Cmc04g0096201 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0096201
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic
Location	CMiso1.1chr04: 10351727 .. 10352266 (+)
RNA-Seq Expression	Cmc04g0096201
Synteny	Cmc04g0096201

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTCCATCGAGTTTTCCTTACTTGATCGAACAACCCAAACTTCAGTTATTTCAACTACATCAAATGATCTTTCAAATTGGTCAAGACTCTCCAGTTTATGGCCGCTTCTCTATGGTACTAGTTGTTGCTTCATTGAATTCGCTTCATTAATAGGTTCACGATTCGACTTTGATCGTTATGGACTGGTACCAAGATCTAGTTCTAGACAGGCAGACTTAATTTTAACAGCGGGTACGGTAACAATGAAAATGGCTCCTTCTTTAGTAAGATTATATGAGCAAATGCCTGAACCAAAATATGTTATTGTTATGGGAGCATGTACAATTACAGGAGGGATGTTTAGTACCGATTCTTATAGTACTGTTCGGGGAGTCGATAAGTTAATTCCTGTCGATGTGTATTTGCCGGGTTGTCCGCCTAAACCCGAGGCTGTTATAGATGCTATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAAAATCGAAACTCATGTAAATTGGTCTAA

mRNA sequence

ATGAATTCCATCGAGTTTTCCTTACTTGATCGAACAACCCAAACTTCAGTTATTTCAACTACATCAAATGATCTTTCAAATTGGTCAAGACTCTCCAGTTTATGGCCGCTTCTCTATGGTACTAGTTGTTGCTTCATTGAATTCGCTTCATTAATAGGTTCACGATTCGACTTTGATCGTTATGGACTGGTACCAAGATCTAGTTCTAGACAGGCAGACTTAATTTTAACAGCGGGTACGGTAACAATGAAAATGGCTCCTTCTTTAGTAAGATTATATGAGCAAATGCCTGAACCAAAATATGTTATTGTTATGGGAGCATGTACAATTACAGGAGGGATGTTTAGTACCGATTCTTATAGTACTGTTCGGGGAGTCGATAAGTTAATTCCTGTCGATGTGTATTTGCCGGGTTGTCCGCCTAAACCCGAGGCTGTTATAGATGCTATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAAAATCGAAACTCATGTAAATTGGTCTAA

Coding sequence (CDS)

ATGAATTCCATCGAGTTTTCCTTACTTGATCGAACAACCCAAACTTCAGTTATTTCAACTACATCAAATGATCTTTCAAATTGGTCAAGACTCTCCAGTTTATGGCCGCTTCTCTATGGTACTAGTTGTTGCTTCATTGAATTCGCTTCATTAATAGGTTCACGATTCGACTTTGATCGTTATGGACTGGTACCAAGATCTAGTTCTAGACAGGCAGACTTAATTTTAACAGCGGGTACGGTAACAATGAAAATGGCTCCTTCTTTAGTAAGATTATATGAGCAAATGCCTGAACCAAAATATGTTATTGTTATGGGAGCATGTACAATTACAGGAGGGATGTTTAGTACCGATTCTTATAGTACTGTTCGGGGAGTCGATAAGTTAATTCCTGTCGATGTGTATTTGCCGGGTTGTCCGCCTAAACCCGAGGCTGTTATAGATGCTATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAAAATCGAAACTCATGTAAATTGGTCTAA

Protein sequence

MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENRNSCKLV

Homology

[Close]

BLAST of Cmc04g0096201 vs. NCBI nr
Match: YP_009945421.1 (NADH-plastoquinone oxidoreductase subunit K [Sechium edule] >QOE55951.1 NADH-plastoquinone oxidoreductase subunit K [Sechium edule])

HSP 1 Score: 337.0 bits (863), Expect = 9.7e-89
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60
           MNSIEF LLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSY 120
           YGLVPRSS RQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVI MGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 174
           STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR
Sbjct: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

[Close]

BLAST of Cmc04g0096201 vs. NCBI nr
Match: QIT04137.1 (NADH dehydrogenase subunit K [Sechium edule])

HSP 1 Score: 337.0 bits (863), Expect = 9.7e-89
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60
           MNSIEF LLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSY 120
           YGLVPRSS RQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVI MGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 174
           STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR
Sbjct: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

[Close]

BLAST of Cmc04g0096201 vs. NCBI nr
Match: YP_009430631.1 (NADH dehydrogenase subunit K [Gynostemma cardiospermum] >YP_009439808.1 NADH dehydrogenase subunit K [Gynostemma laxiflorum] >YP_010015143.1 NADH dehydrogenase subunit K [Gynostemma yixingense] >ART65086.1 NADH dehydrogenase subunit K [Gynostemma cardiospermum] >ATG86666.1 NADH dehydrogenase subunit K [Gynostemma laxiflorum] >QOI14268.1 NADH dehydrogenase subunit K [Gynostemma yixingense])

HSP 1 Score: 337.0 bits (863), Expect = 9.7e-89
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60
           MNSIEF LLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSY 120
           YGLVPRSS RQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVI MGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 174
           STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR
Sbjct: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

[Close]

BLAST of Cmc04g0096201 vs. NCBI nr
Match: YP_009004048.1 (NADH-plastoquinone oxidoreductase subunit K [Cucumis hystrix] >YP_247603.1 NADH dehydrogenase subunit K [Cucumis sativus] >Q4VZH1.1 RecName: Full=NAD(P)H-quinone oxidoreductase subunit K, chloroplastic; AltName: Full=NAD(P)H dehydrogenase subunit K; AltName: Full=NADH-plastoquinone oxidoreductase subunit K [Cucumis sativus] >ALF03305.1 NADH dehydrogenase subunit K [Cucumis sativus var. hardwickii] >AVE15335.1 NdhK [Cucumis sativus var. sativus] >AAZ94655.1 NADH dehydrogenase 32 kDa subunit [Cucumis sativus] >ABI97421.1 NADH-plastoquinone oxidoreductase subunit K [Cucumis sativus] >AHJ61390.1 NADH-plastoquinone oxidoreductase subunit K [Cucumis hystrix])

HSP 1 Score: 337.0 bits (863), Expect = 9.7e-89
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60
           MNSIEF LLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSY 120
           YGLVPRSS RQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVI MGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 174
           STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR
Sbjct: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

[Close]

BLAST of Cmc04g0096201 vs. NCBI nr
Match: ASY96345.1 (NADH dehydrogenase subunit K [Cucumis melo subsp. agrestis])

HSP 1 Score: 337.0 bits (863), Expect = 9.7e-89
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60
           MNSIEF LLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSY 120
           YGLVPRSS RQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVI MGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 174
           STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR
Sbjct: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

[Close]

BLAST of Cmc04g0096201 vs. ExPASy Swiss-Prot
Match: Q4VZH1 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhK PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.3e-91
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60
           MNSIEF LLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSY 120
           YGLVPRSS RQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVI MGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 174
           STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR
Sbjct: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

[Close]

BLAST of Cmc04g0096201 vs. ExPASy Swiss-Prot
Match: Q0ZJ16 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhK PE=3 SV=2)

HSP 1 Score: 332.8 bits (852), Expect = 2.4e-90
Identity = 167/173 (96.53%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60
           MNSIEF LLDRTTQ SVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSY 120
           YGLVPRSS RQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVI MGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 174
           STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRI+SQ+ENR
Sbjct: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIRSQQENR 173

[Close]

BLAST of Cmc04g0096201 vs. ExPASy Swiss-Prot
Match: Q0G9V8 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Daucus carota OX=4039 GN=ndhK PE=3 SV=2)

HSP 1 Score: 331.6 bits (849), Expect = 5.3e-90
Identity = 167/173 (96.53%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60
           MNSIEF LLDRTTQ SVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSY 120
           YGLVPRSS RQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVI MGACTI+GGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTISGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 174
           STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQ ENR
Sbjct: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQRENR 173

[Close]

BLAST of Cmc04g0096201 vs. ExPASy Swiss-Prot
Match: Q68S02 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Panax ginseng OX=4054 GN=ndhK PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 5.3e-90
Identity = 167/173 (96.53%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60
           MNSIEF LLDRTTQ SVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSY 120
           YGLVPRSS RQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVI MGACTI+GGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTISGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 174
           STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQ ENR
Sbjct: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQRENR 173

[Close]

BLAST of Cmc04g0096201 vs. ExPASy Swiss-Prot
Match: Q06GZ3 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Drimys granadensis OX=224735 GN=ndhK PE=3 SV=2)

HSP 1 Score: 330.9 bits (847), Expect = 9.1e-90
Identity = 166/173 (95.95%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60
           MNSIEF LLDRTTQ SVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSY 120
           YGLVPRSS RQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVI MGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 174
           STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKK+SREIYEDRI SQ+ENR
Sbjct: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKVSREIYEDRIGSQQENR 173

[Close]

BLAST of Cmc04g0096201 vs. ExPASy TrEMBL
Match: A0A218KG48 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=ndhK PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 4.7e-89
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60
           MNSIEF LLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSY 120
           YGLVPRSS RQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVI MGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 174
           STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR
Sbjct: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

[Close]

BLAST of Cmc04g0096201 vs. ExPASy TrEMBL
Match: A0A410HF89 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=ndhK PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 4.7e-89
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60
           MNSIEF LLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSY 120
           YGLVPRSS RQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVI MGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 174
           STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR
Sbjct: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

[Close]

BLAST of Cmc04g0096201 vs. ExPASy TrEMBL
Match: A0A1X9Q1M2 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhK PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 4.7e-89
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60
           MNSIEF LLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSY 120
           YGLVPRSS RQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVI MGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 174
           STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR
Sbjct: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

[Close]

BLAST of Cmc04g0096201 vs. ExPASy TrEMBL
Match: A0A1S4EU13 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis melo OX=3656 GN=ndhK PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 4.7e-89
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60
           MNSIEF LLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSY 120
           YGLVPRSS RQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVI MGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 174
           STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR
Sbjct: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

[Close]

BLAST of Cmc04g0096201 vs. ExPASy TrEMBL
Match: A0A249RZA1 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=ndhK PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 4.7e-89
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60
           MNSIEF LLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSY 120
           YGLVPRSS RQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVI MGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 174
           STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR
Sbjct: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 173

[Close]

BLAST of Cmc04g0096201 vs. TAIR 10
Match: ATCG00430.1 (photosystem II reaction center protein G )

HSP 1 Score: 319.3 bits (817), Expect = 1.9e-87
Identity = 159/173 (91.91%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MNSIEFSLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60
           MNSI+F +LDRTT+ SVISTT NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIKFPILDRTTKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSSRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSY 120
           YGLVPRSS RQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVI MGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQEENR 174
           STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKI+REIY+DRI+ Q+ NR
Sbjct: 121 STVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKIAREIYKDRIRPQQGNR 173

[Close]

BLAST of Cmc04g0096201 vs. TAIR 10
Match: AT5G11770.1 (NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial )

HSP 1 Score: 156.0 bits (393), Expect = 2.9e-38
Identity = 67/137 (48.91%), Postives = 102/137 (74.45%), Query Frame = 0


Query: 23  NDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSSRQADLILTAGTVT 82
           +DL NW+R  S+WP+ +G +CC +E      +R+D DR+G++ R S RQ+D ++ AGT+T
Sbjct: 73  DDLMNWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLT 132

Query: 83  MKMAPSLVRLYEQMPEPKYVIVMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPK 142
            KMAP+L ++Y+QMPEP++VI MG+C   GG +   SYS VRG D+++PVD+Y+PGCPP 
Sbjct: 133 NKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHY-SYSVVRGCDRIVPVDIYVPGCPPT 192

Query: 143 PEAVIDAITKLRKKISR 160
            EA++  + +L+KKI+R
Sbjct: 193 AEALLYGLLQLQKKINR 208

The following BLAST results are available for this feature:

BLAST of Cmc04g0096201 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009945421.1	9.7e-89	98.27	NADH-plastoquinone oxidoreductase subunit K [Sechium edule] >QOE55951.1 NADH-pla...	[more]
QIT04137.1	9.7e-89	98.27	NADH dehydrogenase subunit K [Sechium edule]	[more]
YP_009430631.1	9.7e-89	98.27	NADH dehydrogenase subunit K [Gynostemma cardiospermum] >YP_009439808.1 NADH deh...	[more]
YP_009004048.1	9.7e-89	98.27	NADH-plastoquinone oxidoreductase subunit K [Cucumis hystrix] >YP_247603.1 NADH ...	[more]
ASY96345.1	9.7e-89	98.27	NADH dehydrogenase subunit K [Cucumis melo subsp. agrestis]	[more]

BLAST of Cmc04g0096201 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZH1	1.3e-91	98.27	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q0ZJ16	2.4e-90	96.53	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Vitis vinifera OX=297...	[more]
Q0G9V8	5.3e-90	96.53	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Daucus carota OX=4039...	[more]
Q68S02	5.3e-90	96.53	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Panax ginseng OX=4054...	[more]
Q06GZ3	9.1e-90	95.95	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Drimys granadensis OX...	[more]

BLAST of Cmc04g0096201 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A218KG48	4.7e-89	98.27	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus var. ...	[more]
A0A410HF89	4.7e-89	98.27	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Trichosanthes kirilow...	[more]
A0A1X9Q1M2	4.7e-89	98.27	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=36...	[more]
A0A1S4EU13	4.7e-89	98.27	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A249RZA1	4.7e-89	98.27	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis melo var. can...	[more]

BLAST of Cmc04g0096201 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00430.1	1.9e-87	91.91	photosystem II reaction center protein G	[more]
AT5G11770.1	2.9e-38	48.91	NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006137	NADH:ubiquinone oxidoreductase-like, 20kDa subunit	PFAM	PF01058	Oxidored_q6	coord: 67..153 e-value: 1.1E-21 score: 77.1
None	No IPR available	GENE3D	3.40.50.12280		coord: 4..177 e-value: 8.0E-67 score: 225.8
None	No IPR available	PANTHER	PTHR11995	NADH DEHYDROGENASE	coord: 3..174
None	No IPR available	PANTHER	PTHR11995:SF14	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIAL	coord: 3..174
None	No IPR available	SUPERFAMILY	56770	HydA/Nqo6-like	coord: 16..166
IPR006138	NADH-ubiquinone oxidoreductase, 20 Kd subunit	TIGRFAM	TIGR01957	TIGR01957	coord: 17..159 e-value: 2.2E-63 score: 210.5
IPR006138	NADH-ubiquinone oxidoreductase, 20 Kd subunit	PROSITE	PS01150	COMPLEX1_20K	coord: 125..141
IPR006138	NADH-ubiquinone oxidoreductase, 20 Kd subunit	HAMAP	MF_01356	NDH1_NuoB	coord: 7..158 score: 38.103836

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0096201.1	Cmc04g0096201.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0051536	iron-sulfur cluster binding