Cmc04g0101961 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0101961
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr04: 18541809 .. 18543873 (-)
RNA-Seq Expression	Cmc04g0101961
Synteny	Cmc04g0101961

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAATAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCTATAGTGTTTTCTAAGATTGACCTTCGGTCAGGATATCATCAGCTGAGGATTAAGGATAGGGATGTACCAAAGACAACCTTTCGTTCCAGATATGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGATGAATGCTCCGACAGTGTTTATGGATTTGATGAACAAAGTGTTTAGGGAGTTCCTAGACACTTTTCTGATCGTGTTTATCGATGATATTTTGATATATTCCAAGACAGAGGCCGAGCATGAGGAGCATTTACGCATGGTTCTAGAAACCCTTCGAGCTAATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAGGTATCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAACTAAGATAGAGGCAGTCACCAGTTGGCCCCAACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGTTTTGTGGAGAACTTTTCCCTTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGCTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAAACAGAAGCTAGTTACTGTACCGATTCTTACGGTACCTGATGGTTCAGGGAGTTTTGTGATTTACAGTGATCCTTCTAAGAAAGGTTTGGGTTGTGTATTGATGTAGCAAGGTAAGGTAGTCACTTATACTTTTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAAATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATATTATATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATTTTGAGAGGGCTGAGATTGTAGTGTCAGTAGGGGCAGTCACCATGCATTTAGCCCAGTTGACGGTACAGCCGACCTTGAGGCAGAAGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAGCGTGGCCTAGCAGAAGTAGGCAAGCTGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCAACAGTTCCCCATTTTTTATGCACTCGGATAGTACGAAGATGTATCAGGACCTGAAACGGGTTTATTGGTGGCGTAATATGAAGAGAGAGGTGGAAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCACCAACGCAGAAACCAACGGGTTTATTACAACCCTTGAGCGTACCGAAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACGGGACTACCTAGAACTTTGAGGAGTTTTACAGTGATTTGGGTTGTGGTTGACAGGCTTACCAAATCAGCACGCTTCATTTCGGGTAAATCCACCTATATAGCTAGTAAGTGGGCACAGTTGTACATGTCTGAAATAGTGAGACTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCATGCTGCTTTTCAGTTCAACGCTAGTCTGCAGCCGCCGCACGTTGCCTCGTTCGTCTGCGGTAGTGGAAGCCCGACCGTCGTTCAAACTCCGTCAATCCTTTTGCCTTGCTGTTTGACGCCTCACCTTCACCTTCGCTTTCGTTTGGTTTCGCCGTCGGCCCTCCCAATCTCCACTTCGTATCCAGCCAATGCCACCGTCGTCACTGTCCGTTCGTTTTGA

mRNA sequence

ATGCGCCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAATAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCTATAGTGTTTTCTAAGATTGACCTTCGGTCAGGATATCATCAGCTGAGGATTAAGGATAGGGATGTACCAAAGACAACCTTTCGTTCCAGATATGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGATGAATGCTCCGACAGTGTTTATGGATTTGATGAACAAAGTGTTTAGGGAGTTCCTAGACACTTTTCTGATCGTGTTTATCGATGATATTTTGATATATTCCAAGACAGAGGCCGAGCATGAGGAGCATTTACGCATGGTTCTAGAAACCCTTCGAGCTAATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAGGTATCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAACTAAGATAGAGGCAGTCACCAGTTGGCCCCAACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGTTTTGTGGAGAACTTTTCCCTTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGCTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAAACAGAAGCTAGTTACTGTACCGATTCTTACGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAAATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATATTATATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATTTTGAGAGGGCTGAGATTGTAGTGTCAGTAGGGGCAGTCACCATGCATTTAGCCCAGTTGACGGTACAGCCGACCTTGAGGCAGAAGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAGCGTGGCCTAGCAGAAGTAGGCAAGCTGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCAACAGTTCCCCATTTTTTATGCACTCGGATAGTACGAAGATGTATCAGGACCTGAAACGGGTTTATTGGTGGCGTAATATGAAGAGAGAGGTGGAAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCACCAACGCAGAAACCAACGGGTTTATTACAACCCTTGAGCGTACCGAAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACGGGACTACCTAGAACTTTGAGGAGTTTTACAGTGATTTGGGTTGTGGTTGACAGGCTTACCAAATCAGCACGCTTCATTTCGGGTAAATCCACCTATATAGCTAGTAAGTGGGCACAGTTGTACATGTCTGAAATAGTGAGACTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCATGCTGCTTTTCAGTTCAACGCTAGTCTGCAGCCGCCGCACGTTGCCTCGTTCGTCTGCGGTAGTGGAAGCCCGACCGTCGTTCAAACTCCGTCAATCCTTTTGCCTTGCTGTTTGACGCCTCACCTTCACCTTCGCTTTCGTTTGGTTTCGCCGTCGGCCCTCCCAATCTCCACTTCGTATCCAGCCAATGCCACCGTCGTCACTGTCCGTTCGTTTTGA

Coding sequence (CDS)

ATGCGCCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAATAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCTATAGTGTTTTCTAAGATTGACCTTCGGTCAGGATATCATCAGCTGAGGATTAAGGATAGGGATGTACCAAAGACAACCTTTCGTTCCAGATATGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGATGAATGCTCCGACAGTGTTTATGGATTTGATGAACAAAGTGTTTAGGGAGTTCCTAGACACTTTTCTGATCGTGTTTATCGATGATATTTTGATATATTCCAAGACAGAGGCCGAGCATGAGGAGCATTTACGCATGGTTCTAGAAACCCTTCGAGCTAATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAGGTATCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAACTAAGATAGAGGCAGTCACCAGTTGGCCCCAACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGTTTTGTGGAGAACTTTTCCCTTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGCTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAAACAGAAGCTAGTTACTGTACCGATTCTTACGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAAATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATATTATATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATTTTGAGAGGGCTGAGATTGTAGTGTCAGTAGGGGCAGTCACCATGCATTTAGCCCAGTTGACGGTACAGCCGACCTTGAGGCAGAAGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAGCGTGGCCTAGCAGAAGTAGGCAAGCTGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCAACAGTTCCCCATTTTTTATGCACTCGGATAGTACGAAGATGTATCAGGACCTGAAACGGGTTTATTGGTGGCGTAATATGAAGAGAGAGGTGGAAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCACCAACGCAGAAACCAACGGGTTTATTACAACCCTTGAGCGTACCGAAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACGGGACTACCTAGAACTTTGAGGAGTTTTACAGTGATTTGGGTTGTGGTTGACAGGCTTACCAAATCAGCACGCTTCATTTCGGGTAAATCCACCTATATAGCTAGTAAGTGGGCACAGTTGTACATGTCTGAAATAGTGAGACTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCATGCTGCTTTTCAGTTCAACGCTAGTCTGCAGCCGCCGCACGTTGCCTCGTTCGTCTGCGGTAGTGGAAGCCCGACCGTCGTTCAAACTCCGTCAATCCTTTTGCCTTGCTGTTTGACGCCTCACCTTCACCTTCGCTTTCGTTTGGTTTCGCCGTCGGCCCTCCCAATCTCCACTTCGTATCCAGCCAATGCCACCGTCGTCACTGTCCGTTCGTTTTGA

Protein sequence

MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKIDLRSGYHQLRIKDRDVPKTTFRSRYGHYEFIVMSFGLMNAPTVFMDLMNKVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTKIEAVTSWPQPSTVSEVRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSFQNLKTEASYCTDSYELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDFERAEIVVSVGAVTMHLAQLTVQPTLRQKIIDAQSNDPYLVEKRGLAEVGKLLSSPYPLMVDFCLRGASVCHQIVRLKQNYYLRLNSSPFFMHSDSTKMYQDLKRVYWWRNMKREVEEFVSKCLVCQQVKAPRQKPPTQKPTGLLQPLSVPKWKWENVSMDFITGLPRTLRSFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLHAAFQFNASLQPPHVASFVCGSGSPTVVQTPSILLPCCLTPHLHLRFRLVSPSALPISTSYPANATVVTVRSF

Homology

[Close]

BLAST of Cmc04g0101961 vs. NCBI nr
Match: TYK07181.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1007.7 bits (2604), Expect = 4.6e-290
Identity = 521/604 (86.26%), Postives = 526/604 (87.09%), Query Frame = 0


Query: 46   YHQLRIKDRDVPKTTFRSRYGHYEFIVMSFGLMNAPTVFMDLMNKVFREFLDTFLIVFID 105
            YHQLRIKDRDVPKTTFRSRYGHYEFIVMSFGLMNAP VFMDLMNKVFREFLDTFLIVFID
Sbjct: 548  YHQLRIKDRDVPKTTFRSRYGHYEFIVMSFGLMNAPAVFMDLMNKVFREFLDTFLIVFID 607

Query: 106  DILIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTK 165
            DILIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTK
Sbjct: 608  DILIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTK 667

Query: 166  IEAVTSWPQPSTVSEVRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSF 225
            IEAVTSWPQPSTVSEVRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSF
Sbjct: 668  IEAVTSWPQPSTVSEVRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSF 727

Query: 226  QNLKT------------------------EASYCTDSYELAAVVFALKIWRHYLYGEKIQ 285
            QNLK                         E +Y T   ELAAVVFALKIWRHYLYGEKIQ
Sbjct: 728  QNLKQKLVTVPILTQGKVVTYTFRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ 787

Query: 286  IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALI 345
            IFTDHKSLKYFFTQKELNMRQ+RWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALI
Sbjct: 788  IFTDHKSLKYFFTQKELNMRQQRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALI 847

Query: 346  TRQAPLHRDFERAEIVVSVGAVTMHLAQLTVQPTLRQKIIDAQSNDPYLVEKRGLAEVGK 405
            TRQAPLHRDFERAEIVVSVGAVTMHLAQLTVQ TLRQKIIDAQSNDPYL           
Sbjct: 848  TRQAPLHRDFERAEIVVSVGAVTMHLAQLTVQSTLRQKIIDAQSNDPYLRR--------- 907

Query: 406  LLSSPYPLMVDFCLRGASVCHQIVRLKQNYYLRLNSSPFFMHSDSTKMYQDLKRVYWWRN 465
                        C+   S       +K       +SSPFFMHSDSTKMYQDLKRVYWWRN
Sbjct: 908  -----------LCVPSDSA------VKTELLSEAHSSPFFMHSDSTKMYQDLKRVYWWRN 967

Query: 466  MKREVEEFVSKCLVCQQVKAPRQKPPTQKPTGLLQPLSVPKWKWENVSMDFITGLPRTLR 525
            MKREVEEFVSKCLVCQQVKAPRQKPP QKPTGLLQPLSVPKWKWENVSMDFITGLPRTLR
Sbjct: 968  MKREVEEFVSKCLVCQQVKAPRQKPPRQKPTGLLQPLSVPKWKWENVSMDFITGLPRTLR 1027

Query: 526  SFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 585
            SFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIVRLHGVPVSIVSDRDA FTSKF
Sbjct: 1028 SFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIVRLHGVPVSIVSDRDACFTSKF 1087

Query: 586  WKGLHAAFQFNASLQPPHVASFVCGSGSPTVVQTPSILLPCCLTPHLHLRFRLVSPSALP 626
            WKGLHAAFQFNASLQ PHVASFVCGSGSPTVVQTPSILLPC  TPHLHLRFRLVSPSALP
Sbjct: 1088 WKGLHAAFQFNASLQLPHVASFVCGSGSPTVVQTPSILLPCRSTPHLHLRFRLVSPSALP 1125

[Close]

BLAST of Cmc04g0101961 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 943.7 bits (2438), Expect = 8.1e-271
Identity = 492/623 (78.97%), Postives = 507/623 (81.38%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKIDLRSGYHQLRIKDRDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 876  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 935

Query: 61   FRSRYGHYEFIVMSFGLMNAPTVFMDLMNKVFREFLDTFLIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGL NAP VFMDLMN+VFREFLDTF+IVFIDDILIYSKTEAEHEEH
Sbjct: 936  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 995

Query: 121  LRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTKIEAVTSWPQPSTVSE 180
            LRMVL+TLR NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDP KIEAVT W +PSTVSE
Sbjct: 996  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 1055

Query: 181  VRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSFQNLKT---------- 240
            VRSFLGLAGYYRRFVENFS IATPLTQLTRKGAPF WSKACEDSFQ LK           
Sbjct: 1056 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTV 1115

Query: 241  ---------------------------------------EASYCTDSYELAAVVFALKIW 300
                                                   E +Y T   ELAAVVFALKIW
Sbjct: 1116 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 1175

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 1176 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1235

Query: 361  RKVSHSAALITRQAPLHRDFERAEIVVSVGAVTMHLAQLTVQPTLRQKIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRD ERAEI VSVGAVTM LAQLTVQPTLRQ+IIDAQSNDPYLV
Sbjct: 1236 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1295

Query: 421  EKRGLAEVGKL----LSSPYPLMVD--FCLRGASVCHQIVRLKQNYYLRLNSSPFFMHSD 480
            EKRGLAE G+     LSS   L+ +   C+   S       +K       +SSPF MH  
Sbjct: 1296 EKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSA------VKTELLSEAHSSPFSMHPG 1355

Query: 481  STKMYQDLKRVYWWRNMKREVEEFVSKCLVCQQVKAPRQKPPTQKPTGLLQPLSVPKWKW 540
            STKMYQDLKRVYWWRNMKREV EFVSKCLVCQQVKAPR     QKP GLLQPLS+P+WKW
Sbjct: 1356 STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR-----QKPAGLLQPLSIPEWKW 1415

Query: 541  ENVSMDFITGLPRTLRSFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIVRLHGV 569
            ENVSMDFITGLPRTLR FTVIWVVVDRLTKSA F+ GKSTY ASKWAQLYMSEIVRLHGV
Sbjct: 1416 ENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV 1475

[Close]

BLAST of Cmc04g0101961 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 941.4 bits (2432), Expect = 4.0e-270
Identity = 490/623 (78.65%), Postives = 508/623 (81.54%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKIDLRSGYHQLRIKDRDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 622  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 681

Query: 61   FRSRYGHYEFIVMSFGLMNAPTVFMDLMNKVFREFLDTFLIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGL NAP VFMDLMN+VFREFLDTF+IVFIDDILIYSKTEAEHEEH
Sbjct: 682  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 741

Query: 121  LRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTKIEAVTSWPQPSTVSE 180
            LRMVL+TLR NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDP KIEAVT W +PSTVSE
Sbjct: 742  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 801

Query: 181  VRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSFQNLKT---------- 240
            VRSFLGLAGYYRRFVENFS IATPLTQLTRKGAPF WSKACEDSFQNLK           
Sbjct: 802  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 861

Query: 241  ---------------------------------------EASYCTDSYELAAVVFALKIW 300
                                                   E +Y T   ELAAVVFALKIW
Sbjct: 862  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 921

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 922  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 981

Query: 361  RKVSHSAALITRQAPLHRDFERAEIVVSVGAVTMHLAQLTVQPTLRQKIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRD ERAEI VSVGAVTM LAQLTVQPTLRQ+IIDAQSNDPYLV
Sbjct: 982  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1041

Query: 421  EKRGLAEVGKL----LSSPYPLMVD--FCLRGASVCHQIVRLKQNYYLRLNSSPFFMHSD 480
            EKRGLAE G+     LSS   L+ +   C+   SV      +K       +SSPF MH  
Sbjct: 1042 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSV------VKTELLSEAHSSPFSMHPG 1101

Query: 481  STKMYQDLKRVYWWRNMKREVEEFVSKCLVCQQVKAPRQKPPTQKPTGLLQPLSVPKWKW 540
            STKMY+D+KRVYWWRNMKREV EFVS+CLVCQQVKAPR     QKP GLLQPLS+P+WKW
Sbjct: 1102 STKMYRDVKRVYWWRNMKREVAEFVSRCLVCQQVKAPR-----QKPAGLLQPLSIPEWKW 1161

Query: 541  ENVSMDFITGLPRTLRSFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIVRLHGV 569
            ENVSMDFITGLPRTLR FTVIWVVVDRLTKSA F+ GKSTY ASKWAQLYMSEIVRLHGV
Sbjct: 1162 ENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV 1221

[Close]

BLAST of Cmc04g0101961 vs. NCBI nr
Match: KAA0059792.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 939.5 bits (2427), Expect = 1.5e-269
Identity = 496/670 (74.03%), Postives = 521/670 (77.76%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKIDLRSGYHQLRIKDRDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 400  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 459

Query: 61   FRSRYGHYEFIVMSFGLMNAPTVFMDLMNKVFREFLDTFLIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEF+VMSFGL NAPTVFMDLMN+VFREFLDTF+IVFIDDILIYSKTEAEHEEH
Sbjct: 460  FRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 519

Query: 121  LRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTKIEAVTSWPQPSTVSE 180
            LR VL+TLR NKLYAKFSKCEFWLKQVSFLGHV+SK GVSVDP KIEAVT W +PSTVSE
Sbjct: 520  LRKVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVISKVGVSVDPAKIEAVTGWTRPSTVSE 579

Query: 181  VRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSFQNLKT---------- 240
            VRSFLGLAGYYRRFVENFS IATPLTQLTRKGAPF WSKACEDSFQNLK           
Sbjct: 580  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 639

Query: 241  ---------------------------------------EASYCTDSYELAAVVFALKIW 300
                                                   E +Y T   ELAAVVFALKIW
Sbjct: 640  PDGSGSFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 699

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 700  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 759

Query: 361  RKVSHSAALITRQAPLHRDFERAEIVVSVGAVTMHLAQLTVQPTLRQKIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRD ERAEI VSVGAVTM LAQLTVQPTLRQ+IIDAQSNDPYLV
Sbjct: 760  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 819

Query: 421  EKRGLAEVGKL----LSSPYPLMVD--FCLRGASVCHQIVRLKQNYYLRLNSSPFFMHSD 480
            EKRGLAE G+     LSS   L+ +   C+   SV      +K        SSPF MH  
Sbjct: 820  EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSV------VKTELLSEAQSSPFSMHPG 879

Query: 481  STKMYQDLKRVYWWRNMKREVEEFVSKCLVCQQVKAPRQKPPTQKPTGLLQPLSVPKWKW 540
            STKMYQDL+RVYWWRNMKREV EFVS+CLVCQQVKAPR     QKP GLLQPLS+P+WKW
Sbjct: 880  STKMYQDLRRVYWWRNMKREVAEFVSRCLVCQQVKAPR-----QKPAGLLQPLSIPEWKW 939

Query: 541  ENVSMDFITGLPRTLRSFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIVRLHGV 600
            ENVSMDFITGLPRTLR FTVIWVVVDRLTKSA F+ GKSTY ASKWAQLYMSEIVRLHGV
Sbjct: 940  ENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV 999

Query: 601  PVSIVSDRDARFTSKFWKGLHAA----FQFNASLQPPHVASFVC-GSGSPTVVQTPSILL 611
            PV IVSDRDARFTSKFWKGL  A      F+ +  P       C       +++  ++  
Sbjct: 1000 PVLIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTECLNQVLEDMLRAYALEF 1058

[Close]

BLAST of Cmc04g0101961 vs. NCBI nr
Match: KAA0051357.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 939.5 bits (2427), Expect = 1.5e-269
Identity = 485/617 (78.61%), Postives = 499/617 (80.88%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKIDLRSGYHQLRIKDRDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDLRSGY+QLRIKD DVPKT 
Sbjct: 612  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTA 671

Query: 61   FRSRYGHYEFIVMSFGLMNAPTVFMDLMNKVFREFLDTFLIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGL NAP VFMDLMN+VFREFLDTF+IVFIDDILIYSKTEAEHEEH
Sbjct: 672  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 731

Query: 121  LRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTKIEAVTSWPQPSTVSE 180
            LRMVL+TLR NKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDP KIEAVT W +PSTVSE
Sbjct: 732  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSE 791

Query: 181  VRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSFQNLKT---------- 240
            VRSFLGLAGYYRRFVENFS IATPLTQLTRKGAPF WSKACEDSFQNLK           
Sbjct: 792  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 851

Query: 241  ---------------------------------------EASYCTDSYELAAVVFALKIW 300
                                                   E +Y T   ELAAVVFALKIW
Sbjct: 852  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 911

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 912  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 971

Query: 361  RKVSHSAALITRQAPLHRDFERAEIVVSVGAVTMHLAQLTVQPTLRQKIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRD ERAEI VSVGAVTM LAQLTVQPTLRQ+IIDAQSNDPYLV
Sbjct: 972  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1031

Query: 421  EKRGLAEVGKLLSSPYPLMVDFCLRGASVCHQIVRLKQNYYLRLNSSPFFMHSDSTKMYQ 480
            EKRGLAE G+ +             G         +K       +SSPF MH  STKMYQ
Sbjct: 1032 EKRGLAEAGQAVEFSLSSDGGLSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQ 1091

Query: 481  DLKRVYWWRNMKREVEEFVSKCLVCQQVKAPRQKPPTQKPTGLLQPLSVPKWKWENVSMD 540
            DLKRVYWWRNMKREV EFVSKCLVCQQVK PR     QKP GLLQPLS+P+WKWENVSMD
Sbjct: 1092 DLKRVYWWRNMKREVAEFVSKCLVCQQVKEPR-----QKPAGLLQPLSIPEWKWENVSMD 1151

Query: 541  FITGLPRTLRSFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIVRLHGVPVSIVS 569
            FITGLPRTLR FTVIWVVVDRLTKSA F+ GKSTY ASKWAQLYMSEIVRLHGVPVSIVS
Sbjct: 1152 FITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVS 1211

[Close]

BLAST of Cmc04g0101961 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.3e-77
Identity = 188/667 (28.19%), Postives = 314/667 (47.08%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKIDLRSGYHQLRIKDRDVPKTT 60
            +R+ +DY+ LNK    N YPLP I+ L  ++QG+ +F+K+DL+S YH +R++  D  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVMSFGLMNAPTVFMDLMNKVFREFLDTFLIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G+  AP  F   +N +  E  ++ ++ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTKIEAVTSWPQPSTVSE 180
            ++ VL+ L+   L    +KCEF   QV F+G+ +S+ G +     I+ V  W QP    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSFQNLK----------- 240
            +R FLG   Y R+F+   S +  PL  L +K   + W+     + +N+K           
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  ----------TEAS---------------------------------YCTDSYELAAVVF 300
                      T+AS                                 Y     E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVSHSAALITRQAPLHRDFERAEI--VVSVGAVTMHLAQLTVQPTLRQKI 420
            AN +ADALSR       ++    P+ +D E   I  V  +        Q+  + T   K+
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKL 881

Query: 421  IDAQSNDPYLVEKRGLAEVGKLLSSPYPLMVDFCLRGASVCHQIVRLKQNYYLRLNSSPF 480
            ++  +N+   VE+    + G L++S   +++              +L +    + +    
Sbjct: 882  LNLLNNEDKRVEENIQLKDGLLINSKDQILLP----------NDTQLTRTIIKKYHEEGK 941

Query: 481  FMHSDSTKMYQDLKRVYWWRNMKREVEEFVSKCLVCQQVKAPRQKPPTQKPTGLLQPLSV 540
             +H     +   + R + W+ ++++++E+V  C  CQ       K    KP G LQP+  
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQ-----INKSRNHKPYGPLQPIPP 1001

Query: 541  PKWKWENVSMDFITGLPRTLRSFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIV 600
             +  WE++SMDFIT LP +   +  ++VVVDR +K A  +    +  A + A+++   ++
Sbjct: 1002 SERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVI 1061

Query: 601  RLHGVPVSIVSDRDARFTSKFWKGLHAAFQFNASLQPPHVASFVCGSGSPTVVQTPSILL 608
               G P  I++D D  FTS+ WK     + F      P+         +    QT   LL
Sbjct: 1062 AYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQ--TDGQTERTNQTVEKLL 1103

[Close]

BLAST of Cmc04g0101961 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.3e-77
Identity = 188/667 (28.19%), Postives = 314/667 (47.08%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKIDLRSGYHQLRIKDRDVPKTT 60
            +R+ +DY+ LNK    N YPLP I+ L  ++QG+ +F+K+DL+S YH +R++  D  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVMSFGLMNAPTVFMDLMNKVFREFLDTFLIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G+  AP  F   +N +  E  ++ ++ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTKIEAVTSWPQPSTVSE 180
            ++ VL+ L+   L    +KCEF   QV F+G+ +S+ G +     I+ V  W QP    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSFQNLK----------- 240
            +R FLG   Y R+F+   S +  PL  L +K   + W+     + +N+K           
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  ----------TEAS---------------------------------YCTDSYELAAVVF 300
                      T+AS                                 Y     E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVSHSAALITRQAPLHRDFERAEI--VVSVGAVTMHLAQLTVQPTLRQKI 420
            AN +ADALSR       ++    P+ +D E   I  V  +        Q+  + T   K+
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKL 881

Query: 421  IDAQSNDPYLVEKRGLAEVGKLLSSPYPLMVDFCLRGASVCHQIVRLKQNYYLRLNSSPF 480
            ++  +N+   VE+    + G L++S   +++              +L +    + +    
Sbjct: 882  LNLLNNEDKRVEENIQLKDGLLINSKDQILLP----------NDTQLTRTIIKKYHEEGK 941

Query: 481  FMHSDSTKMYQDLKRVYWWRNMKREVEEFVSKCLVCQQVKAPRQKPPTQKPTGLLQPLSV 540
             +H     +   + R + W+ ++++++E+V  C  CQ       K    KP G LQP+  
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQ-----INKSRNHKPYGPLQPIPP 1001

Query: 541  PKWKWENVSMDFITGLPRTLRSFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIV 600
             +  WE++SMDFIT LP +   +  ++VVVDR +K A  +    +  A + A+++   ++
Sbjct: 1002 SERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVI 1061

Query: 601  RLHGVPVSIVSDRDARFTSKFWKGLHAAFQFNASLQPPHVASFVCGSGSPTVVQTPSILL 608
               G P  I++D D  FTS+ WK     + F      P+         +    QT   LL
Sbjct: 1062 AYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQ--TDGQTERTNQTVEKLL 1103

[Close]

BLAST of Cmc04g0101961 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.3e-77
Identity = 188/667 (28.19%), Postives = 314/667 (47.08%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKIDLRSGYHQLRIKDRDVPKTT 60
            +R+ +DY+ LNK    N YPLP I+ L  ++QG+ +F+K+DL+S YH +R++  D  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVMSFGLMNAPTVFMDLMNKVFREFLDTFLIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G+  AP  F   +N +  E  ++ ++ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTKIEAVTSWPQPSTVSE 180
            ++ VL+ L+   L    +KCEF   QV F+G+ +S+ G +     I+ V  W QP    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSFQNLK----------- 240
            +R FLG   Y R+F+   S +  PL  L +K   + W+     + +N+K           
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  ----------TEAS---------------------------------YCTDSYELAAVVF 300
                      T+AS                                 Y     E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVSHSAALITRQAPLHRDFERAEI--VVSVGAVTMHLAQLTVQPTLRQKI 420
            AN +ADALSR       ++    P+ +D E   I  V  +        Q+  + T   K+
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKL 881

Query: 421  IDAQSNDPYLVEKRGLAEVGKLLSSPYPLMVDFCLRGASVCHQIVRLKQNYYLRLNSSPF 480
            ++  +N+   VE+    + G L++S   +++              +L +    + +    
Sbjct: 882  LNLLNNEDKRVEENIQLKDGLLINSKDQILLP----------NDTQLTRTIIKKYHEEGK 941

Query: 481  FMHSDSTKMYQDLKRVYWWRNMKREVEEFVSKCLVCQQVKAPRQKPPTQKPTGLLQPLSV 540
             +H     +   + R + W+ ++++++E+V  C  CQ       K    KP G LQP+  
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQ-----INKSRNHKPYGPLQPIPP 1001

Query: 541  PKWKWENVSMDFITGLPRTLRSFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIV 600
             +  WE++SMDFIT LP +   +  ++VVVDR +K A  +    +  A + A+++   ++
Sbjct: 1002 SERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVI 1061

Query: 601  RLHGVPVSIVSDRDARFTSKFWKGLHAAFQFNASLQPPHVASFVCGSGSPTVVQTPSILL 608
               G P  I++D D  FTS+ WK     + F      P+         +    QT   LL
Sbjct: 1062 AYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQ--TDGQTERTNQTVEKLL 1103

[Close]

BLAST of Cmc04g0101961 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.3e-77
Identity = 188/667 (28.19%), Postives = 314/667 (47.08%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKIDLRSGYHQLRIKDRDVPKTT 60
            +R+ +DY+ LNK    N YPLP I+ L  ++QG+ +F+K+DL+S YH +R++  D  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVMSFGLMNAPTVFMDLMNKVFREFLDTFLIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G+  AP  F   +N +  E  ++ ++ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTKIEAVTSWPQPSTVSE 180
            ++ VL+ L+   L    +KCEF   QV F+G+ +S+ G +     I+ V  W QP    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSFQNLK----------- 240
            +R FLG   Y R+F+   S +  PL  L +K   + W+     + +N+K           
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  ----------TEAS---------------------------------YCTDSYELAAVVF 300
                      T+AS                                 Y     E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVSHSAALITRQAPLHRDFERAEI--VVSVGAVTMHLAQLTVQPTLRQKI 420
            AN +ADALSR       ++    P+ +D E   I  V  +        Q+  + T   K+
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKL 881

Query: 421  IDAQSNDPYLVEKRGLAEVGKLLSSPYPLMVDFCLRGASVCHQIVRLKQNYYLRLNSSPF 480
            ++  +N+   VE+    + G L++S   +++              +L +    + +    
Sbjct: 882  LNLLNNEDKRVEENIQLKDGLLINSKDQILLP----------NDTQLTRTIIKKYHEEGK 941

Query: 481  FMHSDSTKMYQDLKRVYWWRNMKREVEEFVSKCLVCQQVKAPRQKPPTQKPTGLLQPLSV 540
             +H     +   + R + W+ ++++++E+V  C  CQ       K    KP G LQP+  
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQ-----INKSRNHKPYGPLQPIPP 1001

Query: 541  PKWKWENVSMDFITGLPRTLRSFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIV 600
             +  WE++SMDFIT LP +   +  ++VVVDR +K A  +    +  A + A+++   ++
Sbjct: 1002 SERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVI 1061

Query: 601  RLHGVPVSIVSDRDARFTSKFWKGLHAAFQFNASLQPPHVASFVCGSGSPTVVQTPSILL 608
               G P  I++D D  FTS+ WK     + F      P+         +    QT   LL
Sbjct: 1062 AYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQ--TDGQTERTNQTVEKLL 1103

[Close]

BLAST of Cmc04g0101961 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.3e-77
Identity = 188/667 (28.19%), Postives = 314/667 (47.08%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKIDLRSGYHQLRIKDRDVPKTT 60
            +R+ +DY+ LNK    N YPLP I+ L  ++QG+ +F+K+DL+S YH +R++  D  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVMSFGLMNAPTVFMDLMNKVFREFLDTFLIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G+  AP  F   +N +  E  ++ ++ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTKIEAVTSWPQPSTVSE 180
            ++ VL+ L+   L    +KCEF   QV F+G+ +S+ G +     I+ V  W QP    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSFQNLK----------- 240
            +R FLG   Y R+F+   S +  PL  L +K   + W+     + +N+K           
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  ----------TEAS---------------------------------YCTDSYELAAVVF 300
                      T+AS                                 Y     E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVSHSAALITRQAPLHRDFERAEI--VVSVGAVTMHLAQLTVQPTLRQKI 420
            AN +ADALSR       ++    P+ +D E   I  V  +        Q+  + T   K+
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKL 881

Query: 421  IDAQSNDPYLVEKRGLAEVGKLLSSPYPLMVDFCLRGASVCHQIVRLKQNYYLRLNSSPF 480
            ++  +N+   VE+    + G L++S   +++              +L +    + +    
Sbjct: 882  LNLLNNEDKRVEENIQLKDGLLINSKDQILLP----------NDTQLTRTIIKKYHEEGK 941

Query: 481  FMHSDSTKMYQDLKRVYWWRNMKREVEEFVSKCLVCQQVKAPRQKPPTQKPTGLLQPLSV 540
             +H     +   + R + W+ ++++++E+V  C  CQ       K    KP G LQP+  
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQ-----INKSRNHKPYGPLQPIPP 1001

Query: 541  PKWKWENVSMDFITGLPRTLRSFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIV 600
             +  WE++SMDFIT LP +   +  ++VVVDR +K A  +    +  A + A+++   ++
Sbjct: 1002 SERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVI 1061

Query: 601  RLHGVPVSIVSDRDARFTSKFWKGLHAAFQFNASLQPPHVASFVCGSGSPTVVQTPSILL 608
               G P  I++D D  FTS+ WK     + F      P+         +    QT   LL
Sbjct: 1062 AYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQ--TDGQTERTNQTVEKLL 1103

[Close]

BLAST of Cmc04g0101961 vs. ExPASy TrEMBL
Match: A0A5D3C5J7 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00640 PE=4 SV=1)

HSP 1 Score: 1007.7 bits (2604), Expect = 2.2e-290
Identity = 521/604 (86.26%), Postives = 526/604 (87.09%), Query Frame = 0


Query: 46   YHQLRIKDRDVPKTTFRSRYGHYEFIVMSFGLMNAPTVFMDLMNKVFREFLDTFLIVFID 105
            YHQLRIKDRDVPKTTFRSRYGHYEFIVMSFGLMNAP VFMDLMNKVFREFLDTFLIVFID
Sbjct: 548  YHQLRIKDRDVPKTTFRSRYGHYEFIVMSFGLMNAPAVFMDLMNKVFREFLDTFLIVFID 607

Query: 106  DILIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTK 165
            DILIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTK
Sbjct: 608  DILIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTK 667

Query: 166  IEAVTSWPQPSTVSEVRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSF 225
            IEAVTSWPQPSTVSEVRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSF
Sbjct: 668  IEAVTSWPQPSTVSEVRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSF 727

Query: 226  QNLKT------------------------EASYCTDSYELAAVVFALKIWRHYLYGEKIQ 285
            QNLK                         E +Y T   ELAAVVFALKIWRHYLYGEKIQ
Sbjct: 728  QNLKQKLVTVPILTQGKVVTYTFRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ 787

Query: 286  IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALI 345
            IFTDHKSLKYFFTQKELNMRQ+RWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALI
Sbjct: 788  IFTDHKSLKYFFTQKELNMRQQRWLELVKDYDCEILYHPGKTNVVADALSRKVSHSAALI 847

Query: 346  TRQAPLHRDFERAEIVVSVGAVTMHLAQLTVQPTLRQKIIDAQSNDPYLVEKRGLAEVGK 405
            TRQAPLHRDFERAEIVVSVGAVTMHLAQLTVQ TLRQKIIDAQSNDPYL           
Sbjct: 848  TRQAPLHRDFERAEIVVSVGAVTMHLAQLTVQSTLRQKIIDAQSNDPYLRR--------- 907

Query: 406  LLSSPYPLMVDFCLRGASVCHQIVRLKQNYYLRLNSSPFFMHSDSTKMYQDLKRVYWWRN 465
                        C+   S       +K       +SSPFFMHSDSTKMYQDLKRVYWWRN
Sbjct: 908  -----------LCVPSDSA------VKTELLSEAHSSPFFMHSDSTKMYQDLKRVYWWRN 967

Query: 466  MKREVEEFVSKCLVCQQVKAPRQKPPTQKPTGLLQPLSVPKWKWENVSMDFITGLPRTLR 525
            MKREVEEFVSKCLVCQQVKAPRQKPP QKPTGLLQPLSVPKWKWENVSMDFITGLPRTLR
Sbjct: 968  MKREVEEFVSKCLVCQQVKAPRQKPPRQKPTGLLQPLSVPKWKWENVSMDFITGLPRTLR 1027

Query: 526  SFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 585
            SFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIVRLHGVPVSIVSDRDA FTSKF
Sbjct: 1028 SFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIVRLHGVPVSIVSDRDACFTSKF 1087

Query: 586  WKGLHAAFQFNASLQPPHVASFVCGSGSPTVVQTPSILLPCCLTPHLHLRFRLVSPSALP 626
            WKGLHAAFQFNASLQ PHVASFVCGSGSPTVVQTPSILLPC  TPHLHLRFRLVSPSALP
Sbjct: 1088 WKGLHAAFQFNASLQLPHVASFVCGSGSPTVVQTPSILLPCRSTPHLHLRFRLVSPSALP 1125

[Close]

BLAST of Cmc04g0101961 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 943.7 bits (2438), Expect = 3.9e-271
Identity = 492/623 (78.97%), Postives = 507/623 (81.38%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKIDLRSGYHQLRIKDRDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 876  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 935

Query: 61   FRSRYGHYEFIVMSFGLMNAPTVFMDLMNKVFREFLDTFLIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGL NAP VFMDLMN+VFREFLDTF+IVFIDDILIYSKTEAEHEEH
Sbjct: 936  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 995

Query: 121  LRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTKIEAVTSWPQPSTVSE 180
            LRMVL+TLR NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDP KIEAVT W +PSTVSE
Sbjct: 996  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 1055

Query: 181  VRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSFQNLKT---------- 240
            VRSFLGLAGYYRRFVENFS IATPLTQLTRKGAPF WSKACEDSFQ LK           
Sbjct: 1056 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTV 1115

Query: 241  ---------------------------------------EASYCTDSYELAAVVFALKIW 300
                                                   E +Y T   ELAAVVFALKIW
Sbjct: 1116 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 1175

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 1176 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1235

Query: 361  RKVSHSAALITRQAPLHRDFERAEIVVSVGAVTMHLAQLTVQPTLRQKIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRD ERAEI VSVGAVTM LAQLTVQPTLRQ+IIDAQSNDPYLV
Sbjct: 1236 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1295

Query: 421  EKRGLAEVGKL----LSSPYPLMVD--FCLRGASVCHQIVRLKQNYYLRLNSSPFFMHSD 480
            EKRGLAE G+     LSS   L+ +   C+   S       +K       +SSPF MH  
Sbjct: 1296 EKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSA------VKTELLSEAHSSPFSMHPG 1355

Query: 481  STKMYQDLKRVYWWRNMKREVEEFVSKCLVCQQVKAPRQKPPTQKPTGLLQPLSVPKWKW 540
            STKMYQDLKRVYWWRNMKREV EFVSKCLVCQQVKAPR     QKP GLLQPLS+P+WKW
Sbjct: 1356 STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPR-----QKPAGLLQPLSIPEWKW 1415

Query: 541  ENVSMDFITGLPRTLRSFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIVRLHGV 569
            ENVSMDFITGLPRTLR FTVIWVVVDRLTKSA F+ GKSTY ASKWAQLYMSEIVRLHGV
Sbjct: 1416 ENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV 1475

[Close]

BLAST of Cmc04g0101961 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 941.4 bits (2432), Expect = 1.9e-270
Identity = 490/623 (78.65%), Postives = 508/623 (81.54%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKIDLRSGYHQLRIKDRDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 622  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 681

Query: 61   FRSRYGHYEFIVMSFGLMNAPTVFMDLMNKVFREFLDTFLIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGL NAP VFMDLMN+VFREFLDTF+IVFIDDILIYSKTEAEHEEH
Sbjct: 682  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 741

Query: 121  LRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTKIEAVTSWPQPSTVSE 180
            LRMVL+TLR NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDP KIEAVT W +PSTVSE
Sbjct: 742  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 801

Query: 181  VRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSFQNLKT---------- 240
            VRSFLGLAGYYRRFVENFS IATPLTQLTRKGAPF WSKACEDSFQNLK           
Sbjct: 802  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 861

Query: 241  ---------------------------------------EASYCTDSYELAAVVFALKIW 300
                                                   E +Y T   ELAAVVFALKIW
Sbjct: 862  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 921

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 922  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 981

Query: 361  RKVSHSAALITRQAPLHRDFERAEIVVSVGAVTMHLAQLTVQPTLRQKIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRD ERAEI VSVGAVTM LAQLTVQPTLRQ+IIDAQSNDPYLV
Sbjct: 982  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1041

Query: 421  EKRGLAEVGKL----LSSPYPLMVD--FCLRGASVCHQIVRLKQNYYLRLNSSPFFMHSD 480
            EKRGLAE G+     LSS   L+ +   C+   SV      +K       +SSPF MH  
Sbjct: 1042 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSV------VKTELLSEAHSSPFSMHPG 1101

Query: 481  STKMYQDLKRVYWWRNMKREVEEFVSKCLVCQQVKAPRQKPPTQKPTGLLQPLSVPKWKW 540
            STKMY+D+KRVYWWRNMKREV EFVS+CLVCQQVKAPR     QKP GLLQPLS+P+WKW
Sbjct: 1102 STKMYRDVKRVYWWRNMKREVAEFVSRCLVCQQVKAPR-----QKPAGLLQPLSIPEWKW 1161

Query: 541  ENVSMDFITGLPRTLRSFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIVRLHGV 569
            ENVSMDFITGLPRTLR FTVIWVVVDRLTKSA F+ GKSTY ASKWAQLYMSEIVRLHGV
Sbjct: 1162 ENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV 1221

[Close]

BLAST of Cmc04g0101961 vs. ExPASy TrEMBL
Match: A0A5A7UAA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00800 PE=4 SV=1)

HSP 1 Score: 939.5 bits (2427), Expect = 7.4e-270
Identity = 485/617 (78.61%), Postives = 499/617 (80.88%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKIDLRSGYHQLRIKDRDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDLRSGY+QLRIKD DVPKT 
Sbjct: 612  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTA 671

Query: 61   FRSRYGHYEFIVMSFGLMNAPTVFMDLMNKVFREFLDTFLIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGL NAP VFMDLMN+VFREFLDTF+IVFIDDILIYSKTEAEHEEH
Sbjct: 672  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 731

Query: 121  LRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTKIEAVTSWPQPSTVSE 180
            LRMVL+TLR NKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDP KIEAVT W +PSTVSE
Sbjct: 732  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSE 791

Query: 181  VRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSFQNLKT---------- 240
            VRSFLGLAGYYRRFVENFS IATPLTQLTRKGAPF WSKACEDSFQNLK           
Sbjct: 792  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 851

Query: 241  ---------------------------------------EASYCTDSYELAAVVFALKIW 300
                                                   E +Y T   ELAAVVFALKIW
Sbjct: 852  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 911

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 912  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 971

Query: 361  RKVSHSAALITRQAPLHRDFERAEIVVSVGAVTMHLAQLTVQPTLRQKIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRD ERAEI VSVGAVTM LAQLTVQPTLRQ+IIDAQSNDPYLV
Sbjct: 972  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1031

Query: 421  EKRGLAEVGKLLSSPYPLMVDFCLRGASVCHQIVRLKQNYYLRLNSSPFFMHSDSTKMYQ 480
            EKRGLAE G+ +             G         +K       +SSPF MH  STKMYQ
Sbjct: 1032 EKRGLAEAGQAVEFSLSSDGGLSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQ 1091

Query: 481  DLKRVYWWRNMKREVEEFVSKCLVCQQVKAPRQKPPTQKPTGLLQPLSVPKWKWENVSMD 540
            DLKRVYWWRNMKREV EFVSKCLVCQQVK PR     QKP GLLQPLS+P+WKWENVSMD
Sbjct: 1092 DLKRVYWWRNMKREVAEFVSKCLVCQQVKEPR-----QKPAGLLQPLSIPEWKWENVSMD 1151

Query: 541  FITGLPRTLRSFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIVRLHGVPVSIVS 569
            FITGLPRTLR FTVIWVVVDRLTKSA F+ GKSTY ASKWAQLYMSEIVRLHGVPVSIVS
Sbjct: 1152 FITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVS 1211

[Close]

BLAST of Cmc04g0101961 vs. ExPASy TrEMBL
Match: A0A5A7UV42 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold108G00570 PE=4 SV=1)

HSP 1 Score: 939.5 bits (2427), Expect = 7.4e-270
Identity = 496/670 (74.03%), Postives = 521/670 (77.76%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKIDLRSGYHQLRIKDRDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA VFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 400  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 459

Query: 61   FRSRYGHYEFIVMSFGLMNAPTVFMDLMNKVFREFLDTFLIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEF+VMSFGL NAPTVFMDLMN+VFREFLDTF+IVFIDDILIYSKTEAEHEEH
Sbjct: 460  FRSRYGHYEFVVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 519

Query: 121  LRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPTKIEAVTSWPQPSTVSE 180
            LR VL+TLR NKLYAKFSKCEFWLKQVSFLGHV+SK GVSVDP KIEAVT W +PSTVSE
Sbjct: 520  LRKVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVISKVGVSVDPAKIEAVTGWTRPSTVSE 579

Query: 181  VRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSFQNLKT---------- 240
            VRSFLGLAGYYRRFVENFS IATPLTQLTRKGAPF WSKACEDSFQNLK           
Sbjct: 580  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 639

Query: 241  ---------------------------------------EASYCTDSYELAAVVFALKIW 300
                                                   E +Y T   ELAAVVFALKIW
Sbjct: 640  PDGSGSFVIYSDASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 699

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 700  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 759

Query: 361  RKVSHSAALITRQAPLHRDFERAEIVVSVGAVTMHLAQLTVQPTLRQKIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRD ERAEI VSVGAVTM LAQLTVQPTLRQ+IIDAQSNDPYLV
Sbjct: 760  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 819

Query: 421  EKRGLAEVGKL----LSSPYPLMVD--FCLRGASVCHQIVRLKQNYYLRLNSSPFFMHSD 480
            EKRGLAE G+     LSS   L+ +   C+   SV      +K        SSPF MH  
Sbjct: 820  EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSV------VKTELLSEAQSSPFSMHPG 879

Query: 481  STKMYQDLKRVYWWRNMKREVEEFVSKCLVCQQVKAPRQKPPTQKPTGLLQPLSVPKWKW 540
            STKMYQDL+RVYWWRNMKREV EFVS+CLVCQQVKAPR     QKP GLLQPLS+P+WKW
Sbjct: 880  STKMYQDLRRVYWWRNMKREVAEFVSRCLVCQQVKAPR-----QKPAGLLQPLSIPEWKW 939

Query: 541  ENVSMDFITGLPRTLRSFTVIWVVVDRLTKSARFISGKSTYIASKWAQLYMSEIVRLHGV 600
            ENVSMDFITGLPRTLR FTVIWVVVDRLTKSA F+ GKSTY ASKWAQLYMSEIVRLHGV
Sbjct: 940  ENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGV 999

Query: 601  PVSIVSDRDARFTSKFWKGLHAA----FQFNASLQPPHVASFVC-GSGSPTVVQTPSILL 611
            PV IVSDRDARFTSKFWKGL  A      F+ +  P       C       +++  ++  
Sbjct: 1000 PVLIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTECLNQVLEDMLRAYALEF 1058

[Close]

BLAST of Cmc04g0101961 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 1.6e-22
Identity = 50/112 (44.64%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 120 HLRMVLETLRANKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPTKIEAVTSWPQPST 179
           HL MVL+    ++ YA   KC F   Q+++LG  H++S  GVS DP K+EA+  WP+P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 180 VSEVRSFLGLAGYYRRFVENFSLIATPLTQLTRKGAPFAWSKACEDSFQNLK 230
            +E+R FLGL GYYRRFV+N+  I  PLT+L +K +   W++    +F+ LK
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALK 113

The following BLAST results are available for this feature:

BLAST of Cmc04g0101961 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK07181.1	4.6e-290	86.26	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	8.1e-271	78.97	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	4.0e-270	78.65	pol protein [Cucumis melo var. makuwa]	[more]
KAA0059792.1	1.5e-269	74.03	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051357.1	1.5e-269	78.61	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0101961 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	8.3e-77	28.19	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	8.3e-77	28.19	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	8.3e-77	28.19	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	8.3e-77	28.19	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	8.3e-77	28.19	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc04g0101961 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C5J7	2.2e-290	86.26	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BPI1	3.9e-271	78.97	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7U330	1.9e-270	78.65	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7UAA8	7.4e-270	78.61	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7UV42	7.4e-270	74.03	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold10...	[more]

BLAST of Cmc04g0101961 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.6e-22	44.64	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 19..154 e-value: 2.2E-65 score: 221.9
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 164..244 e-value: 1.7E-25 score: 90.8
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 3..153 e-value: 1.7E-24 score: 86.6
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..154 score: 11.171505
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 475..583 e-value: 1.2E-14 score: 56.1
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..79 e-value: 2.2E-65 score: 221.9
None	No IPR available	GENE3D	1.10.340.70		coord: 401..460 e-value: 2.6E-10 score: 42.4
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 229..564
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 2..229
None	No IPR available	PANTHER	PTHR34072:SF9	ENZYMATIC POLYPROTEIN-RELATED	coord: 2..229
None	No IPR available	PANTHER	PTHR34072:SF9	ENZYMATIC POLYPROTEIN-RELATED	coord: 229..564
None	No IPR available	CDD	cd01647	RT_LTR	coord: 2..154 e-value: 2.67064E-77 score: 242.116
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 229..314 e-value: 5.01749E-38 score: 134.928
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 422..461 e-value: 3.6E-12 score: 46.1
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 229..292 e-value: 1.3E-17 score: 64.0
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 478..579
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0101961.1	Cmc04g0101961.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding