Cmc04g0097501 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0097501
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr04: 12649514 .. 12650701 (-)
RNA-Seq Expression	Cmc04g0097501
Synteny	Cmc04g0097501

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTCGAAAGAAAAGGTGAAGGCATGCCAGATTGAGATATCAGGCCATGTGATTGAAGTAACGCTGATAGTTCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGTATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCGTCAGAACCGGTGGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCCGTATAG

mRNA sequence

ATGTTGTCGAAAGAAAAGGTGAAGGCATGCCAGATTGAGATATCAGGCCATGTGATTGAAGTAACGCTGATAGTTCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGTATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCGTCAGAACCGGTGGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCCGTATAG

Coding sequence (CDS)

ATGTTGTCGAAAGAAAAGGTGAAGGCATGCCAGATTGAGATATCAGGCCATGTGATTGAAGTAACGCTGATAGTTCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGTATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCGTCAGAACCGGTGGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCCGTATAG

Protein sequence

MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSV

Homology

[Close]

BLAST of Cmc04g0097501 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 785.0 bits (2026), Expect = 3.0e-223
Identity = 393/394 (99.75%), Postives = 394/394 (100.00%), Query Frame = 0


Query: 1    MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
            MLSKEKVKACQIEI+GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS
Sbjct: 681  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 740

Query: 61   MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
            MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV
Sbjct: 741  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 800

Query: 121  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 801  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 860

Query: 181  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
            PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 861  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 920

Query: 241  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 300
            YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
Sbjct: 921  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 980

Query: 301  DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 360
            DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK
Sbjct: 981  DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 1040

Query: 361  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 395
            IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS
Sbjct: 1041 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 1074

[Close]

BLAST of Cmc04g0097501 vs. NCBI nr
Match: KAA0037291.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 783.5 bits (2022), Expect = 8.6e-223
Identity = 392/394 (99.49%), Postives = 394/394 (100.00%), Query Frame = 0


Query: 1   MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
           MLSKEKVKACQIEI+GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS
Sbjct: 594 MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 653

Query: 61  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
           MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV
Sbjct: 654 MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 713

Query: 121 FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
           FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 714 FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 773

Query: 181 PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
           PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 774 PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 833

Query: 241 YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 300
           YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
Sbjct: 834 YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 893

Query: 301 DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 360
           DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK
Sbjct: 894 DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 953

Query: 361 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 395
           I+AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS
Sbjct: 954 IKAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 987

[Close]

BLAST of Cmc04g0097501 vs. NCBI nr
Match: KAA0043391.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 782.7 bits (2020), Expect = 1.5e-222
Identity = 392/395 (99.24%), Postives = 394/395 (99.75%), Query Frame = 0


Query: 1    MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
            MLSKEKVKACQIEI+GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS
Sbjct: 753  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 812

Query: 61   MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
            MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV
Sbjct: 813  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 872

Query: 121  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 873  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 932

Query: 181  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
            PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 933  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 992

Query: 241  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 300
            YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
Sbjct: 993  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 1052

Query: 301  DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 360
            DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK
Sbjct: 1053 DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 1112

Query: 361  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSV 396
            IEAVTGWTRPSTVSEVRSFLGLAGYY RFVENFS+
Sbjct: 1113 IEAVTGWTRPSTVSEVRSFLGLAGYYGRFVENFSL 1147

[Close]

BLAST of Cmc04g0097501 vs. NCBI nr
Match: KAA0066266.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 781.9 bits (2018), Expect = 2.5e-222
Identity = 392/394 (99.49%), Postives = 393/394 (99.75%), Query Frame = 0


Query: 1   MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
           MLSKEKVKACQIEI GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTF+PPS
Sbjct: 1   MLSKEKVKACQIEIVGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFHPPS 60

Query: 61  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
           MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV
Sbjct: 61  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120

Query: 121 FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
           FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 121 FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180

Query: 181 PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
           PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 181 PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240

Query: 241 YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 300
           YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
Sbjct: 241 YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 300

Query: 301 DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 360
           DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK
Sbjct: 301 DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 360

Query: 361 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 395
           IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS
Sbjct: 361 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 394

[Close]

BLAST of Cmc04g0097501 vs. NCBI nr
Match: KAA0038231.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 780.0 bits (2013), Expect = 9.6e-222
Identity = 390/394 (98.98%), Postives = 393/394 (99.75%), Query Frame = 0


Query: 1   MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
           MLSKEKVKACQIEI+GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS
Sbjct: 401 MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 460

Query: 61  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
           MASFKFKGGGSKSLPQVISAIRASKLLSQGTW ILASVVDTREADVSLSSEPVVRDYPDV
Sbjct: 461 MASFKFKGGGSKSLPQVISAIRASKLLSQGTWAILASVVDTREADVSLSSEPVVRDYPDV 520

Query: 121 FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
           FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 521 FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 580

Query: 181 PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
           PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 581 PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 640

Query: 241 YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 300
           YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
Sbjct: 641 YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 700

Query: 301 DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 360
           DILIYSKTEAEH+EHLRMVLQTLRDNKLY+KFSKCEFWLKQVSFLGHVVSKAGVSVDPAK
Sbjct: 701 DILIYSKTEAEHKEHLRMVLQTLRDNKLYSKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 760

Query: 361 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 395
           IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS
Sbjct: 761 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 794

[Close]

BLAST of Cmc04g0097501 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.5e-55
Identity = 101/254 (39.76%), Postives = 160/254 (62.99%), Query Frame = 0


Query: 146 PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCI 205
           PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ I
Sbjct: 206 PIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVI 265

Query: 206 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 265
           DYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G+HQ+ + +E + KTAF ++ 
Sbjct: 266 DYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKS 325

Query: 266 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 325
           GHYE++ M FGL NAPA F   MN + R  L+   +V++DDI+I+S +  EH   +++V 
Sbjct: 326 GHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVF 385

Query: 326 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 385
             L D  L  +  KCEF  K+ +FLGH+V+  G+  +P K++A+  +  P+   E+R+FL
Sbjct: 386 TKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFL 445

Query: 386 GLAGYYRRFVENFS 395
           GL GYYR+F+ N++
Sbjct: 446 GLTGYYRKFIPNYA 459

[Close]

BLAST of Cmc04g0097501 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 217.6 bits (553), Expect = 2.5e-55
Identity = 114/281 (40.57%), Postives = 169/281 (60.14%), Query Frame = 0


Query: 117 YPDVFPEELPGLPP---HREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKG 176
           Y ++   +LP  P    +  V+  IE++PG       PY +     +E+   +Q+LLD  
Sbjct: 564 YREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNK 623

Query: 177 FIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS 236
           FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+
Sbjct: 624 FIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFT 683

Query: 237 KIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDT 296
            +DL SGYHQ+ ++ +D  KTAF +  G YE+ VM FGL NAP+ F   M   FR+    
Sbjct: 684 TLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--R 743

Query: 297 FVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG 356
           FV V++DDILI+S++  EH +HL  VL+ L++  L  K  KC+F  ++  FLG+ +    
Sbjct: 744 FVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQK 803

Query: 357 VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 395
           ++    K  A+  +  P TV + + FLG+  YYRRF+ N S
Sbjct: 804 IAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCS 842

[Close]

BLAST of Cmc04g0097501 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 217.6 bits (553), Expect = 2.5e-55
Identity = 114/281 (40.57%), Postives = 169/281 (60.14%), Query Frame = 0


Query: 117 YPDVFPEELPGLPP---HREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKG 176
           Y ++   +LP  P    +  V+  IE++PG       PY +     +E+   +Q+LLD  
Sbjct: 590 YREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNK 649

Query: 177 FIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS 236
           FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+
Sbjct: 650 FIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFT 709

Query: 237 KIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDT 296
            +DL SGYHQ+ ++ +D  KTAF +  G YE+ VM FGL NAP+ F   M   FR+    
Sbjct: 710 TLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--R 769

Query: 297 FVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG 356
           FV V++DDILI+S++  EH +HL  VL+ L++  L  K  KC+F  ++  FLG+ +    
Sbjct: 770 FVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQK 829

Query: 357 VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 395
           ++    K  A+  +  P TV + + FLG+  YYRRF+ N S
Sbjct: 830 IAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCS 868

[Close]

BLAST of Cmc04g0097501 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.1e-54
Identity = 101/248 (40.73%), Postives = 162/248 (65.32%), Query Frame = 0


Query: 152 YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELN 211
           Y    A  +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272

Query: 212 KVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFI 271
           ++TV +R+P+P +D++  +L     F+ IDL  G+HQ+ +  E V KTAF +++GHYE++
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332

Query: 272 VMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDN 331
            M FGL NAPA F   MN + R  L+   +V++DDI+++S +  EH + L +V + L   
Sbjct: 333 RMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKA 392

Query: 332 KLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYY 391
            L  +  KCEF  ++ +FLGHV++  G+  +P KIEA+  +  P+   E+++FLGL GYY
Sbjct: 393 NLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

Query: 392 RRFVENFS 395
           R+F+ NF+
Sbjct: 453 RKFIPNFA 460

[Close]

BLAST of Cmc04g0097501 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.5e-52
Identity = 102/272 (37.50%), Postives = 166/272 (61.03%), Query Frame = 0


Query: 123 EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 182
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 183 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 242
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 243 QLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 302
            +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 303 LIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 362
           LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 363 AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 395
            V  W +P    E+R FLG   Y R+F+   S
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTS 660

[Close]

BLAST of Cmc04g0097501 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 785.0 bits (2026), Expect = 1.4e-223
Identity = 393/394 (99.75%), Postives = 394/394 (100.00%), Query Frame = 0


Query: 1    MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
            MLSKEKVKACQIEI+GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS
Sbjct: 681  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 740

Query: 61   MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
            MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV
Sbjct: 741  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 800

Query: 121  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 801  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 860

Query: 181  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
            PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 861  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 920

Query: 241  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 300
            YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
Sbjct: 921  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 980

Query: 301  DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 360
            DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK
Sbjct: 981  DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 1040

Query: 361  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 395
            IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS
Sbjct: 1041 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 1074

[Close]

BLAST of Cmc04g0097501 vs. ExPASy TrEMBL
Match: A0A5A7T6R9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3G00010 PE=4 SV=1)

HSP 1 Score: 783.5 bits (2022), Expect = 4.2e-223
Identity = 392/394 (99.49%), Postives = 394/394 (100.00%), Query Frame = 0


Query: 1   MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
           MLSKEKVKACQIEI+GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS
Sbjct: 594 MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 653

Query: 61  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
           MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV
Sbjct: 654 MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 713

Query: 121 FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
           FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 714 FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 773

Query: 181 PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
           PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 774 PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 833

Query: 241 YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 300
           YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
Sbjct: 834 YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 893

Query: 301 DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 360
           DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK
Sbjct: 894 DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 953

Query: 361 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 395
           I+AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS
Sbjct: 954 IKAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 987

[Close]

BLAST of Cmc04g0097501 vs. ExPASy TrEMBL
Match: A0A5A7TP96 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00630 PE=4 SV=1)

HSP 1 Score: 782.7 bits (2020), Expect = 7.1e-223
Identity = 392/395 (99.24%), Postives = 394/395 (99.75%), Query Frame = 0


Query: 1    MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
            MLSKEKVKACQIEI+GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS
Sbjct: 753  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 812

Query: 61   MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
            MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV
Sbjct: 813  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 872

Query: 121  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 873  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 932

Query: 181  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
            PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 933  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 992

Query: 241  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 300
            YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
Sbjct: 993  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 1052

Query: 301  DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 360
            DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK
Sbjct: 1053 DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 1112

Query: 361  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSV 396
            IEAVTGWTRPSTVSEVRSFLGLAGYY RFVENFS+
Sbjct: 1113 IEAVTGWTRPSTVSEVRSFLGLAGYYGRFVENFSL 1147

[Close]

BLAST of Cmc04g0097501 vs. ExPASy TrEMBL
Match: A0A5A7VIT9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003090 PE=4 SV=1)

HSP 1 Score: 781.9 bits (2018), Expect = 1.2e-222
Identity = 392/394 (99.49%), Postives = 393/394 (99.75%), Query Frame = 0


Query: 1   MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
           MLSKEKVKACQIEI GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTF+PPS
Sbjct: 1   MLSKEKVKACQIEIVGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFHPPS 60

Query: 61  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
           MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV
Sbjct: 61  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120

Query: 121 FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
           FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 121 FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180

Query: 181 PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
           PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 181 PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240

Query: 241 YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 300
           YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
Sbjct: 241 YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 300

Query: 301 DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 360
           DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK
Sbjct: 301 DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 360

Query: 361 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 395
           IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS
Sbjct: 361 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 394

[Close]

BLAST of Cmc04g0097501 vs. ExPASy TrEMBL
Match: A0A5A7T9B7 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00730 PE=4 SV=1)

HSP 1 Score: 780.0 bits (2013), Expect = 4.6e-222
Identity = 390/394 (98.98%), Postives = 393/394 (99.75%), Query Frame = 0


Query: 1   MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
           MLSKEKVKACQIEI+GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS
Sbjct: 401 MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 460

Query: 61  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
           MASFKFKGGGSKSLPQVISAIRASKLLSQGTW ILASVVDTREADVSLSSEPVVRDYPDV
Sbjct: 461 MASFKFKGGGSKSLPQVISAIRASKLLSQGTWAILASVVDTREADVSLSSEPVVRDYPDV 520

Query: 121 FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
           FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 521 FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 580

Query: 181 PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
           PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 581 PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 640

Query: 241 YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 300
           YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID
Sbjct: 641 YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 700

Query: 301 DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 360
           DILIYSKTEAEH+EHLRMVLQTLRDNKLY+KFSKCEFWLKQVSFLGHVVSKAGVSVDPAK
Sbjct: 701 DILIYSKTEAEHKEHLRMVLQTLRDNKLYSKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 760

Query: 361 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 395
           IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS
Sbjct: 761 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFS 794

[Close]

BLAST of Cmc04g0097501 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-18
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 315 HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPST 374
           HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 375 VSEVRSFLGLAGYYRRFVENF 394
            +E+R FLGL GYYRRFV+N+
Sbjct: 63  TTELRGFLGLTGYYRRFVKNY 83

The following BLAST results are available for this feature:

BLAST of Cmc04g0097501 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01613.1	3.0e-223	99.75	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037291.1	8.6e-223	99.49	pol protein [Cucumis melo var. makuwa]	[more]
KAA0043391.1	1.5e-222	99.24	pol protein [Cucumis melo var. makuwa]	[more]
KAA0066266.1	2.5e-222	99.49	pol protein [Cucumis melo var. makuwa]	[more]
KAA0038231.1	9.6e-222	98.98	gag protease polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0097501 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	1.5e-55	39.76	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q99315	2.5e-55	40.57	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	2.5e-55	40.57	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P04323	6.1e-54	40.73	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P0CT41	7.5e-52	37.50	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Cmc04g0097501 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPI1	1.4e-223	99.75	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7T6R9	4.2e-223	99.49	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3G...	[more]
A0A5A7TP96	7.1e-223	99.24	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold58...	[more]
A0A5A7VIT9	1.2e-222	99.49	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21...	[more]
A0A5A7T9B7	4.6e-222	98.98	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Cmc04g0097501 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.5e-18	51.85	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 189..348 e-value: 1.1E-29 score: 103.5
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 170..349 score: 11.499489
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 214..349 e-value: 1.4E-95 score: 320.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 359..395 e-value: 1.4E-11 score: 46.2
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 2..65 e-value: 1.0E-13 score: 53.1
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 135..274 e-value: 1.4E-95 score: 320.6
None	No IPR available	PFAM	PF08284	RVP_2	coord: 4..58 e-value: 1.2E-16 score: 60.8
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 146..392
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 146..392
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 1..41 e-value: 1.78891E-8 score: 49.6424
None	No IPR available	CDD	cd01647	RT_LTR	coord: 173..349 e-value: 4.39149E-100 score: 292.962
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 113..394

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0097501.1	Cmc04g0097501.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding