27  LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPL--K 86

Query: 61  LGNS-SDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILR 120
           L +S S     D   ++ +V  L YL+ T+PDISY V IV Q M  P       + R+LR
Sbjct: 87  LNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLR 146

Query: 121 YLKATTSKGLRFRKTDRRCIEAYIDLD 147
           Y+K T   GL   K  +  ++A+ D D
Sbjct: 147 YVKGTIFHGLYIHKNSKLNVQAFCDSD 171

[Close]

BLAST of Cmc04g0102151 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 42/140 (30.00%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 7   IKDLGNPKYFLRIEIARFREG-ISVSQRKYILDLLAEIGMMGYRLADTPTELNAKLGNSS 66
           +KDLG    FL + I +   G I++S + YI    +E  +  ++L  TP   +  L  ++
Sbjct: 114 MKDLGKVDKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETT 173

Query: 67  DRICVDKEKYQGLVRKLIYLSHT-KPDISYVVRIVNQIMQAPYEDHMKAVNRILRYLKAT 126
                D   YQ +V +L++ ++T +PDISY V ++++ ++ P   H+++  R+LRYL  T
Sbjct: 174 SPHLKDITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 233

Query: 127 TSKGLRFRKTDRRCIEAYID 145
            S  L++R   +  +  Y D
Sbjct: 234 RSMCLKYRSGSQLALTVYCD 253

[Close]

BLAST of Cmc04g0102151 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.5e-10
Identity = 48/155 (30.97%), Postives = 77/155 (49.68%), Query Frame = 0


Query: 1    MGDEIEIKDLGNPKYFLRIEIARFREG--ISVSQRKYILDLLAEIGMMGYRLADTPTELN 60
            +    ++KDLG  +  L ++I R R    + +SQ KYI  +L    M   +   TP   +
Sbjct: 1029 LSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGH 1088

Query: 61   AKLGNSSDRICVD------KEKYQGLVRKLIY-LSHTKPDISYVVRIVNQIMQAPYEDHM 120
             KL        V+      K  Y   V  L+Y +  T+PDI++ V +V++ ++ P ++H 
Sbjct: 1089 LKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHW 1148

Query: 121  KAVNRILRYLKATTSKGLRFRKTDRRCIEAYIDLD 147
            +AV  ILRYL+ TT   L F  +D   ++ Y D D
Sbjct: 1149 EAVKWILRYLRGTTGDCLCFGGSD-PILKGYTDAD 1182

[Close]

BLAST of Cmc04g0102151 vs. ExPASy TrEMBL
Match: A0A5D3CA07 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00070 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.4e-59
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK 60
           MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK
Sbjct: 1   MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK 60

Query: 61  LGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILR 120
           LGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILR
Sbjct: 61  LGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILR 119

[Close]

BLAST of Cmc04g0102151 vs. ExPASy TrEMBL
Match: A0A5D3DRQ5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1441G00210 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.1e-51
Identity = 106/146 (72.60%), Postives = 120/146 (82.19%), Query Frame = 0


Query: 1   MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK 60
           MGDE EIKDLGN KYFL IE+ RF+EGISVSQRKY LDLL EIGM+G R ADTPTE N K
Sbjct: 1   MGDECEIKDLGNLKYFLGIEVTRFKEGISVSQRKYTLDLLTEIGMLGCRPADTPTEFNYK 60

Query: 61  LGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILRY 120
           LGNS D++ VD+E+YQ LV KLIYLSHT PDIS+ V +V+Q MQAPYE HM+AVNRILRY
Sbjct: 61  LGNSDDQVSVDEEQYQRLVGKLIYLSHTCPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 120

Query: 121 LKATTSKGLRFRKTDRRCIEAYIDLD 147
           LK T+ KGL  RKT+R+ IEAY D D
Sbjct: 121 LKNTSGKGLMSRKTNRKTIEAYTDSD 146

[Close]

BLAST of Cmc04g0102151 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.9e-51
Identity = 105/146 (71.92%), Postives = 119/146 (81.51%), Query Frame = 0


Query: 1    MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK 60
            MGDE EIKDLGN KYFL +E+AR +EGISVSQRKY LDLL E GM+G R ADTP E N K
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILRY 120
            LGNS D++ VDKE+YQ LV KLIYLSHT+PDIS+ V +V+Q MQAPYE HM+AVNRILRY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKATTSKGLRFRKTDRRCIEAYIDLD 147
            LK T  KGL FRKT+R+ IEAY D D
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSD 1454

[Close]

BLAST of Cmc04g0102151 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.9e-51
Identity = 105/146 (71.92%), Postives = 119/146 (81.51%), Query Frame = 0


Query: 1    MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK 60
            MGDE EIKDLGN KYFL +E+AR +EGISVSQRKY LDLL E GM+G R ADTP E N K
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILRY 120
            LGNS D++ VDKE+YQ LV KLIYLSHT+PDIS+ V +V+Q MQAPYE HM+AVNRILRY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKATTSKGLRFRKTDRRCIEAYIDLD 147
            LK T  KGL FRKT+R+ IEAY D D
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSD 1454

[Close]

BLAST of Cmc04g0102151 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.9e-51
Identity = 105/146 (71.92%), Postives = 119/146 (81.51%), Query Frame = 0


Query: 1    MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK 60
            MGDE EIKDLGN KYFL +E+AR +EGISVSQRKY LDLL E GM+G R ADTP E N K
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSSDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILRY 120
            LGNS D++ VDKE+YQ LV KLIYLSHT+PDIS+ V +V+Q MQAPYE HM+AVNRILRY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKATTSKGLRFRKTDRRCIEAYIDLD 147
            LK T  KGL FRKT+R+ IEAY D D
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSD 1454

[Close]

BLAST of Cmc04g0102151 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-21
Identity = 52/139 (37.41%), Postives = 82/139 (58.99%), Query Frame = 0


Query: 6   EIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAKLGNSS 65
           +++DLG  KYFL +EIAR   GI++ QRKY LDLL E G++G + +  P + +      S
Sbjct: 309 KLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHS 368

Query: 66  DRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILRYLKATT 125
               VD + Y+ L+ +L+YL  T+ DIS+ V  ++Q  +AP   H +AV +IL Y+K T 
Sbjct: 369 GGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTV 428

Query: 126 SKGLRFRKTDRRCIEAYID 145
            +GL +       ++ + D
Sbjct: 429 GQGLFYSSQAEMQLQVFSD 447

[Close]

BLAST of Cmc04g0102151 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-16
Identity = 53/147 (36.05%), Postives = 74/147 (50.34%), Query Frame = 0


Query: 1   MGDEIEIKDLGNPKYFLRIEIARFREGISVSQRKYILDLLAEIGMMGYRLADTPTELNAK 60
           +     +KDLG   YFL I+I     G+ +SQ KY   +L   GM+  +   TP  L  K
Sbjct: 27  LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPL--K 86

Query: 61  LGNS-SDRICVDKEKYQGLVRKLIYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILR 120
           L +S S     D   ++ +V  L YL+ T+PDISY V IV Q M  P       + R+LR
Sbjct: 87  LNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLR 146

Query: 121 YLKATTSKGLRFRKTDRRCIEAYIDLD 147
           Y+K T   GL   K  +  ++A+ D D
Sbjct: 147 YVKGTIFHGLYIHKNSKLNVQAFCDSD 171

[Close]

BLAST of Cmc04g0102151 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 45.4 bits (106), Expect = 4.4e-05
Identity = 21/64 (32.81%), Postives = 38/64 (59.38%), Query Frame = 0


Query: 83  IYLSHTKPDISYVVRIVNQIMQAPYEDHMKAVNRILRYLKATTSKGLRFRKTDRRCIEAY 142
           +YL+ T+PD+++ V  ++Q   A     M+AV ++L Y+K T  +GL +  T    ++A+
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 143 IDLD 147
            D D
Sbjct: 61  ADSD 64

The following BLAST results are available for this feature:

BLAST of Cmc04g0102151 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065570.1	2.9e-59	100.00	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK07136.1 putative m...	[more]
XP_031740860.1	1.7e-51	71.92	uncharacterized protein LOC116403658 [Cucumis sativus]	[more]
XP_031741968.1	1.7e-51	71.92	uncharacterized protein LOC116403980 [Cucumis sativus]	[more]
TYK25960.1	2.3e-51	72.60	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYJ99952.1	3.8e-51	71.92	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]

BLAST of Cmc04g0102151 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	4.6e-23	39.73	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.9e-21	36.99	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P92519	1.6e-15	36.05	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
P25600	1.4e-11	30.00	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]
P10978	1.5e-10	30.97	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Cmc04g0102151 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CA07	1.4e-59	100.00	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3DRQ5	1.1e-51	72.60	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3BJK7	1.9e-51	71.92	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	1.9e-51	71.92	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	1.9e-51	71.92	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]

BLAST of Cmc04g0102151 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.5e-21	37.41	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.1e-16	36.05	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	4.4e-05	32.81	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 6..114
None	No IPR available	PANTHER	PTHR11439:SF344	SUBFAMILY NOT NAMED	coord: 6..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0102151.1	Cmc04g0102151.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003676	nucleic acid binding