Cmc04g0093741 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0093741
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr04: 6091595 .. 6091927 (+)
RNA-Seq Expression	Cmc04g0093741
Synteny	Cmc04g0093741

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATGTCTAAACAATGAATTGGAACAACATCAGATGGAAACTATTCCTTATGCATCTATTGTTGGAAGCTTATTATATGCACAAACTTGCACTAGACCAGACATTAGTTTTGCTATGGGTATGCTAGGTAGGTATCAAAGTAATCCAGGAATGGAGCATTGGAAAGCTGCAAAGAAAGTTTTAAGGTATCTGCAAGGAACAAAAGATTATATGCTTACTTACAAGAGATCTGATCATCTTGAGGTGATTGGATATTCAGATTCAGATTTTGCCGAATGTTTGGATACAAGAAATTCCACTTTTGGCTATTTGTTCTTATTAGCTGACTGA

mRNA sequence

ATGCAATGTCTAAACAATGAATTGGAACAACATCAGATGGAAACTATTCCTTATGCATCTATTGTTGGAAGCTTATTATATGCACAAACTTGCACTAGACCAGACATTAGTTTTGCTATGGGTATGCTAGGTAGGTATCAAAGTAATCCAGGAATGGAGCATTGGAAAGCTGCAAAGAAAGTTTTAAGGTATCTGCAAGGAACAAAAGATTATATGCTTACTTACAAGAGATCTGATCATCTTGAGGTGATTGGATATTCAGATTCAGATTTTGCCGAATGTTTGGATACAAGAAATTCCACTTTTGGCTATTTGTTCTTATTAGCTGACTGA

Coding sequence (CDS)

ATGCAATGTCTAAACAATGAATTGGAACAACATCAGATGGAAACTATTCCTTATGCATCTATTGTTGGAAGCTTATTATATGCACAAACTTGCACTAGACCAGACATTAGTTTTGCTATGGGTATGCTAGGTAGGTATCAAAGTAATCCAGGAATGGAGCATTGGAAAGCTGCAAAGAAAGTTTTAAGGTATCTGCAAGGAACAAAAGATTATATGCTTACTTACAAGAGATCTGATCATCTTGAGGTGATTGGATATTCAGATTCAGATTTTGCCGAATGTTTGGATACAAGAAATTCCACTTTTGGCTATTTGTTCTTATTAGCTGACTGA

Protein sequence

MQCLNNELEQHQMETIPYASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAECLDTRNSTFGYLFLLAD

Homology

[Close]

BLAST of Cmc04g0093741 vs. NCBI nr
Match: KAA0032876.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 204.9 bits (520), Expect = 3.5e-49
Identity = 97/110 (88.18%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MQCLNNELEQHQMETIPYASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKK 60
           MQC  NELE++QMETIPYASIVGSLL AQTCTRPDISFA+GMLGRYQSNPGM+HWK AKK
Sbjct: 60  MQCPKNELERNQMETIPYASIVGSLLCAQTCTRPDISFAVGMLGRYQSNPGMDHWKVAKK 119

Query: 61  VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAECLDTRNSTFGYLFLLAD 111
           VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDF  C+DTR STFGYLFLLA+
Sbjct: 120 VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFTGCVDTRKSTFGYLFLLAE 169

[Close]

BLAST of Cmc04g0093741 vs. NCBI nr
Match: KAA0033349.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 203.4 bits (516), Expect = 1.0e-48
Identity = 97/110 (88.18%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MQCLNNELEQHQMETIPYASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKK 60
           MQC  NELE++QMETIPYASIVGSLLYAQTCTRPDISFA+GMLGRYQSNPGM+HWKAAKK
Sbjct: 226 MQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKK 285

Query: 61  VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAECLDTRNSTFGYLFLLAD 111
           V RYLQGTKDYMLTYKRSDHLEVIGYS SDF  C+DTR STFGYLFLLA+
Sbjct: 286 VSRYLQGTKDYMLTYKRSDHLEVIGYSYSDFFGCVDTRKSTFGYLFLLAE 335

[Close]

BLAST of Cmc04g0093741 vs. NCBI nr
Match: XP_031127470.1 (secreted RxLR effector protein 161-like [Ipomoea triloba])

HSP 1 Score: 201.8 bits (512), Expect = 3.0e-48
Identity = 94/110 (85.45%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MQCLNNELEQHQMETIPYASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKK 60
           MQC  NELE+ +ME IPYAS+VGSL+YAQTCTRPDISFA+GMLGRYQSNPGM+HWKAAKK
Sbjct: 20  MQCPKNELERKEMENIPYASVVGSLMYAQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKK 79

Query: 61  VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAECLDTRNSTFGYLFLLAD 111
           VLRYLQGTK+YMLTYKRSD LEVIGY+DSDFA CLDTR STFGYLFLLA+
Sbjct: 80  VLRYLQGTKEYMLTYKRSDRLEVIGYTDSDFAGCLDTRKSTFGYLFLLAE 129

[Close]

BLAST of Cmc04g0093741 vs. NCBI nr
Match: TYK29097.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 201.8 bits (512), Expect = 3.0e-48
Identity = 95/110 (86.36%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MQCLNNELEQHQMETIPYASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKK 60
           MQC  NELE+++METIPYASIVGSLLYAQTCTR DISFA+GML RYQSNPGM+HW+ AKK
Sbjct: 451 MQCPKNELERNKMETIPYASIVGSLLYAQTCTRSDISFAVGMLSRYQSNPGMDHWRTAKK 510

Query: 61  VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAECLDTRNSTFGYLFLLAD 111
           VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAEC+DTR STF YLFLLA+
Sbjct: 511 VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAECVDTRKSTFDYLFLLAE 560

[Close]

BLAST of Cmc04g0093741 vs. NCBI nr
Match: KAA0052755.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 96/110 (87.27%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MQCLNNELEQHQMETIPYASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKK 60
           MQC  NELE++QMETI YASIVGSLLYAQTCTR DISFA+GMLGRYQSNPGM+HWKAAKK
Sbjct: 804 MQCPKNELERNQMETISYASIVGSLLYAQTCTRLDISFAVGMLGRYQSNPGMDHWKAAKK 863

Query: 61  VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAECLDTRNSTFGYLFLLAD 111
           VLRYLQG KDYMLTYKRSDHLEVI YSDSDFA C+DTR STFGYLFLLA+
Sbjct: 864 VLRYLQGAKDYMLTYKRSDHLEVIEYSDSDFAGCVDTRKSTFGYLFLLAE 913

[Close]

BLAST of Cmc04g0093741 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21
Identity = 50/104 (48.08%), Postives = 69/104 (66.35%), Query Frame = 0


Query: 3    CLNNELEQHQMETIPYASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKKVL 62
            C     E+  M  +PY+S VGSL+YA  CTRPDI+ A+G++ R+  NPG EHW+A K +L
Sbjct: 1096 CPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWIL 1155

Query: 63   RYLQGTKDYMLTYKRSDHLEVIGYSDSDFAECLDTRNSTFGYLF 107
            RYL+GT    L +  SD + + GY+D+D A  +D R S+ GYLF
Sbjct: 1156 RYLRGTTGDCLCFGGSDPI-LKGYTDADMAGDIDNRKSSTGYLF 1198

[Close]

BLAST of Cmc04g0093741 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-20
Identity = 44/96 (45.83%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 13  METIPYASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKKVLRYLQGTKDYM 72
           M+ +PY S VG+++Y    TRPD++ A+G+L ++ S+P   HW+A K+VLRYLQ T+ Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 73  LTYKRSDHLEVIGYSDSDFAECLDTRNSTFGYLFLL 109
           L + R+   +++GYSD+D+A  +++R ST GYLF L
Sbjct: 61  LEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKL 96

[Close]

BLAST of Cmc04g0093741 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 85.9 bits (211), Expect = 3.1e-16
Identity = 44/96 (45.83%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 17   PYASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKKVLRYLQGTKDYMLTYK 76
            P  S++G L+Y   CTRPD++ A+ +L RY S    E W+  K+VLRYL+GT D  L +K
Sbjct: 1180 PCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFK 1239

Query: 77   RSDHLE--VIGYSDSDFAECLDTRNSTFGYLFLLAD 111
            ++   E  +IGY DSD+A     R ST GYLF + D
Sbjct: 1240 KNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFD 1275

[Close]

BLAST of Cmc04g0093741 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.5e-14
Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 0


Query: 18   YASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKKVLRYLQGTKDYMLTYKR 77
            Y  IVGSL Y    TRPD+S+A+  L +Y   P  +HW A K+VLRYL GT D+ +  K+
Sbjct: 1228 YRGIVGSLQYL-AFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKK 1287

Query: 78   SDHLEVIGYSDSDFAECLDTRNSTFGYLFLL 109
             + L +  YSD+D+A   D   ST GY+  L
Sbjct: 1288 GNTLSLHAYSDADWAGDTDDYVSTNGYIVYL 1317

[Close]

BLAST of Cmc04g0093741 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 9.4e-13
Identity = 38/99 (38.38%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 11  HQMETIPYASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKKVLRYLQGTKD 70
           H  +  PY SIVG LL+     RPDIS+ + +L R+   P   H ++A++VLRYL  T+ 
Sbjct: 176 HLKDITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRS 235

Query: 71  YMLTYKRSDHLEVIGYSDSDFAECLDTRNSTFGYLFLLA 110
             L Y+    L +  Y D+      D  +ST GY+ LLA
Sbjct: 236 MCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLA 274

[Close]

BLAST of Cmc04g0093741 vs. ExPASy TrEMBL
Match: A0A5A7SS51 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G00410 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.7e-49
Identity = 97/110 (88.18%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MQCLNNELEQHQMETIPYASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKK 60
           MQC  NELE++QMETIPYASIVGSLL AQTCTRPDISFA+GMLGRYQSNPGM+HWK AKK
Sbjct: 60  MQCPKNELERNQMETIPYASIVGSLLCAQTCTRPDISFAVGMLGRYQSNPGMDHWKVAKK 119

Query: 61  VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAECLDTRNSTFGYLFLLAD 111
           VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDF  C+DTR STFGYLFLLA+
Sbjct: 120 VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFTGCVDTRKSTFGYLFLLAE 169

[Close]

BLAST of Cmc04g0093741 vs. ExPASy TrEMBL
Match: A0A5A7SVZ5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G001720 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.0e-49
Identity = 97/110 (88.18%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MQCLNNELEQHQMETIPYASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKK 60
           MQC  NELE++QMETIPYASIVGSLLYAQTCTRPDISFA+GMLGRYQSNPGM+HWKAAKK
Sbjct: 226 MQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHWKAAKK 285

Query: 61  VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAECLDTRNSTFGYLFLLAD 111
           V RYLQGTKDYMLTYKRSDHLEVIGYS SDF  C+DTR STFGYLFLLA+
Sbjct: 286 VSRYLQGTKDYMLTYKRSDHLEVIGYSYSDFFGCVDTRKSTFGYLFLLAE 335

[Close]

BLAST of Cmc04g0093741 vs. ExPASy TrEMBL
Match: A0A5D3DYZ7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G002310 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 95/110 (86.36%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MQCLNNELEQHQMETIPYASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKK 60
           MQC  NELE+++METIPYASIVGSLLYAQTCTR DISFA+GML RYQSNPGM+HW+ AKK
Sbjct: 451 MQCPKNELERNKMETIPYASIVGSLLYAQTCTRSDISFAVGMLSRYQSNPGMDHWRTAKK 510

Query: 61  VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAECLDTRNSTFGYLFLLAD 111
           VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAEC+DTR STF YLFLLA+
Sbjct: 511 VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAECVDTRKSTFDYLFLLAE 560

[Close]

BLAST of Cmc04g0093741 vs. ExPASy TrEMBL
Match: A0A5A7UG95 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43055G00040 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.2e-48
Identity = 96/110 (87.27%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MQCLNNELEQHQMETIPYASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKK 60
           MQC  NELE++QMETI YASIVGSLLYAQTCTR DISFA+GMLGRYQSNPGM+HWKAAKK
Sbjct: 804 MQCPKNELERNQMETISYASIVGSLLYAQTCTRLDISFAVGMLGRYQSNPGMDHWKAAKK 863

Query: 61  VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAECLDTRNSTFGYLFLLAD 111
           VLRYLQG KDYMLTYKRSDHLEVI YSDSDFA C+DTR STFGYLFLLA+
Sbjct: 864 VLRYLQGAKDYMLTYKRSDHLEVIEYSDSDFAGCVDTRKSTFGYLFLLAE 913

[Close]

BLAST of Cmc04g0093741 vs. ExPASy TrEMBL
Match: A0A5D3BWW5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00300 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.2e-48
Identity = 96/110 (87.27%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MQCLNNELEQHQMETIPYASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKK 60
           MQC  NELE++QMETI YASIVGSLLYAQTCTR DISFA+GMLGRYQSNPGM+HWKAAKK
Sbjct: 804 MQCPKNELERNQMETISYASIVGSLLYAQTCTRLDISFAVGMLGRYQSNPGMDHWKAAKK 863

Query: 61  VLRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAECLDTRNSTFGYLFLLAD 111
           VLRYLQG KDYMLTYKRSDHLEVI YSDSDFA C+DTR STFGYLFLLA+
Sbjct: 864 VLRYLQGAKDYMLTYKRSDHLEVIEYSDSDFAGCVDTRKSTFGYLFLLAE 913

[Close]

BLAST of Cmc04g0093741 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 2.4e-11
Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 0


Query: 18  YASIVGSLLYAQTCTRPDISFAMGMLGRYQSNPGMEHWKAAKKVLRYLQGTKDYMLTYKR 77
           + SIVG+L Y  T TRPDIS+A+ ++ +    P +  +   K+VLRY++GT  + L   +
Sbjct: 100 FRSIVGALQYL-TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHK 159

Query: 78  SDHLEVIGYSDSDFAECLDTRNSTFGYLFLL 109
           +  L V  + DSD+A C  TR ST G+   L
Sbjct: 160 NSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 189

[Close]

BLAST of Cmc04g0093741 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 61.2 bits (147), Expect = 5.9e-10
Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 30  TCTRPDISFAMGMLGRYQSNPGMEHWKAAKKVLRYLQGTKDYMLTYKRSDHLEVIGYSDS 89
           T TRPD++FA+  L ++ S       +A  KVL Y++GT    L Y  +  L++  ++DS
Sbjct: 4   TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADS 63

Query: 90  DFAECLDTRNSTFGYLFLL 109
           D+A C DTR S  G+  L+
Sbjct: 64  DWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:

BLAST of Cmc04g0093741 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032876.1	3.5e-49	88.18	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0033349.1	1.0e-48	88.18	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
XP_031127470.1	3.0e-48	85.45	secreted RxLR effector protein 161-like [Ipomoea triloba]	[more]
TYK29097.1	3.0e-48	86.36	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0052755.1	1.5e-47	87.27	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc04g0093741 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.1e-21	48.08	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P0CV72	1.6e-20	45.83	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
P04146	3.1e-16	45.83	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	8.5e-14	45.05	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P25600	9.4e-13	38.38	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc04g0093741 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SS51	1.7e-49	88.18	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SVZ5	5.0e-49	88.18	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DYZ7	1.4e-48	86.36	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7UG95	7.2e-48	87.27	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3BWW5	7.2e-48	87.27	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc04g0093741 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00810.1	2.4e-11	39.56	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	5.9e-10	37.97	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 17..106
None	No IPR available	PANTHER	PTHR11439:SF308	SUBFAMILY NOT NAMED	coord: 17..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0093741.1	Cmc04g0093741.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding