Cmc04g0100611 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0100611
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCytochrome c biogenesis FC
LocationCMiso1.1chr04: 16617894 .. 16618781 (+)
RNA-Seq ExpressionCmc04g0100611
SyntenyCmc04g0100611
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTGTGAATATTTTCATTTTGAGCCTCTCACCTTCTCTAGAGAAGCGAAACTTGAACAGATAGATCAGATGGTCCAACAGAATAACTTTTTCTTTTTCATTACTTTCATGGTCGTGCCTTGTGGCATGACAGCACCCATTTTATTTCAATGGTTTGTCAGTAGAGATGTTTCCACAGGTGCCCTTTTTTCCAATGGTACTATAATTCCTATTCCTATCTCTTTATTCCTTCTTTTGGTTTATCTACATTCCAGGAAATTCATACACTTCATGGATGGAGCAAAAGGTGGAGTCTTGGTTAGAGCAAGCTGCCCTATTCTATTACCAGATATAATTGGGAGAATCTTATTCGAAACTCAAGCTAGAAAGGCCTCATTTTGTTTCATTCGCCTTATTCATTTCCTTCTTCTTTCATTTAAAGGGGAGGTTTTTTATTTCTCATCTTTCTGTGGTGTGTTCTGTTTACTATTCTTTCGTACTCTCTTCTTTTTACCACCCCATAGCTCAGTGAAGTGTGAGTGGGCACAGAGAAGGAAAGGCCAAAGACTTCGACCTTTGTTCATTGAGGTGGGGAATGAACATGGACTCAATTCCAAGATGAGGTGCTCTGGGTACCCCCATTTAGAAAGAAGGGTCTCAGATTTTGGGCCTGTAGCTTTCCTTGTCTGCCCTTCTTTGAGTGGTGCTTGTGTGTGGGGTGTGCTTCCAAAAACCGAGCTTGAAGCTCTTGCCTTACCAATGAGCCGAAAACTAATGGCTCTTGGTCACGACTACTACCAAAAAGCTCCAAGGAAGATTCATATTTCACATGGAGGAGTGTGCATCTTTATCTTGGGTGTTCTTCTGTCATTACTCTCTTTCCTCTTATTCCATCTATTTGTTTAG

mRNA sequence

ATGCCTTGTGAATATTTTCATTTTGAGCCTCTCACCTTCTCTAGAGAAGCGAAACTTGAACAGATAGATCAGATGGTCCAACAGAATAACTTTTTCTTTTTCATTACTTTCATGGTCGTGCCTTGTGGCATGACAGCACCCATTTTATTTCAATGGTTTGTCAGTAGAGATGTTTCCACAGGTGCCCTTTTTTCCAATGGTACTATAATTCCTATTCCTATCTCTTTATTCCTTCTTTTGGTTTATCTACATTCCAGGAAATTCATACACTTCATGGATGGAGCAAAAGGTGGAGTCTTGGTTAGAGCAAGCTGCCCTATTCTATTACCAGATATAATTGGGAGAATCTTATTCGAAACTCAAGCTAGAAAGGCCTCATTTTGTTTCATTCGCCTTATTCATTTCCTTCTTCTTTCATTTAAAGGGGAGGTTTTTTATTTCTCATCTTTCTGTGGTGTGTTCTGTTTACTATTCTTTCGTACTCTCTTCTTTTTACCACCCCATAGCTCAGTGAAGTGTGAGTGGGCACAGAGAAGGAAAGGCCAAAGACTTCGACCTTTGTTCATTGAGGTGGGGAATGAACATGGACTCAATTCCAAGATGAGGTGCTCTGGGTACCCCCATTTAGAAAGAAGGGTCTCAGATTTTGGGCCTGTAGCTTTCCTTGTCTGCCCTTCTTTGAGTGGTGCTTGTGTGTGGGGTGTGCTTCCAAAAACCGAGCTTGAAGCTCTTGCCTTACCAATGAGCCGAAAACTAATGGCTCTTGGTCACGACTACTACCAAAAAGCTCCAAGGAAGATTCATATTTCACATGGAGGAGTGTGCATCTTTATCTTGGGTGTTCTTCTGTCATTACTCTCTTTCCTCTTATTCCATCTATTTGTTTAG

Coding sequence (CDS)

ATGCCTTGTGAATATTTTCATTTTGAGCCTCTCACCTTCTCTAGAGAAGCGAAACTTGAACAGATAGATCAGATGGTCCAACAGAATAACTTTTTCTTTTTCATTACTTTCATGGTCGTGCCTTGTGGCATGACAGCACCCATTTTATTTCAATGGTTTGTCAGTAGAGATGTTTCCACAGGTGCCCTTTTTTCCAATGGTACTATAATTCCTATTCCTATCTCTTTATTCCTTCTTTTGGTTTATCTACATTCCAGGAAATTCATACACTTCATGGATGGAGCAAAAGGTGGAGTCTTGGTTAGAGCAAGCTGCCCTATTCTATTACCAGATATAATTGGGAGAATCTTATTCGAAACTCAAGCTAGAAAGGCCTCATTTTGTTTCATTCGCCTTATTCATTTCCTTCTTCTTTCATTTAAAGGGGAGGTTTTTTATTTCTCATCTTTCTGTGGTGTGTTCTGTTTACTATTCTTTCGTACTCTCTTCTTTTTACCACCCCATAGCTCAGTGAAGTGTGAGTGGGCACAGAGAAGGAAAGGCCAAAGACTTCGACCTTTGTTCATTGAGGTGGGGAATGAACATGGACTCAATTCCAAGATGAGGTGCTCTGGGTACCCCCATTTAGAAAGAAGGGTCTCAGATTTTGGGCCTGTAGCTTTCCTTGTCTGCCCTTCTTTGAGTGGTGCTTGTGTGTGGGGTGTGCTTCCAAAAACCGAGCTTGAAGCTCTTGCCTTACCAATGAGCCGAAAACTAATGGCTCTTGGTCACGACTACTACCAAAAAGCTCCAAGGAAGATTCATATTTCACATGGAGGAGTGTGCATCTTTATCTTGGGTGTTCTTCTGTCATTACTCTCTTTCCTCTTATTCCATCTATTTGTTTAG

Protein sequence

MPCEYFHFEPLTFSREAKLEQIDQMVQQNNFFFFITFMVVPCGMTAPILFQWFVSRDVSTGALFSNGTIIPIPISLFLLLVYLHSRKFIHFMDGAKGGVLVRASCPILLPDIIGRILFETQARKASFCFIRLIHFLLLSFKGEVFYFSSFCGVFCLLFFRTLFFLPPHSSVKCEWAQRRKGQRLRPLFIEVGNEHGLNSKMRCSGYPHLERRVSDFGPVAFLVCPSLSGACVWGVLPKTELEALALPMSRKLMALGHDYYQKAPRKIHISHGGVCIFILGVLLSLLSFLLFHLFV
Homology
[Close]
BLAST of Cmc04g0100611 vs. NCBI nr
Match: KAA0051165.1 (cytochrome c biogenesis FC [Cucumis melo var. makuwa])

HSP 1 Score: 559.3 bits (1440), Expect = 2.0e-155
Identity = 279/295 (94.58%), Postives = 282/295 (95.59%), Query Frame = 0 

Query: 1   MPCEYFHFEPLTFSREAKLEQIDQMVQQNNFFFFITFMVVPCGMTAPILFQWFVSRDVST 60
           MPCEYFHFEPLTFSREAKLE+IDQMVQ NNFFFFITFMVVPCGMTAPILFQWFVSRDV T
Sbjct: 1   MPCEYFHFEPLTFSREAKLERIDQMVQLNNFFFFITFMVVPCGMTAPILFQWFVSRDVPT 60

Query: 61  GALFSNGTIIPIPISLFLLLVYLHSRKFIHFMDGAKGGVLVRASCPILLPDIIGRILFET 120
           GAL SNGTIIPIPISLFLLLVYLHSRKFI FMD AKGGVLVRASCPILLPDIIGRILFET
Sbjct: 61  GALSSNGTIIPIPISLFLLLVYLHSRKFIRFMDEAKGGVLVRASCPILLPDIIGRILFET 120

Query: 121 QARKASFCFIRLIHFLLLSFKGEVFYFSSFCGVFCLLFFRTLFFLPPHSSVKCEWAQRRK 180
           QARKASFCFIRLIHFLLLS KGEVFYFSSF GVFCLLFF TLFFLP HSSVKCEWAQRRK
Sbjct: 121 QARKASFCFIRLIHFLLLSSKGEVFYFSSFSGVFCLLFFHTLFFLPRHSSVKCEWAQRRK 180

Query: 181 GQRLRPLFIEVGNEHGLNSKMRCSGYPHLERRVSDFGPVAFLVCPSLSGACVWGVLPKTE 240
           GQRLRPLFI+VGNEHGLNSKMRCS YPHLERRVSDFGPVAFLVCPSL GACVWGVLPK E
Sbjct: 181 GQRLRPLFIKVGNEHGLNSKMRCSEYPHLERRVSDFGPVAFLVCPSLGGACVWGVLPKIE 240

Query: 241 LEALALPMSRKLMALGHDYYQKAPRKIHISHGGVCIFILGVLLSLLSFLLFHLFV 296
           LEALAL MSR+LMALGHDYYQKAPRKIHISHGGVCIFILGVLLSLLSFLLFHLFV
Sbjct: 241 LEALALLMSRQLMALGHDYYQKAPRKIHISHGGVCIFILGVLLSLLSFLLFHLFV 295

[Close]
BLAST of Cmc04g0100611 vs. NCBI nr
Match: KAA0034869.1 (cytochrome c biogenesis FC [Cucumis melo var. makuwa] >TYJ96716.1 cytochrome c biogenesis FC [Cucumis melo var. makuwa])

HSP 1 Score: 449.5 bits (1155), Expect = 2.2e-122
Identity = 232/284 (81.69%), Postives = 244/284 (85.92%), Query Frame = 0 

Query: 1   MPCEYFHFEPLTFSREAKLEQIDQMVQQNNFFFFITFMVVPCGMTAPILFQWFVSRDVST 60
           MPCE+ +FEPLTFSREAKLE+I+QMVQ NNFFFFIT MVVP G  AP+LFQWFVSRDV T
Sbjct: 1   MPCEHLNFEPLTFSREAKLERIEQMVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRDVPT 60

Query: 61  GALFSNGTIIPIPISLFLLLVYLHSRKFIHFMDGAKGGVLVRASCPILLPDIIGRILFET 120
           GA  SNGTIIPIPISLF LLVYLHSRKFI  MDGAK GVLVRAS PILLPDIIGR   ET
Sbjct: 61  GAPSSNGTIIPIPISLFPLLVYLHSRKFIRSMDGAKSGVLVRASRPILLPDIIGRSSSET 120

Query: 121 QARKASFCFIRLIHFLLLSFKGEVFYFSSFCGVFCLLFFRTLFFLPPHSSVKCEWAQRRK 180
           +ARKASF F+ LIHFLLLS KG+  YFSSFCGV CLLFFRTLF LP HSS K E A+RRK
Sbjct: 121 RARKASFRFLPLIHFLLLSSKGDFSYFSSFCGVLCLLFFRTLFSLPRHSSAKRERARRRK 180

Query: 181 GQRLRPLFIEVGNEHGLNSKMRCSGYPHLERRVSDFGPVAFLVCPSLSGACVWGVLPKTE 240
           GQRLRPLFIE GNE GLNSKMRCSG+PHLERRVS FGPVAF V PS  GACV GVLP+  
Sbjct: 181 GQRLRPLFIEAGNEQGLNSKMRCSGHPHLERRVSGFGPVAFPVRPSSGGACVGGVLPEIG 240

Query: 241 LEALALPMSRKLMALGHDYYQKAPRKIHISHGGVCIFILGVLLS 285
           LEALALP SR+LMALGHDYYQKAP KIHISHGGVCIFILGVLLS
Sbjct: 241 LEALALPTSRQLMALGHDYYQKAPMKIHISHGGVCIFILGVLLS 284

[Close]
BLAST of Cmc04g0100611 vs. NCBI nr
Match: TYK03736.1 (cytochrome c biogenesis FC [Cucumis melo var. makuwa])

HSP 1 Score: 412.5 bits (1059), Expect = 3.0e-111
Identity = 203/213 (95.31%), Postives = 204/213 (95.77%), Query Frame = 0 

Query: 38  MVVPCGMTAPILFQWFVSRDVSTGALFSNGTIIPIPISLFLLLVYLHSRKFIHFMDGAKG 97
           MVVPCGMTAPILFQWFVSRDV TGAL SNGTIIPIPISLFLLLVYLHSRKFI FMDGAKG
Sbjct: 1   MVVPCGMTAPILFQWFVSRDVPTGALSSNGTIIPIPISLFLLLVYLHSRKFIRFMDGAKG 60

Query: 98  GVLVRASCPILLPDIIGRILFETQARKASFCFIRLIHFLLLSFKGEVFYFSSFCGVFCLL 157
           GVLVRASCPILLPDIIGRILFETQARKASFCFIRLIHFLLLS KGEVFYFSSF GVFCLL
Sbjct: 61  GVLVRASCPILLPDIIGRILFETQARKASFCFIRLIHFLLLSSKGEVFYFSSFSGVFCLL 120

Query: 158 FFRTLFFLPPHSSVKCEWAQRRKGQRLRPLFIEVGNEHGLNSKMRCSGYPHLERRVSDFG 217
           FFRTLFFLP HS VKCEWAQRRKGQRLRPLFI+VGNEHGLNSKMRCSGYPHLERRVSDFG
Sbjct: 121 FFRTLFFLPRHSLVKCEWAQRRKGQRLRPLFIKVGNEHGLNSKMRCSGYPHLERRVSDFG 180

Query: 218 PVAFLVCPSLSGACVWGVLPKTELEALALPMSR 251
           PVAFLVCPSL GACVWGVLPK ELEALALPMSR
Sbjct: 181 PVAFLVCPSLGGACVWGVLPKIELEALALPMSR 213

[Close]
BLAST of Cmc04g0100611 vs. NCBI nr
Match: AEN56115.1 (cytochrome c biogenesis FC [Cucumis melo subsp. melo])

HSP 1 Score: 407.9 bits (1047), Expect = 7.4e-110
Identity = 213/260 (81.92%), Postives = 221/260 (85.00%), Query Frame = 0 

Query: 25  MVQQNNFFFFITFMVVPCGMTAPILFQWFVSRDVSTGALFSNGTIIPIPISLFLLLVYLH 84
           MVQ NNFFFFIT MVVP G  AP+LFQWFVSRDV TGA  SNGTIIPIPISLF LLVYLH
Sbjct: 1   MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRDVPTGAPSSNGTIIPIPISLFPLLVYLH 60

Query: 85  SRKFIHFMDGAKGGVLVRASCPILLPDIIGRILFETQARKASFCFIRLIHFLLLSFKGEV 144
           SRKFI  MDGAK GVLVRAS PILLPDIIGR   ET+ARKASF F+ LIHFLLLS KG+ 
Sbjct: 61  SRKFIRSMDGAKSGVLVRASRPILLPDIIGRSSSETRARKASFRFLPLIHFLLLSSKGDF 120

Query: 145 FYFSSFCGVFCLLFFRTLFFLPPHSSVKCEWAQRRKGQRLRPLFIEVGNEHGLNSKMRCS 204
            YFSSFCGV CLLFFRTLF LP HSS K E A+RRKGQRLRPLFIE GNE GLNSKMRCS
Sbjct: 121 SYFSSFCGVLCLLFFRTLFSLPRHSSAKRERARRRKGQRLRPLFIEAGNEQGLNSKMRCS 180

Query: 205 GYPHLERRVSDFGPVAFLVCPSLSGACVWGVLPKTELEALALPMSRKLMALGHDYYQKAP 264
           G+PHLERRVS FGPVAF V PS  GACV GVLP+  LEALALP SR+LMALGHDYYQKAP
Sbjct: 181 GHPHLERRVSGFGPVAFPVRPSSGGACVGGVLPEIGLEALALPTSRQLMALGHDYYQKAP 240

Query: 265 RKIHISHGGVCIFILGVLLS 285
            KIHISHGGVCIFILGVLLS
Sbjct: 241 MKIHISHGGVCIFILGVLLS 260

[Close]
BLAST of Cmc04g0100611 vs. NCBI nr
Match: AZP40277.1 (cytochrome c biogenesis FC [Cucumis melo var. momordica])

HSP 1 Score: 407.9 bits (1047), Expect = 7.4e-110
Identity = 213/260 (81.92%), Postives = 221/260 (85.00%), Query Frame = 0 

Query: 25  MVQQNNFFFFITFMVVPCGMTAPILFQWFVSRDVSTGALFSNGTIIPIPISLFLLLVYLH 84
           MVQ NNFFFFIT MVVP G  AP+LFQWFVSRDV TGA  SNGTIIPIPISLF LLVYLH
Sbjct: 1   MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRDVPTGAPSSNGTIIPIPISLFPLLVYLH 60

Query: 85  SRKFIHFMDGAKGGVLVRASCPILLPDIIGRILFETQARKASFCFIRLIHFLLLSFKGEV 144
           SRKFI  MDGAK GVLVRAS PILLPDIIGR   ET+ARKASF F+ LIHFLLLS KG+ 
Sbjct: 61  SRKFIRSMDGAKSGVLVRASRPILLPDIIGRSSSETRARKASFRFLPLIHFLLLSSKGDF 120

Query: 145 FYFSSFCGVFCLLFFRTLFFLPPHSSVKCEWAQRRKGQRLRPLFIEVGNEHGLNSKMRCS 204
            YFSSFCGV CLLFFRTLF LP HSS K E A+RRKGQRLRPLFIE GNE GLNSKMRCS
Sbjct: 121 SYFSSFCGVLCLLFFRTLFSLPRHSSAKRERARRRKGQRLRPLFIEAGNEQGLNSKMRCS 180

Query: 205 GYPHLERRVSDFGPVAFLVCPSLSGACVWGVLPKTELEALALPMSRKLMALGHDYYQKAP 264
           G+PHLERRVS FGPVAF V PS  GACV GVLP+  LEALALP SR+LMALGHDYYQKAP
Sbjct: 181 GHPHLERRVSGFGPVAFPVRPSSGGACVGGVLPEIGLEALALPTSRQLMALGHDYYQKAP 240

Query: 265 RKIHISHGGVCIFILGVLLS 285
            KIHISHGGVCIFILGVLLS
Sbjct: 241 MKIHISHGGVCIFILGVLLS 260

[Close]
BLAST of Cmc04g0100611 vs. ExPASy Swiss-Prot
Match: P93286 (Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein OS=Arabidopsis thaliana OX=3702 GN=CCMFC PE=1 SV=2)

HSP 1 Score: 330.5 bits (846), Expect = 2.0e-89
Identity = 181/264 (68.56%), Postives = 198/264 (75.00%), Query Frame = 0 

Query: 25  MVQQNNFFFFITFMVVPCGMTAPILFQWFVSRDVSTGALFSNGTIIPIPISLFLLLVYLH 84
           MVQ +NFFFFI FMVV CG  AP+L +WFVSRDVSTGA F NGTIIPI ISLF LLVYLH
Sbjct: 1   MVQLHNFFFFIIFMVVLCGTAAPVLLKWFVSRDVSTGAPFFNGTIIPILISLFSLLVYLH 60

Query: 85  SRKFIHFMDGAKGGVLVRASCPILLPDIIGRILFETQARKASFCFIRLIHFLLLSFKGEV 144
           SRK I  MDGAK GVLVRAS PILLPDIIGR   ET+ARKA F F+ ++HF LL  KG+ 
Sbjct: 61  SRKIIRSMDGAKSGVLVRASRPILLPDIIGRSSSETRARKALFFFVPVLHFCLLESKGDF 120

Query: 145 FYFSSFCGVFCLLFFRTLFFLPPHSSVKCEWAQRRKGQRLRPLFIEVGNEHGLNSKMRCS 204
            Y  SFCGV CLLFF T FFL    S K E A+RRKGQ LRP     GNE   N KMRCS
Sbjct: 121 SYLESFCGVLCLLFFCTFFFLARDRSAKRERARRRKGQTLRP----NGNEQRRNDKMRCS 180

Query: 205 GYPH--LERRVSDFGPVAFLVCPSLSGACVWGVLPKTELEALALPMSRKLMAL--GHDYY 264
           G+PH  LERRV  FGP+AF V P L GACV GV P+  LEALALP SR+LMA+  GHDYY
Sbjct: 181 GHPHLDLERRVEGFGPLAFPVPPELGGACVGGVPPEIGLEALALPRSRQLMAMAVGHDYY 240

Query: 265 QKAPRKIHISHGGVCIFILGVLLS 285
           QK P K++ISHGGVCI +LGVLLS
Sbjct: 241 QKVPMKMNISHGGVCICMLGVLLS 260

[Close]
BLAST of Cmc04g0100611 vs. ExPASy Swiss-Prot
Match: P38452 (Uncharacterized mitochondrial protein ymf3 OS=Marchantia polymorpha OX=3197 GN=YMF3 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.4e-23
Identity = 73/141 (51.77%), Postives = 87/141 (61.70%), Query Frame = 0 

Query: 25  MVQQNNFFFFITFMVVPCGMTAPILFQWFVSRDVSTGALFSNGTIIPIPISLFLLLVYLH 84
           MVQ  NFFFF+ F+VV CG  APILFQW VSRDVSTGA F NGTIIPI  SL L+LVY+H
Sbjct: 1   MVQLQNFFFFLIFLVVLCGTAAPILFQWLVSRDVSTGAPFFNGTIIPIFTSLLLVLVYIH 60

Query: 85  SRKFIHFMDGAKGGVLVRASCPILLPDIIGRILFETQARKASFCFIRLIHFLLLSFK-GE 144
           SR F+  +D AK  VL+RA  PILLP+II +    +  +K  +    L    L  F    
Sbjct: 61  SRGFMRSLDEAKRIVLIRAR-PILLPNIIEK----SSPKKIQYISFFLDEKALSIFSFFR 120

Query: 145 VFYFSSFCGVFCLLFFRTLFF 165
            F+FS F   F  L F   +F
Sbjct: 121 QFFFSFFVRQFPALCFVGQYF 136

[Close]
BLAST of Cmc04g0100611 vs. ExPASy Swiss-Prot
Match: P38451 (Uncharacterized mitochondrial protein ymf2 OS=Marchantia polymorpha OX=3197 GN=YMF2 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.0e-06
Identity = 53/150 (35.33%), Postives = 65/150 (43.33%), Query Frame = 0 

Query: 142 GEVFYFSSFCGVFCLLFFRTLFFLPPHSSVKCEWAQRRK-------GQRLRPLFIEVGNE 201
           G+  Y  SFCGV C  FF T FFL  H   + +   R K        QR R L I     
Sbjct: 2   GDFSYLESFCGVLCFFFFCT-FFLSFHH--RRDSLARHKFSFFVFHKQRRRELIISSLRR 61

Query: 202 HGLNSKMRCSGYPHLERRVSDFGPVAFLVCPSLSGACVWGVLPKTELEALALPMSRKLMA 261
           + LN   RC                 FLV                     ALP   +L+ 
Sbjct: 62  NNLNWS-RC-----------------FLV--------------------RALP--SRLIT 107

Query: 262 LGHDYYQKAPRKIHISHGGVCIFILGVLLS 285
           +GHD ++KAP  + ISHGGVCIFI+GV+LS
Sbjct: 122 VGHD-FRKAPVNMKISHGGVCIFIMGVILS 107

[Close]
BLAST of Cmc04g0100611 vs. ExPASy TrEMBL
Match: A0A5A7UBZ9 (Cytochrome c biogenesis FC (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold511G001190 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 9.6e-156
Identity = 279/295 (94.58%), Postives = 282/295 (95.59%), Query Frame = 0 

Query: 1   MPCEYFHFEPLTFSREAKLEQIDQMVQQNNFFFFITFMVVPCGMTAPILFQWFVSRDVST 60
           MPCEYFHFEPLTFSREAKLE+IDQMVQ NNFFFFITFMVVPCGMTAPILFQWFVSRDV T
Sbjct: 1   MPCEYFHFEPLTFSREAKLERIDQMVQLNNFFFFITFMVVPCGMTAPILFQWFVSRDVPT 60

Query: 61  GALFSNGTIIPIPISLFLLLVYLHSRKFIHFMDGAKGGVLVRASCPILLPDIIGRILFET 120
           GAL SNGTIIPIPISLFLLLVYLHSRKFI FMD AKGGVLVRASCPILLPDIIGRILFET
Sbjct: 61  GALSSNGTIIPIPISLFLLLVYLHSRKFIRFMDEAKGGVLVRASCPILLPDIIGRILFET 120

Query: 121 QARKASFCFIRLIHFLLLSFKGEVFYFSSFCGVFCLLFFRTLFFLPPHSSVKCEWAQRRK 180
           QARKASFCFIRLIHFLLLS KGEVFYFSSF GVFCLLFF TLFFLP HSSVKCEWAQRRK
Sbjct: 121 QARKASFCFIRLIHFLLLSSKGEVFYFSSFSGVFCLLFFHTLFFLPRHSSVKCEWAQRRK 180

Query: 181 GQRLRPLFIEVGNEHGLNSKMRCSGYPHLERRVSDFGPVAFLVCPSLSGACVWGVLPKTE 240
           GQRLRPLFI+VGNEHGLNSKMRCS YPHLERRVSDFGPVAFLVCPSL GACVWGVLPK E
Sbjct: 181 GQRLRPLFIKVGNEHGLNSKMRCSEYPHLERRVSDFGPVAFLVCPSLGGACVWGVLPKIE 240

Query: 241 LEALALPMSRKLMALGHDYYQKAPRKIHISHGGVCIFILGVLLSLLSFLLFHLFV 296
           LEALAL MSR+LMALGHDYYQKAPRKIHISHGGVCIFILGVLLSLLSFLLFHLFV
Sbjct: 241 LEALALLMSRQLMALGHDYYQKAPRKIHISHGGVCIFILGVLLSLLSFLLFHLFV 295

[Close]
BLAST of Cmc04g0100611 vs. ExPASy TrEMBL
Match: A0A5A7T0J2 (Cytochrome c biogenesis FC (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84172G00040 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 1.1e-122
Identity = 232/284 (81.69%), Postives = 244/284 (85.92%), Query Frame = 0 

Query: 1   MPCEYFHFEPLTFSREAKLEQIDQMVQQNNFFFFITFMVVPCGMTAPILFQWFVSRDVST 60
           MPCE+ +FEPLTFSREAKLE+I+QMVQ NNFFFFIT MVVP G  AP+LFQWFVSRDV T
Sbjct: 1   MPCEHLNFEPLTFSREAKLERIEQMVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRDVPT 60

Query: 61  GALFSNGTIIPIPISLFLLLVYLHSRKFIHFMDGAKGGVLVRASCPILLPDIIGRILFET 120
           GA  SNGTIIPIPISLF LLVYLHSRKFI  MDGAK GVLVRAS PILLPDIIGR   ET
Sbjct: 61  GAPSSNGTIIPIPISLFPLLVYLHSRKFIRSMDGAKSGVLVRASRPILLPDIIGRSSSET 120

Query: 121 QARKASFCFIRLIHFLLLSFKGEVFYFSSFCGVFCLLFFRTLFFLPPHSSVKCEWAQRRK 180
           +ARKASF F+ LIHFLLLS KG+  YFSSFCGV CLLFFRTLF LP HSS K E A+RRK
Sbjct: 121 RARKASFRFLPLIHFLLLSSKGDFSYFSSFCGVLCLLFFRTLFSLPRHSSAKRERARRRK 180

Query: 181 GQRLRPLFIEVGNEHGLNSKMRCSGYPHLERRVSDFGPVAFLVCPSLSGACVWGVLPKTE 240
           GQRLRPLFIE GNE GLNSKMRCSG+PHLERRVS FGPVAF V PS  GACV GVLP+  
Sbjct: 181 GQRLRPLFIEAGNEQGLNSKMRCSGHPHLERRVSGFGPVAFPVRPSSGGACVGGVLPEIG 240

Query: 241 LEALALPMSRKLMALGHDYYQKAPRKIHISHGGVCIFILGVLLS 285
           LEALALP SR+LMALGHDYYQKAP KIHISHGGVCIFILGVLLS
Sbjct: 241 LEALALPTSRQLMALGHDYYQKAPMKIHISHGGVCIFILGVLLS 284

[Close]
BLAST of Cmc04g0100611 vs. ExPASy TrEMBL
Match: A0A5D3BZV9 (Cytochrome c biogenesis FC (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001140 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.4e-111
Identity = 203/213 (95.31%), Postives = 204/213 (95.77%), Query Frame = 0 

Query: 38  MVVPCGMTAPILFQWFVSRDVSTGALFSNGTIIPIPISLFLLLVYLHSRKFIHFMDGAKG 97
           MVVPCGMTAPILFQWFVSRDV TGAL SNGTIIPIPISLFLLLVYLHSRKFI FMDGAKG
Sbjct: 1   MVVPCGMTAPILFQWFVSRDVPTGALSSNGTIIPIPISLFLLLVYLHSRKFIRFMDGAKG 60

Query: 98  GVLVRASCPILLPDIIGRILFETQARKASFCFIRLIHFLLLSFKGEVFYFSSFCGVFCLL 157
           GVLVRASCPILLPDIIGRILFETQARKASFCFIRLIHFLLLS KGEVFYFSSF GVFCLL
Sbjct: 61  GVLVRASCPILLPDIIGRILFETQARKASFCFIRLIHFLLLSSKGEVFYFSSFSGVFCLL 120

Query: 158 FFRTLFFLPPHSSVKCEWAQRRKGQRLRPLFIEVGNEHGLNSKMRCSGYPHLERRVSDFG 217
           FFRTLFFLP HS VKCEWAQRRKGQRLRPLFI+VGNEHGLNSKMRCSGYPHLERRVSDFG
Sbjct: 121 FFRTLFFLPRHSLVKCEWAQRRKGQRLRPLFIKVGNEHGLNSKMRCSGYPHLERRVSDFG 180

Query: 218 PVAFLVCPSLSGACVWGVLPKTELEALALPMSR 251
           PVAFLVCPSL GACVWGVLPK ELEALALPMSR
Sbjct: 181 PVAFLVCPSLGGACVWGVLPKIELEALALPMSR 213

[Close]
BLAST of Cmc04g0100611 vs. ExPASy TrEMBL
Match: G3EU31 (Cytochrome c biogenesis FC OS=Cucumis melo subsp. melo OX=412675 GN=ccmFc PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 3.6e-110
Identity = 213/260 (81.92%), Postives = 221/260 (85.00%), Query Frame = 0 

Query: 25  MVQQNNFFFFITFMVVPCGMTAPILFQWFVSRDVSTGALFSNGTIIPIPISLFLLLVYLH 84
           MVQ NNFFFFIT MVVP G  AP+LFQWFVSRDV TGA  SNGTIIPIPISLF LLVYLH
Sbjct: 1   MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRDVPTGAPSSNGTIIPIPISLFPLLVYLH 60

Query: 85  SRKFIHFMDGAKGGVLVRASCPILLPDIIGRILFETQARKASFCFIRLIHFLLLSFKGEV 144
           SRKFI  MDGAK GVLVRAS PILLPDIIGR   ET+ARKASF F+ LIHFLLLS KG+ 
Sbjct: 61  SRKFIRSMDGAKSGVLVRASRPILLPDIIGRSSSETRARKASFRFLPLIHFLLLSSKGDF 120

Query: 145 FYFSSFCGVFCLLFFRTLFFLPPHSSVKCEWAQRRKGQRLRPLFIEVGNEHGLNSKMRCS 204
            YFSSFCGV CLLFFRTLF LP HSS K E A+RRKGQRLRPLFIE GNE GLNSKMRCS
Sbjct: 121 SYFSSFCGVLCLLFFRTLFSLPRHSSAKRERARRRKGQRLRPLFIEAGNEQGLNSKMRCS 180

Query: 205 GYPHLERRVSDFGPVAFLVCPSLSGACVWGVLPKTELEALALPMSRKLMALGHDYYQKAP 264
           G+PHLERRVS FGPVAF V PS  GACV GVLP+  LEALALP SR+LMALGHDYYQKAP
Sbjct: 181 GHPHLERRVSGFGPVAFPVRPSSGGACVGGVLPEIGLEALALPTSRQLMALGHDYYQKAP 240

Query: 265 RKIHISHGGVCIFILGVLLS 285
            KIHISHGGVCIFILGVLLS
Sbjct: 241 MKIHISHGGVCIFILGVLLS 260

[Close]
BLAST of Cmc04g0100611 vs. ExPASy TrEMBL
Match: A0A3S5HPI5 (Cytochrome c biogenesis FC OS=Cucumis melo var. momordica OX=2034244 GN=ccmFc PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 3.6e-110
Identity = 213/260 (81.92%), Postives = 221/260 (85.00%), Query Frame = 0 

Query: 25  MVQQNNFFFFITFMVVPCGMTAPILFQWFVSRDVSTGALFSNGTIIPIPISLFLLLVYLH 84
           MVQ NNFFFFIT MVVP G  AP+LFQWFVSRDV TGA  SNGTIIPIPISLF LLVYLH
Sbjct: 1   MVQLNNFFFFITSMVVPRGTAAPVLFQWFVSRDVPTGAPSSNGTIIPIPISLFPLLVYLH 60

Query: 85  SRKFIHFMDGAKGGVLVRASCPILLPDIIGRILFETQARKASFCFIRLIHFLLLSFKGEV 144
           SRKFI  MDGAK GVLVRAS PILLPDIIGR   ET+ARKASF F+ LIHFLLLS KG+ 
Sbjct: 61  SRKFIRSMDGAKSGVLVRASRPILLPDIIGRSSSETRARKASFRFLPLIHFLLLSSKGDF 120

Query: 145 FYFSSFCGVFCLLFFRTLFFLPPHSSVKCEWAQRRKGQRLRPLFIEVGNEHGLNSKMRCS 204
            YFSSFCGV CLLFFRTLF LP HSS K E A+RRKGQRLRPLFIE GNE GLNSKMRCS
Sbjct: 121 SYFSSFCGVLCLLFFRTLFSLPRHSSAKRERARRRKGQRLRPLFIEAGNEQGLNSKMRCS 180

Query: 205 GYPHLERRVSDFGPVAFLVCPSLSGACVWGVLPKTELEALALPMSRKLMALGHDYYQKAP 264
           G+PHLERRVS FGPVAF V PS  GACV GVLP+  LEALALP SR+LMALGHDYYQKAP
Sbjct: 181 GHPHLERRVSGFGPVAFPVRPSSGGACVGGVLPEIGLEALALPTSRQLMALGHDYYQKAP 240

Query: 265 RKIHISHGGVCIFILGVLLS 285
            KIHISHGGVCIFILGVLLS
Sbjct: 241 MKIHISHGGVCIFILGVLLS 260

[Close]
BLAST of Cmc04g0100611 vs. TAIR 10
Match: ATMG00180.1 (cytochrome C biogenesis 452 )

HSP 1 Score: 336.3 bits (861), Expect = 2.5e-92
Identity = 182/264 (68.94%), Postives = 199/264 (75.38%), Query Frame = 0 

Query: 25  MVQQNNFFFFITFMVVPCGMTAPILFQWFVSRDVSTGALFSNGTIIPIPISLFLLLVYLH 84
           MVQ +NFFFFI FMVVPCG  AP+L +WFVSRDV TGA FSNGTIIPIPIS F LLVYLH
Sbjct: 1   MVQLHNFFFFIIFMVVPCGTAAPVLLKWFVSRDVPTGAPFSNGTIIPIPISSFPLLVYLH 60

Query: 85  SRKFIHFMDGAKGGVLVRASCPILLPDIIGRILFETQARKASFCFIRLIHFLLLSFKGEV 144
           SRK I  MDGAK GVLVRAS PILLPDIIGR   ET+ARKA F F+ ++HF LL  KG+ 
Sbjct: 61  SRKIIRSMDGAKSGVLVRASRPILLPDIIGRSSSETRARKALFFFVPVLHFRLLESKGDF 120

Query: 145 FYFSSFCGVFCLLFFRTLFFLPPHSSVKCEWAQRRKGQRLRPLFIEVGNEHGLNSKMRCS 204
            Y  SFCGV CLLFFRT  FL    S K E A+RRKGQ LRP     GNE   N KMRCS
Sbjct: 121 SYLESFCGVLCLLFFRTFLFLARDRSAKRERARRRKGQTLRP----NGNEQRRNDKMRCS 180

Query: 205 GYPH--LERRVSDFGPVAFLVCPSLSGACVWGVLPKTELEALALPMSRKLMAL--GHDYY 264
           G+PH  LERRV  FGP+AF V P L GACV GV P+  LEALALP SR+LMA+  GHDYY
Sbjct: 181 GHPHLDLERRVEGFGPLAFPVPPELGGACVGGVPPEIGLEALALPRSRQLMAMAVGHDYY 240

Query: 265 QKAPRKIHISHGGVCIFILGVLLS 285
           QK P K++ISHGGVCI +LGVLLS
Sbjct: 241 QKVPMKMNISHGGVCICMLGVLLS 260

[Close]
BLAST of Cmc04g0100611 vs. TAIR 10
Match: AT2G07815.1 (BEST Arabidopsis thaliana protein match is: cytochrome C biogenesis 452 (TAIR:ATMG00180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 139.4 bits (350), Expect = 4.6e-33
Identity = 70/90 (77.78%), Postives = 75/90 (83.33%), Query Frame = 0 

Query: 11  LTFSREAKLEQIDQMVQQNNFFFFITFMVVPCGMTAPILFQWFVSRDVSTGALFSNGTII 70
           L F REAKLE+I+QMVQ +NFFFFI FMVVPCG  AP+L +WFVSRDV TGA FSNGTII
Sbjct: 159 LLFFREAKLERIEQMVQLHNFFFFIIFMVVPCGTAAPVLLKWFVSRDVPTGAPFSNGTII 218

Query: 71  PIPISLFLLLVYLHSRKFIHFMDGAKGGVL 101
           PIPIS F LLVYLHSRK I  MDGAK GVL
Sbjct: 219 PIPISSFPLLVYLHSRKIIRSMDGAKSGVL 248

The following BLAST results are available for this feature:
BLAST of Cmc04g0100611 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0051165.12.0e-15594.58cytochrome c biogenesis FC [Cucumis melo var. makuwa][more]
KAA0034869.12.2e-12281.69cytochrome c biogenesis FC [Cucumis melo var. makuwa] >TYJ96716.1 cytochrome c b... [more]
TYK03736.13.0e-11195.31cytochrome c biogenesis FC [Cucumis melo var. makuwa][more]
AEN56115.17.4e-11081.92cytochrome c biogenesis FC [Cucumis melo subsp. melo][more]
AZP40277.17.4e-11081.92cytochrome c biogenesis FC [Cucumis melo var. momordica][more]
BLAST of Cmc04g0100611 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P932862.0e-8968.56Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein OS=Arabidopsi... [more]
P384525.4e-2351.77Uncharacterized mitochondrial protein ymf3 OS=Marchantia polymorpha OX=3197 GN=Y... [more]
P384516.0e-0635.33Uncharacterized mitochondrial protein ymf2 OS=Marchantia polymorpha OX=3197 GN=Y... [more]
BLAST of Cmc04g0100611 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UBZ99.6e-15694.58Cytochrome c biogenesis FC (Mitochondrion) OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5A7T0J21.1e-12281.69Cytochrome c biogenesis FC (Mitochondrion) OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5D3BZV91.4e-11195.31Cytochrome c biogenesis FC (Mitochondrion) OS=Cucumis melo var. makuwa OX=119469... [more]
G3EU313.6e-11081.92Cytochrome c biogenesis FC OS=Cucumis melo subsp. melo OX=412675 GN=ccmFc PE=4 S... [more]
A0A3S5HPI53.6e-11081.92Cytochrome c biogenesis FC OS=Cucumis melo var. momordica OX=2034244 GN=ccmFc PE... [more]
BLAST of Cmc04g0100611 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00180.12.5e-9268.94cytochrome C biogenesis 452 [more]
AT2G07815.14.6e-3377.78BEST Arabidopsis thaliana protein match is: cytochrome C biogenesis 452 (TAIR:AT... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044955Cytochrome c biogenesis CcmF C-terminal-like mitochondrial proteinPANTHERPTHR36010CYTOCHROME C BIOGENESIS CCMF C-TERMINAL-LIKE MITOCHONDRIAL PROTEIN-RELATEDcoord: 25..284

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0100611.1Cmc04g0100611.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0017004 cytochrome complex assembly
cellular_component GO:0016020 membrane
cellular_component GO:0005739 mitochondrion