Cmc04g0101391 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0101391
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
LocationCMiso1.1chr04: 17705324 .. 17706409 (+)
RNA-Seq ExpressionCmc04g0101391
SyntenyCmc04g0101391
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCAATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGCCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTAAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCAGTCTATGATAAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGCTTCTGAAACACCTTTAAAATTATGGAATGGTCATAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTTGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAAAAACTATTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCATTGAGGAAACCTCGACGAAGTGGGAGGGTTACAAACTTACTTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTATGAAGGAAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCAGTTTGGGACTTGTAG

mRNA sequence

ATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCAATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGCCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTAAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCAGTCTATGATAAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGCTTCTGAAACACCTTTAAAATTATGGAATGGTCATAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTTGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAAAAACTATTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCATTGAGGAAACCTCGACGAAGTGGGAGGGTTACAAACTTACTTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTATGAAGGAAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCAGTTTGGGACTTGTAG

Coding sequence (CDS)

ATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCAATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGCCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTAAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCAGTCTATGATAAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGCTTCTGAAACACCTTTAAAATTATGGAATGGTCATAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTTGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAAAAACTATTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCATTGAGGAAACCTCGACGAAGTGGGAGGGTTACAAACTTACTTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTATGAAGGAAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCAGTTTGGGACTTGTAG

Protein sequence

MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPEALEKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSASETPLKLWNGHKGSLRHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSGRVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWDL
Homology
[Close]
BLAST of Cmc04g0101391 vs. NCBI nr
Match: KAA0058447.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 746.5 bits (1926), Expect = 1.1e-211
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0 

Query: 1   MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPE 60
           MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPE
Sbjct: 204 MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPE 263

Query: 61  ALEKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
           ALEKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV
Sbjct: 264 ALEKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 323

Query: 121 SERRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSASETPLKLWNGHKGSL 180
           SERRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSASETPLKLWNGHKGSL
Sbjct: 324 SERRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSASETPLKLWNGHKGSL 383

Query: 181 RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
           RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 384 RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 443

Query: 241 DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG 300
           DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG
Sbjct: 444 DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG 503

Query: 301 RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD 360
           RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD
Sbjct: 504 RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD 563

Query: 361 L 362
           L
Sbjct: 564 L 564

[Close]
BLAST of Cmc04g0101391 vs. NCBI nr
Match: TYJ96709.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 737.6 bits (1903), Expect = 5.0e-209
Identity = 356/361 (98.61%), Postives = 359/361 (99.45%), Query Frame = 0 

Query: 1   MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPE 60
           MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK E
Sbjct: 1   MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 60

Query: 61  ALEKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
           ALEKFKEYKA+VENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV
Sbjct: 61  ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120

Query: 121 SERRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSASETPLKLWNGHKGSL 180
           SERRNRTLLDMV+SM+SYAHLPNSFWGYAVQTAVYILNCVPSKS SETPLKLWNGHKGSL
Sbjct: 121 SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGHKGSL 180

Query: 181 RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
           RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 181 RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240

Query: 241 DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG 300
           DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG
Sbjct: 241 DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG 300

Query: 301 RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD 360
           RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD
Sbjct: 301 RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD 360

Query: 361 L 362
           L
Sbjct: 361 L 361

[Close]
BLAST of Cmc04g0101391 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 717.6 bits (1851), Expect = 5.3e-203
Identity = 348/361 (96.40%), Postives = 353/361 (97.78%), Query Frame = 0 

Query: 1   MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPE 60
           MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK E
Sbjct: 493 MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 552

Query: 61  ALEKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
           ALEKFKEYKA+VENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV
Sbjct: 553 ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 612

Query: 121 SERRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSASETPLKLWNGHKGSL 180
           SERRNRTLLDMV+SM+SYAHLPNSFWGYAVQTAVYILNCVPSKS SETPLKLWNG KGSL
Sbjct: 613 SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 672

Query: 181 RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
           RHFRIWGCPAHVLENNPKKLEP SKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 673 RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 732

Query: 241 DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG 300
           DHIREHKPRSKIVLNELSK+T EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLR+PRRSG
Sbjct: 733 DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG 792

Query: 301 RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD 360
           RVTNL IRYMSLTETLTVISDGDIEDPLTF K MEDVDKDEWIKAMNLELESMYFNSVWD
Sbjct: 793 RVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 852

Query: 361 L 362
           L
Sbjct: 853 L 853

[Close]
BLAST of Cmc04g0101391 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 717.6 bits (1851), Expect = 5.3e-203
Identity = 348/361 (96.40%), Postives = 353/361 (97.78%), Query Frame = 0 

Query: 1   MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPE 60
           MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK E
Sbjct: 494 MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 553

Query: 61  ALEKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
           ALEKFKEYKA+VENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV
Sbjct: 554 ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 613

Query: 121 SERRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSASETPLKLWNGHKGSL 180
           SERRNRTLLDMV+SM+SYAHLPNSFWGYAVQTAVYILNCVPSKS SETPLKLWNG KGSL
Sbjct: 614 SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 673

Query: 181 RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
           RHFRIWGCPAHVLENNPKKLEP SKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 674 RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 733

Query: 241 DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG 300
           DHIREHKPRSKIVLNELSK+T EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLR+PRRSG
Sbjct: 734 DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG 793

Query: 301 RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD 360
           RVTNL IRYMSLTETLTVISDGDIEDPLTF K MEDVDKDEWIKAMNLELESMYFNSVWD
Sbjct: 794 RVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 853

Query: 361 L 362
           L
Sbjct: 854 L 854

[Close]
BLAST of Cmc04g0101391 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 717.6 bits (1851), Expect = 5.3e-203
Identity = 348/361 (96.40%), Postives = 353/361 (97.78%), Query Frame = 0 

Query: 1   MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPE 60
           MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK E
Sbjct: 494 MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 553

Query: 61  ALEKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
           ALEKFKEYKA+VENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV
Sbjct: 554 ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 613

Query: 121 SERRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSASETPLKLWNGHKGSL 180
           SERRNRTLLDMV+SM+SYAHLPNSFWGYAVQTAVYILNCVPSKS SETPLKLWNG KGSL
Sbjct: 614 SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 673

Query: 181 RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
           RHFRIWGCPAHVLENNPKKLEP SKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 674 RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 733

Query: 241 DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG 300
           DHIREHKPRSKIVLNELSK+T EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLR+PRRSG
Sbjct: 734 DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG 793

Query: 301 RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD 360
           RVTNL IRYMSLTETLTVISDGDIEDPLTF K MEDVDKDEWIKAMNLELESMYFNSVWD
Sbjct: 794 RVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 853

Query: 361 L 362
           L
Sbjct: 854 L 854

[Close]
BLAST of Cmc04g0101391 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 5.8e-51
Identity = 133/387 (34.37%), Postives = 197/387 (50.90%), Query Frame = 0 

Query: 6   FTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPEALEKF 65
           F     R    L+LV+SD+CGPM +++ GG +YF+TF DD SR  +VY+++ K +  + F
Sbjct: 470 FQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVF 529

Query: 66  KEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRN 125
           +++ A VE    + +K  RSD GGEY   +F+ Y    GI  + + PGTPQ NGV+ER N
Sbjct: 530 QKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMN 589

Query: 126 RTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPS-KSASETPLKLWNGHKGSLRHFR 185
           RT+++ V+SM+  A LP SFWG AVQTA Y++N  PS   A E P ++W   + S  H +
Sbjct: 590 RTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLK 649

Query: 186 IWGCP--AHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDH 245
           ++GC   AHV +    KL+  S  C+F+GY     G   +DP   KV  S +  F  E  
Sbjct: 650 VFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVF-RESE 709

Query: 246 IREHKPRSKIVLN------------------------ELSKKTIEPSTRVVEEPSAL--- 305
           +R     S+ V N                        E+S++  +P   V+E+   L   
Sbjct: 710 VRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPG-EVIEQGEQLDEG 769

Query: 306 -TRVVHVGSSTRTHQPQSLRKPRRSGRVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEM 362
              V H       HQP      RRS R      RY S TE + +  D    +P +  + +
Sbjct: 770 VEEVEHPTQGEEQHQPL-----RRSERPRVESRRYPS-TEYVLISDD---REPESLKEVL 829

[Close]
BLAST of Cmc04g0101391 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 155.6 bits (392), Expect = 1.1e-36
Identity = 83/253 (32.81%), Postives = 140/253 (55.34%), Query Frame = 0 

Query: 14  KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPEALEKFKEYKAKVE 73
           K PL +VHSD+CGP+         YF+ F D ++ Y   YL+++K +    F+++ AK E
Sbjct: 478 KRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSE 537

Query: 74  NALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVQ 133
              +  +     D G EY+  + + + ++ GI   L+ P TPQ NGVSER  RT+ +  +
Sbjct: 538 AHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKAR 597

Query: 134 SMISYAHLPNSFWGYAVQTAVYILNCVPSKS---ASETPLKLWNGHKGSLRHFRIWGCPA 193
           +M+S A L  SFWG AV TA Y++N +PS++   +S+TP ++W+  K  L+H R++G   
Sbjct: 598 TMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATV 657

Query: 194 HV-LENNPKKLEPCSKLCLFVGY-PKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKP 253
           +V ++N   K +  S   +FVGY P G +    +D  + K  V+ +    E + +     
Sbjct: 658 YVHIKNKQGKFDDKSFKSIFVGYEPNGFK---LWDAVNEKFIVARDVVVDETNMVNSRAV 717

Query: 254 RSKIVLNELSKKT 262
           + + V  + SK++
Sbjct: 718 KFETVFLKDSKES 727

[Close]
BLAST of Cmc04g0101391 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 9.6e-30
Identity = 68/213 (31.92%), Postives = 122/213 (57.28%), Query Frame = 0 

Query: 3   KRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPEAL 62
           K PF+     + +PLE ++SD+     + +   + Y++ F D ++RY ++Y ++ K +  
Sbjct: 489 KVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVK 548

Query: 63  EKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSE 122
           + F  +K+ VEN     I T  SD GGE++ L+  +YL + GI    S P TP+ NG+SE
Sbjct: 549 DTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLR--DYLSQHGISHFTSPPHTPEHNGLSE 608

Query: 123 RRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSAS-ETPLKLWNGHKGSLR 182
           R++R +++M  +++S+A +P ++W YA   AVY++N +P+     ++P +   G   +  
Sbjct: 609 RKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYE 668

Query: 183 HFRIWGCPAH--VLENNPKKLEPCSKLCLFVGY 213
             +++GC  +  +   N  KLE  SK C F+GY
Sbjct: 669 KLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGY 698

[Close]
BLAST of Cmc04g0101391 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.1e-29
Identity = 70/240 (29.17%), Postives = 128/240 (53.33%), Query Frame = 0 

Query: 3   KRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPEAL 62
           K PF+     +  PLE ++SD+     + +   + Y++ F D ++RY ++Y ++ K +  
Sbjct: 510 KVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVK 569

Query: 63  EKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSE 122
           E F  +K  +EN     I TF SD GGE++ L    Y  + GI    S P TP+ NG+SE
Sbjct: 570 ETFITFKNLLENRFQTRIGTFYSDNGGEFVAL--WEYFSQHGISHLTSPPHTPEHNGLSE 629

Query: 123 RRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSAS-ETPLKLWNGHKGSLR 182
           R++R +++   +++S+A +P ++W YA   AVY++N +P+     E+P +   G   +  
Sbjct: 630 RKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYD 689

Query: 183 HFRIWGCPAH--VLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLE 240
             R++GC  +  +   N  KL+  S+ C+F+GY            + +++++S +  F E
Sbjct: 690 KLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDE 746

[Close]
BLAST of Cmc04g0101391 vs. ExPASy Swiss-Prot
Match: Q12490 (Transposon Ty1-BL Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-BL PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.0e-19
Identity = 64/243 (26.34%), Postives = 115/243 (47.33%), Query Frame = 0 

Query: 9   KGHRAK-----EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPE--A 68
           KG R K     EP + +H+D+ GP++   +    YFI+FTD+ +++ +VY +  + E   
Sbjct: 652 KGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSI 711

Query: 69  LEKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVS 128
           L+ F    A ++N    ++   + DRG EY +     +L + GI    +     + +GV+
Sbjct: 712 LDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVA 771

Query: 129 ERRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSASETPLKLWNGHKG--- 188
           ER NRTLLD  ++ +  + LPN  W  A++ +  + N + S  + ++  +    H G   
Sbjct: 772 ERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQ----HAGLAG 831

Query: 189 -SLRHFRIWGCPAHVLENNP-KKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNAT 240
             +     +G P  V ++NP  K+ P       +   + + G   Y P   K   +TN  
Sbjct: 832 LDISTLLPFGQPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYV 890

[Close]
BLAST of Cmc04g0101391 vs. ExPASy TrEMBL
Match: A0A5A7UUN7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00300 PE=4 SV=1)

HSP 1 Score: 746.5 bits (1926), Expect = 5.2e-212
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0 

Query: 1   MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPE 60
           MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPE
Sbjct: 204 MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPE 263

Query: 61  ALEKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
           ALEKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV
Sbjct: 264 ALEKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 323

Query: 121 SERRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSASETPLKLWNGHKGSL 180
           SERRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSASETPLKLWNGHKGSL
Sbjct: 324 SERRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSASETPLKLWNGHKGSL 383

Query: 181 RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
           RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 384 RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 443

Query: 241 DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG 300
           DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG
Sbjct: 444 DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG 503

Query: 301 RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD 360
           RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD
Sbjct: 504 RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD 563

Query: 361 L 362
           L
Sbjct: 564 L 564

[Close]
BLAST of Cmc04g0101391 vs. ExPASy TrEMBL
Match: A0A5D3BCE6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold535G00260 PE=4 SV=1)

HSP 1 Score: 737.6 bits (1903), Expect = 2.4e-209
Identity = 356/361 (98.61%), Postives = 359/361 (99.45%), Query Frame = 0 

Query: 1   MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPE 60
           MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK E
Sbjct: 1   MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 60

Query: 61  ALEKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
           ALEKFKEYKA+VENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV
Sbjct: 61  ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120

Query: 121 SERRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSASETPLKLWNGHKGSL 180
           SERRNRTLLDMV+SM+SYAHLPNSFWGYAVQTAVYILNCVPSKS SETPLKLWNGHKGSL
Sbjct: 121 SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGHKGSL 180

Query: 181 RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
           RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 181 RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240

Query: 241 DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG 300
           DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG
Sbjct: 241 DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG 300

Query: 301 RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD 360
           RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD
Sbjct: 301 RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD 360

Query: 361 L 362
           L
Sbjct: 361 L 361

[Close]
BLAST of Cmc04g0101391 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 717.6 bits (1851), Expect = 2.6e-203
Identity = 348/361 (96.40%), Postives = 353/361 (97.78%), Query Frame = 0 

Query: 1   MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPE 60
           MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK E
Sbjct: 494 MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 553

Query: 61  ALEKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
           ALEKFKEYKA+VENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV
Sbjct: 554 ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 613

Query: 121 SERRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSASETPLKLWNGHKGSL 180
           SERRNRTLLDMV+SM+SYAHLPNSFWGYAVQTAVYILNCVPSKS SETPLKLWNG KGSL
Sbjct: 614 SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 673

Query: 181 RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
           RHFRIWGCPAHVLENNPKKLEP SKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 674 RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 733

Query: 241 DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG 300
           DHIREHKPRSKIVLNELSK+T EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLR+PRRSG
Sbjct: 734 DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG 793

Query: 301 RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD 360
           RVTNL IRYMSLTETLTVISDGDIEDPLTF K MEDVDKDEWIKAMNLELESMYFNSVWD
Sbjct: 794 RVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 853

Query: 361 L 362
           L
Sbjct: 854 L 854

[Close]
BLAST of Cmc04g0101391 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 717.6 bits (1851), Expect = 2.6e-203
Identity = 348/361 (96.40%), Postives = 353/361 (97.78%), Query Frame = 0 

Query: 1   MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPE 60
           MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK E
Sbjct: 494 MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 553

Query: 61  ALEKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
           ALEKFKEYKA+VENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV
Sbjct: 554 ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 613

Query: 121 SERRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSASETPLKLWNGHKGSL 180
           SERRNRTLLDMV+SM+SYAHLPNSFWGYAVQTAVYILNCVPSKS SETPLKLWNG KGSL
Sbjct: 614 SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 673

Query: 181 RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
           RHFRIWGCPAHVLENNPKKLEP SKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 674 RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 733

Query: 241 DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG 300
           DHIREHKPRSKIVLNELSK+T EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLR+PRRSG
Sbjct: 734 DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG 793

Query: 301 RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD 360
           RVTNL IRYMSLTETLTVISDGDIEDPLTF K MEDVDKDEWIKAMNLELESMYFNSVWD
Sbjct: 794 RVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 853

Query: 361 L 362
           L
Sbjct: 854 L 854

[Close]
BLAST of Cmc04g0101391 vs. ExPASy TrEMBL
Match: A0A5A7V4M1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00930 PE=4 SV=1)

HSP 1 Score: 717.6 bits (1851), Expect = 2.6e-203
Identity = 348/361 (96.40%), Postives = 353/361 (97.78%), Query Frame = 0 

Query: 1   MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKPE 60
           MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK E
Sbjct: 611 MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 670

Query: 61  ALEKFKEYKAKVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
           ALEKFKEYKA+VENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV
Sbjct: 671 ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 730

Query: 121 SERRNRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSASETPLKLWNGHKGSL 180
           SERRNRTLLDMV+SM+SYAHLPNSFWGYAVQTAVYILNCVPSKS SETPLKLWNG KGSL
Sbjct: 731 SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 790

Query: 181 RHFRIWGCPAHVLENNPKKLEPCSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
           RHFRIWGCPAHVLENNPKKLEP SKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 791 RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 850

Query: 241 DHIREHKPRSKIVLNELSKKTIEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLRKPRRSG 300
           DHIREHKPRSKIVLNELSK+T EPSTRVVEEPSALTRVVHVGSSTRTHQPQSLR+PRRSG
Sbjct: 851 DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG 910

Query: 301 RVTNLLIRYMSLTETLTVISDGDIEDPLTFMKEMEDVDKDEWIKAMNLELESMYFNSVWD 360
           RVTNL IRYMSLTETLTVISDGDIEDPLTF K MEDVDKDEWIKAMNLELESMYFNSVWD
Sbjct: 911 RVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 970

Query: 361 L 362
           L
Sbjct: 971 L 971

[Close]
BLAST of Cmc04g0101391 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 48.5 bits (114), Expect = 1.3e-05
Identity = 27/82 (32.93%), Postives = 47/82 (57.32%), Query Frame = 0 

Query: 125 NRTLLDMVQSMISYAHLPNSFWGYAVQTAVYILNCVPSKSAS-ETPLKLWNGHKGSLRHF 184
           NRT+++ V+SM+    LP +F   A  TAV+I+N  PS + +   P ++W     +  + 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 185 RIWGCPAHVLENNPKKLEPCSK 206
           R +GC A++   +  KL+P +K
Sbjct: 62  RRFGCVAYI-HCDEGKLKPRAK 82

The following BLAST results are available for this feature:
BLAST of Cmc04g0101391 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0058447.11.1e-211100.00gag/pol protein [Cucumis melo var. makuwa][more]
TYJ96709.15.0e-20998.61gag/pol protein [Cucumis melo var. makuwa][more]
KAA0048404.15.3e-20396.40gag/pol protein [Cucumis melo var. makuwa][more]
TYK14550.15.3e-20396.40gag/pol protein [Cucumis melo var. makuwa][more]
KAA0054490.15.3e-20396.40gag/pol protein [Cucumis melo var. makuwa][more]
BLAST of Cmc04g0101391 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P109785.8e-5134.37Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041461.1e-3632.81Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT949.6e-3031.92Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW22.1e-2929.17Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q124902.0e-1926.34Transposon Ty1-BL Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 2... [more]
BLAST of Cmc04g0101391 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UUN75.2e-212100.00Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G0030... [more]
A0A5D3BCE62.4e-20998.61Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold535G0026... [more]
A0A5A7SMH82.6e-20396.40Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025... [more]
A0A5D3CPJ62.6e-20396.40Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004... [more]
A0A5A7V4M12.6e-20396.40Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0093... [more]
BLAST of Cmc04g0101391 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00710.11.3e-0532.93Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 9..185
e-value: 4.0E-38
score: 132.7
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 14..115
e-value: 5.5E-11
score: 42.7
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 12..177
score: 23.010916
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 1..358
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 11..171

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0101391.1Cmc04g0101391.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding