Cmc04g0092801 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0092801
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description50S ribosomal protein L31
LocationCMiso1.1chr04: 4771070 .. 4771951 (-)
RNA-Seq ExpressionCmc04g0092801
SyntenyCmc04g0092801
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGATTGGAGACGCGACAAGGCCTTGAAGAAGAGCTCATCTCCCTCTTATCCTCACTCACCACAAGCAAACGCAGCAATGGCGCTCAACCTAACAAATTCCTTCCTTCAACTTCAACGGCCAATTTCCTCGGCCGTTGCACCGCCCAAGCACAAGGTACTTTCACGTTTCACCCTTCTCTTCACTCCTCAATTTTCCAAGACGCTGATTATTCATTTCCGTTCGCCCCCAATTTTTGCACAATTTCCAGGAATCTGGAGCTAGAAGTCACCGGCCGGTGGTGACCTGCCGGAAAAAGGATCTGCACCCCCAATTTTACGAGGATGCTAAGGTTTATTGCAACGGAGAATTAGTTATGACGACCGGCGGGACCCAGAAAGAGTATTCAGTGGACGTGTGGTCGGGAAACCATCCGTTCTATTTGGGAAGCCGATCCGCCCTGCTCGTCGACGCCGATCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTGATGGAGATTCCTGTTCTTAAGGGCGAAATCATTCTGCCCTCAAAGCGTAAATCCGCAAAAGGGAAGAAGAAGTAGAAGATTCTGAAGATTTCAGTTGGGTTGGTAATCAGTTAAATTCCAAATGCATATTGAGATTTTTGGTTCTTTCAATTGCTTTATATATATCCTCCGTGTAATTTAGCAAAATCGACACTAATTTGTCTGAACCAAACGATTTGTTTCTTTGCCTCGCACTGCCTTTGCTAATTCTAAATGCTCAAACTGTTGATGAAGTTCTGAATGCACCAATGGATTAGTGTTTGGTGGGTGAGGAAATTCATGAAGGAAAGAAAGTTCGAGAAATTAGATCAGGAATTGATTGGTAACTGACCATTTTG

mRNA sequence

ATGAGTGATTGGAGACGCGACAAGGCCTTGAAGAAGAGCTCATCTCCCTCTTATCCTCACTCACCACAAGCAAACGCAGCAATGGCGCTCAACCTAACAAATTCCTTCCTTCAACTTCAACGGCCAATTTCCTCGGCCGTTGCACCGCCCAAGCACAAGGAATCTGGAGCTAGAAGTCACCGGCCGGTGGTGACCTGCCGGAAAAAGGATCTGCACCCCCAATTTTACGAGGATGCTAAGGTTTATTGCAACGGAGAATTAGTTATGACGACCGGCGGGACCCAGAAAGAGTATTCAGTGGACGTGTGGTCGGGAAACCATCCGTTCTATTTGGGAAGCCGATCCGCCCTGCTCGTCGACGCCGATCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTGATGGAGATTCCTGTTCTTAAGGGCGAAATCATTCTGCCCTCAAAGCGTAAATCCGCAAAAGGGAAGAAGAAGTAGAAGATTCTGAAGATTTCAGTTGGGTTGGTAATCAGTTAAATTCCAAATGCATATTGAGATTTTTGGTTCTTTCAATTGCTTTATATATATCCTCCGTGTAATTTAGCAAAATCGACACTAATTTGTCTGAACCAAACGATTTGTTTCTTTGCCTCGCACTGCCTTTGCTAATTCTAAATGCTCAAACTGTTGATGAAGTTCTGAATGCACCAATGGATTAGTGTTTGGTGGGTGAGGAAATTCATGAAGGAAAGAAAGTTCGAGAAATTAGATCAGGAATTGATTGGTAACTGACCATTTTG

Coding sequence (CDS)

ATGAGTGATTGGAGACGCGACAAGGCCTTGAAGAAGAGCTCATCTCCCTCTTATCCTCACTCACCACAAGCAAACGCAGCAATGGCGCTCAACCTAACAAATTCCTTCCTTCAACTTCAACGGCCAATTTCCTCGGCCGTTGCACCGCCCAAGCACAAGGAATCTGGAGCTAGAAGTCACCGGCCGGTGGTGACCTGCCGGAAAAAGGATCTGCACCCCCAATTTTACGAGGATGCTAAGGTTTATTGCAACGGAGAATTAGTTATGACGACCGGCGGGACCCAGAAAGAGTATTCAGTGGACGTGTGGTCGGGAAACCATCCGTTCTATTTGGGAAGCCGATCCGCCCTGCTCGTCGACGCCGATCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTGATGGAGATTCCTGTTCTTAAGGGCGAAATCATTCTGCCCTCAAAGCGTAAATCCGCAAAAGGGAAGAAGAAGTAG

Protein sequence

MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKESGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Homology
[Close]
BLAST of Cmc04g0092801 vs. NCBI nr
Match: XP_008466538.1 (PREDICTED: 50S ribosomal protein L31, chloroplastic [Cucumis melo] >ADN34183.1 50S ribosomal protein l31 [Cucumis melo subsp. melo])

HSP 1 Score: 322.8 bits (826), Expect = 1.7e-84
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0 

Query: 1   MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKESGARSH 60
           MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPIS AVAPPKHKESGARSH
Sbjct: 1   MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISPAVAPPKHKESGARSH 60

Query: 61  RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD 120
           RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD
Sbjct: 61  RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD 120

Query: 121 ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 162
           ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Sbjct: 121 ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 161

[Close]
BLAST of Cmc04g0092801 vs. NCBI nr
Match: KAA0041569.1 (50S ribosomal protein L31 [Cucumis melo var. makuwa])

HSP 1 Score: 312.8 bits (800), Expect = 1.8e-81
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 5   RRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKESGARSHRPVV 64
           RRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPIS AVAPPKHKESGARSHRPVV
Sbjct: 30  RRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISPAVAPPKHKESGARSHRPVV 89

Query: 65  TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQV 124
           TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQV
Sbjct: 90  TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQV 149

Query: 125 EKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 162
           EKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Sbjct: 150 EKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 186

[Close]
BLAST of Cmc04g0092801 vs. NCBI nr
Match: XP_038896266.1 (50S ribosomal protein L31, chloroplastic [Benincasa hispida] >XP_038896267.1 50S ribosomal protein L31, chloroplastic [Benincasa hispida])

HSP 1 Score: 295.8 bits (756), Expect = 2.2e-76
Identity = 147/161 (91.30%), Postives = 154/161 (95.65%), Query Frame = 0 

Query: 1   MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKESGARSH 60
           MS W RDKAL K+SSPSYPHSP ANAAMALNLTNSFLQLQRP S AVAPPK+KESGAR+H
Sbjct: 1   MSGWTRDKAL-KNSSPSYPHSPLANAAMALNLTNSFLQLQRPSSLAVAPPKNKESGARTH 60

Query: 61  RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD 120
           RPVVTCRKKDLHPQFYED+KVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD
Sbjct: 61  RPVVTCRKKDLHPQFYEDSKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD 120

Query: 121 ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 162
           ADQVEKFRKKFGELSQLMEIPVLKGEI+LP+K+KS KGKKK
Sbjct: 121 ADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKKKSGKGKKK 160

[Close]
BLAST of Cmc04g0092801 vs. NCBI nr
Match: XP_004147854.2 (50S ribosomal protein L31, chloroplastic [Cucumis sativus] >KGN59985.1 hypothetical protein Csa_001806 [Cucumis sativus])

HSP 1 Score: 264.6 bits (675), Expect = 5.5e-67
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 0 

Query: 28  MALNLTNSFLQLQRPISSAVAPPKHKESGARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 87
           MALNLTNSFLQLQRPIS AVAPPK KESGARS+RPVVTCRKKDLHPQFYEDAKVYCNGEL
Sbjct: 1   MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGEL 60

Query: 88  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 147
           VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI
Sbjct: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120

Query: 148 ILPSKRKSAKGKKK 162
           ILPSKRKSAKGKKK
Sbjct: 121 ILPSKRKSAKGKKK 134

[Close]
BLAST of Cmc04g0092801 vs. NCBI nr
Match: XP_022136375.1 (LOW QUALITY PROTEIN: 50S ribosomal protein L31, chloroplastic [Momordica charantia])

HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63
Identity = 139/167 (83.23%), Postives = 143/167 (85.63%), Query Frame = 0 

Query: 1   MSDWRRDKALKKSS-----SPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKES 60
           MS+W  DKALK SS      P+YP S   NAAM LNLTNSF  LQR I  AVAP K KE 
Sbjct: 1   MSEWPCDKALKNSSPNSALPPTYPSSSHPNAAM-LNLTNSF--LQRRIPPAVAPAK-KEF 60

Query: 61  GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS 120
           GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS
Sbjct: 61  GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS 120

Query: 121 ALLVDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKS-AKGKKK 162
           ALL+DADQVEKFRKKFGELSQLMEIPVLKGEIILP+KRKS  KGKKK
Sbjct: 121 ALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK 163

[Close]
BLAST of Cmc04g0092801 vs. ExPASy Swiss-Prot
Match: Q9FWS4 (50S ribosomal protein L31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-45
Identity = 98/146 (67.12%), Postives = 117/146 (80.14%), Query Frame = 0 

Query: 28  MALNLTNSF---------LQLQRPISSAVAPPKHKESGARSHRPVV--TCRKKDLHPQFY 87
           MA++L NSF         LQL++P+ +AV     K+S  RS   VV  TCRKK+LHP+F+
Sbjct: 1   MAVSLPNSFLQISPCVPSLQLRKPVMAAV--KGGKQSVRRSSNTVVQITCRKKELHPEFH 60

Query: 88  EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQ 147
           EDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+VDADQVEKFRK+F  LS+
Sbjct: 61  EDAKVYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQVEKFRKRFAGLSE 120

Query: 148 LMEIPVLKGEIILPSKR-KSAKGKKK 162
           +MEIPVLKGEII+P+K+ K  KGKKK
Sbjct: 121 IMEIPVLKGEIIMPTKKSKGPKGKKK 144

[Close]
BLAST of Cmc04g0092801 vs. ExPASy Swiss-Prot
Match: P82249 (50S ribosomal protein L31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL31 PE=1 SV=2)

HSP 1 Score: 178.7 bits (452), Expect = 5.2e-44
Identity = 91/134 (67.91%), Postives = 106/134 (79.10%), Query Frame = 0 

Query: 28  MALNLTNSFLQLQRPISSAVAPPKHKESGARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 87
           M L L+N FL         +  PK   S   + RP  +CRK D+HP+F EDAKVYCNGEL
Sbjct: 1   MVLTLSNQFLAKIPATPKTLTLPKTSSS---TLRPQWSCRKSDIHPEFREDAKVYCNGEL 60

Query: 88  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 147
           VMTTGGTQK+Y+V+VWSGNHPFYLG+RSALL+DADQVEKFRKK+GEL+Q+MEIPVLKGEI
Sbjct: 61  VMTTGGTQKDYTVEVWSGNHPFYLGNRSALLLDADQVEKFRKKYGELTQIMEIPVLKGEI 120

Query: 148 ILPSKRKSAKGKKK 162
           ILP K+KS K KKK
Sbjct: 121 ILPPKKKS-KAKKK 130

[Close]
BLAST of Cmc04g0092801 vs. ExPASy Swiss-Prot
Match: Q7V9Y9 (50S ribosomal protein L31 OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) OX=167539 GN=rpmE PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.2e-17
Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 68  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF 127
           KKD+HP +Y DAKV CNGE+VMTTG TQ E  VDVWSGNHPF+ G++  L  +  +V++F
Sbjct: 3   KKDIHPNWYPDAKVICNGEVVMTTGSTQPEIHVDVWSGNHPFFTGTQKILDTEG-RVDRF 62

Query: 128 RKKFG 133
            +K+G
Sbjct: 63  MRKYG 66

[Close]
BLAST of Cmc04g0092801 vs. ExPASy Swiss-Prot
Match: Q31L35 (50S ribosomal protein L31 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rpmE PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.2e-17
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 0 

Query: 68  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEK 127
           K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+
Sbjct: 3   KADIHPQWYPEAKVYCNGEEVMTVGSTQPELHVDVWSGNHPFYTGTQK--IIDTEGRVER 62

Query: 128 FRKKFGEL 135
           F +K+G L
Sbjct: 63  FLRKYGML 68

[Close]
BLAST of Cmc04g0092801 vs. ExPASy Swiss-Prot
Match: Q5N0T7 (50S ribosomal protein L31 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rpmE PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.2e-17
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 0 

Query: 68  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEK 127
           K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+
Sbjct: 3   KADIHPQWYPEAKVYCNGEEVMTVGSTQPELHVDVWSGNHPFYTGTQK--IIDTEGRVER 62

Query: 128 FRKKFGEL 135
           F +K+G L
Sbjct: 63  FLRKYGML 68

[Close]
BLAST of Cmc04g0092801 vs. ExPASy TrEMBL
Match: E5GCI4 (50S ribosomal protein L31, chloroplastic OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 8.2e-85
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0 

Query: 1   MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKESGARSH 60
           MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPIS AVAPPKHKESGARSH
Sbjct: 1   MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISPAVAPPKHKESGARSH 60

Query: 61  RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD 120
           RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD
Sbjct: 61  RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD 120

Query: 121 ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 162
           ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Sbjct: 121 ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 161

[Close]
BLAST of Cmc04g0092801 vs. ExPASy TrEMBL
Match: A0A1S3CRJ2 (50S ribosomal protein L31, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503925 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 8.2e-85
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0 

Query: 1   MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKESGARSH 60
           MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPIS AVAPPKHKESGARSH
Sbjct: 1   MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISPAVAPPKHKESGARSH 60

Query: 61  RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD 120
           RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD
Sbjct: 61  RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD 120

Query: 121 ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 162
           ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Sbjct: 121 ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 161

[Close]
BLAST of Cmc04g0092801 vs. ExPASy TrEMBL
Match: A0A5A7TJN6 (50S ribosomal protein L31, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00310 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 8.5e-82
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 5   RRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKESGARSHRPVV 64
           RRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPIS AVAPPKHKESGARSHRPVV
Sbjct: 30  RRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISPAVAPPKHKESGARSHRPVV 89

Query: 65  TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQV 124
           TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQV
Sbjct: 90  TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQV 149

Query: 125 EKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 162
           EKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Sbjct: 150 EKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 186

[Close]
BLAST of Cmc04g0092801 vs. ExPASy TrEMBL
Match: A0A0A0LDC9 (50S ribosomal protein L31 OS=Cucumis sativus OX=3659 GN=Csa_3G859720 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.7e-67
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 0 

Query: 28  MALNLTNSFLQLQRPISSAVAPPKHKESGARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 87
           MALNLTNSFLQLQRPIS AVAPPK KESGARS+RPVVTCRKKDLHPQFYEDAKVYCNGEL
Sbjct: 1   MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGEL 60

Query: 88  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 147
           VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI
Sbjct: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120

Query: 148 ILPSKRKSAKGKKK 162
           ILPSKRKSAKGKKK
Sbjct: 121 ILPSKRKSAKGKKK 134

[Close]
BLAST of Cmc04g0092801 vs. ExPASy TrEMBL
Match: A0A6J1C3Q3 (50S ribosomal protein L31, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008063 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.1e-64
Identity = 139/167 (83.23%), Postives = 143/167 (85.63%), Query Frame = 0 

Query: 1   MSDWRRDKALKKSS-----SPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKES 60
           MS+W  DKALK SS      P+YP S   NAAM LNLTNSF  LQR I  AVAP K KE 
Sbjct: 1   MSEWPCDKALKNSSPNSALPPTYPSSSHPNAAM-LNLTNSF--LQRRIPPAVAPAK-KEF 60

Query: 61  GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS 120
           GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS
Sbjct: 61  GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS 120

Query: 121 ALLVDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKS-AKGKKK 162
           ALL+DADQVEKFRKKFGELSQLMEIPVLKGEIILP+KRKS  KGKKK
Sbjct: 121 ALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK 163

[Close]
BLAST of Cmc04g0092801 vs. TAIR 10
Match: AT1G75350.1 (Ribosomal protein L31 )

HSP 1 Score: 184.1 bits (466), Expect = 8.8e-47
Identity = 98/146 (67.12%), Postives = 117/146 (80.14%), Query Frame = 0 

Query: 28  MALNLTNSF---------LQLQRPISSAVAPPKHKESGARSHRPVV--TCRKKDLHPQFY 87
           MA++L NSF         LQL++P+ +AV     K+S  RS   VV  TCRKK+LHP+F+
Sbjct: 1   MAVSLPNSFLQISPCVPSLQLRKPVMAAV--KGGKQSVRRSSNTVVQITCRKKELHPEFH 60

Query: 88  EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQ 147
           EDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+VDADQVEKFRK+F  LS+
Sbjct: 61  EDAKVYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQVEKFRKRFAGLSE 120

Query: 148 LMEIPVLKGEIILPSKR-KSAKGKKK 162
           +MEIPVLKGEII+P+K+ K  KGKKK
Sbjct: 121 IMEIPVLKGEIIMPTKKSKGPKGKKK 144

The following BLAST results are available for this feature:
BLAST of Cmc04g0092801 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008466538.11.7e-8499.38PREDICTED: 50S ribosomal protein L31, chloroplastic [Cucumis melo] >ADN34183.1 5... [more]
KAA0041569.11.8e-8199.3650S ribosomal protein L31 [Cucumis melo var. makuwa][more]
XP_038896266.12.2e-7691.3050S ribosomal protein L31, chloroplastic [Benincasa hispida] >XP_038896267.1 50S... [more]
XP_004147854.25.5e-6797.7650S ribosomal protein L31, chloroplastic [Cucumis sativus] >KGN59985.1 hypotheti... [more]
XP_022136375.11.3e-6383.23LOW QUALITY PROTEIN: 50S ribosomal protein L31, chloroplastic [Momordica charant... [more]
BLAST of Cmc04g0092801 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FWS41.2e-4567.1250S ribosomal protein L31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL3... [more]
P822495.2e-4467.9150S ribosomal protein L31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL31 P... [more]
Q7V9Y94.2e-1758.4650S ribosomal protein L31 OS=Prochlorococcus marinus (strain SARG / CCMP1375 / S... [more]
Q31L354.2e-1758.8250S ribosomal protein L31 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-80... [more]
Q5N0T74.2e-1758.8250S ribosomal protein L31 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / S... [more]
BLAST of Cmc04g0092801 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
E5GCI48.2e-8599.3850S ribosomal protein L31, chloroplastic OS=Cucumis melo subsp. melo OX=412675 P... [more]
A0A1S3CRJ28.2e-8599.3850S ribosomal protein L31, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503925... [more]
A0A5A7TJN68.5e-8299.3650S ribosomal protein L31, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A0A0LDC92.7e-6797.7650S ribosomal protein L31 OS=Cucumis sativus OX=3659 GN=Csa_3G859720 PE=3 SV=1[more]
A0A6J1C3Q36.1e-6483.2350S ribosomal protein L31, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11... [more]
BLAST of Cmc04g0092801 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G75350.18.8e-4767.12Ribosomal protein L31 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002150Ribosomal protein L31PRINTSPR01249RIBOSOMALL31coord: 97..112
score: 49.69
coord: 68..85
score: 33.33
IPR002150Ribosomal protein L31PFAMPF01197Ribosomal_L31coord: 68..132
e-value: 1.1E-16
score: 60.7
IPR002150Ribosomal protein L31TIGRFAMTIGR00105TIGR00105coord: 68..133
e-value: 5.0E-15
score: 53.3
IPR002150Ribosomal protein L31PANTHERPTHR3328050S RIBOSOMAL PROTEIN L31, CHLOROPLASTICcoord: 28..161
IPR042105Ribosomal protein L31 superfamilyGENE3D4.10.830.30Ribosomal protein L31coord: 68..135
e-value: 3.6E-17
score: 64.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR33280:SF550S RIBOSOMAL PROTEIN L31coord: 28..161
IPR034704L28p-likeSUPERFAMILY143800L28p-likecoord: 68..134

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0092801.1Cmc04g0092801.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome