Cmc04g0094171 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0094171
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr04: 6657315 .. 6659258 (-)
RNA-Seq Expression	Cmc04g0094171
Synteny	Cmc04g0094171

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCATTAAGAAGAAGGATGGATTGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCTGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGATGGAGACCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAAGCAGTCACCAGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGTAGGTTATTACCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGGTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAAGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTCAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCATAAAGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCAGACAGGCCCCATTGCATTGGGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTCCAGCCGACTTTGAGGCAAAGGATCATTGATTCTCAGGGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGATTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGAGAGAATTATTATCTGAGGCTCACAGTTTCCCGTTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCATAACATGAAGAGAGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCAGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAATGTGTCCATGGATTTCATTACAGGACTGCTGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTTTGGTGGACAGACTTACCAAATCAGCACACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTAG

mRNA sequence

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCATTAAGAAGAAGGATGGATTGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCTGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGATGGAGACCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAAGCAGTCACCAGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGTAGGTTATTACCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGGTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAAGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTCAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCATAAAGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCAGACAGGCCCCATTGCATTGGGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTCCAGCCGACTTTGAGGCAAAGGATCATTGATTCTCAGGGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGATTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGAGAGAATTATTATCTGAGGCTCACAGTTTCCCGTTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCATAACATGAAGAGAGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCAGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAATGTGTCCATGGATTTCATTACAGGACTGCTGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTTTGGTGGACAGACTTACCAAATCAGCACACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTAG

Coding sequence (CDS)

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCATTAAGAAGAAGGATGGATTGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCTGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGATGGAGACCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAAGCAGTCACCAGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGTAGGTTATTACCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGGTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAAGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTCAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCATAAAGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCAGACAGGCCCCATTGCATTGGGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTCCAGCCGACTTTGAGGCAAAGGATCATTGATTCTCAGGGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGATTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGAGAGAATTATTATCTGAGGCTCACAGTTTCCCGTTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCATAACATGAAGAGAGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCAGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAATGTGTCCATGGATTTCATTACAGGACTGCTGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTTTGGTGGACAGACTTACCAAATCAGCACACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTAG

Protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFIKKKDGLMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLLSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMETEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLVGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGQKIQIFTDHKSLKYFFTHKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHWDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDSQGNDPYLVEKRGLAEAGQAIEFSISSDGGLLFERRLCVPSDSAVKRELLSEAHSFPFSMHPGSTKMYQDLKRVYWWHNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLLRTLRGFTVIWVLVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF

Homology

[Close]

BLAST of Cmc04g0094171 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1260.4 bits (3260), Expect = 0.0e+00
Identity = 622/647 (96.14%), Postives = 631/647 (97.53%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFIKKKDGLMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF+KKKDG MRLCIDYRELNKVTVKNR
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLLSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDL SGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMETEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK E EHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLVGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGL GYYRRFVENF
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACED FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGQKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG+KIQIFTDHKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTHKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHW 420
            KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH 
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDSQGNDPYLVEKRGLAEAGQAIEFSISS 480
            DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIID+Q NDPYLVEKRGLAEAGQA+EFS+SS
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLLFERRLCVPSDSAVKRELLSEAHSFPFSMHPGSTKMYQDLKRVYWWHNMKREVAEF 540
            DGGLLFERRLCVPSDS VK ELLSEAHS PFSMHPGSTKMY+D+KRVYWW NMKREVAEF
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEF 1119

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLLRTLRGFTVIWVLVDRLT 600
            VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIWV+VDRLT
Sbjct: 1120 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1179

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1180 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1226

[Close]

BLAST of Cmc04g0094171 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1258.0 bits (3254), Expect = 0.0e+00
Identity = 622/647 (96.14%), Postives = 629/647 (97.22%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFIKKKDGLMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF+KKKDG MRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLLSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDL SGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMETEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK E EHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLVGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGL GYYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACED FQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGQKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG+KIQIFTDHKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYFFTHKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHW 420
            KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH 
Sbjct: 1194 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1253

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDSQGNDPYLVEKRGLAEAGQAIEFSISS 480
            DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIID+Q NDPYLVEKRGLAEAGQ  EFS+SS
Sbjct: 1254 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1313

Query: 481  DGGLLFERRLCVPSDSAVKRELLSEAHSFPFSMHPGSTKMYQDLKRVYWWHNMKREVAEF 540
            DGGLLFERRLCVPSDSAVK ELLSEAHS PFSMHPGSTKMYQDLKRVYWW NMKREVAEF
Sbjct: 1314 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1373

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLLRTLRGFTVIWVLVDRLT 600
            VS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIWV+VDRLT
Sbjct: 1374 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1433

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1434 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1480

[Close]

BLAST of Cmc04g0094171 vs. NCBI nr
Match: KAA0056702.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1254.6 bits (3245), Expect = 0.0e+00
Identity = 620/647 (95.83%), Postives = 630/647 (97.37%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFIKKKDGLMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQ+LLDKGFIRPSVSPWGAPVLF+KKKDG MRLCIDYRELNKVTVKNR
Sbjct: 94  MAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 153

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLLSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDL SGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 154 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 213

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMETEHEEHLRIVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK E EHEEHLR+VLQTLRDNKLYA+FS
Sbjct: 214 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYARFS 273

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLVGYYRRFVENF 240
           K EFWLKQVSFLGHVVSKAGVSVDPAKIEAV  WTRPSTVSEVRSFLGLVGYYRRFVENF
Sbjct: 274 KYEFWLKQVSFLGHVVSKAGVSVDPAKIEAVIGWTRPSTVSEVRSFLGLVGYYRRFVENF 333

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACED FQNLKQKLVTAPV+TVPDGSGSFVIYSDASKKGL
Sbjct: 334 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVITVPDGSGSFVIYSDASKKGL 393

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGQKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG+KIQIFTDHKSL
Sbjct: 394 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 453

Query: 361 KYFFTHKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHW 420
           KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH 
Sbjct: 454 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 513

Query: 421 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDSQGNDPYLVEKRGLAEAGQAIEFSISS 480
           DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIID+Q NDPYLVEKRGLAEAGQA+EFS+SS
Sbjct: 514 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 573

Query: 481 DGGLLFERRLCVPSDSAVKRELLSEAHSFPFSMHPGSTKMYQDLKRVYWWHNMKREVAEF 540
           DGGLLFER LCVPSDSAVK ELLSEAHS PFSMHPGSTKMYQDLKRVYWW NMKREVAEF
Sbjct: 574 DGGLLFERCLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 633

Query: 541 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLLRTLRGFTVIWVLVDRLT 600
           VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIW +VDRLT
Sbjct: 634 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWAVVDRLT 693

Query: 601 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
           KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 694 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 740

[Close]

BLAST of Cmc04g0094171 vs. NCBI nr
Match: KAA0045479.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1253.4 bits (3242), Expect = 0.0e+00
Identity = 618/647 (95.52%), Postives = 629/647 (97.22%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFIKKKDGLMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF+KKKDG MRLCI+YRELNKVTVKNR
Sbjct: 122 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIEYRELNKVTVKNR 181

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLLSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFS+IDL SGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 182 YPLPRIDDLFDQLQGATVFSRIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 241

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMETEHEEHLRIVLQTLRDNKLYAKFS 180
           NAPA FMDLMNRVFREFLDTFVIVFIDDILIYSK E EHE+HLR+VLQTLRDNKLYAKFS
Sbjct: 242 NAPAEFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFS 301

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLVGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGL GYYRRFVENF
Sbjct: 302 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 361

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACED FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 362 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 421

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGQKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG+KIQIFTDHKSL
Sbjct: 422 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 481

Query: 361 KYFFTHKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHW 420
           KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH 
Sbjct: 482 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 541

Query: 421 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDSQGNDPYLVEKRGLAEAGQAIEFSISS 480
           DLER EIAVSVGAVTMQLAQLTVQPTLRQRIID+Q NDPYLVEKRGLAEAGQA+EFS+SS
Sbjct: 542 DLERTEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 601

Query: 481 DGGLLFERRLCVPSDSAVKRELLSEAHSFPFSMHPGSTKMYQDLKRVYWWHNMKREVAEF 540
           DGGLLFERRLCVPSDSAVK ELLSEAH  PFSMHPGSTKMYQDLKRVYWW NMKREVAEF
Sbjct: 602 DGGLLFERRLCVPSDSAVKTELLSEAHGSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 661

Query: 541 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLLRTLRGFTVIWVLVDRLT 600
           VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIWV+VDRLT
Sbjct: 662 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 721

Query: 601 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
           KSAHFVPGKSTYTAS+WAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 722 KSAHFVPGKSTYTASEWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 768

[Close]

BLAST of Cmc04g0094171 vs. NCBI nr
Match: KAA0062112.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1253.0 bits (3241), Expect = 0.0e+00
Identity = 620/647 (95.83%), Postives = 628/647 (97.06%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFIKKKDGLMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSP GAPVLF+KKKDG MRLCIDYRELNKVTVKNR
Sbjct: 656  MAPAELKELKVQLQELLDKGFIRPSVSPSGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 715

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLLSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDL SGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 716  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 775

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMETEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK E EHE HLR+VLQTLRDNKLYAKFS
Sbjct: 776  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHENHLRMVLQTLRDNKLYAKFS 835

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLVGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSK GVSVDPAKIEAVT WTRPSTVSEVRSFLGL GYYRRFVENF
Sbjct: 836  KCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 895

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACED FQNLKQKLVTAPVLTVPDGSGSFVIYSD SKKGL
Sbjct: 896  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKGL 955

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGQKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG+KIQIFTDHKSL
Sbjct: 956  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1015

Query: 361  KYFFTHKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHW 420
            KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH 
Sbjct: 1016 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1075

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDSQGNDPYLVEKRGLAEAGQAIEFSISS 480
            DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIID+Q NDPYLVEKRGLAEAGQA+EFS+SS
Sbjct: 1076 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1135

Query: 481  DGGLLFERRLCVPSDSAVKRELLSEAHSFPFSMHPGSTKMYQDLKRVYWWHNMKREVAEF 540
            DGGLLFERRLCVPSDSAVK ELLSEAHS PFSMHPGSTKMYQDLKRVYWW NMKREVAEF
Sbjct: 1136 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1195

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLLRTLRGFTVIWVLVDRLT 600
            VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIWV+VDRLT
Sbjct: 1196 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1255

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
            KSAHFVPGKSTYT+SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1256 KSAHFVPGKSTYTSSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1302

[Close]

BLAST of Cmc04g0094171 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 2.9e-109
Identity = 220/657 (33.49%), Postives = 362/657 (55.10%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFIKKKDGLMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+F+ KK+G +R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLLSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++QG+T+F+K+DL S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMETEHEEHLRIVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLVGYYRRFVENF 240
            KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG V Y R+F+   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            S++  PL  L +K   + W+       +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--QKIQI 360
            G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    +  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTHKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAL 420
             TDH++L    T++    N R  RW   ++D++ EI Y PG AN +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHWDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDSQGNDPYLVEKRGLAEAG 480
            +    P+  D E   I          + Q+++    + +++    ND  L+    L    
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481  QAIEFSISSDGGLLFERR--LCVPSDSAVKRELLSEAHSFPFSMHPGSTKMYQDLKRVYW 540
            + +E +I    GLL   +  + +P+D+ + R ++ + H     +HPG   +   + R + 
Sbjct: 900  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541  WHNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLLRTLRGF 600
            W  +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT L  +  G+
Sbjct: 960  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1019

Query: 601  TVIWVLVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK 647
              ++V+VDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+
Sbjct: 1020 NALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058

[Close]

BLAST of Cmc04g0094171 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 2.9e-109
Identity = 220/657 (33.49%), Postives = 362/657 (55.10%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFIKKKDGLMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+F+ KK+G +R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLLSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++QG+T+F+K+DL S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMETEHEEHLRIVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLVGYYRRFVENF 240
            KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG V Y R+F+   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            S++  PL  L +K   + W+       +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--QKIQI 360
            G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    +  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTHKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAL 420
             TDH++L    T++    N R  RW   ++D++ EI Y PG AN +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHWDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDSQGNDPYLVEKRGLAEAG 480
            +    P+  D E   I          + Q+++    + +++    ND  L+    L    
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481  QAIEFSISSDGGLLFERR--LCVPSDSAVKRELLSEAHSFPFSMHPGSTKMYQDLKRVYW 540
            + +E +I    GLL   +  + +P+D+ + R ++ + H     +HPG   +   + R + 
Sbjct: 900  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541  WHNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLLRTLRGF 600
            W  +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT L  +  G+
Sbjct: 960  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1019

Query: 601  TVIWVLVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK 647
              ++V+VDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+
Sbjct: 1020 NALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058

[Close]

BLAST of Cmc04g0094171 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 2.9e-109
Identity = 220/657 (33.49%), Postives = 362/657 (55.10%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFIKKKDGLMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+F+ KK+G +R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLLSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++QG+T+F+K+DL S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMETEHEEHLRIVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLVGYYRRFVENF 240
            KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG V Y R+F+   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            S++  PL  L +K   + W+       +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--QKIQI 360
            G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    +  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTHKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAL 420
             TDH++L    T++    N R  RW   ++D++ EI Y PG AN +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHWDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDSQGNDPYLVEKRGLAEAG 480
            +    P+  D E   I          + Q+++    + +++    ND  L+    L    
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481  QAIEFSISSDGGLLFERR--LCVPSDSAVKRELLSEAHSFPFSMHPGSTKMYQDLKRVYW 540
            + +E +I    GLL   +  + +P+D+ + R ++ + H     +HPG   +   + R + 
Sbjct: 900  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541  WHNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLLRTLRGF 600
            W  +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT L  +  G+
Sbjct: 960  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1019

Query: 601  TVIWVLVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK 647
              ++V+VDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+
Sbjct: 1020 NALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058

[Close]

BLAST of Cmc04g0094171 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 2.9e-109
Identity = 220/657 (33.49%), Postives = 362/657 (55.10%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFIKKKDGLMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+F+ KK+G +R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLLSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++QG+T+F+K+DL S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMETEHEEHLRIVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLVGYYRRFVENF 240
            KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG V Y R+F+   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            S++  PL  L +K   + W+       +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--QKIQI 360
            G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    +  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTHKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAL 420
             TDH++L    T++    N R  RW   ++D++ EI Y PG AN +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHWDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDSQGNDPYLVEKRGLAEAG 480
            +    P+  D E   I          + Q+++    + +++    ND  L+    L    
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481  QAIEFSISSDGGLLFERR--LCVPSDSAVKRELLSEAHSFPFSMHPGSTKMYQDLKRVYW 540
            + +E +I    GLL   +  + +P+D+ + R ++ + H     +HPG   +   + R + 
Sbjct: 900  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541  WHNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLLRTLRGF 600
            W  +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT L  +  G+
Sbjct: 960  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1019

Query: 601  TVIWVLVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK 647
              ++V+VDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+
Sbjct: 1020 NALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058

[Close]

BLAST of Cmc04g0094171 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 2.9e-109
Identity = 220/657 (33.49%), Postives = 362/657 (55.10%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFIKKKDGLMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+F+ KK+G +R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLLSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++QG+T+F+K+DL S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMETEHEEHLRIVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLVGYYRRFVENF 240
            KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG V Y R+F+   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            S++  PL  L +K   + W+       +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--QKIQI 360
            G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    +  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTHKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAL 420
             TDH++L    T++    N R  RW   ++D++ EI Y PG AN +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHWDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDSQGNDPYLVEKRGLAEAG 480
            +    P+  D E   I          + Q+++    + +++    ND  L+    L    
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481  QAIEFSISSDGGLLFERR--LCVPSDSAVKRELLSEAHSFPFSMHPGSTKMYQDLKRVYW 540
            + +E +I    GLL   +  + +P+D+ + R ++ + H     +HPG   +   + R + 
Sbjct: 900  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541  WHNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLLRTLRGF 600
            W  +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT L  +  G+
Sbjct: 960  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1019

Query: 601  TVIWVLVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK 647
              ++V+VDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+
Sbjct: 1020 NALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058

[Close]

BLAST of Cmc04g0094171 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1260.4 bits (3260), Expect = 0.0e+00
Identity = 622/647 (96.14%), Postives = 631/647 (97.53%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFIKKKDGLMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF+KKKDG MRLCIDYRELNKVTVKNR
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLLSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDL SGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMETEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK E EHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLVGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGL GYYRRFVENF
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACED FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGQKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG+KIQIFTDHKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTHKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHW 420
            KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH 
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDSQGNDPYLVEKRGLAEAGQAIEFSISS 480
            DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIID+Q NDPYLVEKRGLAEAGQA+EFS+SS
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLLFERRLCVPSDSAVKRELLSEAHSFPFSMHPGSTKMYQDLKRVYWWHNMKREVAEF 540
            DGGLLFERRLCVPSDS VK ELLSEAHS PFSMHPGSTKMY+D+KRVYWW NMKREVAEF
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEF 1119

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLLRTLRGFTVIWVLVDRLT 600
            VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIWV+VDRLT
Sbjct: 1120 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1179

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1180 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1226

[Close]

BLAST of Cmc04g0094171 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 1258.0 bits (3254), Expect = 0.0e+00
Identity = 622/647 (96.14%), Postives = 629/647 (97.22%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFIKKKDGLMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF+KKKDG MRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLLSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDL SGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMETEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK E EHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLVGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGL GYYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACED FQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGQKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG+KIQIFTDHKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYFFTHKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHW 420
            KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH 
Sbjct: 1194 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1253

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDSQGNDPYLVEKRGLAEAGQAIEFSISS 480
            DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIID+Q NDPYLVEKRGLAEAGQ  EFS+SS
Sbjct: 1254 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1313

Query: 481  DGGLLFERRLCVPSDSAVKRELLSEAHSFPFSMHPGSTKMYQDLKRVYWWHNMKREVAEF 540
            DGGLLFERRLCVPSDSAVK ELLSEAHS PFSMHPGSTKMYQDLKRVYWW NMKREVAEF
Sbjct: 1314 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1373

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLLRTLRGFTVIWVLVDRLT 600
            VS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIWV+VDRLT
Sbjct: 1374 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1433

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1434 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1480

[Close]

BLAST of Cmc04g0094171 vs. ExPASy TrEMBL
Match: A0A5A7ULI8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00300 PE=4 SV=1)

HSP 1 Score: 1254.6 bits (3245), Expect = 0.0e+00
Identity = 620/647 (95.83%), Postives = 630/647 (97.37%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFIKKKDGLMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQ+LLDKGFIRPSVSPWGAPVLF+KKKDG MRLCIDYRELNKVTVKNR
Sbjct: 94  MAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 153

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLLSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDL SGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 154 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 213

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMETEHEEHLRIVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK E EHEEHLR+VLQTLRDNKLYA+FS
Sbjct: 214 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYARFS 273

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLVGYYRRFVENF 240
           K EFWLKQVSFLGHVVSKAGVSVDPAKIEAV  WTRPSTVSEVRSFLGLVGYYRRFVENF
Sbjct: 274 KYEFWLKQVSFLGHVVSKAGVSVDPAKIEAVIGWTRPSTVSEVRSFLGLVGYYRRFVENF 333

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACED FQNLKQKLVTAPV+TVPDGSGSFVIYSDASKKGL
Sbjct: 334 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVITVPDGSGSFVIYSDASKKGL 393

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGQKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG+KIQIFTDHKSL
Sbjct: 394 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 453

Query: 361 KYFFTHKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHW 420
           KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH 
Sbjct: 454 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 513

Query: 421 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDSQGNDPYLVEKRGLAEAGQAIEFSISS 480
           DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIID+Q NDPYLVEKRGLAEAGQA+EFS+SS
Sbjct: 514 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 573

Query: 481 DGGLLFERRLCVPSDSAVKRELLSEAHSFPFSMHPGSTKMYQDLKRVYWWHNMKREVAEF 540
           DGGLLFER LCVPSDSAVK ELLSEAHS PFSMHPGSTKMYQDLKRVYWW NMKREVAEF
Sbjct: 574 DGGLLFERCLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 633

Query: 541 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLLRTLRGFTVIWVLVDRLT 600
           VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIW +VDRLT
Sbjct: 634 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWAVVDRLT 693

Query: 601 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
           KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 694 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 740

[Close]

BLAST of Cmc04g0094171 vs. ExPASy TrEMBL
Match: A0A5A7TW75 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1202G00130 PE=4 SV=1)

HSP 1 Score: 1253.4 bits (3242), Expect = 0.0e+00
Identity = 618/647 (95.52%), Postives = 629/647 (97.22%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFIKKKDGLMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLF+KKKDG MRLCI+YRELNKVTVKNR
Sbjct: 122 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIEYRELNKVTVKNR 181

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLLSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFS+IDL SGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 182 YPLPRIDDLFDQLQGATVFSRIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 241

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMETEHEEHLRIVLQTLRDNKLYAKFS 180
           NAPA FMDLMNRVFREFLDTFVIVFIDDILIYSK E EHE+HLR+VLQTLRDNKLYAKFS
Sbjct: 242 NAPAEFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFS 301

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLVGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGL GYYRRFVENF
Sbjct: 302 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 361

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACED FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 362 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 421

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGQKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG+KIQIFTDHKSL
Sbjct: 422 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 481

Query: 361 KYFFTHKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHW 420
           KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH 
Sbjct: 482 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 541

Query: 421 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDSQGNDPYLVEKRGLAEAGQAIEFSISS 480
           DLER EIAVSVGAVTMQLAQLTVQPTLRQRIID+Q NDPYLVEKRGLAEAGQA+EFS+SS
Sbjct: 542 DLERTEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 601

Query: 481 DGGLLFERRLCVPSDSAVKRELLSEAHSFPFSMHPGSTKMYQDLKRVYWWHNMKREVAEF 540
           DGGLLFERRLCVPSDSAVK ELLSEAH  PFSMHPGSTKMYQDLKRVYWW NMKREVAEF
Sbjct: 602 DGGLLFERRLCVPSDSAVKTELLSEAHGSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 661

Query: 541 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLLRTLRGFTVIWVLVDRLT 600
           VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIWV+VDRLT
Sbjct: 662 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 721

Query: 601 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
           KSAHFVPGKSTYTAS+WAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 722 KSAHFVPGKSTYTASEWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 768

[Close]

BLAST of Cmc04g0094171 vs. ExPASy TrEMBL
Match: A0A5A7V1N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004680 PE=4 SV=1)

HSP 1 Score: 1253.0 bits (3241), Expect = 0.0e+00
Identity = 620/647 (95.83%), Postives = 628/647 (97.06%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFIKKKDGLMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSP GAPVLF+KKKDG MRLCIDYRELNKVTVKNR
Sbjct: 656  MAPAELKELKVQLQELLDKGFIRPSVSPSGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 715

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLLSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDL SGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 716  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 775

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKMETEHEEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSK E EHE HLR+VLQTLRDNKLYAKFS
Sbjct: 776  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHENHLRMVLQTLRDNKLYAKFS 835

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLVGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSK GVSVDPAKIEAVT WTRPSTVSEVRSFLGL GYYRRFVENF
Sbjct: 836  KCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 895

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACED FQNLKQKLVTAPVLTVPDGSGSFVIYSD SKKGL
Sbjct: 896  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKGL 955

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGQKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG+KIQIFTDHKSL
Sbjct: 956  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1015

Query: 361  KYFFTHKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHW 420
            KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH 
Sbjct: 1016 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1075

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDSQGNDPYLVEKRGLAEAGQAIEFSISS 480
            DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIID+Q NDPYLVEKRGLAEAGQA+EFS+SS
Sbjct: 1076 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1135

Query: 481  DGGLLFERRLCVPSDSAVKRELLSEAHSFPFSMHPGSTKMYQDLKRVYWWHNMKREVAEF 540
            DGGLLFERRLCVPSDSAVK ELLSEAHS PFSMHPGSTKMYQDLKRVYWW NMKREVAEF
Sbjct: 1136 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1195

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLLRTLRGFTVIWVLVDRLT 600
            VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL RTLRGFTVIWV+VDRLT
Sbjct: 1196 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1255

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
            KSAHFVPGKSTYT+SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1256 KSAHFVPGKSTYTSSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1302

[Close]

BLAST of Cmc04g0094171 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 3.1e-26
Identity = 58/131 (44.27%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 162 HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTSWTRPST 221
           HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+  W  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 VSEVRSFLGLVGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDRFQNLKQKLVTAPV 281
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++     F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 282 LTVPDGSGSFV 291
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc04g0094171 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048687.1	0.0e+00	96.14	pol protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	0.0e+00	96.14	pol protein [Cucumis melo var. makuwa]	[more]
KAA0056702.1	0.0e+00	95.83	pol protein [Cucumis melo var. makuwa]	[more]
KAA0045479.1	0.0e+00	95.52	pol protein [Cucumis melo var. makuwa]	[more]
KAA0062112.1	0.0e+00	95.83	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0094171 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	2.9e-109	33.49	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.9e-109	33.49	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.9e-109	33.49	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.9e-109	33.49	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	2.9e-109	33.49	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc04g0094171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U330	0.0e+00	96.14	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5D3BPI1	0.0e+00	96.14	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7ULI8	0.0e+00	95.83	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00300 PE=...	[more]
A0A5A7TW75	0.0e+00	95.52	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1202G00130 P...	[more]
A0A5A7V1N3	0.0e+00	95.83	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89...	[more]

BLAST of Cmc04g0094171 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	3.1e-26	44.27	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 2.2E-27 score: 96.1
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..196 score: 10.310547
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 561..647 e-value: 1.3E-14 score: 55.9
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 287..383 e-value: 2.7E-34 score: 117.6
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 496..552 e-value: 7.3E-17 score: 61.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 206..296 e-value: 1.0E-30 score: 107.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 1.9E-84 score: 284.2
None	No IPR available	GENE3D	1.10.340.70		coord: 462..551 e-value: 2.9E-18 score: 67.9
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 1.9E-84 score: 284.2
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 13..646
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 290..405 e-value: 1.95042E-58 score: 190.396
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 1.27301E-92 score: 281.791
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 563..647 score: 9.226715
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 564..646
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..389

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0094171.1	Cmc04g0094171.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding