Cmc04g0092691 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0092691
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr04: 4702988 .. 4703890 (+)
RNA-Seq Expression	Cmc04g0092691
Synteny	Cmc04g0092691

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGATACTGTGATCAAATCCTATACTTTTGACCAAAACGTTGATGAACCTTGTGTATACAAGAAGATCAACAAAGGTAAAGTAGCTTTCTTAGTACTTTATATGGACAATATCGTCCTCATTGTGAATGATGTAGGATACCTAACAGACATTAAAACTTGGCTGCTAGCCCAATTCCAAATTAAAAATTTGGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGATAGCACTGTCTCAAACAACCTATATCGAAAAAATGTTGGTTAGATATTCGATGCAAAACTCTAAGAAGGGTTTATTACCTTTCAAGCATGAGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGAATATGAGACGTATTCCCTATGCCTTAGCTGTGGGTAGCTTAATGTATGATATGCTCTACACTAAGCCAAACATTTGTTATGCAGTAGGAATAGTCAGTAGGTATCAGTCCAATCCAGGGTTAGACCACTGGATGGCAGTTAAAATTATTCTCAAGTATCTTAGGAGAATGAGAGACTACATGCTTGTGTATGGACCTAAGGATTTGATCCTTATAGGATTGACTCTGATTTCCAAACCAATAAAGGATTCTAAAAAATCCACATCAGGATCAATGTTTACCCTAAACGGGAGAGTTGTGGTATGGCTTAGCATCAAGCAAGGATACATTACAGACTCTACTATGAAGGCTGAGTACGTTACTGCTTGTGAAGCAGCAAAAGAAGCAATTTGGCTCAGAAAATTCCTACATGATTTGGAAGTTGTTCTAAACGTGAACTTGCCCATCATTTTATATTGTGAAGACAGTGAGACAGTAGCCAATTCTAAAGAACCTCGCAGCCACAAATGA

mRNA sequence

ATGTTTGATACTGTGATCAAATCCTATACTTTTGACCAAAACGTTGATGAACCTTGTGTATACAAGAAGATCAACAAAGGTAAAGTAGCTTTCTTAGTACTTTATATGGACAATATCGTCCTCATTGTGAATGATGTAGGATACCTAACAGACATTAAAACTTGGCTGCTAGCCCAATTCCAAATTAAAAATTTGGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGATAGCACTGTCTCAAACAACCTATATCGAAAAAATGTTGGTTAGATATTCGATGCAAAACTCTAAGAAGGGTTTATTACCTTTCAAGCATGAGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGAATATGAGACGTATTCCCTATGCCTTAGCTGTGGGTAGCTTAATGTATGATATGCTCTACACTAAGCCAAACATTTGTTATGCAGTAGGAATAGTCAGTAGGTATCAGTCCAATCCAGGGTTAGACCACTGGATGGCAGTTAAAATTATTCTCAAGTATCTTAGGAGAATGAGAGACTACATGCTTGTGTATGGACCTAAGGATTTGATCCTTATAGGATTGACTCTGATTTCCAAACCAATAAAGGATTCTAAAAAATCCACATCAGGATCAATGTTTACCCTAAACGGGAGAGTTGTGGTATGGCTTAGCATCAAGCAAGGATACATTACAGACTCTACTATGAAGGCTGAGTACGTTACTGCTTGTGAAGCAGCAAAAGAAGCAATTTGGCTCAGAAAATTCCTACATGATTTGGAAGTTGTTCTAAACGTGAACTTGCCCATCATTTTATATTGTGAAGACAGTGAGACAGTAGCCAATTCTAAAGAACCTCGCAGCCACAAATGA

Coding sequence (CDS)

ATGTTTGATACTGTGATCAAATCCTATACTTTTGACCAAAACGTTGATGAACCTTGTGTATACAAGAAGATCAACAAAGGTAAAGTAGCTTTCTTAGTACTTTATATGGACAATATCGTCCTCATTGTGAATGATGTAGGATACCTAACAGACATTAAAACTTGGCTGCTAGCCCAATTCCAAATTAAAAATTTGGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGATAGCACTGTCTCAAACAACCTATATCGAAAAAATGTTGGTTAGATATTCGATGCAAAACTCTAAGAAGGGTTTATTACCTTTCAAGCATGAGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGAATATGAGACGTATTCCCTATGCCTTAGCTGTGGGTAGCTTAATGTATGATATGCTCTACACTAAGCCAAACATTTGTTATGCAGTAGGAATAGTCAGTAGGTATCAGTCCAATCCAGGGTTAGACCACTGGATGGCAGTTAAAATTATTCTCAAGTATCTTAGGAGAATGAGAGACTACATGCTTGTGTATGGACCTAAGGATTTGATCCTTATAGGATTGACTCTGATTTCCAAACCAATAAAGGATTCTAAAAAATCCACATCAGGATCAATGTTTACCCTAAACGGGAGAGTTGTGGTATGGCTTAGCATCAAGCAAGGATACATTACAGACTCTACTATGAAGGCTGAGTACGTTACTGCTTGTGAAGCAGCAAAAGAAGCAATTTGGCTCAGAAAATTCCTACATGATTTGGAAGTTGTTCTAAACGTGAACTTGCCCATCATTTTATATTGTGAAGACAGTGAGACAGTAGCCAATTCTAAAGAACCTCGCAGCCACAAATGA

Protein sequence

MFDTVIKSYTFDQNVDEPCVYKKINKGKVAFLVLYMDNIVLIVNDVGYLTDIKTWLLAQFQIKNLGEAQYVLGIQIIRDRKNKTIALSQTTYIEKMLVRYSMQNSKKGLLPFKHEVHLSKEQCPKTPQEVENMRRIPYALAVGSLMYDMLYTKPNICYAVGIVSRYQSNPGLDHWMAVKIILKYLRRMRDYMLVYGPKDLILIGLTLISKPIKDSKKSTSGSMFTLNGRVVVWLSIKQGYITDSTMKAEYVTACEAAKEAIWLRKFLHDLEVVLNVNLPIILYCEDSETVANSKEPRSHK

Homology

[Close]

BLAST of Cmc04g0092691 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 490.3 bits (1261), Expect = 1.1e-134
Identity = 246/300 (82.00%), Postives = 268/300 (89.33%), Query Frame = 0


Query: 2    FDTVIKSYTFDQNVDEPCVYKKINKGKVAFLVLYMDNIVLIVNDVGYLTDIKTWLLAQFQ 61
            FDT IKSY FDQNVDEPCVYKKINKGKVAFLVLY+D+I+LI NDVGYLTD+K WL AQFQ
Sbjct: 876  FDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQ 935

Query: 62   IKNLGEAQYVLGIQIIRDRKNKTIALSQTTYIEKMLVRYSMQNSKKGLLPFKHEVHLSKE 121
            +K+LGEAQYVLGIQIIRDRKNKT+ALSQ TYI+K+LVRYSMQNSKKGLLPF+H VHLSKE
Sbjct: 936  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 995

Query: 122  QCPKTPQEVENMRRIPYALAVGSLMYDMLYTKPNICYAVGIVSRYQSNPGLDHWMAVKII 181
            Q PKTPQEVE+MRRIPYA AVGSLMY ML T+P+ICYAVGIVSRYQSNPGLDHW AVKI+
Sbjct: 996  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 1055

Query: 182  LKYLRRMRDYMLVYGPKDLILIGLTLIS-KPIKDSKKSTSGSMFTLNGRVVVWLSIKQGY 241
            LKYLRR RDYMLVYG KDLIL G T    +  KDS+KSTSGS+FTLNG  VVW SIKQG 
Sbjct: 1056 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 1115

Query: 242  ITDSTMKAEYVTACEAAKEAIWLRKFLHDLEVVLNVNLPIILYCEDSETVANSKEPRSHK 301
            I DSTM+AEYV ACEAAKEA+WLRKFLHDLEVV N+NLPI LYC++S  VANSKEPRSHK
Sbjct: 1116 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1175

[Close]

BLAST of Cmc04g0092691 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 490.3 bits (1261), Expect = 1.1e-134
Identity = 246/300 (82.00%), Postives = 268/300 (89.33%), Query Frame = 0


Query: 2    FDTVIKSYTFDQNVDEPCVYKKINKGKVAFLVLYMDNIVLIVNDVGYLTDIKTWLLAQFQ 61
            FDT IKSY FDQNVDEPCVYKKINKGKVAFLVLY+D+I+LI NDVGYLTD+K WL AQFQ
Sbjct: 750  FDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQ 809

Query: 62   IKNLGEAQYVLGIQIIRDRKNKTIALSQTTYIEKMLVRYSMQNSKKGLLPFKHEVHLSKE 121
            +K+LGEAQYVLGIQIIRDRKNKT+ALSQ TYI+K+LVRYSMQNSKKGLLPF+H VHLSKE
Sbjct: 810  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 869

Query: 122  QCPKTPQEVENMRRIPYALAVGSLMYDMLYTKPNICYAVGIVSRYQSNPGLDHWMAVKII 181
            Q PKTPQEVE+MRRIPYA AVGSLMY ML T+P+ICYAVGIVSRYQSNPGLDHW AVKI+
Sbjct: 870  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 929

Query: 182  LKYLRRMRDYMLVYGPKDLILIGLTLIS-KPIKDSKKSTSGSMFTLNGRVVVWLSIKQGY 241
            LKYLRR RDYMLVYG KDLIL G T    +  KDS+KSTSGS+FTLNG  VVW SIKQG 
Sbjct: 930  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 989

Query: 242  ITDSTMKAEYVTACEAAKEAIWLRKFLHDLEVVLNVNLPIILYCEDSETVANSKEPRSHK 301
            I DSTM+AEYV ACEAAKEA+WLRKFLHDLEVV N+NLPI LYC++S  VANSKEPRSHK
Sbjct: 990  IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1049

[Close]

BLAST of Cmc04g0092691 vs. NCBI nr
Match: KAA0043583.1 (putative Integrase core domain [Cucumis melo var. makuwa])

HSP 1 Score: 490.0 bits (1260), Expect = 1.5e-134
Identity = 244/300 (81.33%), Postives = 268/300 (89.33%), Query Frame = 0


Query: 2   FDTVIKSYTFDQNVDEPCVYKKINKGKVAFLVLYMDNIVLIVNDVGYLTDIKTWLLAQFQ 61
           FDTVIKSY+FDQNVDEPC+YKKINKGKVAFLVLY+D+I+LI NDVGYLTD+K WL A+FQ
Sbjct: 551 FDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAKFQ 610

Query: 62  IKNLGEAQYVLGIQIIRDRKNKTIALSQTTYIEKMLVRYSMQNSKKGLLPFKHEVHLSKE 121
           +K+LGEAQYVLGIQIIRDRKNKT+ALSQ TYI+KMLVRYSMQNSKKGLLPF+H VHLSKE
Sbjct: 611 MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKE 670

Query: 122 QCPKTPQEVENMRRIPYALAVGSLMYDMLYTKPNICYAVGIVSRYQSNPGLDHWMAVKII 181
           QCPKTPQEVE+MRRIPYA  VGSLMY MLYT+P+ICYAVGIVSRYQSNPGLDHW AVKII
Sbjct: 671 QCPKTPQEVEDMRRIPYASVVGSLMYVMLYTRPDICYAVGIVSRYQSNPGLDHWTAVKII 730

Query: 182 LKYLRRMRDYMLVYGPKDLILIGLTLIS-KPIKDSKKSTSGSMFTLNGRVVVWLSIKQGY 241
           LKYLRR RDYMLVY  KDLIL G T    +  KD +KSTSGS+FTLNG  +VW SIKQG 
Sbjct: 731 LKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGC 790

Query: 242 ITDSTMKAEYVTACEAAKEAIWLRKFLHDLEVVLNVNLPIILYCEDSETVANSKEPRSHK 301
           I DSTM+AEYV  CEAAKEA+WLRKFLHDLEVV N+NLPI LYC++S  VANSKEPRSHK
Sbjct: 791 IADSTMEAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 850

[Close]

BLAST of Cmc04g0092691 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 485.3 bits (1248), Expect = 3.7e-133
Identity = 244/300 (81.33%), Postives = 266/300 (88.67%), Query Frame = 0


Query: 2    FDTVIKSYTFDQNVDEPCVYKKINKGKVAFLVLYMDNIVLIVNDVGYLTDIKTWLLAQFQ 61
            FDT IKSY FDQNVDEPCVYKKINKGKVAFLVLY+D+I+LI NDVGYLTD+K WL AQFQ
Sbjct: 876  FDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQ 935

Query: 62   IKNLGEAQYVLGIQIIRDRKNKTIALSQTTYIEKMLVRYSMQNSKKGLLPFKHEVHLSKE 121
            +K+LGE QYVLGIQIIRDRKNKT+ALSQ TYI+K+LVRYSMQNSKKGLLPF+H VHLSKE
Sbjct: 936  MKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 995

Query: 122  QCPKTPQEVENMRRIPYALAVGSLMYDMLYTKPNICYAVGIVSRYQSNPGLDHWMAVKII 181
            Q PKTPQEVE+MRRIPYA AVGSLMY ML T+P+ICYAVGIVSRYQSNPGLDHW AVKII
Sbjct: 996  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKII 1055

Query: 182  LKYLRRMRDYMLVYGPKDLILIGLTLIS-KPIKDSKKSTSGSMFTLNGRVVVWLSIKQGY 241
            LKYLRR RDYMLVYG KDLIL G T    +  KDS+KSTS S+FTLNG  VVW SIKQG 
Sbjct: 1056 LKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGC 1115

Query: 242  ITDSTMKAEYVTACEAAKEAIWLRKFLHDLEVVLNVNLPIILYCEDSETVANSKEPRSHK 301
            I DSTM+AEYV ACEAAKEA+WL+KFLHDLEVV N+NLPI LYC++S  VANSKEPRSHK
Sbjct: 1116 IADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1175

[Close]

BLAST of Cmc04g0092691 vs. NCBI nr
Match: KAA0050437.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 485.0 bits (1247), Expect = 4.8e-133
Identity = 244/300 (81.33%), Postives = 264/300 (88.00%), Query Frame = 0


Query: 2   FDTVIKSYTFDQNVDEPCVYKKINKGKVAFLVLYMDNIVLIVNDVGYLTDIKTWLLAQFQ 61
           FDT IK Y FDQNVDEPCVYKKINKGKVAFLVLY+D+I+LI ND+GYLTD+K WL AQFQ
Sbjct: 562 FDTAIKCYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDMGYLTDVKAWLAAQFQ 621

Query: 62  IKNLGEAQYVLGIQIIRDRKNKTIALSQTTYIEKMLVRYSMQNSKKGLLPFKHEVHLSKE 121
           +K+LGEAQYVLGIQIIRDRKNK +ALSQ TYI+KMLVRYSMQNSKKGLLPF+H VHLSKE
Sbjct: 622 MKDLGEAQYVLGIQIIRDRKNKILALSQVTYIDKMLVRYSMQNSKKGLLPFRHGVHLSKE 681

Query: 122 QCPKTPQEVENMRRIPYALAVGSLMYDMLYTKPNICYAVGIVSRYQSNPGLDHWMAVKII 181
           QC KTPQEVE+MRRIPYA AVGSLMY ML T+P ICYAVGIVSRYQSNPGLDHW AVKII
Sbjct: 682 QCSKTPQEVEDMRRIPYASAVGSLMYVMLCTRPEICYAVGIVSRYQSNPGLDHWTAVKII 741

Query: 182 LKYLRRMRDYMLVYGPKDLILIGLTLIS-KPIKDSKKSTSGSMFTLNGRVVVWLSIKQGY 241
           LKYLRR RDYMLVYG KDLIL G T    +  KDS+KSTSGS+FTLNG VVVW SIKQG 
Sbjct: 742 LKYLRRTRDYMLVYGAKDLILTGYTDFDFQTDKDSRKSTSGSVFTLNGGVVVWRSIKQGC 801

Query: 242 ITDSTMKAEYVTACEAAKEAIWLRKFLHDLEVVLNVNLPIILYCEDSETVANSKEPRSHK 301
           I D TM+AEYV ACEAAKEA+WLRKFLHDLEVV N+NLPI LYC++S  VAN KEPRSHK
Sbjct: 802 IADCTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANCKEPRSHK 861

[Close]

BLAST of Cmc04g0092691 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.6e-57
Identity = 119/300 (39.67%), Postives = 185/300 (61.67%), Query Frame = 0


Query: 2    FDTVIKSYTFDQNVDEPCVY-KKINKGKVAFLVLYMDNIVLIVNDVGYLTDIKTWLLAQF 61
            FD+ +KS T+ +   +PCVY K+ ++     L+LY+D+++++  D G +  +K  L   F
Sbjct: 974  FDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSF 1033

Query: 62   QIKNLGEAQYVLGIQIIRDRKNKTIALSQTTYIEKMLVRYSMQNSKKGLLPFKHEVHLSK 121
             +K+LG AQ +LG++I+R+R ++ + LSQ  YIE++L R++M+N+K    P    + LSK
Sbjct: 1034 DMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSK 1093

Query: 122  EQCPKTPQEVENMRRIPYALAVGSLMYDMLYTKPNICYAVGIVSRYQSNPGLDHWMAVKI 181
            + CP T +E  NM ++PY+ AVGSLMY M+ T+P+I +AVG+VSR+  NPG +HW AVK 
Sbjct: 1094 KMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKW 1153

Query: 182  ILKYLRRMRDYMLVYGPKDLILIGLTLISKPIK-DSKKSTSGSMFTLNGRVVVWLSIKQG 241
            IL+YLR      L +G  D IL G T        D++KS++G +FT +G  + W S  Q 
Sbjct: 1154 ILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQK 1213

Query: 242  YITDSTMKAEYVTACEAAKEAIWLRKFLHDLEVVLNVNLPIILYCEDSETVANSKEPRSH 300
             +  ST +AEY+ A E  KE IWL++FL +L +        ++YC+    +  SK    H
Sbjct: 1214 CVALSTTEAEYIAATETGKEMIWLKRFLQELGL---HQKEYVVYCDSQSAIDLSKNSMYH 1270

[Close]

BLAST of Cmc04g0092691 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 125.6 bits (314), Expect = 9.7e-28
Identity = 85/313 (27.16%), Postives = 162/313 (51.76%), Query Frame = 0


Query: 1    MFDTVIKSYTFDQNVDEPCVY--KKINKGKVAFLVLYMDNIVLIVNDVGYLTDIKTWLLA 60
            +F+  +K   F  +  + C+Y   K N  +  +++LY+D++V+   D+  + + K +L+ 
Sbjct: 1051 VFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLME 1110

Query: 61   QFQIKNLGEAQYVLGIQIIRDRKNKTIALSQTTYIEKMLVRYSMQNSKKGLLP----FKH 120
            +F++ +L E ++ +GI+I  + +   I LSQ+ Y++K+L +++M+N      P      +
Sbjct: 1111 KFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINY 1170

Query: 121  EVHLSKEQCPKTPQEVENMRRIPYALAVGSLMYDMLYTKPNICYAVGIVSRYQSNPGLDH 180
            E+  S E C             P    +G LMY ML T+P++  AV I+SRY S    + 
Sbjct: 1171 ELLNSDEDC-----------NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSEL 1230

Query: 181  WMAVKIILKYLRRMRDYMLVYGPKDLILIGLTLISKPIKD------SKKSTSGSMFTL-N 240
            W  +K +L+YL+   D  L++  K  +     +I     D       +KST+G +F + +
Sbjct: 1231 WQNLKRVLRYLKGTIDMKLIF--KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFD 1290

Query: 241  GRVVVWLSIKQGYITDSTMKAEYVTACEAAKEAIWLRKFLHDLEVVLNVNLPIILYCEDS 300
              ++ W + +Q  +  S+ +AEY+   EA +EA+WL+  L  + + L    PI +Y ++ 
Sbjct: 1291 FNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKL--ENPIKIYEDNQ 1346

[Close]

BLAST of Cmc04g0092691 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.8e-18
Identity = 76/292 (26.03%), Postives = 132/292 (45.21%), Query Frame = 0


Query: 4    TVIKSYTFDQNVDEPCVYKKINKGKVAFLVLYMDNIVLIVNDVGYLTDIKTWLLAQFQIK 63
            T + +  F  ++ +  ++       + ++++Y+D+I++  ND   L      L  +F +K
Sbjct: 1102 TYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVK 1161

Query: 64   NLGEAQYVLGIQIIRDRKNKTIALSQTTYIEKMLVRYSMQNSKKGLLPFKHEVHLSKEQC 123
               +  Y LGI+    R  + + LSQ  Y   +L R +M  +K    P      L+    
Sbjct: 1162 EHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSG 1221

Query: 124  PKTPQEVENMRRIPYALAVGSLMYDMLYTKPNICYAVGIVSRYQSNPGLDHWMAVKIILK 183
             K P   E      Y   VGSL Y + +T+P++ YAV  +S+Y   P  DHW A+K +L+
Sbjct: 1222 TKLPDPTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLR 1281

Query: 184  YLRRMRDY---------MLVYGPKDLILIGLTLISKPIKDSKKSTSGSMFTLNGRVVVWL 243
            YL    D+         + ++   D    G T       D   ST+G +  L    + W 
Sbjct: 1282 YLAGTPDHGIFLKKGNTLSLHAYSDADWAGDT-------DDYVSTNGYIVYLGHHPISWS 1341

Query: 244  SIKQGYITDSTMKAEYVTACEAAKEAIWLRKFLHDLEVVLNVNLPIILYCED 287
            S KQ  +  S+ +AEY +    + E  W+   L +L + L  + P ++YC++
Sbjct: 1342 SKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQL--SHPPVIYCDN 1375

[Close]

BLAST of Cmc04g0092691 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.8e-18
Identity = 51/134 (38.06%), Postives = 83/134 (61.94%), Query Frame = 0


Query: 133 MRRIPYALAVGSLMYDMLYTKPNICYAVGIVSRYQSNPGLDHWMAVKIILKYLRRMRDYM 192
           M+ +PY  AVG++MY M+ T+P++  AVG++S++ S+P   HW A+K +L+YL+  + Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 193 LVY---GPKDLILIGLTLISKPIKDSKKSTSGSMFTLNGRVVVWLSIKQGYITDSTMKAE 252
           L +   G   L+       +  + +S++STSG +F LNG  V W S KQ  +  S+ + E
Sbjct: 61  LEFTRAGTAKLVGYSDADWAGDV-ESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDE 120

Query: 253 YVTACEAAKEAIWL 264
           Y+   EA +EA+WL
Sbjct: 121 YMALSEATQEAVWL 133

[Close]

BLAST of Cmc04g0092691 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.8e-16
Identity = 73/266 (27.44%), Postives = 126/266 (47.37%), Query Frame = 0


Query: 24   INKGK-VAFLVLYMDNIVLIVNDVGYLTDIKTWLLAQFQIKNLGEAQYVLGIQIIRDRKN 83
            + +GK + ++++Y+D+I++  ND   L +    L  +F +K+  E  Y LGI+    R  
Sbjct: 1138 LQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE--AKRVP 1197

Query: 84   KTIALSQTTYIEKMLVRYSMQNSKKGLLPFKHEVHLSKEQCPKTPQEVENMRRIPYALAV 143
              + LSQ  YI  +L R +M  +K    P      LS     K     E      Y   V
Sbjct: 1198 TGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE------YRGIV 1257

Query: 144  GSLMYDMLYTKPNICYAVGIVSRYQSNPGLDHWMAVKIILKYLRRMRDYMLVYGPKDLIL 203
            GSL Y + +T+P+I YAV  +S++   P  +H  A+K IL+YL    ++ +     + + 
Sbjct: 1258 GSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLS 1317

Query: 204  IGLTLIS--KPIKDSKKSTSGSMFTLNGRVVVWLSIKQGYITDSTMKAEYVTACEAAKEA 263
            +     +     KD   ST+G +  L    + W S KQ  +  S+ +AEY +    + E 
Sbjct: 1318 LHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEM 1377

Query: 264  IWLRKFLHDLEVVLNVNLPIILYCED 287
             W+   L +L +   +  P ++YC++
Sbjct: 1378 QWICSLLTELGI--RLTRPPVIYCDN 1392

[Close]

BLAST of Cmc04g0092691 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 5.6e-135
Identity = 246/300 (82.00%), Postives = 268/300 (89.33%), Query Frame = 0


Query: 2    FDTVIKSYTFDQNVDEPCVYKKINKGKVAFLVLYMDNIVLIVNDVGYLTDIKTWLLAQFQ 61
            FDT IKSY FDQNVDEPCVYKKINKGKVAFLVLY+D+I+LI NDVGYLTD+K WL AQFQ
Sbjct: 876  FDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQ 935

Query: 62   IKNLGEAQYVLGIQIIRDRKNKTIALSQTTYIEKMLVRYSMQNSKKGLLPFKHEVHLSKE 121
            +K+LGEAQYVLGIQIIRDRKNKT+ALSQ TYI+K+LVRYSMQNSKKGLLPF+H VHLSKE
Sbjct: 936  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 995

Query: 122  QCPKTPQEVENMRRIPYALAVGSLMYDMLYTKPNICYAVGIVSRYQSNPGLDHWMAVKII 181
            Q PKTPQEVE+MRRIPYA AVGSLMY ML T+P+ICYAVGIVSRYQSNPGLDHW AVKI+
Sbjct: 996  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 1055

Query: 182  LKYLRRMRDYMLVYGPKDLILIGLTLIS-KPIKDSKKSTSGSMFTLNGRVVVWLSIKQGY 241
            LKYLRR RDYMLVYG KDLIL G T    +  KDS+KSTSGS+FTLNG  VVW SIKQG 
Sbjct: 1056 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 1115

Query: 242  ITDSTMKAEYVTACEAAKEAIWLRKFLHDLEVVLNVNLPIILYCEDSETVANSKEPRSHK 301
            I DSTM+AEYV ACEAAKEA+WLRKFLHDLEVV N+NLPI LYC++S  VANSKEPRSHK
Sbjct: 1116 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1175

[Close]

BLAST of Cmc04g0092691 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 5.6e-135
Identity = 246/300 (82.00%), Postives = 268/300 (89.33%), Query Frame = 0


Query: 2    FDTVIKSYTFDQNVDEPCVYKKINKGKVAFLVLYMDNIVLIVNDVGYLTDIKTWLLAQFQ 61
            FDT IKSY FDQNVDEPCVYKKINKGKVAFLVLY+D+I+LI NDVGYLTD+K WL AQFQ
Sbjct: 750  FDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQ 809

Query: 62   IKNLGEAQYVLGIQIIRDRKNKTIALSQTTYIEKMLVRYSMQNSKKGLLPFKHEVHLSKE 121
            +K+LGEAQYVLGIQIIRDRKNKT+ALSQ TYI+K+LVRYSMQNSKKGLLPF+H VHLSKE
Sbjct: 810  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 869

Query: 122  QCPKTPQEVENMRRIPYALAVGSLMYDMLYTKPNICYAVGIVSRYQSNPGLDHWMAVKII 181
            Q PKTPQEVE+MRRIPYA AVGSLMY ML T+P+ICYAVGIVSRYQSNPGLDHW AVKI+
Sbjct: 870  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 929

Query: 182  LKYLRRMRDYMLVYGPKDLILIGLTLIS-KPIKDSKKSTSGSMFTLNGRVVVWLSIKQGY 241
            LKYLRR RDYMLVYG KDLIL G T    +  KDS+KSTSGS+FTLNG  VVW SIKQG 
Sbjct: 930  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 989

Query: 242  ITDSTMKAEYVTACEAAKEAIWLRKFLHDLEVVLNVNLPIILYCEDSETVANSKEPRSHK 301
            I DSTM+AEYV ACEAAKEA+WLRKFLHDLEVV N+NLPI LYC++S  VANSKEPRSHK
Sbjct: 990  IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1049

[Close]

BLAST of Cmc04g0092691 vs. ExPASy TrEMBL
Match: A0A5A7TJH9 (Putative Integrase core domain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G00110 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 7.3e-135
Identity = 244/300 (81.33%), Postives = 268/300 (89.33%), Query Frame = 0


Query: 2   FDTVIKSYTFDQNVDEPCVYKKINKGKVAFLVLYMDNIVLIVNDVGYLTDIKTWLLAQFQ 61
           FDTVIKSY+FDQNVDEPC+YKKINKGKVAFLVLY+D+I+LI NDVGYLTD+K WL A+FQ
Sbjct: 551 FDTVIKSYSFDQNVDEPCIYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAKFQ 610

Query: 62  IKNLGEAQYVLGIQIIRDRKNKTIALSQTTYIEKMLVRYSMQNSKKGLLPFKHEVHLSKE 121
           +K+LGEAQYVLGIQIIRDRKNKT+ALSQ TYI+KMLVRYSMQNSKKGLLPF+H VHLSKE
Sbjct: 611 MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKE 670

Query: 122 QCPKTPQEVENMRRIPYALAVGSLMYDMLYTKPNICYAVGIVSRYQSNPGLDHWMAVKII 181
           QCPKTPQEVE+MRRIPYA  VGSLMY MLYT+P+ICYAVGIVSRYQSNPGLDHW AVKII
Sbjct: 671 QCPKTPQEVEDMRRIPYASVVGSLMYVMLYTRPDICYAVGIVSRYQSNPGLDHWTAVKII 730

Query: 182 LKYLRRMRDYMLVYGPKDLILIGLTLIS-KPIKDSKKSTSGSMFTLNGRVVVWLSIKQGY 241
           LKYLRR RDYMLVY  KDLIL G T    +  KD +KSTSGS+FTLNG  +VW SIKQG 
Sbjct: 731 LKYLRRTRDYMLVYEAKDLILTGYTDSDFQTDKDHRKSTSGSVFTLNGGALVWHSIKQGC 790

Query: 242 ITDSTMKAEYVTACEAAKEAIWLRKFLHDLEVVLNVNLPIILYCEDSETVANSKEPRSHK 301
           I DSTM+AEYV  CEAAKEA+WLRKFLHDLEVV N+NLPI LYC++S  VANSKEPRSHK
Sbjct: 791 IADSTMEAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 850

[Close]

BLAST of Cmc04g0092691 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.8e-133
Identity = 244/300 (81.33%), Postives = 266/300 (88.67%), Query Frame = 0


Query: 2    FDTVIKSYTFDQNVDEPCVYKKINKGKVAFLVLYMDNIVLIVNDVGYLTDIKTWLLAQFQ 61
            FDT IKSY FDQNVDEPCVYKKINKGKVAFLVLY+D+I+LI NDVGYLTD+K WL AQFQ
Sbjct: 876  FDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQ 935

Query: 62   IKNLGEAQYVLGIQIIRDRKNKTIALSQTTYIEKMLVRYSMQNSKKGLLPFKHEVHLSKE 121
            +K+LGE QYVLGIQIIRDRKNKT+ALSQ TYI+K+LVRYSMQNSKKGLLPF+H VHLSKE
Sbjct: 936  MKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 995

Query: 122  QCPKTPQEVENMRRIPYALAVGSLMYDMLYTKPNICYAVGIVSRYQSNPGLDHWMAVKII 181
            Q PKTPQEVE+MRRIPYA AVGSLMY ML T+P+ICYAVGIVSRYQSNPGLDHW AVKII
Sbjct: 996  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKII 1055

Query: 182  LKYLRRMRDYMLVYGPKDLILIGLTLIS-KPIKDSKKSTSGSMFTLNGRVVVWLSIKQGY 241
            LKYLRR RDYMLVYG KDLIL G T    +  KDS+KSTS S+FTLNG  VVW SIKQG 
Sbjct: 1056 LKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGC 1115

Query: 242  ITDSTMKAEYVTACEAAKEAIWLRKFLHDLEVVLNVNLPIILYCEDSETVANSKEPRSHK 301
            I DSTM+AEYV ACEAAKEA+WL+KFLHDLEVV N+NLPI LYC++S  VANSKEPRSHK
Sbjct: 1116 IADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1175

[Close]

BLAST of Cmc04g0092691 vs. ExPASy TrEMBL
Match: A0A5A7U7T0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00310 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.3e-133
Identity = 244/300 (81.33%), Postives = 264/300 (88.00%), Query Frame = 0


Query: 2   FDTVIKSYTFDQNVDEPCVYKKINKGKVAFLVLYMDNIVLIVNDVGYLTDIKTWLLAQFQ 61
           FDT IK Y FDQNVDEPCVYKKINKGKVAFLVLY+D+I+LI ND+GYLTD+K WL AQFQ
Sbjct: 562 FDTAIKCYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDMGYLTDVKAWLAAQFQ 621

Query: 62  IKNLGEAQYVLGIQIIRDRKNKTIALSQTTYIEKMLVRYSMQNSKKGLLPFKHEVHLSKE 121
           +K+LGEAQYVLGIQIIRDRKNK +ALSQ TYI+KMLVRYSMQNSKKGLLPF+H VHLSKE
Sbjct: 622 MKDLGEAQYVLGIQIIRDRKNKILALSQVTYIDKMLVRYSMQNSKKGLLPFRHGVHLSKE 681

Query: 122 QCPKTPQEVENMRRIPYALAVGSLMYDMLYTKPNICYAVGIVSRYQSNPGLDHWMAVKII 181
           QC KTPQEVE+MRRIPYA AVGSLMY ML T+P ICYAVGIVSRYQSNPGLDHW AVKII
Sbjct: 682 QCSKTPQEVEDMRRIPYASAVGSLMYVMLCTRPEICYAVGIVSRYQSNPGLDHWTAVKII 741

Query: 182 LKYLRRMRDYMLVYGPKDLILIGLTLIS-KPIKDSKKSTSGSMFTLNGRVVVWLSIKQGY 241
           LKYLRR RDYMLVYG KDLIL G T    +  KDS+KSTSGS+FTLNG VVVW SIKQG 
Sbjct: 742 LKYLRRTRDYMLVYGAKDLILTGYTDFDFQTDKDSRKSTSGSVFTLNGGVVVWRSIKQGC 801

Query: 242 ITDSTMKAEYVTACEAAKEAIWLRKFLHDLEVVLNVNLPIILYCEDSETVANSKEPRSHK 301
           I D TM+AEYV ACEAAKEA+WLRKFLHDLEVV N+NLPI LYC++S  VAN KEPRSHK
Sbjct: 802 IADCTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANCKEPRSHK 861

[Close]

BLAST of Cmc04g0092691 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 93.2 bits (230), Expect = 3.8e-19
Identity = 71/291 (24.40%), Postives = 139/291 (47.77%), Query Frame = 0


Query: 2   FDTVIKSYTFDQNVDEPCVYKKINKGKVAFLVLYMDNIVLIVNDVGYLTDIKTWLLAQFQ 61
           F   +  + F Q+  +   + KI       +++Y+D+I++  N+   + ++K+ L + F+
Sbjct: 250 FSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFK 309

Query: 62  IKNLGEAQYVLGIQIIRDRKNKTIALSQTTYIEKMLVRYSMQNSKKGLLPFKHEVHLSKE 121
           +++LG  +Y LG++I R      I + Q  Y   +L    +   K   +P    V  S  
Sbjct: 310 LRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 369

Query: 122 QCPKTPQEVENMRRIPYALAVGSLMYDMLYTKPNICYAVGIVSRYQSNPGLDHWMAVKII 181
                    + +    Y   +G LMY +  T+ +I +AV  +S++   P L H  AV  I
Sbjct: 370 ------SGGDFVDAKAYRRLIGRLMY-LQITRLDISFAVNKLSQFSEAPRLAHQQAVMKI 429

Query: 182 LKYLRRMRDYMLVYGPKDLILIGL--TLISKPIKDSKKSTSGSMFTLNGRVVVWLSIKQG 241
           L Y++      L Y  +  + + +      +  KD+++ST+G    L   ++ W S KQ 
Sbjct: 430 LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 489

Query: 242 YITDSTMKAEYVTACEAAKEAIWLRKFLHDLEVVLNVNLPIILYCEDSETV 291
            ++ S+ +AEY     A  E +WL +F  +L+  L ++ P +L+C+++  +
Sbjct: 490 VVSKSSAEAEYRALSFATDEMMWLAQFFRELQ--LPLSKPTLLFCDNTAAI 529

[Close]

BLAST of Cmc04g0092691 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-11
Identity = 65/236 (27.54%), Postives = 109/236 (46.19%), Query Frame = 0


Query: 31  FLVLYMDNIVLIVNDVGYLTDIKTWLLAQFQIKNLGEAQYVLGIQIIRDRKNKTIALSQT 90
           +L+LY+D+I+L  +    L  +   L + F +K+LG   Y LGIQI        + LSQT
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQT 61

Query: 91  TYIEKMLVRYSMQNSK--KGLLPFKHEVHLSKEQCPKTPQEVENMRRIPYALAVGSLMYD 150
            Y E++L    M + K     LP K    +S  + P    +  + R I     VG+L Y 
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP----DPSDFRSI-----VGALQY- 121

Query: 151 MLYTKPNICYAVGIVSRYQSNPGLDHWMAVKIILKYLRRMRDYMLVYGPKDLILIGLTLI 210
           +  T+P+I YAV IV +    P L  +  +K +L+Y++    + L       + +     
Sbjct: 122 LTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181

Query: 211 S--KPIKDSKKSTSGSMFTLNGRVVVWLSIKQGYITDSTMKAEYVTACEAAKEAIW 263
           S       +++ST+G    L   ++ W + +Q  ++ S+ + EY      A E  W
Sbjct: 182 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

The following BLAST results are available for this feature:

BLAST of Cmc04g0092691 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025945.1	1.1e-134	82.00	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	1.1e-134	82.00	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0043583.1	1.5e-134	81.33	putative Integrase core domain [Cucumis melo var. makuwa]	[more]
KAA0035907.1	3.7e-133	81.33	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0050437.1	4.8e-133	81.33	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0092691 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.6e-57	39.67	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	9.7e-28	27.16	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	1.8e-18	26.03	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P0CV72	1.8e-18	38.06	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
Q94HW2	3.8e-16	27.44	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]

BLAST of Cmc04g0092691 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZD0	5.6e-135	82.00	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7UYE8	5.6e-135	82.00	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7TJH9	7.3e-135	81.33	Putative Integrase core domain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5A7T2V9	1.8e-133	81.33	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]
A0A5A7U7T0	2.3e-133	81.33	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G0031...	[more]

BLAST of Cmc04g0092691 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.8e-19	24.40	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.2e-11	27.54	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 3..111 e-value: 2.8E-12 score: 46.8
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 2..199
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 213..300 e-value: 7.99506E-25 score: 95.2277

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0092691.1	Cmc04g0092691.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding