Cmc04g0093321 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACCACACAAATTAGATTAAGAGTAACTCACATCCAAATTTGAGAAAAAATGAAGTCAGTTTTTCTAATTTGCTTTATTTTGAGTTTAGTTGCAGGAAGATCCACGGCCTCATTTGGGAAGTGCTATGCCAAGTGCTTTATAGTGTGTGCTATCACACCAGGCATTCCCGTTGGCACTTGTGGTGCAAAATGTTTGGCTGATTGTCTTTTCATTGCTTCTTCTCCTATGGATTTGAATCATACAGACACTCGTTACTTTTGCAAACTTGGTTGTGCCACTTCTCGTTGCACCAAATTCAGCACCAAGAAAGACCCTGGTCAGAAATTTTCTAATACTTTCGTTACTATTTATTTATTTTAATTAGATTTTTCATCGATTGATTTTAAATGTTGTTGACCGTAAAAGTCAGAGTAATATATGTACGTAATTTTCTATACTATTATATTGTGTTAGGGAATATTTTCAATCCAAATCATTATATTTTATGCTTTAAGCATTATGAGTGTCGACAAAAAGTCTCTCCCGATGAAAATACATTGGAAGACCATTTTGCTGATGTCGACCATAAGATCAGTAACATTTATATTAAATTTTTATCTCACTATTTCTAGAGTTTTGACTGATGCTTTTCATCATGTTGGATTGTTTTCTATGAACTTGACAGCCGAGAAGAAAGTCGAAAGTTGTGTGAATACATGTGATCAAACATGCATGAAAGCTTAACAAGCCAAAACATGAAAGAAGGAGTTGGGATTGGCTTCAAATATACCATATATGAATAAACAAAAACCAATGGTTAAAAAAAACCATTTGTTTAAAAGCCATATTCCAAATTTTAAGCATATATATATATATATAGTCTCAAGTTTGTGCATGTAGTTAATTATGGTCAATATGAAAAAAAGAAAAGTT AAACCACACAAATTAGATTAAGAGTAACTCACATCCAAATTTGAGAAAAAATGAAGTCAGTTTTTCTAATTTGCTTTATTTTGAGTTTAGTTGCAGGAAGATCCACGGCCTCATTTGGGAAGTGCTATGCCAAGTGCTTTATAGTGTGTGCTATCACACCAGGCATTCCCGTTGGCACTTGTGGTGCAAAATGTTTGGCTGATTGTCTTTTCATTGCTTCTTCTCCTATGGATTTGAATCATACAGACACTCGTTACTTTTGCAAACTTGGTTGTGCCACTTCTCGTTGCACCAAATTCAGCACCAAGAAAGACCCTGCCGAGAAGAAAGTCGAAAGTTGTGTGAATACATGTGATCAAACATGCATGAAAGCTTAACAAGCCAAAACATGAAAGAAGGAGTTGGGATTGGCTTCAAATATACCATATATGAATAAACAAAAACCAATGGTTAAAAAAAACCATTTGTTTAAAAGCCATATTCCAAATTTTAAGCATATATATATATATATAGTCTCAAGTTTGTGCATGTAGTTAATTATGGTCAATATGAAAAAAAGAAAAGTT ATGAAGTCAGTTTTTCTAATTTGCTTTATTTTGAGTTTAGTTGCAGGAAGATCCACGGCCTCATTTGGGAAGTGCTATGCCAAGTGCTTTATAGTGTGTGCTATCACACCAGGCATTCCCGTTGGCACTTGTGGTGCAAAATGTTTGGCTGATTGTCTTTTCATTGCTTCTTCTCCTATGGATTTGAATCATACAGACACTCGTTACTTTTGCAAACTTGGTTGTGCCACTTCTCGTTGCACCAAATTCAGCACCAAGAAAGACCCTGCCGAGAAGAAAGTCGAAAGTTGTGTGAATACATGTGATCAAACATGCATGAAAGCTTAA MKSVFLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPMDLNHTDTRYFCKLGCATSRCTKFSTKKDPAEKKVESCVNTCDQTCMKA Homology
BLAST of Cmc04g0093321 vs. NCBI nr
Match: XP_038899787.1 (thionin-like protein 2 [Benincasa hispida]) HSP 1 Score: 204.5 bits (519), Expect = 4.5e-49 Identity = 94/108 (87.04%), Postives = 100/108 (92.59%), Query Frame = 0
BLAST of Cmc04g0093321 vs. NCBI nr
Match: XP_023000407.1 (thionin-like protein 2 [Cucurbita maxima]) HSP 1 Score: 200.7 bits (509), Expect = 6.5e-48 Identity = 92/108 (85.19%), Postives = 100/108 (92.59%), Query Frame = 0
BLAST of Cmc04g0093321 vs. NCBI nr
Match: KAG6593441.1 (Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 198.4 bits (503), Expect = 3.2e-47 Identity = 91/108 (84.26%), Postives = 99/108 (91.67%), Query Frame = 0
BLAST of Cmc04g0093321 vs. NCBI nr
Match: KAG7025781.1 (Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 198.4 bits (503), Expect = 3.2e-47 Identity = 91/108 (84.26%), Postives = 99/108 (91.67%), Query Frame = 0
BLAST of Cmc04g0093321 vs. NCBI nr
Match: KAG7014098.1 (Thionin-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 181.4 bits (459), Expect = 4.1e-42 Identity = 85/108 (78.70%), Postives = 94/108 (87.04%), Query Frame = 0
BLAST of Cmc04g0093321 vs. ExPASy Swiss-Prot
Match: A8MRP4 (Thionin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12663 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07 Identity = 35/110 (31.82%), Postives = 54/110 (49.09%), Query Frame = 0
BLAST of Cmc04g0093321 vs. ExPASy Swiss-Prot
Match: F4IDU9 (Thionin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g12660 PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 7.1e-05 Identity = 30/80 (37.50%), Postives = 39/80 (48.75%), Query Frame = 0
BLAST of Cmc04g0093321 vs. ExPASy TrEMBL
Match: A0A6J1KDK0 (thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111494667 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 3.2e-48 Identity = 92/108 (85.19%), Postives = 100/108 (92.59%), Query Frame = 0
BLAST of Cmc04g0093321 vs. ExPASy TrEMBL
Match: A0A0A0KC18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446640 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 8.9e-43 Identity = 88/100 (88.00%), Postives = 91/100 (91.00%), Query Frame = 0
BLAST of Cmc04g0093321 vs. ExPASy TrEMBL
Match: A0A6J1DDL8 (thionin-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111019402 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 4.3e-37 Identity = 80/107 (74.77%), Postives = 89/107 (83.18%), Query Frame = 0
BLAST of Cmc04g0093321 vs. ExPASy TrEMBL
Match: A0A5D3BCH5 (Thionin-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00550 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 3.9e-30 Identity = 73/111 (65.77%), Postives = 80/111 (72.07%), Query Frame = 0
BLAST of Cmc04g0093321 vs. ExPASy TrEMBL
Match: A0A059AI82 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_J03010 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 7.1e-24 Identity = 55/105 (52.38%), Postives = 72/105 (68.57%), Query Frame = 0
BLAST of Cmc04g0093321 vs. TAIR 10
Match: AT1G12663.1 (Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. ) HSP 1 Score: 57.4 bits (137), Expect = 8.3e-09 Identity = 35/110 (31.82%), Postives = 54/110 (49.09%), Query Frame = 0
BLAST of Cmc04g0093321 vs. TAIR 10
Match: AT1G12672.2 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12663.1). ) HSP 1 Score: 52.4 bits (124), Expect = 2.7e-07 Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 0
BLAST of Cmc04g0093321 vs. TAIR 10
Match: AT1G12660.1 (Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. ) HSP 1 Score: 48.1 bits (113), Expect = 5.1e-06 Identity = 30/80 (37.50%), Postives = 39/80 (48.75%), Query Frame = 0
BLAST of Cmc04g0093321 vs. TAIR 10
Match: AT1G12672.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12663.1); Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 1.1e-05 Identity = 20/48 (41.67%), Postives = 29/48 (60.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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