Cmc04g0092671 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0092671
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTTF-type domain-containing protein
LocationCMiso1.1chr04: 4632417 .. 4633010 (-)
RNA-Seq ExpressionCmc04g0092671
SyntenyCmc04g0092671
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAATCAAACAAGAATTGACTATCGGATTCGATTAGGTGCAACAATTGATTGTGCTCGATTTTTGTTACAACAAGGTCTTCCATTTCGTGGACATGATGAAACTGAAGATTCAAAAAATCAAGGTAACTTTCTTGAACTCCTACAATGGTTATGCAACCATAATAAAGATATTGAAGCCGTTTCTTTGAAAAATGCTCCAGAAAACTTGAAATTGACTGCACCAGACATCCAAAAAAATATTGTGAATTGTATTGCAGTAGAAATTATCAATTCAATCATACAAGATATTGGTGATAAGTTGTTTTCAATTTTGATTGATGAGTTGAAGGATATATCTTCAAAGGAGCAAATGTCAATTGTGTTAAGATATGTAGACAAAGGGTGTGTGATTGAGCGATTTGTCGGTATTGTACATGTTACCGATACAAGTTCTTTATCACTTAAAGAAGCTATTGATGGATTCTTTTCTATACATGGATTAAGTATGACAAGTTTGCATGGACAAGGTTATGATGGAGCAAGCAATATGCAAGGAGAATTTAATGGATTGAAAACATTAATTTTGAGAGAAAATGAATGTGCATTTTAA

mRNA sequence

ATGTCTAATCAAACAAGAATTGACTATCGGATTCGATTAGGTGCAACAATTGATTGTGCTCGATTTTTGTTACAACAAGGTCTTCCATTTCGTGGACATGATGAAACTGAAGATTCAAAAAATCAAGGTAACTTTCTTGAACTCCTACAATGGTTATGCAACCATAATAAAGATATTGAAGCCGTTTCTTTGAAAAATGCTCCAGAAAACTTGAAATTGACTGCACCAGACATCCAAAAAAATATTGTGAATTGTATTGCAGTAGAAATTATCAATTCAATCATACAAGATATTGGTGATAAGTTGTTTTCAATTTTGATTGATGAGTTGAAGGATATATCTTCAAAGGAGCAAATGTCAATTGTGTTAAGATATGTAGACAAAGGGTGTGTGATTGAGCGATTTGTCGGTATTGTACATGTTACCGATACAAGTTCTTTATCACTTAAAGAAGCTATTGATGGATTCTTTTCTATACATGGATTAAGTATGACAAGTTTGCATGGACAAGGTTATGATGGAGCAAGCAATATGCAAGGAGAATTTAATGGATTGAAAACATTAATTTTGAGAGAAAATGAATGTGCATTTTAA

Coding sequence (CDS)

ATGTCTAATCAAACAAGAATTGACTATCGGATTCGATTAGGTGCAACAATTGATTGTGCTCGATTTTTGTTACAACAAGGTCTTCCATTTCGTGGACATGATGAAACTGAAGATTCAAAAAATCAAGGTAACTTTCTTGAACTCCTACAATGGTTATGCAACCATAATAAAGATATTGAAGCCGTTTCTTTGAAAAATGCTCCAGAAAACTTGAAATTGACTGCACCAGACATCCAAAAAAATATTGTGAATTGTATTGCAGTAGAAATTATCAATTCAATCATACAAGATATTGGTGATAAGTTGTTTTCAATTTTGATTGATGAGTTGAAGGATATATCTTCAAAGGAGCAAATGTCAATTGTGTTAAGATATGTAGACAAAGGGTGTGTGATTGAGCGATTTGTCGGTATTGTACATGTTACCGATACAAGTTCTTTATCACTTAAAGAAGCTATTGATGGATTCTTTTCTATACATGGATTAAGTATGACAAGTTTGCATGGACAAGGTTATGATGGAGCAAGCAATATGCAAGGAGAATTTAATGGATTGAAAACATTAATTTTGAGAGAAAATGAATGTGCATTTTAA

Protein sequence

MSNQTRIDYRIRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIEAVSLKNAPENLKLTAPDIQKNIVNCIAVEIINSIIQDIGDKLFSILIDELKDISSKEQMSIVLRYVDKGCVIERFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQGEFNGLKTLILRENECAF
Homology
BLAST of Cmc04g0092671 vs. NCBI nr
Match: XP_011658426.2 (zinc finger MYM-type protein 1 [Cucumis sativus])

HSP 1 Score: 337.0 bits (863), Expect = 1.1e-88
Identity = 171/197 (86.80%), Postives = 180/197 (91.37%), Query Frame = 0

Query: 1   MSNQTRIDYRIRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIE 60
           MS+Q +IDY IRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNF ELLQW  N+NK IE
Sbjct: 1   MSDQAKIDYWIRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNFFELLQWF-NYNKHIE 60

Query: 61  AVSLKNAPENLKLTAPDIQKNIVNCIAVEIINSIIQDIGDKLFSILIDELKDISSKEQMS 120
           AVSL+NAPENLKLTAPDIQK+IVNCI V+I+N II D GDKL SILIDELKDISSKEQMS
Sbjct: 61  AVSLRNAPENLKLTAPDIQKDIVNCIGVKIVNGIIGDNGDKLLSILIDELKDISSKEQMS 120

Query: 121 IVLRYVDKGCVIERFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQG 180
           IVLRYVDKGCVIERFVGI+HVT+TS LSLKEAI  FFSIHGLSM SL GQGYDGASNMQG
Sbjct: 121 IVLRYVDKGCVIERFVGIIHVTNTSLLSLKEAITRFFSIHGLSMASLRGQGYDGASNMQG 180

Query: 181 EFNGLKTLILRENECAF 198
           EFNGLK LILRENECAF
Sbjct: 181 EFNGLKILILRENECAF 196

BLAST of Cmc04g0092671 vs. NCBI nr
Match: XP_008465647.1 (PREDICTED: uncharacterized protein LOC103503287, partial [Cucumis melo])

HSP 1 Score: 327.0 bits (837), Expect = 1.1e-85
Identity = 166/190 (87.37%), Postives = 173/190 (91.05%), Query Frame = 0

Query: 1   MSNQTRIDYRIRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIE 60
           MSNQ RIDYRIRLGATIDCARFLLQQGLPFR HDETEDSKNQGNFLELLQWLCNHNKDIE
Sbjct: 1   MSNQARIDYRIRLGATIDCARFLLQQGLPFRRHDETEDSKNQGNFLELLQWLCNHNKDIE 60

Query: 61  AVSLKNAPENLKLTAPDIQKNIVNCIAVEIINSIIQDIGDKLFSILIDELKDISSKEQMS 120
           A+SLKNAPENLKLTAPDIQK+IVNCIAVEI+NSIIQDIGDKLFSILIDE KDISSKEQMS
Sbjct: 61  AISLKNAPENLKLTAPDIQKDIVNCIAVEIVNSIIQDIGDKLFSILIDESKDISSKEQMS 120

Query: 121 IVLRYVDKGCVIERFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQG 180
           IVLRYVDKGCVI+RFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSL GQ     +    
Sbjct: 121 IVLRYVDKGCVIKRFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLRGQALVAIAKNHV 180

Query: 181 EFNGLKTLIL 191
           E  GL  L++
Sbjct: 181 EVAGLFLLVV 190

BLAST of Cmc04g0092671 vs. NCBI nr
Match: XP_008245511.1 (PREDICTED: zinc finger MYM-type protein 1-like [Prunus mume])

HSP 1 Score: 288.9 bits (738), Expect = 3.3e-74
Identity = 143/196 (72.96%), Postives = 168/196 (85.71%), Query Frame = 0

Query: 2   SNQTRIDYRIRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIEA 61
           SNQ RIDYR RLGA++  +R LLQQGLPFRGHDE+E+S NQGNFL  L+WLC  N DI+A
Sbjct: 182 SNQDRIDYRTRLGASVGVSRILLQQGLPFRGHDESENSTNQGNFLAFLRWLCRFNDDIKA 241

Query: 62  VSLKNAPENLKLTAPDIQKNIVNCIAVEIINSIIQDIGDKLFSILIDELKDISSKEQMSI 121
           V+LKNAPEN+KLT+PDIQK+I + I+ EIIN+II+DIGD LF+IL+DE  D+SSKE M+I
Sbjct: 242 VTLKNAPENMKLTSPDIQKDISSAISTEIINAIIRDIGDSLFAILVDESCDMSSKEHMAI 301

Query: 122 VLRYVDKGCVIERFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQGE 181
           VLRYVDKG VIERFVGIVHVTDT S SLK A+D FFS HGLS++ L GQGYDGASNM+GE
Sbjct: 302 VLRYVDKGKVIERFVGIVHVTDTKSSSLKLAVDDFFSRHGLSISRLRGQGYDGASNMRGE 361

Query: 182 FNGLKTLILRENECAF 198
           F+GLKTLIL EN+ AF
Sbjct: 362 FSGLKTLILNENDSAF 377

BLAST of Cmc04g0092671 vs. NCBI nr
Match: XP_024155975.1 (zinc finger MYM-type protein 1-like [Rosa chinensis])

HSP 1 Score: 283.1 bits (723), Expect = 1.8e-72
Identity = 134/196 (68.37%), Postives = 171/196 (87.24%), Query Frame = 0

Query: 2   SNQTRIDYRIRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIEA 61
           ++Q RIDY+ RL A+I   R LL+QGLPFRGHDE+E+S N+GNFLE+L+WLC +N+DI+A
Sbjct: 186 TSQDRIDYQTRLSASIGVVRILLKQGLPFRGHDESENSNNRGNFLEILEWLCGYNEDIKA 245

Query: 62  VSLKNAPENLKLTAPDIQKNIVNCIAVEIINSIIQDIGDKLFSILIDELKDISSKEQMSI 121
           V+LKNAPENLKLT+PDIQK+IV+ I++EI+N+I  ++GD LF+IL+DE +D+SSKEQM+I
Sbjct: 246 VTLKNAPENLKLTSPDIQKDIVSAISIEIVNTIASELGDSLFAILVDESRDMSSKEQMAI 305

Query: 122 VLRYVDKGCVIERFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQGE 181
           VLRYVD G VIERFVGI HVT+T++++LKEAID F   HGLS++ L GQGYDGASNM+GE
Sbjct: 306 VLRYVDDGNVIERFVGIEHVTNTNAITLKEAIDDFLCRHGLSISRLRGQGYDGASNMRGE 365

Query: 182 FNGLKTLILRENECAF 198
            NGLKTLIL EN+CAF
Sbjct: 366 LNGLKTLILNENKCAF 381

BLAST of Cmc04g0092671 vs. NCBI nr
Match: XP_024172313.1 (zinc finger MYM-type protein 1-like [Rosa chinensis])

HSP 1 Score: 280.0 bits (715), Expect = 1.5e-71
Identity = 133/196 (67.86%), Postives = 170/196 (86.73%), Query Frame = 0

Query: 2   SNQTRIDYRIRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIEA 61
           ++Q RIDY+ RL A+I   R LL+QGLPF GHDE+E+S N+GNFLE+L+WLC +N+DI+A
Sbjct: 186 TSQDRIDYQTRLSASIGVVRILLKQGLPFCGHDESENSNNRGNFLEILEWLCGYNEDIKA 245

Query: 62  VSLKNAPENLKLTAPDIQKNIVNCIAVEIINSIIQDIGDKLFSILIDELKDISSKEQMSI 121
           V+LKNAPENLKLT+PDIQK+IV+ I++EI+N+I  ++GD LF+IL+DE +D+SSKEQM+I
Sbjct: 246 VTLKNAPENLKLTSPDIQKDIVSAISIEIVNTIASELGDSLFAILVDESRDMSSKEQMAI 305

Query: 122 VLRYVDKGCVIERFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQGE 181
           VLRYVD G VIERFVGI HVT+T++++LKEAID F   HGLS++ L GQGYDGASNM+GE
Sbjct: 306 VLRYVDDGNVIERFVGIEHVTNTNAITLKEAIDDFLCRHGLSISRLRGQGYDGASNMRGE 365

Query: 182 FNGLKTLILRENECAF 198
            NGLKTLIL EN+CAF
Sbjct: 366 LNGLKTLILNENKCAF 381

BLAST of Cmc04g0092671 vs. ExPASy Swiss-Prot
Match: Q5SVZ6 (Zinc finger MYM-type protein 1 OS=Homo sapiens OX=9606 GN=ZMYM1 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.4e-19
Identity = 60/176 (34.09%), Postives = 94/176 (53.41%), Query Frame = 0

Query: 22  FLLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIEAVSLKNAPENLKLTAPDIQKN 81
           FL +Q LP RG+D++  S N+GNFLELL+     +K  E   L N+  +    +  IQ +
Sbjct: 563 FLGKQCLPLRGNDQSVSSVNKGNFLELLEMRAK-DKGEETFRLMNSQVDF-YNSTQIQSD 622

Query: 82  IVNCIAVEIINSIIQDIGD-KLFSILIDELKDISSKEQMSIVLRYVDKG----CVIERFV 141
           I+  I  E++  I+ +I D   FSI+ DE  + + KEQ+SI +RY  K      + ERF+
Sbjct: 623 IIEIIKTEMLQDIVNEINDSSAFSIICDETINSAMKEQLSICVRYPQKSSKAILIKERFL 682

Query: 142 GIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQGEFNGLKTLILRE 193
           G V   + +   L   I  +    G+ M  +HGQ YD  +N++ +FN +     +E
Sbjct: 683 GFVDTEEMTGTHLHRTIKTYLQQIGVDMDKIHGQAYDSTTNLKIKFNKIAAEFKKE 736

BLAST of Cmc04g0092671 vs. ExPASy TrEMBL
Match: A0A1S3CPC9 (uncharacterized protein LOC103503287 OS=Cucumis melo OX=3656 GN=LOC103503287 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.3e-86
Identity = 166/190 (87.37%), Postives = 173/190 (91.05%), Query Frame = 0

Query: 1   MSNQTRIDYRIRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIE 60
           MSNQ RIDYRIRLGATIDCARFLLQQGLPFR HDETEDSKNQGNFLELLQWLCNHNKDIE
Sbjct: 1   MSNQARIDYRIRLGATIDCARFLLQQGLPFRRHDETEDSKNQGNFLELLQWLCNHNKDIE 60

Query: 61  AVSLKNAPENLKLTAPDIQKNIVNCIAVEIINSIIQDIGDKLFSILIDELKDISSKEQMS 120
           A+SLKNAPENLKLTAPDIQK+IVNCIAVEI+NSIIQDIGDKLFSILIDE KDISSKEQMS
Sbjct: 61  AISLKNAPENLKLTAPDIQKDIVNCIAVEIVNSIIQDIGDKLFSILIDESKDISSKEQMS 120

Query: 121 IVLRYVDKGCVIERFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQG 180
           IVLRYVDKGCVI+RFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSL GQ     +    
Sbjct: 121 IVLRYVDKGCVIKRFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLRGQALVAIAKNHV 180

Query: 181 EFNGLKTLIL 191
           E  GL  L++
Sbjct: 181 EVAGLFLLVV 190

BLAST of Cmc04g0092671 vs. ExPASy TrEMBL
Match: A0A6P5RGN5 (zinc finger MYM-type protein 1-like OS=Prunus avium OX=42229 GN=LOC110744291 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 9.2e-70
Identity = 133/197 (67.51%), Postives = 164/197 (83.25%), Query Frame = 0

Query: 2   SNQTRIDYRIRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIEA 61
           S+Q+RIDYRIRL A++DC RFLL+QGL FRGHDE+EDS NQGNFLELLQ+  +HN+++ A
Sbjct: 178 SHQSRIDYRIRLNASVDCIRFLLRQGLAFRGHDESEDSSNQGNFLELLQFFVDHNEEVRA 237

Query: 62  VSLKNAPENLKLTAPDIQKNIVNCIAVEIINSIIQDIGDKLFSILIDELKDISSKEQMSI 121
           V+LKNAPENLK+T+P IQK+IVN  AVE  ++II+D+GD  FSIL+DE +D+S K+QM +
Sbjct: 238 VALKNAPENLKVTSPKIQKDIVNAAAVETTDAIIRDMGDAFFSILVDESRDVSVKKQMIV 297

Query: 122 VLRYVD-KGCVIERFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQG 181
           + RYVD KGCVIERF+GI HVT T++ SLK +ID  FS H LSM  L GQGYDG SNM G
Sbjct: 298 MFRYVDKKGCVIERFIGIEHVTSTTAESLKASIDSLFSRHKLSMCRLRGQGYDGTSNMSG 357

Query: 182 EFNGLKTLILRENECAF 198
           EFNGLKTLI+RENE A+
Sbjct: 358 EFNGLKTLIMRENESAY 374

BLAST of Cmc04g0092671 vs. ExPASy TrEMBL
Match: A0A6P5RJS3 (zinc finger MYM-type protein 1-like OS=Prunus avium OX=42229 GN=LOC110745304 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.8e-69
Identity = 133/196 (67.86%), Postives = 163/196 (83.16%), Query Frame = 0

Query: 2   SNQTRIDYRIRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIEA 61
           S+Q R DYRI+L A+IDC R+LL+QG+ FRGHDE++DS N+GNFLELL W  N N++++ 
Sbjct: 177 SHQDRSDYRIQLNASIDCIRYLLRQGMAFRGHDESDDSNNKGNFLELLHWYSNRNEEVKK 236

Query: 62  VSLKNAPENLKLTAPDIQKNIVNCIAVEIINSIIQDIGDKLFSILIDELKDISSKEQMSI 121
           V LKNAP NLKLT+PDIQK+IVN  A+E +N II D+G+ LFSILIDE  DIS KEQM+I
Sbjct: 237 VVLKNAPANLKLTSPDIQKDIVNAAAIETLNKIIGDVGNSLFSILIDESCDISGKEQMAI 296

Query: 122 VLRYVDKGCVIERFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQGE 181
           VLRYV KG VIERFVG+ HV DT++LSLK+AID FFS + LS++ L GQGYDGASNM+GE
Sbjct: 297 VLRYVCKGHVIERFVGVEHVNDTTALSLKKAIDNFFSRNKLSISRLRGQGYDGASNMRGE 356

Query: 182 FNGLKTLILRENECAF 198
           FNGLKT IL+ENE A+
Sbjct: 357 FNGLKTHILKENESAY 372

BLAST of Cmc04g0092671 vs. ExPASy TrEMBL
Match: A0A2P5BWS1 (DUF4371 domain-containing protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_305960 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.7e-68
Identity = 137/197 (69.54%), Postives = 164/197 (83.25%), Query Frame = 0

Query: 2   SNQTRIDYRIRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIEA 61
           S Q R  YRIRL A+  C RFLL+QGL FRG DE+EDSKNQGNFLELL++L +HN +I+ 
Sbjct: 72  SKQMRNKYRIRLSASTACVRFLLRQGLAFRGRDESEDSKNQGNFLELLKFLADHNDEIKD 131

Query: 62  VSLKNAPENLKLTAPDIQKNIVNCIAVEIINSIIQDIGDKLFSILIDELKDISSKEQMSI 121
           V+LKNAP+NLKLT+PDIQK IV+  AVE IN II+DIGD LFSIL+DE +D+S KEQMS+
Sbjct: 132 VTLKNAPDNLKLTSPDIQKEIVHASAVETINVIIKDIGDALFSILVDESRDVSIKEQMSV 191

Query: 122 VLRYV-DKGCVIERFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQG 181
           VLRYV + G VIERF+GIVHV +T++LSLK AI+  FS H LS++ L GQGYDGASNMQG
Sbjct: 192 VLRYVNNNGHVIERFIGIVHVPNTTALSLKTAINELFSRHNLSVSRLRGQGYDGASNMQG 251

Query: 182 EFNGLKTLILRENECAF 198
           EFNGLKTLIL+EN CA+
Sbjct: 252 EFNGLKTLILKENPCAY 268

BLAST of Cmc04g0092671 vs. ExPASy TrEMBL
Match: A0A2N9IXQ3 (TTF-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56922 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 129/197 (65.48%), Postives = 166/197 (84.26%), Query Frame = 0

Query: 2   SNQTRIDYRIRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIEA 61
           ++Q RI+YR RL A+IDC RFLL+QGL FRGHDE+EDS NQGNFLELL++L +HN+DI+A
Sbjct: 312 TDQARIEYRTRLNASIDCIRFLLRQGLAFRGHDESEDSSNQGNFLELLKFLADHNEDIKA 371

Query: 62  VSLKNAPENLKLTAPDIQKNIVNCIAVEIINSIIQDIGDKLFSILIDELKDISSKEQMSI 121
           V+L+NAPEN  + +P IQK+IV+  AVE  N+II ++GD  FS+LIDE +DIS+KEQM++
Sbjct: 372 VTLRNAPENNMMISPAIQKDIVSAAAVETSNAIIMELGDAFFSVLIDESRDISTKEQMAV 431

Query: 122 VLRYVD-KGCVIERFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQG 181
            LRYVD KG V+ERF+GI HVTDT++LSLK A++  F  HGLS++ L GQGYDGASNMQG
Sbjct: 432 ALRYVDKKGHVVERFLGIEHVTDTTALSLKAAVEDLFCRHGLSLSRLRGQGYDGASNMQG 491

Query: 182 EFNGLKTLILRENECAF 198
           +FNGLKTLI++ENE A+
Sbjct: 492 QFNGLKTLIMKENESAY 508

BLAST of Cmc04g0092671 vs. TAIR 10
Match: AT3G29763.1 (General transcription factor 2-related zinc finger protein )

HSP 1 Score: 233.4 bits (594), Expect = 1.5e-61
Identity = 111/197 (56.35%), Postives = 156/197 (79.19%), Query Frame = 0

Query: 2   SNQTRIDYRIRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIEA 61
           +N  + DYRIRL A+ID +R LL QGLPFRGHDE+E+S N+GNFLELL+++   N+ ++ 
Sbjct: 31  TNVVKNDYRIRLNASIDVSRHLLHQGLPFRGHDESEESTNKGNFLELLKYIAGQNEVVKK 90

Query: 62  VSLKNAPENLKLTAPDIQKNIVNCIAVEIINSIIQDIGDKLFSILIDELKDISSKEQMSI 121
           V LKNAP+N ++T+P IQK+IV+C + E+  SII+++ + +F +L+DE  D S KEQM++
Sbjct: 91  VVLKNAPKNNQMTSPPIQKDIVHCFSEEVTRSIIEEMDNDVFGLLVDESADASDKEQMAV 150

Query: 122 VLRYVDK-GCVIERFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQG 181
           V R+VDK G V ERF+G++HV +TSSLSLK AID  F+ +GLS+  L G+GYDGASNM+G
Sbjct: 151 VFRFVDKYGVVKERFIGVIHVQETSSLSLKSAIDSLFAKYGLSLKKLRGKGYDGASNMKG 210

Query: 182 EFNGLKTLILRENECAF 198
           +FNGL++LIL+EN  A+
Sbjct: 211 KFNGLRSLILKENSSAY 227

BLAST of Cmc04g0092671 vs. TAIR 10
Match: AT1G19260.1 (TTF-type zinc finger protein with HAT dimerisation domain )

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-59
Identity = 109/191 (57.07%), Postives = 151/191 (79.06%), Query Frame = 0

Query: 8   DYRIRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIEAVSLKNA 67
           DYRI L A+ID +R LL QGLPFRGHDE+E+S N+GNF+ELL++    N+ ++ V LKNA
Sbjct: 169 DYRIWLNASIDVSRHLLHQGLPFRGHDESEESTNKGNFVELLKYTAGQNEVVKKVVLKNA 228

Query: 68  PENLKLTAPDIQKNIVNCIAVEIINSIIQDIGDKLFSILIDELKDISSKEQMSIVLRYVD 127
           P+N ++T+P IQK+IV+C + E+  SII+++ + +F +L+DE  D S KEQM++V R+VD
Sbjct: 229 PKNNQMTSPPIQKDIVHCFSKEVTRSIIEEMDNDVFGLLVDESADASDKEQMAVVFRFVD 288

Query: 128 K-GCVIERFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQGEFNGLK 187
           K G V ERF+G++HV +TSSLSLK AID  F+ +GLS+  L GQGYDGASNM+GEFNGL+
Sbjct: 289 KYGVVKERFIGVIHVQETSSLSLKSAIDSLFAKYGLSLKKLRGQGYDGASNMKGEFNGLR 348

Query: 188 TLILRENECAF 198
           +LIL+E+  A+
Sbjct: 349 SLILKESSSAY 359

BLAST of Cmc04g0092671 vs. TAIR 10
Match: AT2G06541.1 (TTF-type zinc finger protein with HAT dimerisation domain )

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-55
Identity = 102/191 (53.40%), Postives = 141/191 (73.82%), Query Frame = 0

Query: 8   DYRIRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIEAVSLKNA 67
           +YRIRL A+IDC R+L++QGL FRGHDE+ DS N+GNFLEL+++    N+ +  V L+NA
Sbjct: 102 EYRIRLNASIDCCRYLVRQGLTFRGHDESVDSANRGNFLELVKYTAGQNEVVSKVVLENA 161

Query: 68  PENLKLTAPDIQKNIVNCIAVEIINSIIQDIGDKLFSILIDELKDISSKEQMSIVLRYVD 127
           P+N ++  P IQ++IV+C   E+I SIIQ++   +F +++DE  DI  KEQM +V R+VD
Sbjct: 162 PKNNQMVCPKIQRDIVHCFVEEVIRSIIQEVDHDVFCLMVDESADIFDKEQMVVVFRFVD 221

Query: 128 KGCVI-ERFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQGEFNGLK 187
           K   + ERF+G++HV +T S  LK AID  F+ HGLS+  + GQ YDGASNM+GEFNGL+
Sbjct: 222 KHATVKERFIGLIHVKETFSAFLKCAIDSLFAKHGLSIKQIRGQDYDGASNMKGEFNGLR 281

Query: 188 TLILRENECAF 198
            LILREN  A+
Sbjct: 282 YLILRENSSAY 292

BLAST of Cmc04g0092671 vs. TAIR 10
Match: AT2G06541.2 (TTF-type zinc finger protein with HAT dimerisation domain )

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-55
Identity = 102/191 (53.40%), Postives = 141/191 (73.82%), Query Frame = 0

Query: 8   DYRIRLGATIDCARFLLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIEAVSLKNA 67
           +YRIRL A+IDC R+L++QGL FRGHDE+ DS N+GNFLEL+++    N+ +  V L+NA
Sbjct: 102 EYRIRLNASIDCCRYLVRQGLTFRGHDESVDSANRGNFLELVKYTAGQNEVVSKVVLENA 161

Query: 68  PENLKLTAPDIQKNIVNCIAVEIINSIIQDIGDKLFSILIDELKDISSKEQMSIVLRYVD 127
           P+N ++  P IQ++IV+C   E+I SIIQ++   +F +++DE  DI  KEQM +V R+VD
Sbjct: 162 PKNNQMVCPKIQRDIVHCFVEEVIRSIIQEVDHDVFCLMVDESADIFDKEQMVVVFRFVD 221

Query: 128 KGCVI-ERFVGIVHVTDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQGEFNGLK 187
           K   + ERF+G++HV +T S  LK AID  F+ HGLS+  + GQ YDGASNM+GEFNGL+
Sbjct: 222 KHATVKERFIGLIHVKETFSAFLKCAIDSLFAKHGLSIKQIRGQDYDGASNMKGEFNGLR 281

Query: 188 TLILRENECAF 198
            LILREN  A+
Sbjct: 282 YLILRENSSAY 292

BLAST of Cmc04g0092671 vs. TAIR 10
Match: AT4G09660.1 (CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 839 Blast hits to 796 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 438; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 205.7 bits (522), Expect = 3.5e-53
Identity = 98/171 (57.31%), Postives = 138/171 (80.70%), Query Frame = 0

Query: 23  LLQQGLPFRGHDETEDSKNQGNFLELLQWLCNHNKDIEAVSLKNAPENLKLTAPDIQKNI 82
           L++QGL FRGHDE+E+S N+GNFLELL++    N+ ++ V LKNAP+N ++T+P IQK+I
Sbjct: 148 LMRQGLSFRGHDESEESTNKGNFLELLKYTAGQNEVVKKVVLKNAPKNNQMTSPPIQKDI 207

Query: 83  VNCIAVEIINSIIQDIGDKLFSILIDELKDISSKEQMSIVLRYVDK-GCVIERFVGIVHV 142
           V+C + E+  SII+++ + +F +L+DE  D S+KEQM++V R+VDK G V ERF+G++HV
Sbjct: 208 VHCFSEEVTRSIIEEMDNDVFGLLVDESADASNKEQMTVVFRFVDKYGVVKERFIGVIHV 267

Query: 143 TDTSSLSLKEAIDGFFSIHGLSMTSLHGQGYDGASNMQGEFNGLKTLILRE 193
            +TSSLSLK AID  F+ +GLS+  L GQGYDGASNM+GEFNGL++LIL+E
Sbjct: 268 KETSSLSLKSAIDSLFAKYGLSLKKLRGQGYDGASNMKGEFNGLRSLILKE 318

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011658426.21.1e-8886.80zinc finger MYM-type protein 1 [Cucumis sativus][more]
XP_008465647.11.1e-8587.37PREDICTED: uncharacterized protein LOC103503287, partial [Cucumis melo][more]
XP_008245511.13.3e-7472.96PREDICTED: zinc finger MYM-type protein 1-like [Prunus mume][more]
XP_024155975.11.8e-7268.37zinc finger MYM-type protein 1-like [Rosa chinensis][more]
XP_024172313.11.5e-7167.86zinc finger MYM-type protein 1-like [Rosa chinensis][more]
Match NameE-valueIdentityDescription
Q5SVZ65.4e-1934.09Zinc finger MYM-type protein 1 OS=Homo sapiens OX=9606 GN=ZMYM1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A1S3CPC95.3e-8687.37uncharacterized protein LOC103503287 OS=Cucumis melo OX=3656 GN=LOC103503287 PE=... [more]
A0A6P5RGN59.2e-7067.51zinc finger MYM-type protein 1-like OS=Prunus avium OX=42229 GN=LOC110744291 PE=... [more]
A0A6P5RJS37.8e-6967.86zinc finger MYM-type protein 1-like OS=Prunus avium OX=42229 GN=LOC110745304 PE=... [more]
A0A2P5BWS11.7e-6869.54DUF4371 domain-containing protein (Fragment) OS=Trema orientale OX=63057 GN=TorR... [more]
A0A2N9IXQ31.1e-6765.48TTF-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56922... [more]
Match NameE-valueIdentityDescription
AT3G29763.11.5e-6156.35General transcription factor 2-related zinc finger protein [more]
AT1G19260.11.1e-5957.07TTF-type zinc finger protein with HAT dimerisation domain [more]
AT2G06541.11.7e-5553.40TTF-type zinc finger protein with HAT dimerisation domain [more]
AT2G06541.21.7e-5553.40TTF-type zinc finger protein with HAT dimerisation domain [more]
AT4G09660.13.5e-5357.31CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Ara... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025398Domain of unknown function DUF4371PFAMPF14291DUF4371coord: 5..184
e-value: 3.3E-60
score: 203.6
NoneNo IPR availablePANTHERPTHR11697:SF206GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN-RELATEDcoord: 9..197
NoneNo IPR availablePANTHERPTHR11697GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEINcoord: 9..197

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0092671.1Cmc04g0092671.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0046983 protein dimerization activity