Cmc04g0093841 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCATAATCCCCAGCACTCTCACTGTCTTCTTCGGTCTAAAACTTAGAACCATTCTCCGCGGGCTCAGGGTTTAAGGACAAATTTCTCTTCTCTAAAACCCTAAAATTATGCCCTCTCAATCCTTCTCTCGTGGCCTTACCTCCCCACTTCTCGGATTACAAGATGCCCGTTCTCGTTTTCATCAAATGGTTTGTACTTACCAATACTTAATTTTACGATTGTTCTCTCATTCATTACTAACCTCATAGTTTTGTTCTTAATTTCTTCTCCAGCAATTGGGAAACCCAGTTTCGCCAAGGAGACCACGAGTGCAGCTTGAATTCTCATCCAAGTGTACGTTTTCAATTATTTTTTAATTTTCACCATGTTAATAGTAGTTAATATTGAGTGAGAGCTGTCTGCTCCAATAATTTGGCAGGTAATGTGTTGAAGAGGAAGAGATGGGCGTTCGTGTGTGTGGCTAATTCTAACAAAAGCCCTCAGCTGGAATCATCTGGAGAGGAAAATCATGTTCTGTATGTTAGTAGATTGAATGGAGTGGAGCCCTTTCATGGGAAATGTGGTTCTGTCTCATTTCATGGTCTGTCTCACCAGTTGGTAGAAGAGGGTAAATTGATGTCATCTCCTTTTAGAGAAGAAAAGGGCTCTATCCTTTGGGTACTGGCTCCTGCTGCGTTTATCTCTTCTTTGATTCTGCCTCAAGTTTTCCTTGGCGGTCTAATTGAGGCTTTCTTCAAGAATGGAATTCTCGTAGGTATTTAATATTCAACTTAGTTCATTTCTATATTGTGGTTTCTGGGGTTTCCTTATATCTGGTGTCTGTTTCATATCACTCTGTGCGGTATTATTGGCAGCAGAATTTATAATTGTTATCTAAACTACTAACAAAATACAATTGCATGGTTCAAGCAGAAATTGTGAGTTCATTGGTGTTTGAAGTCTTGTTTTATGTTGGAGTCGCGACATTCCTGCTCGTTACAGATCGTGTTCAAAGACCATACTTACAATTCAGCTCGAAGAGATGGAGCCTCATTACAGGCCTTAGAGGATACTTGTCAACAGCTTTCTTCATTGCTGGCTTTAAGGTTGTAGCTCCACTATTTGCTGTCTATGTAACTTGGCCGATGATTGGGCTGCCTGCGCTTGTTGCAGTGTTCCCTTTTCTGGTTGGTTGTATCGTTCAGTTAGCATTTGAAACCCATCTTGATAGGCGTGGCTCCGCTTCTTGGCCACTTGTTCCAATCATTTTTGAGGTAGTTCCCTTATAGTTATTAACTCATTCCTCATTTCTTCCGAAAAGGAAACAATATATTTAACAAATTGAATCAACTTGCAGGTATATAGGCTTTACCAGTTGACGAAAGCTGCCCATTTTATGGAGAGCTTGATGTTCCAAATGAGAGGGCTTCCGACGTCTCCAGAGTTGTTGGAAAAAAGTGGAGCTCTTTTCGCTATGATGATAACCTTTCAAATCTTAGGGGTGGTATGTCTCTGGTCGTTGATGACTTTCCTTTTGAGGCTTTTTCCTTCCAGACCCGTGGCAGAGAATTACTAGTGTTAACTTGTTACATTGTGTACATTTTGTTACAAGTAGTTGTTGAACGTTTATCATAATTTGTTGTTCAATGAGCTCCATATTGTTGTATCCCCATCAATTGATATCGACAACCTTTCTGATCTCAAGCTGAAGGAAAGATAGGACTTGACGTCCTGTTTCACATGAGTAAATTTTCTTCAGTTGCAAGTATATATTACTTCTCTTCTATACAATGATTTTCTTTGATC TCATAATCCCCAGCACTCTCACTGTCTTCTTCGGTCTAAAACTTAGAACCATTCTCCGCGGGCTCAGGGTTTAAGGACAAATTTCTCTTCTCTAAAACCCTAAAATTATGCCCTCTCAATCCTTCTCTCGTGGCCTTACCTCCCCACTTCTCGGATTACAAGATGCCCGTTCTCGTTTTCATCAAATGCAATTGGGAAACCCAGTTTCGCCAAGGAGACCACGAGTGCAGCTTGAATTCTCATCCAAGTGTAATGTGTTGAAGAGGAAGAGATGGGCGTTCGTGTGTGTGGCTAATTCTAACAAAAGCCCTCAGCTGGAATCATCTGGAGAGGAAAATCATGTTCTGTATGTTAGTAGATTGAATGGAGTGGAGCCCTTTCATGGGAAATGTGGTTCTGTCTCATTTCATGGTCTGTCTCACCAGTTGGTAGAAGAGGGTAAATTGATGTCATCTCCTTTTAGAGAAGAAAAGGGCTCTATCCTTTGGGTACTGGCTCCTGCTGCGTTTATCTCTTCTTTGATTCTGCCTCAAGTTTTCCTTGGCGGTCTAATTGAGGCTTTCTTCAAGAATGGAATTCTCGTAGAAATTGTGAGTTCATTGGTGTTTGAAGTCTTGTTTTATGTTGGAGTCGCGACATTCCTGCTCGTTACAGATCGTGTTCAAAGACCATACTTACAATTCAGCTCGAAGAGATGGAGCCTCATTACAGGCCTTAGAGGATACTTGTCAACAGCTTTCTTCATTGCTGGCTTTAAGGTTGTAGCTCCACTATTTGCTGTCTATGTAACTTGGCCGATGATTGGGCTGCCTGCGCTTGTTGCAGTGTTCCCTTTTCTGGTTGGTTGTATCGTTCAGTTAGCATTTGAAACCCATCTTGATAGGCGTGGCTCCGCTTCTTGGCCACTTGTTCCAATCATTTTTGAGGTATATAGGCTTTACCAGTTGACGAAAGCTGCCCATTTTATGGAGAGCTTGATGTTCCAAATGAGAGGGCTTCCGACGTCTCCAGAGTTGTTGGAAAAAAGTGGAGCTCTTTTCGCTATGATGATAACCTTTCAAATCTTAGGGGTGGTATGTCTCTGGTCGTTGATGACTTTCCTTTTGAGGCTTTTTCCTTCCAGACCCGTGGCAGAGAATTACTAGTGTTAACTTGTTACATTGTGTACATTTTGTTACAAGTAGTTGTTGAACGTTTATCATAATTTGTTGTTCAATGAGCTCCATATTGTTGTATCCCCATCAATTGATATCGACAACCTTTCTGATCTCAAGCTGAAGGAAAGATAGGACTTGACGTCCTGTTTCACATGAGTAAATTTTCTTCAGTTGCAAGTATATATTACTTCTCTTCTATACAATGATTTTCTTTGATC ATGCCCTCTCAATCCTTCTCTCGTGGCCTTACCTCCCCACTTCTCGGATTACAAGATGCCCGTTCTCGTTTTCATCAAATGCAATTGGGAAACCCAGTTTCGCCAAGGAGACCACGAGTGCAGCTTGAATTCTCATCCAAGTGTAATGTGTTGAAGAGGAAGAGATGGGCGTTCGTGTGTGTGGCTAATTCTAACAAAAGCCCTCAGCTGGAATCATCTGGAGAGGAAAATCATGTTCTGTATGTTAGTAGATTGAATGGAGTGGAGCCCTTTCATGGGAAATGTGGTTCTGTCTCATTTCATGGTCTGTCTCACCAGTTGGTAGAAGAGGGTAAATTGATGTCATCTCCTTTTAGAGAAGAAAAGGGCTCTATCCTTTGGGTACTGGCTCCTGCTGCGTTTATCTCTTCTTTGATTCTGCCTCAAGTTTTCCTTGGCGGTCTAATTGAGGCTTTCTTCAAGAATGGAATTCTCGTAGAAATTGTGAGTTCATTGGTGTTTGAAGTCTTGTTTTATGTTGGAGTCGCGACATTCCTGCTCGTTACAGATCGTGTTCAAAGACCATACTTACAATTCAGCTCGAAGAGATGGAGCCTCATTACAGGCCTTAGAGGATACTTGTCAACAGCTTTCTTCATTGCTGGCTTTAAGGTTGTAGCTCCACTATTTGCTGTCTATGTAACTTGGCCGATGATTGGGCTGCCTGCGCTTGTTGCAGTGTTCCCTTTTCTGGTTGGTTGTATCGTTCAGTTAGCATTTGAAACCCATCTTGATAGGCGTGGCTCCGCTTCTTGGCCACTTGTTCCAATCATTTTTGAGGTATATAGGCTTTACCAGTTGACGAAAGCTGCCCATTTTATGGAGAGCTTGATGTTCCAAATGAGAGGGCTTCCGACGTCTCCAGAGTTGTTGGAAAAAAGTGGAGCTCTTTTCGCTATGATGATAACCTTTCAAATCTTAGGGGTGGTATGTCTCTGGTCGTTGATGACTTTCCTTTTGAGGCTTTTTCCTTCCAGACCCGTGGCAGAGAATTACTAG MPSQSFSRGLTSPLLGLQDARSRFHQMQLGNPVSPRRPRVQLEFSSKCNVLKRKRWAFVCVANSNKSPQLESSGEENHVLYVSRLNGVEPFHGKCGSVSFHGLSHQLVEEGKLMSSPFREEKGSILWVLAPAAFISSLILPQVFLGGLIEAFFKNGILVEIVSSLVFEVLFYVGVATFLLVTDRVQRPYLQFSSKRWSLITGLRGYLSTAFFIAGFKVVAPLFAVYVTWPMIGLPALVAVFPFLVGCIVQLAFETHLDRRGSASWPLVPIIFEVYRLYQLTKAAHFMESLMFQMRGLPTSPELLEKSGALFAMMITFQILGVVCLWSLMTFLLRLFPSRPVAENY Homology
BLAST of Cmc04g0093841 vs. NCBI nr
Match: XP_008466634.1 (PREDICTED: uncharacterized protein LOC103503989 [Cucumis melo]) HSP 1 Score: 674.5 bits (1739), Expect = 4.9e-190 Identity = 343/345 (99.42%), Postives = 344/345 (99.71%), Query Frame = 0
BLAST of Cmc04g0093841 vs. NCBI nr
Match: TYK31605.1 (TRNA-processing ribonuclease BN [Cucumis melo var. makuwa]) HSP 1 Score: 627.5 bits (1617), Expect = 6.9e-176 Identity = 320/322 (99.38%), Postives = 321/322 (99.69%), Query Frame = 0
BLAST of Cmc04g0093841 vs. NCBI nr
Match: KAA0051699.1 (uncharacterized protein E6C27_scaffold60G00840 [Cucumis melo var. makuwa]) HSP 1 Score: 618.2 bits (1593), Expect = 4.2e-173 Identity = 320/324 (98.77%), Postives = 321/324 (99.07%), Query Frame = 0
BLAST of Cmc04g0093841 vs. NCBI nr
Match: XP_038905249.1 (uncharacterized protein LOC120091332 [Benincasa hispida]) HSP 1 Score: 605.9 bits (1561), Expect = 2.2e-169 Identity = 309/345 (89.57%), Postives = 326/345 (94.49%), Query Frame = 0
BLAST of Cmc04g0093841 vs. NCBI nr
Match: XP_004147799.1 (uncharacterized protein LOC101207359 [Cucumis sativus] >KAE8651317.1 hypothetical protein Csa_001576 [Cucumis sativus]) HSP 1 Score: 603.6 bits (1555), Expect = 1.1e-168 Identity = 307/345 (88.99%), Postives = 323/345 (93.62%), Query Frame = 0
BLAST of Cmc04g0093841 vs. ExPASy TrEMBL
Match: A0A1S3CRR4 (uncharacterized protein LOC103503989 OS=Cucumis melo OX=3656 GN=LOC103503989 PE=4 SV=1) HSP 1 Score: 674.5 bits (1739), Expect = 2.4e-190 Identity = 343/345 (99.42%), Postives = 344/345 (99.71%), Query Frame = 0
BLAST of Cmc04g0093841 vs. ExPASy TrEMBL
Match: A0A5D3E8K1 (tRNA-processing ribonuclease BN OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2376G00070 PE=4 SV=1) HSP 1 Score: 627.5 bits (1617), Expect = 3.4e-176 Identity = 320/322 (99.38%), Postives = 321/322 (99.69%), Query Frame = 0
BLAST of Cmc04g0093841 vs. ExPASy TrEMBL
Match: A0A5A7UDY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00840 PE=4 SV=1) HSP 1 Score: 618.2 bits (1593), Expect = 2.0e-173 Identity = 320/324 (98.77%), Postives = 321/324 (99.07%), Query Frame = 0
BLAST of Cmc04g0093841 vs. ExPASy TrEMBL
Match: A0A0A0LD62 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854210 PE=4 SV=1) HSP 1 Score: 582.8 bits (1501), Expect = 9.5e-163 Identity = 299/345 (86.67%), Postives = 315/345 (91.30%), Query Frame = 0
BLAST of Cmc04g0093841 vs. ExPASy TrEMBL
Match: A0A6J1CA74 (uncharacterized protein LOC111009450 OS=Momordica charantia OX=3673 GN=LOC111009450 PE=4 SV=1) HSP 1 Score: 560.1 bits (1442), Expect = 6.6e-156 Identity = 286/347 (82.42%), Postives = 315/347 (90.78%), Query Frame = 0
BLAST of Cmc04g0093841 vs. TAIR 10
Match: AT1G48460.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 345.9 bits (886), Expect = 3.7e-95 Identity = 173/284 (60.92%), Postives = 214/284 (75.35%), Query Frame = 0
BLAST of Cmc04g0093841 vs. TAIR 10
Match: AT5G63040.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 128.3 bits (321), Expect = 1.2e-29 Identity = 79/243 (32.51%), Postives = 132/243 (54.32%), Query Frame = 0
BLAST of Cmc04g0093841 vs. TAIR 10
Match: AT5G63040.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 128.3 bits (321), Expect = 1.2e-29 Identity = 79/243 (32.51%), Postives = 132/243 (54.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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