Cmc04g0096111 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0096111
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTransposase
LocationCMiso1.1chr04: 10151609 .. 10152160 (+)
RNA-Seq ExpressionCmc04g0096111
SyntenyCmc04g0096111
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAGCTAAGTTAGAGGCTTTCATAGGGTCTGCAACACATTATCATATCCCTATCACATATATGTCTTGGAAAAGTATGCGTGCAGAACTGAAATATAAGATATTCACTACAATTGAGGTATATATAATTTTAATGTGCTTATATTGGTATTGTTCTTGTTGTATGGACACTTGACTAAATACTTTTAATTATTTAGGCTGCATTCGTCATTCATCCAAGATCTAGGAAAAACATTCTCCAAACTGCATGTATTTCGTTTCATCAATTTAAGAACTGGCTAACAACGAAATACATCATGCCGCATAAAGATGAGCCACAACTACTTCAAGTTCCACAAGAAAAGTATCACTTCATTCAGCAAAATCATTGGGAAGAGTTTGTAAGGTCAAGGTTATGCGGGACCTTTCAGATATGAGTAACTTTTATACACCAGAATCATTTGAGAGAATATTTGTTACTTTCTCATTAACAAATACATTTAGATAAAGGAAAAAAGACAATTGCAACAAGATAGACGATTGAAGAACAAATAAAATCATAGAATCTCAAGG

mRNA sequence

TGGAGCTAAGTTAGAGGCTTTCATAGGGTCTGCAACACATTATCATATCCCTATCACATATATGTCTTGGAAAAGTATGCGTGCAGAACTGAAATATAAGATATTCACTACAATTGAGGCTGCATTCGTCATTCATCCAAGATCTAGGAAAAACATTCTCCAAACTGCATGTATTTCGTTTCATCAATTTAAGAACTGGCTAACAACGAAATACATCATGCCGCATAAAGATGAGCCACAACTACTTCAAGTTCCACAAGAAAAGTATCACTTCATTCAGCAAAATCATTGGGAAGAGTTTGTAAGGTCAAGGTTATGCGGGACCTTTCAGATATGAGTAACTTTTATACACCAGAATCATTTGAGAGAATATTTGTTACTTTCTCATTAACAAATACATTTAGATAAAGGAAAAAAGACAATTGCAACAAGATAGACGATTGAAGAACAAATAAAATCATAGAATCTCAAGG

Coding sequence (CDS)

ATGTCTTGGAAAAGTATGCGTGCAGAACTGAAATATAAGATATTCACTACAATTGAGGCTGCATTCGTCATTCATCCAAGATCTAGGAAAAACATTCTCCAAACTGCATGTATTTCGTTTCATCAATTTAAGAACTGGCTAACAACGAAATACATCATGCCGCATAAAGATGAGCCACAACTACTTCAAGTTCCACAAGAAAAGTATCACTTCATTCAGCAAAATCATTGGGAAGAGTTTGTAAGGTCAAGGTTATGCGGGACCTTTCAGATATGA

Protein sequence

MSWKSMRAELKYKIFTTIEAAFVIHPRSRKNILQTACISFHQFKNWLTTKYIMPHKDEPQLLQVPQEKYHFIQQNHWEEFVRSRLCGTFQI
Homology
[Close]
BLAST of Cmc04g0096111 vs. NCBI nr
Match: TYK09719.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 161.0 bits (406), Expect = 4.8e-36
Identity = 78/89 (87.64%), Postives = 81/89 (91.01%), Query Frame = 0 

Query: 2   SWKSMRAELKYKIFTTIEAAFVIHPRSRKNILQTACISFHQFKNWLTTKYIMPHKDEPQL 61
           SWKS+ AELK KIFTT+EAAFVI PRSRKNILQTA ISFHQFKNWLTTKYIMPHKDEPQL
Sbjct: 74  SWKSVPAELKDKIFTTVEAAFVIDPRSRKNILQTADISFHQFKNWLTTKYIMPHKDEPQL 133

Query: 62  LQVPQEKYHFIQQNHWEEFVRSRLCGTFQ 91
           LQV  EKY FI+QNHWEEFVRSRLC TFQ
Sbjct: 134 LQVLPEKYSFIKQNHWEEFVRSRLCETFQ 162

[Close]
BLAST of Cmc04g0096111 vs. NCBI nr
Match: KAA0043643.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 161.0 bits (406), Expect = 4.8e-36
Identity = 78/89 (87.64%), Postives = 81/89 (91.01%), Query Frame = 0 

Query: 2   SWKSMRAELKYKIFTTIEAAFVIHPRSRKNILQTACISFHQFKNWLTTKYIMPHKDEPQL 61
           SWKS+ AELK KIFTT+EAAFVI PRSRKNILQTA ISFHQFKNWLTTKYIMPHKDEPQL
Sbjct: 206 SWKSVPAELKDKIFTTVEAAFVIDPRSRKNILQTADISFHQFKNWLTTKYIMPHKDEPQL 265

Query: 62  LQVPQEKYHFIQQNHWEEFVRSRLCGTFQ 91
           LQV  EKY FI+QNHWEEFVRSRLC TFQ
Sbjct: 266 LQVLPEKYSFIKQNHWEEFVRSRLCETFQ 294

[Close]
BLAST of Cmc04g0096111 vs. NCBI nr
Match: KAA0060131.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 161.0 bits (406), Expect = 4.8e-36
Identity = 77/90 (85.56%), Postives = 82/90 (91.11%), Query Frame = 0 

Query: 1   MSWKSMRAELKYKIFTTIEAAFVIHPRSRKNILQTACISFHQFKNWLTTKYIMPHKDEPQ 60
           MSWKS+RAELK KIFTT+EAAFVI PRSRKN+LQTA ISF QFKNWLTTKYI+PHKDEPQ
Sbjct: 81  MSWKSVRAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQ 140

Query: 61  LLQVPQEKYHFIQQNHWEEFVRSRLCGTFQ 91
           LLQVP EKY FI+QNHWEEFVRSRL  TFQ
Sbjct: 141 LLQVPPEKYSFIEQNHWEEFVRSRLSETFQ 170

[Close]
BLAST of Cmc04g0096111 vs. NCBI nr
Match: KAA0055587.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 77/90 (85.56%), Postives = 81/90 (90.00%), Query Frame = 0 

Query: 1   MSWKSMRAELKYKIFTTIEAAFVIHPRSRKNILQTACISFHQFKNWLTTKYIMPHKDEPQ 60
           MSWKSM AELK KIFTT+EAAFVI PRSRKN+LQTA ISF QFKNWLTTKYI+PHKDEPQ
Sbjct: 81  MSWKSMPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQ 140

Query: 61  LLQVPQEKYHFIQQNHWEEFVRSRLCGTFQ 91
           LLQVP EKY FI+QNHWEEFVRSRL  TFQ
Sbjct: 141 LLQVPPEKYSFIEQNHWEEFVRSRLSETFQ 170

[Close]
BLAST of Cmc04g0096111 vs. NCBI nr
Match: TYK30266.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 77/90 (85.56%), Postives = 81/90 (90.00%), Query Frame = 0 

Query: 1   MSWKSMRAELKYKIFTTIEAAFVIHPRSRKNILQTACISFHQFKNWLTTKYIMPHKDEPQ 60
           MSWKSM AELK KIFTT+EAAFVI PRSRKN+LQTA ISF QFKNWLTTKYI+PHKDEPQ
Sbjct: 81  MSWKSMPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQ 140

Query: 61  LLQVPQEKYHFIQQNHWEEFVRSRLCGTFQ 91
           LLQVP EKY FI+QNHWEEFVRSRL  TFQ
Sbjct: 141 LLQVPPEKYSFIEQNHWEEFVRSRLSETFQ 170

[Close]
BLAST of Cmc04g0096111 vs. ExPASy TrEMBL
Match: A0A5A7V2Z2 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00510 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.3e-36
Identity = 77/90 (85.56%), Postives = 82/90 (91.11%), Query Frame = 0 

Query: 1   MSWKSMRAELKYKIFTTIEAAFVIHPRSRKNILQTACISFHQFKNWLTTKYIMPHKDEPQ 60
           MSWKS+RAELK KIFTT+EAAFVI PRSRKN+LQTA ISF QFKNWLTTKYI+PHKDEPQ
Sbjct: 81  MSWKSVRAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQ 140

Query: 61  LLQVPQEKYHFIQQNHWEEFVRSRLCGTFQ 91
           LLQVP EKY FI+QNHWEEFVRSRL  TFQ
Sbjct: 141 LLQVPPEKYSFIEQNHWEEFVRSRLSETFQ 170

[Close]
BLAST of Cmc04g0096111 vs. ExPASy TrEMBL
Match: A0A5A7TJM6 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G00890 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.3e-36
Identity = 78/89 (87.64%), Postives = 81/89 (91.01%), Query Frame = 0 

Query: 2   SWKSMRAELKYKIFTTIEAAFVIHPRSRKNILQTACISFHQFKNWLTTKYIMPHKDEPQL 61
           SWKS+ AELK KIFTT+EAAFVI PRSRKNILQTA ISFHQFKNWLTTKYIMPHKDEPQL
Sbjct: 206 SWKSVPAELKDKIFTTVEAAFVIDPRSRKNILQTADISFHQFKNWLTTKYIMPHKDEPQL 265

Query: 62  LQVPQEKYHFIQQNHWEEFVRSRLCGTFQ 91
           LQV  EKY FI+QNHWEEFVRSRLC TFQ
Sbjct: 266 LQVLPEKYSFIKQNHWEEFVRSRLCETFQ 294

[Close]
BLAST of Cmc04g0096111 vs. ExPASy TrEMBL
Match: A0A5D3CHH4 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001360 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.3e-36
Identity = 78/89 (87.64%), Postives = 81/89 (91.01%), Query Frame = 0 

Query: 2   SWKSMRAELKYKIFTTIEAAFVIHPRSRKNILQTACISFHQFKNWLTTKYIMPHKDEPQL 61
           SWKS+ AELK KIFTT+EAAFVI PRSRKNILQTA ISFHQFKNWLTTKYIMPHKDEPQL
Sbjct: 74  SWKSVPAELKDKIFTTVEAAFVIDPRSRKNILQTADISFHQFKNWLTTKYIMPHKDEPQL 133

Query: 62  LQVPQEKYHFIQQNHWEEFVRSRLCGTFQ 91
           LQV  EKY FI+QNHWEEFVRSRLC TFQ
Sbjct: 134 LQVLPEKYSFIKQNHWEEFVRSRLCETFQ 162

[Close]
BLAST of Cmc04g0096111 vs. ExPASy TrEMBL
Match: A0A5D3E302 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00200 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.2e-36
Identity = 77/90 (85.56%), Postives = 81/90 (90.00%), Query Frame = 0 

Query: 1   MSWKSMRAELKYKIFTTIEAAFVIHPRSRKNILQTACISFHQFKNWLTTKYIMPHKDEPQ 60
           MSWKSM AELK KIFTT+EAAFVI PRSRKN+LQTA ISF QFKNWLTTKYI+PHKDEPQ
Sbjct: 81  MSWKSMPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQ 140

Query: 61  LLQVPQEKYHFIQQNHWEEFVRSRLCGTFQ 91
           LLQVP EKY FI+QNHWEEFVRSRL  TFQ
Sbjct: 141 LLQVPPEKYSFIEQNHWEEFVRSRLSETFQ 170

[Close]
BLAST of Cmc04g0096111 vs. ExPASy TrEMBL
Match: A0A5A7ULY3 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00690 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.2e-36
Identity = 77/90 (85.56%), Postives = 81/90 (90.00%), Query Frame = 0 

Query: 1   MSWKSMRAELKYKIFTTIEAAFVIHPRSRKNILQTACISFHQFKNWLTTKYIMPHKDEPQ 60
           MSWKSM AELK KIFTT+EAAFVI PRSRKN+LQTA ISF QFKNWLTTKYI+PHKDEPQ
Sbjct: 81  MSWKSMPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQ 140

Query: 61  LLQVPQEKYHFIQQNHWEEFVRSRLCGTFQ 91
           LLQVP EKY FI+QNHWEEFVRSRL  TFQ
Sbjct: 141 LLQVPPEKYSFIEQNHWEEFVRSRLSETFQ 170

The following BLAST results are available for this feature:
BLAST of Cmc04g0096111 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK09719.14.8e-3687.64putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa][more]
KAA0043643.14.8e-3687.64putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa][more]
KAA0060131.14.8e-3685.56putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa][more]
KAA0055587.11.1e-3585.56putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa][more]
TYK30266.11.1e-3585.56putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa][more]
BLAST of Cmc04g0096111 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc04g0096111 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V2Z22.3e-3685.56Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... [more]
A0A5A7TJM62.3e-3687.64Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3CHH42.3e-3687.64Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3E3025.2e-3685.56Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... [more]
A0A5A7ULY35.2e-3685.56Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... [more]
BLAST of Cmc04g0096111 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0096111.1Cmc04g0096111.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0016301 kinase activity