Cmc04g0100011 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0100011
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr04: 15868432 .. 15869307 (+)
RNA-Seq Expression	Cmc04g0100011
Synteny	Cmc04g0100011

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCAGTCCTTTGGCCTTATTAGTGTTGATGGGACGAATCCCTGGATTTTGGACTCGGGGCCCACAGATCACTTGACAGGTTTCTCGGAGCATTTTGTCACTTATACCCCCTATGCTGGTAATGTGAAAATCTGGATAGCCGATGGCTCTTTAGATCCGATTGCTGGAAAAGGACAAATAGTCCTCTTTGACGGTTTCTCCCTCCAGAATGTTTTGCATGTGCCTAAGCTTTCTTACAATCTGTTATCTATCAGTAAGATCACTCGTGAGCTGCACTGTAAAGCTACTTTCTTACCTGAGTCTGTTTTCTTTCAGGACTTGAATTTAGGGAGGACGATTGGCACTGCCCGGCATAGCAGGGGACTTTACATCCTTAATGATGATACCTCCGGTAGTAGTATCTCTACGACTAGTTTACTGTCTTCCTATTTTAGCACCTCTGAACATGACTTTATGTTGTGGCATTTTTGGTTAGGTCACTCGAACTTTACGTATATGAAATATTTGTTTCCTCATCTCTTTCTTAAAATAGATGTCTCCTCATTATCTTGTGATGTGTGCATTCGGGCAAAACAACATCGTGTTTCTTTTTCCTCACAACTATATAAACCCACACAACCGTTTACCCTTATCTATAGTGACGTTTGGGGTCCCTTCAAGGTCACTATCTCATCTGGGAAAAGGTGGTTTGTAACCTTCATTGATGATCATACCCGTCTTACCTGGGTCTACCTTATCATCGATAAATTTGAGGTTTCTGCTATTTTCCAAAACTTCTATCACACCATTGAAACACAATTCCATAAAAAATTGCTATTCTTTGGAGTGACAACGGTTGGGAATTCCAAAACCATAACCTTAGTGAATTTCTAG

mRNA sequence

ATGTCTCAGTCCTTTGGCCTTATTAGTGTTGATGGGACGAATCCCTGGATTTTGGACTCGGGGCCCACAGATCACTTGACAGGTTTCTCGGAGCATTTTGTCACTTATACCCCCTATGCTGGTAATGTGAAAATCTGGATAGCCGATGGCTCTTTAGATCCGATTGCTGGAAAAGGACAAATAGTCCTCTTTGACGGTTTCTCCCTCCAGAATGTTTTGCATGTGCCTAAGCTTTCTTACAATCTGTTATCTATCAGTAAGATCACTCGTGAGCTGCACTGTAAAGCTACTTTCTTACCTGAGTCTGTTTTCTTTCAGGACTTGAATTTAGGGAGGACGATTGGCACTGCCCGGCATAGCAGGGGACTTTACATCCTTAATGATGATACCTCCGGTAGTAGTATCTCTACGACTAGTTTACTGTCTTCCTATTTTAGCACCTCTGAACATGACTTTATGTTGTGGCATTTTTGGTTAGGTCACTCGAACTTTACGTATATGAAATATTTGTTTCCTCATCTCTTTCTTAAAATAGATGTCTCCTCATTATCTTGTGATGTGTGCATTCGGGCAAAACAACATCGTGTTTCTTTTTCCTCACAACTATATAAACCCACACAACCGTTTACCCTTATCTATAGTGACGTTTGGGGTCCCTTCAAGGTCACTATCTCATCTGGGAAAAGGTGGTTTGTAACCTTCATTGATGATCATACCCGTCTTACCTGGGTCTACCTTATCATCGATAAATTTGAGGTTTCTGCTATTTTCCAAAACTTCTATCACACCATTGAAACACAATTCCATAAAAAATTGCTATTCTTTGGAGTGACAACGGTTGGGAATTCCAAAACCATAACCTTAGTGAATTTCTAG

Coding sequence (CDS)

ATGTCTCAGTCCTTTGGCCTTATTAGTGTTGATGGGACGAATCCCTGGATTTTGGACTCGGGGCCCACAGATCACTTGACAGGTTTCTCGGAGCATTTTGTCACTTATACCCCCTATGCTGGTAATGTGAAAATCTGGATAGCCGATGGCTCTTTAGATCCGATTGCTGGAAAAGGACAAATAGTCCTCTTTGACGGTTTCTCCCTCCAGAATGTTTTGCATGTGCCTAAGCTTTCTTACAATCTGTTATCTATCAGTAAGATCACTCGTGAGCTGCACTGTAAAGCTACTTTCTTACCTGAGTCTGTTTTCTTTCAGGACTTGAATTTAGGGAGGACGATTGGCACTGCCCGGCATAGCAGGGGACTTTACATCCTTAATGATGATACCTCCGGTAGTAGTATCTCTACGACTAGTTTACTGTCTTCCTATTTTAGCACCTCTGAACATGACTTTATGTTGTGGCATTTTTGGTTAGGTCACTCGAACTTTACGTATATGAAATATTTGTTTCCTCATCTCTTTCTTAAAATAGATGTCTCCTCATTATCTTGTGATGTGTGCATTCGGGCAAAACAACATCGTGTTTCTTTTTCCTCACAACTATATAAACCCACACAACCGTTTACCCTTATCTATAGTGACGTTTGGGGTCCCTTCAAGGTCACTATCTCATCTGGGAAAAGGTGGTTTGTAACCTTCATTGATGATCATACCCGTCTTACCTGGGTCTACCTTATCATCGATAAATTTGAGGTTTCTGCTATTTTCCAAAACTTCTATCACACCATTGAAACACAATTCCATAAAAAATTGCTATTCTTTGGAGTGACAACGGTTGGGAATTCCAAAACCATAACCTTAGTGAATTTCTAG

Protein sequence

MSQSFGLISVDGTNPWILDSGPTDHLTGFSEHFVTYTPYAGNVKIWIADGSLDPIAGKGQIVLFDGFSLQNVLHVPKLSYNLLSISKITRELHCKATFLPESVFFQDLNLGRTIGTARHSRGLYILNDDTSGSSISTTSLLSSYFSTSEHDFMLWHFWLGHSNFTYMKYLFPHLFLKIDVSSLSCDVCIRAKQHRVSFSSQLYKPTQPFTLIYSDVWGPFKVTISSGKRWFVTFIDDHTRLTWVYLIIDKFEVSAIFQNFYHTIETQFHKKLLFFGVTTVGNSKTITLVNF

Homology

[Close]

BLAST of Cmc04g0100011 vs. NCBI nr
Match: KAA0066242.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYJ97679.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 487.3 bits (1253), Expect = 9.4e-134
Identity = 241/272 (88.60%), Postives = 248/272 (91.18%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGPTDHLTGFSEHFVTYTPYAGNVKIWIADGSLDPIAGKGQ 60
           M Q   LISVDGTN WILDS  TDHLTGFSEHFVTYTP AGN KI I DGSL PIAGKGQ
Sbjct: 91  MFQPLDLISVDGTNLWILDSRATDHLTGFSEHFVTYTPCAGNEKIRIVDGSLAPIAGKGQ 150

Query: 61  IVLFDGFSLQNVLHVPKLSYNLLSISKITRELHCKATFLPESVFFQDLNLGRTIGTARHS 120
           I+L+DGFSLQNVLHVPKLSYNLLSISKITRELH KATFLPESV+FQ+LN GRTIGTARHS
Sbjct: 151 IILYDGFSLQNVLHVPKLSYNLLSISKITRELHYKATFLPESVYFQNLNSGRTIGTARHS 210

Query: 121 RGLYILNDDTSGSSISTTSLLSSYFSTSEHDFMLWHFWLGHSNFTYMKYLFPHLFLKIDV 180
           RGLYILNDDTSGSSISTTSLLSSY STSEHD+MLWHF LGH NFTYMKYLFPHLFLKIDV
Sbjct: 211 RGLYILNDDTSGSSISTTSLLSSYLSTSEHDYMLWHFRLGHPNFTYMKYLFPHLFLKIDV 270

Query: 181 SSLSCDVCIRAKQHRVSFSSQLYKPTQPFTLIYSDVWGPFKVTISSGKRWFVTFIDDHTR 240
           SSLSCDVCIRAKQHRVSF SQ YKPTQPFTLI+SDVWGP KVT  SGKRWFVTFIDDHTR
Sbjct: 271 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFTLIHSDVWGPSKVTTLSGKRWFVTFIDDHTR 330

Query: 241 LTWVYLIIDKFEVSAIFQNFYHTIETQFHKKL 273
           LTWVYLI DK EVSAIFQNFYHTIETQFHKK+
Sbjct: 331 LTWVYLITDKSEVSAIFQNFYHTIETQFHKKI 362

[Close]

BLAST of Cmc04g0100011 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 464.2 bits (1193), Expect = 8.6e-127
Identity = 227/272 (83.46%), Postives = 242/272 (88.97%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGPTDHLTGFSEHFVTYTPYAGNVKIWIADGSLDPIAGKGQ 60
           M QS GLISVDG NPWILDSG TDHLTG SEHF++Y P AGN KI IADGSL PIAGKGQ
Sbjct: 468 MPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPIAGKGQ 527

Query: 61  IVLFDGFSLQNVLHVPKLSYNLLSISKITRELHCKATFLPESVFFQDLNLGRTIGTARHS 120
           IV FDGF+LQNVLHVPKLSYNLLSISKITRELHCKA FLPESV+FQD++ GRTIGTARHS
Sbjct: 528 IVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIGTARHS 587

Query: 121 RGLYILNDDTSGSSISTTSLLSSYFSTSEHDFMLWHFWLGHSNFTYMKYLFPHLFLKIDV 180
           RGLYIL+DDTS SS+S  SLLSSYFSTSE D MLWHF LGH NFTYM++LFPHLF K+DV
Sbjct: 588 RGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPHLFSKVDV 647

Query: 181 SSLSCDVCIRAKQHRVSFSSQLYKPTQPFTLIYSDVWGPFKVTISSGKRWFVTFIDDHTR 240
           SSLSCDVCIRAKQHRVSF SQ YKPTQPF LI+SDVWGP KVT SSGKRWFVTFIDDHTR
Sbjct: 648 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTR 707

Query: 241 LTWVYLIIDKFEVSAIFQNFYHTIETQFHKKL 273
           LTWVYLI DK EV +IFQNFYHTI+TQFH K+
Sbjct: 708 LTWVYLISDKSEVPSIFQNFYHTIKTQFHTKI 739

[Close]

BLAST of Cmc04g0100011 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 464.2 bits (1193), Expect = 8.6e-127
Identity = 227/272 (83.46%), Postives = 242/272 (88.97%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGPTDHLTGFSEHFVTYTPYAGNVKIWIADGSLDPIAGKGQ 60
           M QS GLISVDG NPWILDSG TDHLTG SEHF++Y P AGN KI IADGSL PIAGKGQ
Sbjct: 468 MPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPIAGKGQ 527

Query: 61  IVLFDGFSLQNVLHVPKLSYNLLSISKITRELHCKATFLPESVFFQDLNLGRTIGTARHS 120
           IV FDGF+LQNVLHVPKLSYNLLSISKITRELHCKA FLPESV+FQD++ GRTIGTARHS
Sbjct: 528 IVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIGTARHS 587

Query: 121 RGLYILNDDTSGSSISTTSLLSSYFSTSEHDFMLWHFWLGHSNFTYMKYLFPHLFLKIDV 180
           RGLYIL+DDTS SS+S  SLLSSYFSTSE D MLWHF LGH NFTYM++LFPHLF K+DV
Sbjct: 588 RGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPHLFSKVDV 647

Query: 181 SSLSCDVCIRAKQHRVSFSSQLYKPTQPFTLIYSDVWGPFKVTISSGKRWFVTFIDDHTR 240
           SSLSCDVCIRAKQHRVSF SQ YKPTQPF LI+SDVWGP KVT SSGKRWFVTFIDDHTR
Sbjct: 648 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTR 707

Query: 241 LTWVYLIIDKFEVSAIFQNFYHTIETQFHKKL 273
           LTWVYLI DK EV +IFQNFYHTI+TQFH K+
Sbjct: 708 LTWVYLISDKSEVPSIFQNFYHTIKTQFHTKI 739

[Close]

BLAST of Cmc04g0100011 vs. NCBI nr
Match: KAA0048203.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 464.2 bits (1193), Expect = 8.6e-127
Identity = 227/272 (83.46%), Postives = 242/272 (88.97%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGPTDHLTGFSEHFVTYTPYAGNVKIWIADGSLDPIAGKGQ 60
           M QS GLISVDG NPWILDSG TDHLTG SEHF++Y P AGN KI IADGSL PIAGKGQ
Sbjct: 468 MPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPIAGKGQ 527

Query: 61  IVLFDGFSLQNVLHVPKLSYNLLSISKITRELHCKATFLPESVFFQDLNLGRTIGTARHS 120
           IV FDGF+LQNVLHVPKLSYNLLSISKITRELHCKA FLPESV+FQD++ GRTIGTARHS
Sbjct: 528 IVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIGTARHS 587

Query: 121 RGLYILNDDTSGSSISTTSLLSSYFSTSEHDFMLWHFWLGHSNFTYMKYLFPHLFLKIDV 180
           RGLYIL+DDTS SS+S  SLLSSYFSTSE D MLWHF LGH NFTYM++LFPHLF K+DV
Sbjct: 588 RGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPHLFSKVDV 647

Query: 181 SSLSCDVCIRAKQHRVSFSSQLYKPTQPFTLIYSDVWGPFKVTISSGKRWFVTFIDDHTR 240
           SSLSCDVCIRAKQHRVSF SQ YKPTQPF LI+SDVWGP KVT SSGKRWFVTFIDDHTR
Sbjct: 648 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTR 707

Query: 241 LTWVYLIIDKFEVSAIFQNFYHTIETQFHKKL 273
           LTWVYLI DK EV +IFQNFYHTI+TQFH K+
Sbjct: 708 LTWVYLISDKSEVPSIFQNFYHTIKTQFHTKI 739

[Close]

BLAST of Cmc04g0100011 vs. NCBI nr
Match: KAA0025363.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 464.2 bits (1193), Expect = 8.6e-127
Identity = 227/272 (83.46%), Postives = 242/272 (88.97%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGPTDHLTGFSEHFVTYTPYAGNVKIWIADGSLDPIAGKGQ 60
           M QS GLISVDG NPWILDSG TDHLTG SEHF++Y P AGN KI IADGSL PIAGKGQ
Sbjct: 500 MPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPIAGKGQ 559

Query: 61  IVLFDGFSLQNVLHVPKLSYNLLSISKITRELHCKATFLPESVFFQDLNLGRTIGTARHS 120
           IV FDGF+LQNVLHVPKLSYNLLSISKITRELHCKA FLPESV+FQD++ GRTIGTARHS
Sbjct: 560 IVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIGTARHS 619

Query: 121 RGLYILNDDTSGSSISTTSLLSSYFSTSEHDFMLWHFWLGHSNFTYMKYLFPHLFLKIDV 180
           RGLYIL+DDTS SS+S  SLLSSYFSTSE D MLWHF LGH NFTYM++LFPHLF K+DV
Sbjct: 620 RGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPHLFSKVDV 679

Query: 181 SSLSCDVCIRAKQHRVSFSSQLYKPTQPFTLIYSDVWGPFKVTISSGKRWFVTFIDDHTR 240
           SSLSCDVCIRAKQHRVSF SQ YKPTQPF LI+SDVWGP KVT SSGKRWFVTFIDDHTR
Sbjct: 680 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTR 739

Query: 241 LTWVYLIIDKFEVSAIFQNFYHTIETQFHKKL 273
           LTWVYLI DK EV +IFQNFYHTI+TQFH K+
Sbjct: 740 LTWVYLISDKSEVPSIFQNFYHTIKTQFHTKI 771

[Close]

BLAST of Cmc04g0100011 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.7e-27
Identity = 81/266 (30.45%), Postives = 125/266 (46.99%), Query Frame = 0


Query: 13  TNPWILDSGPTDHLTGFSEHFVTYTPYAGNVKIWIADGSLDPIAGKGQIVLFD---GFSL 72
           +N W+LDSG T H+T    +   + PY G   + +ADGS  PI+  G   L       +L
Sbjct: 328 SNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNL 387

Query: 73  QNVLHVPKLSYNLLSISKITRELHCKATFLPESVFFQDLNLGRTIGTARHSRGLYILNDD 132
            N+L+VP +  NL+S+ ++         F P S   +DLN G  +   +    LY    +
Sbjct: 388 HNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELY----E 447

Query: 133 TSGSSISTTSLLSSYFSTSEHDFMLWHFWLGHSNFTYMKYLFPHLFLKIDVSS---LSCD 192
              +S    SL +S  S + H    WH  LGH   + +  +  +  L +   S   LSC 
Sbjct: 448 WPIASSQPVSLFASPSSKATHS--SWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCS 507

Query: 193 VCIRAKQHRVSFSSQLYKPTQPFTLIYSDVWGPFKVTISSGKRWFVTFIDDHTRLTWVYL 252
            C+  K ++V FS      T+P   IYSDVW    +      R++V F+D  TR TW+Y 
Sbjct: 508 DCLINKSNKVPFSQSTINSTRPLEYIYSDVWSS-PILSHDNYRYYVIFVDHFTRYTWLYP 567

Query: 253 IIDKFEVSAIFQNFYHTIETQFHKKL 273
           +  K +V   F  F + +E +F  ++
Sbjct: 568 LKQKSQVKETFITFKNLLENRFQTRI 586

[Close]

BLAST of Cmc04g0100011 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.3e-26
Identity = 82/265 (30.94%), Postives = 123/265 (46.42%), Query Frame = 0


Query: 14  NPWILDSGPTDHLTGFSEHFVTYTPYAGNVKIWIADGSLDPIAGKGQIVL---FDGFSLQ 73
           N W+LDSG T H+T    +   + PY G   + IADGS  PI   G   L        L 
Sbjct: 308 NNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLN 367

Query: 74  NVLHVPKLSYNLLSISKITRELHCKATFLPESVFFQDLNLGRTIGTARHSRGLYILNDDT 133
            VL+VP +  NL+S+ ++         F P S   +DLN G  +   +    LY    + 
Sbjct: 368 KVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELY----EW 427

Query: 134 SGSSISTTSLLSSYFSTSEHDFMLWHFWLGHSNFTYMKYLFPHLFLKIDVSS---LSCDV 193
             +S    S+ +S  S + H    WH  LGH +   +  +  +  L +   S   LSC  
Sbjct: 428 PIASSQAVSMFASPCSKATHS--SWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSD 487

Query: 194 CIRAKQHRVSFSSQLYKPTQPFTLIYSDVWGPFKVTISSGKRWFVTFIDDHTRLTWVYLI 253
           C   K H+V FS+     ++P   IYSDVW    ++I +  R++V F+D  TR TW+Y +
Sbjct: 488 CFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPILSIDN-YRYYVIFVDHFTRYTWLYPL 547

Query: 254 IDKFEVSAIFQNFYHTIETQFHKKL 273
             K +V   F  F   +E +F  ++
Sbjct: 548 KQKSQVKDTFIIFKSLVENRFQTRI 565

[Close]

BLAST of Cmc04g0100011 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 5.6e-20
Identity = 78/268 (29.10%), Postives = 123/268 (45.90%), Query Frame = 0


Query: 16  WILDSGPTDHLTGFSEHFVTYTPYAGNV-KIWIADGSLDPIAGKGQIVLFDGFS----LQ 75
           W++D+  + H T   + F  Y   AG+   + + + S   IAG G I +         L+
Sbjct: 294 WVVDTAASHHATPVRDLFCRYV--AGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLK 353

Query: 76  NVLHVPKLSYNLLSISKITRELHCKATFLPESVFFQD---LNLGRTIGTARHSRG-LYIL 135
           +V HVP L  NL+S   + R+ +       ES F      L  G  +     +RG LY  
Sbjct: 354 DVRHVPDLRMNLISGIALDRDGY-------ESYFANQKWRLTKGSLVIAKGVARGTLYRT 413

Query: 136 NDDTSGSSISTTSLLSSYFSTSEHDFMLWHFWLGHSNFTYMKYLFPHLFLKI--DVSSLS 195
           N +     ++         +  E    LWH  +GH +   ++ L     +      +   
Sbjct: 414 NAEICQGELNA--------AQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKP 473

Query: 196 CDVCIRAKQHRVSFSSQLYKPTQPFTLIYSDVWGPFKVTISSGKRWFVTFIDDHTRLTWV 255
           CD C+  KQHRVSF +   +      L+YSDV GP ++    G ++FVTFIDD +R  WV
Sbjct: 474 CDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWV 533

Query: 256 YLIIDKFEVSAIFQNFYHTIETQFHKKL 273
           Y++  K +V  +FQ F+  +E +  +KL
Sbjct: 534 YILKTKDQVFQVFQKFHALVERETGRKL 544

[Close]

BLAST of Cmc04g0100011 vs. ExPASy Swiss-Prot
Match: Q12501 (Transposon Ty2-OR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-OR2 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.6e-11
Identity = 71/281 (25.27%), Postives = 130/281 (46.26%), Query Frame = 0


Query: 17  ILDSGPTDHLTGFSEHFVTYTPYAGNVKIWIADGSLDPIAGKGQIVLFDGFSLQN----- 76
           ++DSG +  L   S H++ +      + I  A     PI   G +     F+ QN     
Sbjct: 455 LIDSGASQTLVR-SAHYLHHATPNSEINIVDAQKQDIPINAIGNL----HFNFQNGTKTS 514

Query: 77  --VLHVPKLSYNLLSISKITRELHCKATFLPESVFFQDLNLGRTIGTARHSRGLYILNDD 136
              LH P ++Y+LLS+S++T + +  A F   ++   D  +   I   +H    ++    
Sbjct: 515 IKALHTPNIAYDLLSLSELTNQ-NITACFTRNTLERSDGTVLAPI--VKHGDFYWLSKKY 574

Query: 137 TSGSSIS--TTSLLSSYFSTSEHDFMLWHFWLGHSNFTYMK---------YLFPHLFLKI 196
              S IS  T + ++   S +++ + L H  LGH+NF  ++         YL        
Sbjct: 575 LIPSHISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWS 634

Query: 197 DVSSLSCDVCI--RAKQHRVSFSSQL--YKPTQPFTLIYSDVWGPFKVTISSGKRWFVTF 256
           + S+  C  C+  ++ +HR    S+L   +  +PF  +++D++GP      S   +F++F
Sbjct: 635 NASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISF 694

Query: 257 IDDHTRLTWVYLIIDKFEVSA--IFQNFYHTIETQFHKKLL 274
            D+ TR  WVY + D+ E S   +F +    I+ QF+ ++L
Sbjct: 695 TDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVL 727

[Close]

BLAST of Cmc04g0100011 vs. ExPASy Swiss-Prot
Match: Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-10
Identity = 70/281 (24.91%), Postives = 129/281 (45.91%), Query Frame = 0


Query: 17  ILDSGPTDHLTGFSEHFVTYTPYAGNVKIWIADGSLDPIAGKGQIVLFDGFSLQN----- 76
           ++DSG +  L   S H++ +      + I  A     PI   G +     F+ QN     
Sbjct: 455 LIDSGASQTLVR-SAHYLHHATPNSEINIVDAQKQDIPINAIGNL----HFNFQNGTKTS 514

Query: 77  --VLHVPKLSYNLLSISKITRELHCKATFLPESVFFQDLNLGRTIGTARHSRGLYILNDD 136
              LH P ++Y+LLS+S++  + +  A F   ++   D  +   I   +H    ++    
Sbjct: 515 IKALHTPNIAYDLLSLSELANQ-NITACFTRNTLERSDGTVLAPI--VKHGDFYWLSKKY 574

Query: 137 TSGSSIS--TTSLLSSYFSTSEHDFMLWHFWLGHSNFTYMK---------YLFPHLFLKI 196
              S IS  T + ++   S +++ + L H  LGH+NF  ++         YL        
Sbjct: 575 LIPSHISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWS 634

Query: 197 DVSSLSCDVCI--RAKQHRVSFSSQL--YKPTQPFTLIYSDVWGPFKVTISSGKRWFVTF 256
           + S+  C  C+  ++ +HR    S+L   +  +PF  +++D++GP      S   +F++F
Sbjct: 635 NASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISF 694

Query: 257 IDDHTRLTWVYLIIDKFEVSA--IFQNFYHTIETQFHKKLL 274
            D+ TR  WVY + D+ E S   +F +    I+ QF+ ++L
Sbjct: 695 TDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVL 727

[Close]

BLAST of Cmc04g0100011 vs. ExPASy TrEMBL
Match: A0A5A7VD20 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37G00520 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 4.6e-134
Identity = 241/272 (88.60%), Postives = 248/272 (91.18%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGPTDHLTGFSEHFVTYTPYAGNVKIWIADGSLDPIAGKGQ 60
           M Q   LISVDGTN WILDS  TDHLTGFSEHFVTYTP AGN KI I DGSL PIAGKGQ
Sbjct: 91  MFQPLDLISVDGTNLWILDSRATDHLTGFSEHFVTYTPCAGNEKIRIVDGSLAPIAGKGQ 150

Query: 61  IVLFDGFSLQNVLHVPKLSYNLLSISKITRELHCKATFLPESVFFQDLNLGRTIGTARHS 120
           I+L+DGFSLQNVLHVPKLSYNLLSISKITRELH KATFLPESV+FQ+LN GRTIGTARHS
Sbjct: 151 IILYDGFSLQNVLHVPKLSYNLLSISKITRELHYKATFLPESVYFQNLNSGRTIGTARHS 210

Query: 121 RGLYILNDDTSGSSISTTSLLSSYFSTSEHDFMLWHFWLGHSNFTYMKYLFPHLFLKIDV 180
           RGLYILNDDTSGSSISTTSLLSSY STSEHD+MLWHF LGH NFTYMKYLFPHLFLKIDV
Sbjct: 211 RGLYILNDDTSGSSISTTSLLSSYLSTSEHDYMLWHFRLGHPNFTYMKYLFPHLFLKIDV 270

Query: 181 SSLSCDVCIRAKQHRVSFSSQLYKPTQPFTLIYSDVWGPFKVTISSGKRWFVTFIDDHTR 240
           SSLSCDVCIRAKQHRVSF SQ YKPTQPFTLI+SDVWGP KVT  SGKRWFVTFIDDHTR
Sbjct: 271 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFTLIHSDVWGPSKVTTLSGKRWFVTFIDDHTR 330

Query: 241 LTWVYLIIDKFEVSAIFQNFYHTIETQFHKKL 273
           LTWVYLI DK EVSAIFQNFYHTIETQFHKK+
Sbjct: 331 LTWVYLITDKSEVSAIFQNFYHTIETQFHKKI 362

[Close]

BLAST of Cmc04g0100011 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 4.1e-127
Identity = 227/272 (83.46%), Postives = 242/272 (88.97%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGPTDHLTGFSEHFVTYTPYAGNVKIWIADGSLDPIAGKGQ 60
           M QS GLISVDG NPWILDSG TDHLTG SEHF++Y P AGN KI IADGSL PIAGKGQ
Sbjct: 468 MPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPIAGKGQ 527

Query: 61  IVLFDGFSLQNVLHVPKLSYNLLSISKITRELHCKATFLPESVFFQDLNLGRTIGTARHS 120
           IV FDGF+LQNVLHVPKLSYNLLSISKITRELHCKA FLPESV+FQD++ GRTIGTARHS
Sbjct: 528 IVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIGTARHS 587

Query: 121 RGLYILNDDTSGSSISTTSLLSSYFSTSEHDFMLWHFWLGHSNFTYMKYLFPHLFLKIDV 180
           RGLYIL+DDTS SS+S  SLLSSYFSTSE D MLWHF LGH NFTYM++LFPHLF K+DV
Sbjct: 588 RGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPHLFSKVDV 647

Query: 181 SSLSCDVCIRAKQHRVSFSSQLYKPTQPFTLIYSDVWGPFKVTISSGKRWFVTFIDDHTR 240
           SSLSCDVCIRAKQHRVSF SQ YKPTQPF LI+SDVWGP KVT SSGKRWFVTFIDDHTR
Sbjct: 648 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTR 707

Query: 241 LTWVYLIIDKFEVSAIFQNFYHTIETQFHKKL 273
           LTWVYLI DK EV +IFQNFYHTI+TQFH K+
Sbjct: 708 LTWVYLISDKSEVPSIFQNFYHTIKTQFHTKI 739

[Close]

BLAST of Cmc04g0100011 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 4.1e-127
Identity = 227/272 (83.46%), Postives = 242/272 (88.97%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGPTDHLTGFSEHFVTYTPYAGNVKIWIADGSLDPIAGKGQ 60
           M QS GLISVDG NPWILDSG TDHLTG SEHF++Y P AGN KI IADGSL PIAGKGQ
Sbjct: 468 MPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPIAGKGQ 527

Query: 61  IVLFDGFSLQNVLHVPKLSYNLLSISKITRELHCKATFLPESVFFQDLNLGRTIGTARHS 120
           IV FDGF+LQNVLHVPKLSYNLLSISKITRELHCKA FLPESV+FQD++ GRTIGTARHS
Sbjct: 528 IVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIGTARHS 587

Query: 121 RGLYILNDDTSGSSISTTSLLSSYFSTSEHDFMLWHFWLGHSNFTYMKYLFPHLFLKIDV 180
           RGLYIL+DDTS SS+S  SLLSSYFSTSE D MLWHF LGH NFTYM++LFPHLF K+DV
Sbjct: 588 RGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPHLFSKVDV 647

Query: 181 SSLSCDVCIRAKQHRVSFSSQLYKPTQPFTLIYSDVWGPFKVTISSGKRWFVTFIDDHTR 240
           SSLSCDVCIRAKQHRVSF SQ YKPTQPF LI+SDVWGP KVT SSGKRWFVTFIDDHTR
Sbjct: 648 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTR 707

Query: 241 LTWVYLIIDKFEVSAIFQNFYHTIETQFHKKL 273
           LTWVYLI DK EV +IFQNFYHTI+TQFH K+
Sbjct: 708 LTWVYLISDKSEVPSIFQNFYHTIKTQFHTKI 739

[Close]

BLAST of Cmc04g0100011 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 4.1e-127
Identity = 227/272 (83.46%), Postives = 242/272 (88.97%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGPTDHLTGFSEHFVTYTPYAGNVKIWIADGSLDPIAGKGQ 60
           M QS GLISVDG NPWILDSG TDHLTG SEHF++Y P AGN KI IADGSL PIAGKGQ
Sbjct: 468 MPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPIAGKGQ 527

Query: 61  IVLFDGFSLQNVLHVPKLSYNLLSISKITRELHCKATFLPESVFFQDLNLGRTIGTARHS 120
           IV FDGF+LQNVLHVPKLSYNLLSISKITRELHCKA FLPESV+FQD++ GRTIGTARHS
Sbjct: 528 IVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIGTARHS 587

Query: 121 RGLYILNDDTSGSSISTTSLLSSYFSTSEHDFMLWHFWLGHSNFTYMKYLFPHLFLKIDV 180
           RGLYIL+DDTS SS+S  SLLSSYFSTSE D MLWHF LGH NFTYM++LFPHLF K+DV
Sbjct: 588 RGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPHLFSKVDV 647

Query: 181 SSLSCDVCIRAKQHRVSFSSQLYKPTQPFTLIYSDVWGPFKVTISSGKRWFVTFIDDHTR 240
           SSLSCDVCIRAKQHRVSF SQ YKPTQPF LI+SDVWGP KVT SSGKRWFVTFIDDHTR
Sbjct: 648 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTR 707

Query: 241 LTWVYLIIDKFEVSAIFQNFYHTIETQFHKKL 273
           LTWVYLI DK EV +IFQNFYHTI+TQFH K+
Sbjct: 708 LTWVYLISDKSEVPSIFQNFYHTIKTQFHTKI 739

[Close]

BLAST of Cmc04g0100011 vs. ExPASy TrEMBL
Match: A0A5A7SM64 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00220 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 4.1e-127
Identity = 227/272 (83.46%), Postives = 242/272 (88.97%), Query Frame = 0


Query: 1   MSQSFGLISVDGTNPWILDSGPTDHLTGFSEHFVTYTPYAGNVKIWIADGSLDPIAGKGQ 60
           M QS GLISVDG NPWILDSG TDHLTG SEHF++Y P AGN KI IADGSL PIAGKGQ
Sbjct: 468 MPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPIAGKGQ 527

Query: 61  IVLFDGFSLQNVLHVPKLSYNLLSISKITRELHCKATFLPESVFFQDLNLGRTIGTARHS 120
           IV FDGF+LQNVLHVPKLSYNLLSISKITRELHCKA FLPESV+FQD++ GRTIGTARHS
Sbjct: 528 IVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIGTARHS 587

Query: 121 RGLYILNDDTSGSSISTTSLLSSYFSTSEHDFMLWHFWLGHSNFTYMKYLFPHLFLKIDV 180
           RGLYIL+DDTS SS+S  SLLSSYFSTSE D MLWHF LGH NFTYM++LFPHLF K+DV
Sbjct: 588 RGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPHLFSKVDV 647

Query: 181 SSLSCDVCIRAKQHRVSFSSQLYKPTQPFTLIYSDVWGPFKVTISSGKRWFVTFIDDHTR 240
           SSLSCDVCIRAKQHRVSF SQ YKPTQPF LI+SDVWGP KVT SSGKRWFVTFIDDHTR
Sbjct: 648 SSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVTFIDDHTR 707

Query: 241 LTWVYLIIDKFEVSAIFQNFYHTIETQFHKKL 273
           LTWVYLI DK EV +IFQNFYHTI+TQFH K+
Sbjct: 708 LTWVYLISDKSEVPSIFQNFYHTIKTQFHTKI 739

The following BLAST results are available for this feature:

BLAST of Cmc04g0100011 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066242.1	9.4e-134	88.60	Beta-galactosidase [Cucumis melo var. makuwa] >TYJ97679.1 Beta-galactosidase [Cu...	[more]
TYJ99952.1	8.6e-127	83.46	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
TYK08054.1	8.6e-127	83.46	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0048203.1	8.6e-127	83.46	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0025363.1	8.6e-127	83.46	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0100011 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	4.7e-27	30.45	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.3e-26	30.94	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	5.6e-20	29.10	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q12501	3.6e-11	25.27	Transposon Ty2-OR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ...	[more]
Q12491	1.4e-10	24.91	Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc04g0100011 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VD20	4.6e-134	88.60	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37G00...	[more]
A0A5D3BJK7	4.1e-127	83.46	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	4.1e-127	83.46	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	4.1e-127	83.46	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]
A0A5A7SM64	4.1e-127	83.46	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G0...	[more]

BLAST of Cmc04g0100011 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 200..276 e-value: 2.0E-10 score: 42.3
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 122..193 e-value: 4.0E-13 score: 49.0
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 202..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0100011.1	Cmc04g0100011.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003676	nucleic acid binding